Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Forward (+)

6198809 .. 6203453

Gene Structure 4645 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g10390.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGTGAAGAACTGTGGTGACTATATCCATTTTCAAATTGCAGAGAGGAATATACTTGGGGAGATGGTAAAAATTGTGAAGAAGAAGACAGATATGCAGGTAAGGGATAAGATCTTGATACTGGTGGACTCTTGGCAAACAGCATTTGGTGGGCCTTCAGGAAAGCATCCTCAGTACTATTGGGCATATGATGAGCTTAGGCGGTCTGGAGTAGAATTTCCTAAGCATTCAATGGATGCAGCTCCAATGTTTGCACCACCTGTCACAAATTCAATACCAAGACCTTCTCAAGCTGGATATGGAATGCCTAGCAATTCCTCAAGAAGGCTCGATGAGACAATGGCTACAGAAAATGAAAATTTGACTTTGTCAAGCCTGGATTCTATGAGGGATGTTATGGAGCTCTTGAGTGACATGCTGCAAGCTGTGAATCCTAATGACCGATCGGCTGTAAAAGATGAAGTCATAGTTGAACTTGTCAACCGTTGTCGTGGCAACCAGAAAAAGCTGATTCAGATGCTAACTACCACTGGAGATGAAGAACTTCTTGCCCGAGGTCTCGAATTAAACGACAGTCTGCAAAGTTTGCTTGCAAAGAATGATGCTATAGCTTCTGGTTTACCTTTGCCAACTACGAACTTAAGTCCTCAACCAGCTGACATGGCTGCATCCAGTTCGAAGCACACTGAAACTAAAGACTCCAGCACAAGTGAGTCCAGTCCAAGACCTAAAGCTAGTCCATCTGCACCAGTCGCTTCCTCATCAAGGGTCCAATTTGATGAAGATGAAGAAGAGGAAGATGAATTTGCACAGCTAGCTCGAAGGCATTCCAGACAACAGTCTTCCAAGCCTGCTGAAAGCACGCCAAATGGTACTGATGGAGGTTTGGCATTAGTGAGCATGGATCCGTCTCCATCTGCATCAGGGTCTGTCCCATGCAATGCGTTAGTTCTTTCCGATCCACCTGCTCCAACTAAGACTACACAAGAGCAGAACATAATTGATCTACTGAGTATCACTTTGTCGACAACAGCAAACTCCAGCGAAACCCCTCCCCCTCCTCCAGCATCTGTCCCTCCCCCGGTTCATGCATCAAACAGTAATGAGCATCAGATGCCTGCTTCCCCTGCTTCACAAGGCAATCCGTATCCTTCCCAAGCTTATCCGGGAAATCCTGGGCTTGGATCCTACAACAGCTATGTTGTTCCTTGGGCCCAGCCTCAGGCCCAGCAAACTCAATTTAGACCGCAATTACAGCCACAGCCGCAGATGCAACCTCAATTCCAATCACAGTTTCAACCGCAATATCCCCAATACTCTTCTGCCTACCCTGCGCCACCATGGGCAGCTTCACCTAGTTATCCTAACAACCAAAATTATATGTCTGCCAGTAGTACATATGCGACTCCTCACACCAACACAACAGCTTATACTCCAGCGCAGGGAGCAAGGCCTTTGCAGCAGTATAATTCCTTCCCTGCGAGGGGAACCACTGGGTCAGATAACCACGGAGGTTTCCCAACAAATTCTGGTCCTAGGAGCCCTGCGACCTCTGGAGGACAGAAGCCTTTTATTCCCTCCTACCGATTATTTGAAGATCTGAATGTTTTTGGCAATGCTGACGGAAAGCTCAAGGTGGCAAACGGCAACTCATCATCTGGCTTCCCTGGAACTCCAGGCCAAGGTATGGTTGGCGGGAGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

569

Amino Acids

61.18

Weight (kDa)

5.58

Isoelectric Point (pI)

61.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	1 - 54	2.9e-08	VHS domain
GAT	PF03127	132 - 204	5.5e-18	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	973
Acc36I	ACCTGC	2 cut(s)	88, 973
AccB7I	CCANNNNNTGG	1 cut(s)	1687
AccI	GTMKAC	1 cut(s)	1025
AciI	CCGC	5 cut(s)	202, 1247, 1265, 1301, 1695
AclWI	GGATC	5 cut(s)	899, 912, 953, 1179, 1192
AcsI	RAATTY	5 cut(s)	215, 268, 358, 803, 1525
AcuI	CTGAAG	1 cut(s)	141
AfaI	GTAC	3 cut(s)	176, 874, 1396
AflII	CTTAAG	1 cut(s)	640
AgsI	TTSAA	6 cut(s)	35, 231, 273, 473, 1298, 1595
AjnI	CCWGG	4 cut(s)	375, 1174, 1666, 1675
AjuI	GAANNNNNNNTTGG	2 cut(s)	1278, 1310
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	3 cut(s)	329, 563, 915
AlwI	GGATC	5 cut(s)	899, 912, 953, 1179, 1192
AlwNI	CAGNNNCTG	2 cut(s)	929, 1070
Ama87I	CYCGRG	1 cut(s)	552
AoxI	GGCC	5 cut(s)	152, 1212, 1224, 1451, 1678
ApaI	GGGCCC	1 cut(s)	1216
ApeKI	GCWGC	5 cut(s)	239, 418, 665, 1346, 1459
ApoI	RAATTY	5 cut(s)	215, 268, 358, 803, 1525
Asp700I	GAANNNNTTC	2 cut(s)	543, 826
AspA2I	CCTAGG	1 cut(s)	1535
AspLEI	GCGC	2 cut(s)	1336, 1441
AspS9I	GGNCC	6 cut(s)	152, 769, 1212, 1213, 1225, 1532
AsuC2I	CCSGG	2 cut(s)	1082, 1167
AsuHPI	GGTGA	3 cut(s)	16, 29, 1344
AsuII	TTCGAA	1 cut(s)	677
AsuNHI	GCTAGC	1 cut(s)	814
AvaI	CYCGRG	1 cut(s)	552
AvaII	GGWCC	2 cut(s)	769, 1532
AvrII	CCTAGG	1 cut(s)	1535
AxyI	CCTNAGG	1 cut(s)	1221
BaeGI	GKGCMC	1 cut(s)	1216
BamHI	GGATCC	2 cut(s)	904, 1184
BanII	GRGCYC	3 cut(s)	405, 1216, 1544
BarI	GAAGNNNNNNTAC	2 cut(s)	1457, 1489
BbsI	GAAGAC	2 cut(s)	92, 834
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	5 cut(s)	251, 405, 652, 1358, 1471
BccI	CCATC	4 cut(s)	58, 748, 872, 922
BceAI	ACGGC	1 cut(s)	1660
BcgI	CGANNNNNNTGC	4 cut(s)	657, 691, 947, 981
BciT130I	CCWGG	4 cut(s)	377, 1176, 1668, 1677
BciVI	GTATCC	1 cut(s)	1158
BcnI	CCSGG	2 cut(s)	1082, 1167
BcoDI	GTCTC	3 cut(s)	329, 563, 915
BfaI	CTAG	5 cut(s)	309, 735, 815, 1356, 1536
BfmI	CTRYAG	2 cut(s)	345, 606
BfrI	CTTAAG	1 cut(s)	640
BfuAI	ACCTGC	2 cut(s)	88, 973
BfuI	GTATCC	1 cut(s)	1158
BglII	AGATCT	2 cut(s)	111, 1597
BisI	GCNGC	6 cut(s)	240, 419, 666, 1265, 1347, 1460
BlnI	CCTAGG	1 cut(s)	1535
BlsI	GCNGC	6 cut(s)	241, 420, 667, 1266, 1348, 1461
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	6 cut(s)	377, 1082, 1167, 1176, 1668, 1677
Bme18I	GGWCC	2 cut(s)	769, 1532
BmeT110I	CYCGRG	1 cut(s)	552
BmgT120I	GGNCC	6 cut(s)	152, 769, 1212, 1213, 1225, 1532
BmiI	GGNNCC	6 cut(s)	770, 906, 1186, 1214, 1489, 1541
BmrFI	CCNGG	6 cut(s)	377, 1082, 1167, 1176, 1668, 1677
BmrI	ACTGGG	1 cut(s)	1503
BmtI	GCTAGC	1 cut(s)	818
BmuI	ACTGGG	1 cut(s)	1503
BoxI	GACNNNNGTC	1 cut(s)	838
BpiI	GAAGAC	2 cut(s)	92, 834
BpmI	CTGGAG	8 cut(s)	228, 552, 685, 1024, 1047, 1419, 1575, 1659
Bpu10I	CCTNAGC	2 cut(s)	197, 222
Bpu14I	TTCGAA	1 cut(s)	677
BpuEI	CTTGAG	4 cut(s)	273, 304, 427, 1616
BpuMI	CCSGG	2 cut(s)	1082, 1167
BsaI	GGTCTC	1 cut(s)	563
BsaJI	CCNNGG	9 cut(s)	553, 1080, 1175, 1208, 1340, 1507, 1535, 1666, 1681
Bse1I	ACTGG	7 cut(s)	126, 535, 672, 717, 749, 1389, 1498
Bse21I	CCTNAGG	1 cut(s)	1221
Bse3DI	GCAATG	2 cut(s)	946, 1621
BseBI	CCWGG	4 cut(s)	377, 1176, 1668, 1677
BseDI	CCNNGG	9 cut(s)	553, 1080, 1175, 1208, 1340, 1507, 1535, 1666, 1681
BseGI	GGATG	4 cut(s)	166, 241, 397, 668
BseMI	GCAATG	2 cut(s)	946, 1621
BseMII	CTCAG	3 cut(s)	185, 1001, 1235
BseNI	ACTGG	7 cut(s)	126, 535, 672, 717, 749, 1389, 1498
BseRI	GAGGAG	2 cut(s)	1050, 1398
BseSI	GKGCMC	1 cut(s)	1216
BseXI	GCAGC	5 cut(s)	251, 405, 652, 1358, 1471
BseYI	CCCAGC	2 cut(s)	1215, 1227
BsgI	GTGCAG	1 cut(s)	729
Bsh1285I	CGRYCG	1 cut(s)	446
BshFI	GGCC	5 cut(s)	154, 1214, 1226, 1453, 1680
BsiEI	CGRYCG	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	1 cut(s)	552
BsiSI	CCGG	2 cut(s)	1082, 1166
BslFI	GGGAC	2 cut(s)	917, 1058
BsmAI	GTCTC	3 cut(s)	329, 563, 915
BsmBI	CGTCTC	1 cut(s)	915
BsmFI	GGGAC	2 cut(s)	917, 1058
BsmI	GAATGC	3 cut(s)	226, 309, 826
BsnI	GGCC	5 cut(s)	154, 1214, 1226, 1453, 1680
Bso31I	GGTCTC	1 cut(s)	563
BsoBI	CYCGRG	1 cut(s)	552
Bsp119I	TTCGAA	1 cut(s)	677
Bsp120I	GGGCCC	1 cut(s)	1212
Bsp1286I	GDGCHC	3 cut(s)	405, 1216, 1544
Bsp143I	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
Bsp19I	CCATGG	1 cut(s)	1340
BspACI	CCGC	5 cut(s)	202, 1247, 1265, 1301, 1695
BspANI	GGCC	5 cut(s)	154, 1214, 1226, 1453, 1680
BspCNI	CTCAG	3 cut(s)	184, 1002, 1234
BspLI	GGNNCC	6 cut(s)	770, 906, 1186, 1214, 1489, 1541
BspMI	ACCTGC	2 cut(s)	88, 973
BspOI	GCTAGC	1 cut(s)	818
BspPI	GGATC	5 cut(s)	899, 912, 953, 1179, 1192
BspT104I	TTCGAA	1 cut(s)	677
BspTI	CTTAAG	1 cut(s)	640
BspTNI	GGTCTC	1 cut(s)	563
BsrDI	GCAATG	2 cut(s)	946, 1621
BsrI	ACTGG	7 cut(s)	126, 535, 672, 717, 749, 1389, 1498
BssECI	CCNNGG	9 cut(s)	553, 1080, 1175, 1208, 1340, 1507, 1535, 1666, 1681
BssMI	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
BssT1I	CCWWGG	4 cut(s)	1208, 1340, 1535, 1681
Bst2UI	CCWGG	4 cut(s)	377, 1176, 1668, 1677
Bst4CI	ACNGT	6 cut(s)	14, 485, 575, 840, 1100, 1293
Bst6I	CTCTTC	2 cut(s)	786, 1324
BstAFI	CTTAAG	1 cut(s)	640
BstAPI	GCANNNNNTGC	2 cut(s)	586, 1114
BstBI	TTCGAA	1 cut(s)	677
BstC8I	GCNNGC	6 cut(s)	423, 591, 816, 852, 863, 1119
BstDEI	CTNAG	6 cut(s)	171, 197, 222, 975, 1010, 1221
BstDSI	CCRYGG	2 cut(s)	1340, 1507
BstENI	CCTNNNNNAGG	2 cut(s)	322, 763
BstF5I	GGATG	4 cut(s)	166, 241, 397, 668
BstHHI	GCGC	2 cut(s)	1336, 1441
BstKTI	GATC	7 cut(s)	114, 446, 907, 961, 1006, 1187, 1600
BstMAI	GTCTC	3 cut(s)	329, 563, 915
BstMBI	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
BstMCI	CGRYCG	1 cut(s)	446
BstNI	CCWGG	4 cut(s)	377, 1176, 1668, 1677
BstNSI	RCATGY	1 cut(s)	418
BstPAI	GACNNNNGTC	1 cut(s)	838
BstSCI	CCNGG	6 cut(s)	375, 1080, 1165, 1174, 1666, 1675
BstSFI	CTRYAG	2 cut(s)	345, 606
BstSLI	GKGCMC	1 cut(s)	1216
BstV1I	GCAGC	5 cut(s)	251, 405, 652, 1358, 1471
BstV2I	GAAGAC	2 cut(s)	92, 834
BstX2I	RGATCY	4 cut(s)	111, 904, 1184, 1597
BstYI	RGATCY	4 cut(s)	111, 904, 1184, 1597
Bsu36I	CCTNAGG	1 cut(s)	1221
BsuI	GTATCC	1 cut(s)	1158
BsuRI	GGCC	5 cut(s)	154, 1214, 1226, 1453, 1680
BtgI	CCRYGG	2 cut(s)	1340, 1507
BtsCI	GGATG	4 cut(s)	166, 241, 397, 668
BtsIMutI	CAGTG	3 cut(s)	528, 684, 1491
BveI	ACCTGC	2 cut(s)	88, 973
Cac8I	GCNNGC	6 cut(s)	423, 591, 816, 852, 863, 1119
CaiI	CAGNNNCTG	2 cut(s)	929, 1070
CfoI	GCGC	2 cut(s)	1336, 1441
Cfr13I	GGNCC	6 cut(s)	152, 769, 1212, 1213, 1225, 1532
Csp6I	GTAC	3 cut(s)	175, 873, 1395
CviAII	CATG	6 cut(s)	415, 661, 901, 936, 1088, 1341
CviQI	GTAC	3 cut(s)	175, 873, 1395
DdeI	CTNAG	6 cut(s)	171, 197, 222, 975, 1010, 1221
DpnI	GATC	7 cut(s)	113, 445, 906, 960, 1005, 1186, 1599
DpnII	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
Eam1104I	CTCTTC	2 cut(s)	786, 1324
EarI	CTCTTC	2 cut(s)	786, 1324
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	4 cut(s)	1208, 1340, 1535, 1681
Eco147I	AGGCCT	1 cut(s)	1453
Eco24I	GRGCYC	3 cut(s)	405, 1216, 1544
Eco31I	GGTCTC	1 cut(s)	563
Eco47I	GGWCC	2 cut(s)	769, 1532
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	1 cut(s)	141
Eco81I	CCTNAGG	1 cut(s)	1221
Eco88I	CYCGRG	1 cut(s)	552
EcoICRI	GAGCTC	1 cut(s)	403
EcoNI	CCTNNNNNAGG	2 cut(s)	322, 763
EcoRII	CCWGG	4 cut(s)	375, 1174, 1666, 1675
EcoT14I	CCWWGG	4 cut(s)	1208, 1340, 1535, 1681
EcoT22I	ATGCAT	1 cut(s)	1093
EcoT38I	GRGCYC	3 cut(s)	405, 1216, 1544
ErhI	CCWWGG	4 cut(s)	1208, 1340, 1535, 1681
Esp3I	CGTCTC	1 cut(s)	915
FaeI	CATG	6 cut(s)	418, 664, 904, 939, 1091, 1344
FalI	AAGNNNNNCTT	2 cut(s)	531, 563
FaqI	GGGAC	2 cut(s)	917, 1058
FatI	CATG	6 cut(s)	414, 660, 900, 935, 1087, 1340
FauI	CCCGC	1 cut(s)	1688
FauNDI	CATATG	2 cut(s)	187, 1399
FblI	GTMKAC	1 cut(s)	1025
Fnu4HI	GCNGC	6 cut(s)	240, 419, 666, 1265, 1347, 1460
FokI	GGATG	4 cut(s)	153, 248, 404, 655
FriOI	GRGCYC	3 cut(s)	405, 1216, 1544
Fsp4HI	GCNGC	6 cut(s)	240, 419, 666, 1265, 1347, 1460
FspBI	CTAG	5 cut(s)	309, 735, 815, 1356, 1536
GlaI	GCGC	2 cut(s)	1335, 1440
GluI	GCNGC	6 cut(s)	240, 419, 666, 1265, 1347, 1460
GsaI	CCCAGC	2 cut(s)	1219, 1231
GsuI	CTGGAG	8 cut(s)	228, 552, 685, 1024, 1047, 1419, 1575, 1659
HaeIII	GGCC	5 cut(s)	154, 1214, 1226, 1453, 1680
HapII	CCGG	2 cut(s)	1082, 1166
HhaI	GCGC	2 cut(s)	1336, 1441
Hin1II	CATG	6 cut(s)	418, 664, 904, 939, 1091, 1344
Hin6I	GCGC	2 cut(s)	1334, 1439
HinP1I	GCGC	2 cut(s)	1334, 1439
HincII	GTYRAC	2 cut(s)	481, 1026
HindII	GTYRAC	2 cut(s)	481, 1026
HindIII	AAGCTT	1 cut(s)	1158
HinfI	GANTC	7 cut(s)	128, 380, 430, 511, 698, 713, 1405
HpaII	CCGG	2 cut(s)	1082, 1166
HphI	GGTGA	3 cut(s)	16, 29, 1344
Hpy166II	GTNNAC	4 cut(s)	127, 481, 620, 1026
Hpy188I	TCNGA	5 cut(s)	516, 958, 1113, 1501, 1602
Hpy188III	TCNNGA	8 cut(s)	115, 159, 207, 321, 406, 560, 831, 1554
Hpy8I	GTNNAC	4 cut(s)	127, 481, 620, 1026
HpyAV	CCTTC	6 cut(s)	165, 294, 318, 816, 1161, 1483
HpyCH4III	ACNGT	6 cut(s)	14, 485, 575, 840, 1100, 1293
HpyF3I	CTNAG	6 cut(s)	171, 197, 222, 975, 1010, 1221
Hsp92II	CATG	6 cut(s)	418, 664, 904, 939, 1091, 1344
HspAI	GCGC	2 cut(s)	1334, 1439
Kzo9I	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
LmnI	GCTCC	5 cut(s)	247, 400, 973, 1445, 1539
Lsp1109I	GCAGC	5 cut(s)	251, 405, 652, 1358, 1471
MaeI	CTAG	5 cut(s)	309, 735, 815, 1356, 1536
MaeIII	GTNAC	3 cut(s)	17, 262, 410
MalI	GATC	7 cut(s)	113, 445, 906, 960, 1005, 1186, 1599
MboI	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
MflI	RGATCY	4 cut(s)	111, 904, 1184, 1597
MhlI	GDGCHC	3 cut(s)	405, 1216, 1544
MlyI	GAGTC	4 cut(s)	122, 692, 722, 1399
MmeI	TCCRAC	1 cut(s)	995
Mph1103I	ATGCAT	1 cut(s)	1093
MroXI	GAANNNNTTC	2 cut(s)	543, 826
MseI	TTAA	2 cut(s)	566, 641
MspA1I	CMGCKG	1 cut(s)	656
MspCI	CTTAAG	1 cut(s)	640
MspI	CCGG	2 cut(s)	1082, 1166
MspR9I	CCNGG	6 cut(s)	377, 1082, 1167, 1176, 1668, 1677
Mva1269I	GAATGC	3 cut(s)	226, 309, 826
MvaI	CCWGG	4 cut(s)	377, 1176, 1668, 1677
NciI	CCSGG	2 cut(s)	1082, 1167
NcoI	CCATGG	1 cut(s)	1340
NdeI	CATATG	2 cut(s)	187, 1399
NdeII	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
NheI	GCTAGC	1 cut(s)	814
NlaIII	CATG	6 cut(s)	418, 664, 904, 939, 1091, 1344
NlaIV	GGNNCC	6 cut(s)	770, 906, 1186, 1214, 1489, 1541
NmuCI	GTSAC	3 cut(s)	17, 262, 410
NsiI	ATGCAT	1 cut(s)	1093
NspI	RCATGY	1 cut(s)	418
NspV	TTCGAA	1 cut(s)	677
PaqCI	CACCTGC	1 cut(s)	973
PceI	AGGCCT	1 cut(s)	1453
PcsI	WCGNNNNNNNCGW	1 cut(s)	567
PctI	GAATGC	3 cut(s)	226, 309, 826
PdmI	GAANNNNTTC	2 cut(s)	543, 826
PfeI	GAWTC	3 cut(s)	380, 430, 511
PflFI	GACNNNGTC	1 cut(s)	367
PflMI	CCANNNNNTGG	1 cut(s)	1687
PfoI	TCCNGGA	1 cut(s)	1165
PkrI	GCNGC	6 cut(s)	241, 420, 667, 1266, 1348, 1461
Ple19I	CGATCG	1 cut(s)	446
PleI	GAGTC	4 cut(s)	122, 692, 721, 1399
PpsI	GAGTC	4 cut(s)	122, 692, 721, 1399
PshAI	GACNNNNGTC	1 cut(s)	838
Psp124BI	GAGCTC	1 cut(s)	405
Psp6I	CCWGG	4 cut(s)	375, 1174, 1666, 1675
PspFI	CCCAGC	2 cut(s)	1215, 1227
PspGI	CCWGG	4 cut(s)	375, 1174, 1666, 1675
PspN4I	GGNNCC	6 cut(s)	770, 906, 1186, 1214, 1489, 1541
PspOMI	GGGCCC	1 cut(s)	1212
PspPI	GGNCC	6 cut(s)	152, 769, 1212, 1213, 1225, 1532
PstNI	CAGNNNCTG	2 cut(s)	929, 1070
PsuI	RGATCY	4 cut(s)	111, 904, 1184, 1597
PsyI	GACNNNGTC	1 cut(s)	367
PvuI	CGATCG	1 cut(s)	446
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	3 cut(s)	176, 874, 1396
RsaNI	GTAC	3 cut(s)	175, 873, 1395
SacI	GAGCTC	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1024
SaqAI	TTAA	2 cut(s)	566, 641
SatI	GCNGC	6 cut(s)	240, 419, 666, 1265, 1347, 1460
Sau3AI	GATC	7 cut(s)	111, 443, 904, 958, 1003, 1184, 1597
Sau96I	GGNCC	6 cut(s)	152, 769, 1212, 1213, 1225, 1532
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	4 cut(s)	122, 692, 722, 1399
ScrFI	CCNGG	6 cut(s)	377, 1082, 1167, 1176, 1668, 1677
SduI	GDGCHC	3 cut(s)	405, 1216, 1544
SfcI	CTRYAG	2 cut(s)	345, 606
SfuI	TTCGAA	1 cut(s)	677
SinI	GGWCC	2 cut(s)	769, 1532
SmlI	CTYRAG	5 cut(s)	288, 319, 406, 640, 1631
SmoI	CTYRAG	5 cut(s)	288, 319, 406, 640, 1631
SseBI	AGGCCT	1 cut(s)	1453
SsiI	CCGC	5 cut(s)	202, 1247, 1265, 1301, 1695
SspMI	CTAG	5 cut(s)	309, 735, 815, 1356, 1536
SstI	GAGCTC	1 cut(s)	405
StuI	AGGCCT	1 cut(s)	1453
StyD4I	CCNGG	6 cut(s)	375, 1080, 1165, 1174, 1666, 1675
StyI	CCWWGG	4 cut(s)	1208, 1340, 1535, 1681
TaaI	ACNGT	6 cut(s)	14, 485, 575, 840, 1100, 1293
TaqI	TCGA	5 cut(s)	330, 561, 677, 820, 1025
TaqII	GACCGA	1 cut(s)	456
TatI	WGTACW	2 cut(s)	174, 1394
TauI	GCSGC	1 cut(s)	1267
TfiI	GAWTC	3 cut(s)	380, 430, 511
Tru1I	TTAA	2 cut(s)	566, 641
Tru9I	TTAA	2 cut(s)	566, 641
TscAI	CASTG	3 cut(s)	535, 691, 1498
TseFI	GTSAC	3 cut(s)	17, 262, 410
TseI	GCWGC	5 cut(s)	239, 418, 665, 1346, 1459
Tsp45I	GTSAC	3 cut(s)	17, 262, 410
TspDTI	ATGAA	7 cut(s)	369, 474, 552, 795, 801, 816, 1076
TspGWI	ACGGA	4 cut(s)	897, 1134, 1524, 1638
TspRI	CASTG	3 cut(s)	535, 691, 1498
Tth111I	GACNNNGTC	1 cut(s)	367
Van91I	CCANNNNNTGG	1 cut(s)	1687
Vha464I	CTTAAG	1 cut(s)	640
VpaK11BI	GGWCC	2 cut(s)	769, 1532
XagI	CCTNNNNNAGG	2 cut(s)	322, 763
XapI	RAATTY	5 cut(s)	215, 268, 358, 803, 1525
XceI	RCATGY	1 cut(s)	418
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1688
XmaJI	CCTAGG	1 cut(s)	1535
XmiI	GTMKAC	1 cut(s)	1025
XmnI	GAANNNNTTC	2 cut(s)	543, 826
XspI	CTAG	5 cut(s)	309, 735, 815, 1356, 1536
ZrmI	AGTACT	1 cut(s)	176
Zsp2I	ATGCAT	1 cut(s)	1093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.