Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Forward (+)

26016890 .. 26021776

Gene Structure 4887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1169500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGATAGCAGCGACGTCCTCGTTAACGTCGTCTTCGGCGGGTGTGGCTGTGGACAAGGCGACGAGCGATCTTCTGATAAGTCCTGATTGGACTATGAACATAGACATCTGCGATTCCATCAATTCTCATCATTGGCAGGCGAAAGATGTCGTAAAAGCTGTTAAGAAAAGGTTGCAGCATAAGAGCCCCAAAGTTCAATTTCTAGCCTTGACGCTTTTGGAGACAATGGTGAAGAACTGTGGGGATTATGTACATGTTCAAATTGCAGAGAGAAATATACTAGGAGAGATGGTTAAAATTGTGAGAAAGAGGGCAGATATGCAGGTTCGAGAAAAAATCTTGATATTGCTGGACTCTTGGCAAGAGGCATTTGGTGGTCCTGCTGGAAAACATCCTCAGTACTACTGGGCATGCGAGGAACTAAGGCGCTCCGGTGTAGAATTTCCCAAGCATGCATCAGAAGCAGCTCCAATATTTACACCACCTGTTACACATACAACATTGCGGCACGCTCAAGCTGGATACGGAATGCCTAGCAATTCCTCAAGAAGGCTTGATGAAACAATGGCTACAGAAATGGAGAATCTAAGTTTGTCAAGCCTGGATTCTATGAGGAATGTTATGGAGCTCTTAGATGACATGCTGCAAGCTGTGAACCCTAGTGACCGTTTGGCCATAAAAGATGAAGTGATAGACGAGCTTGTCAATGGATGTCGTACCAACCAGAAAAAATTAATCCATATGCTAACTACAACTGGAGATGAAGAACTTCTTGCTCGGGGTCTTGATTTGAACGATAGAATGCAAAATCTGCTTGCAAAACATGATGCTATAGTTTCTGGTTTGCCTGTGCCAACTCAAGCTACAAGCTTTAGTCCCCAACCGACTGAAAAGTCTCCGTCAAGTTCCAAGCAGACTGAAGTAAAAGAGTCCAGCACAAGTGACTCTAGTCCAAGACCTAATGCTAATCTATCTGCACCAGTTGGTAACATGGCCAGGTTCCAGATTGATGAAGACGAAGAAGAGGAAGATGAATTTGCACAGCTAGCTCGAAGGCATTTTAAACCACGGTCCGTGCCTCCTCCGAACACATCTGGTGGAAATAATGATAATTTGGCGTTGGTGAGCACCAGTAGCACAATAGATCCATCTTCCTCAGCAGCTACAACATCCACTCCAAGCAATGCATTAGTTCTGGCTGATCCGCCTGCACCAGTTAAGACTACAAAAGAGCAGGACATGATCGACCTTCTGAGTATCACTTTATCAACAACAGCTGCCTCCCCTGACACCACCCCTCACGCTGCACCATCTAACCCTCACACCACGCAAGACCCTCACACGGTTCCAGCATCTAATGGCAACACACATCAGGCGCCTGTTGCCCCCACGGTACAAGGAAATCCCTATCCTTCTCAGCCTTATCCTGGAAATCCAGGGATGGGGTCCTATAACAGCTATGTTGTTCCATGGGCGCAAGCACAACCTCAATCTCAACTCCAACAGCCACAGTTCCAACCTCAATCACAATTTCAACCTCAGCCTCAATTCCAGTCACAATTTCATCCTCAATATCCTCAATACTCGTCTGCCTACCCTCCCCCACCATGGGCAGCTTCACCGGGATATTCTAACCAAAATCATTTTTCCACCAATAATACATCGACTCCTCGTGCCAACGCCACCACATCTTATACGCCAGCACAATCAGCTAGACCTTTGCAGCACTTCAATTCGTTCCCTACAAGGGGAATGAATGGGATAGATACCAACGGAGGTTCAGTGAGCCCCGGTCCTAGGAGCCCTGCCCCAGCAGCAGGACAAAAGCCTTACATTCCCTCGTACCGATTATTTGAAGATCTGAATGTGTTTGGCAATGCAGATGGAAAGTTTAAGATGACAAACAGCAATACATCATCTAGCTTGTCAGGAGCTGCGGGCCAAGGTATGGTAGGTGGGAGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

656

Amino Acids

71.0

Weight (kDa)

6.07

Isoelectric Point (pI)

52.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	13 - 124	3.1e-32	VHS domain
GAT	PF03127	205 - 281	1.3e-17	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	701, 892
AatII	GACGTC	1 cut(s)	17
Acc36I	ACCTGC	1 cut(s)	313
AccB1I	GGYRCC	1 cut(s)	1375
AccB7I	CCANNNNNTGG	1 cut(s)	1948
AciI	CCGC	4 cut(s)	38, 505, 1205, 1937
AclWI	GGATC	2 cut(s)	1139, 1196
AcoI	YGGCCR	2 cut(s)	672, 993
AcsI	RAATTY	2 cut(s)	440, 1034
AcuI	CTGAAG	1 cut(s)	939
AcyI	GRCGYC	2 cut(s)	14, 1376
AfaI	GTAC	5 cut(s)	252, 401, 718, 1395, 1844
AflIII	ACRYGT	1 cut(s)	253
AgsI	TTSAA	6 cut(s)	197, 260, 793, 1535, 1732, 1856
AjnI	CCWGG	4 cut(s)	600, 995, 1426, 1435
Alw21I	GWGCWC	2 cut(s)	630, 1130
Alw26I	GTCTC	2 cut(s)	215, 900
AlwI	GGATC	2 cut(s)	1139, 1196
AlwNI	CAGNNNCTG	1 cut(s)	1934
Ama87I	CYCGRG	1 cut(s)	777
AoxI	GGCC	3 cut(s)	672, 993, 1939
ApoI	RAATTY	2 cut(s)	440, 1034
AseI	ATTAAT	1 cut(s)	734
Asp700I	GAANNNNTTC	1 cut(s)	768
AspA2I	CCTAGG	1 cut(s)	1796
AspLEI	GCGC	3 cut(s)	429, 1378, 1477
AspS9I	GGNCC	5 cut(s)	377, 1071, 1446, 1793, 1939
AsuC2I	CCSGG	2 cut(s)	1623, 1791
AsuHPI	GGTGA	3 cut(s)	241, 1135, 1611
AsuNHI	GCTAGC	1 cut(s)	1045
AvaI	CYCGRG	1 cut(s)	777
AvaII	GGWCC	4 cut(s)	377, 1071, 1446, 1793
AvrII	CCTAGG	1 cut(s)	1796
BalI	TGGCCA	2 cut(s)	674, 995
BanI	GGYRCC	1 cut(s)	1375
BanII	GRGCYC	4 cut(s)	188, 630, 1790, 1805
BauI	CACGAG	1 cut(s)	1671
BbsI	GAAGAC	2 cut(s)	24, 1020
Bbv12I	GWGCWC	2 cut(s)	630, 1130
BbvCI	CCTCAGC	2 cut(s)	1156, 1539
BccI	CCATC	6 cut(s)	125, 283, 1156, 1318, 1435, 1877
BciT130I	CCWGG	4 cut(s)	602, 997, 1428, 1437
BciVI	GTATCC	1 cut(s)	515
BcnI	CCSGG	2 cut(s)	1623, 1791
BcoDI	GTCTC	2 cut(s)	215, 900
BfaI	CTAG	9 cut(s)	203, 281, 534, 660, 948, 1046, 1713, 1797, 1920
BfmI	CTRYAG	2 cut(s)	570, 831
BfoI	RGCGCY	2 cut(s)	430, 1379
BfuAI	ACCTGC	1 cut(s)	313
BfuI	GTATCC	1 cut(s)	515
BglII	AGATCT	1 cut(s)	1858
BlnI	CCTAGG	1 cut(s)	1796
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	6 cut(s)	602, 997, 1428, 1437, 1623, 1791
Bme18I	GGWCC	4 cut(s)	377, 1071, 1446, 1793
BmeT110I	CYCGRG	1 cut(s)	777
BmgT120I	GGNCC	5 cut(s)	377, 1071, 1446, 1793, 1939
BmiI	GGNNCC	5 cut(s)	1001, 1347, 1377, 1447, 1802
BmrFI	CCNGG	6 cut(s)	602, 997, 1428, 1437, 1623, 1791
BmrI	ACTGGG	1 cut(s)	415
BmsI	GCATC	3 cut(s)	464, 817, 1361
BmtI	GCTAGC	1 cut(s)	1049
BmuI	ACTGGG	1 cut(s)	415
BoxI	GACNNNNGTC	1 cut(s)	948
BpiI	GAAGAC	2 cut(s)	24, 1020
BpmI	CTGGAG	1 cut(s)	777
Bpu10I	CCTNAGC	2 cut(s)	1156, 1539
BpuEI	CTTGAG	3 cut(s)	498, 529, 843
BpuMI	CCSGG	2 cut(s)	1623, 1791
BsaHI	GRCGYC	2 cut(s)	14, 1376
BsaJI	CCNNGG	8 cut(s)	1067, 1389, 1436, 1469, 1607, 1789, 1796, 1942
BsaWI	WCCGGW	1 cut(s)	431
BsaXI	ACNNNNNCTCC	8 cut(s)	276, 306, 1159, 1189, 1651, 1681, 1767, 1797
Bse1I	ACTGG	6 cut(s)	410, 760, 980, 1131, 1214, 1552
Bse3DI	GCAATG	3 cut(s)	500, 1189, 1882
BseBI	CCWGG	4 cut(s)	602, 997, 1428, 1437
BseDI	CCNNGG	8 cut(s)	1067, 1389, 1436, 1469, 1607, 1789, 1796, 1942
BseGI	GGATG	5 cut(s)	391, 716, 1169, 1446, 1564
BseMI	GCAATG	3 cut(s)	500, 1189, 1882
BseMII	CTCAG	5 cut(s)	410, 1170, 1244, 1430, 1553
BseNI	ACTGG	6 cut(s)	410, 760, 980, 1131, 1214, 1552
BseRI	GAGGAG	2 cut(s)	1071, 1659
BseYI	CCCAGC	1 cut(s)	1810
BsgI	GTGCAG	3 cut(s)	960, 1194, 1290
BshFI	GGCC	3 cut(s)	674, 995, 1941
BshNI	GGYRCC	1 cut(s)	1375
BsiHKAI	GWGCWC	2 cut(s)	630, 1130
BsiHKCI	CYCGRG	1 cut(s)	777
BsiSI	CCGG	3 cut(s)	432, 1622, 1791
BslFI	GGGAC	1 cut(s)	861
BsmAI	GTCTC	2 cut(s)	215, 900
BsmFI	GGGAC	1 cut(s)	861
BsmI	GAATGC	2 cut(s)	534, 807
BsnI	GGCC	3 cut(s)	674, 995, 1941
BsoBI	CYCGRG	1 cut(s)	777
Bsp1286I	GDGCHC	5 cut(s)	188, 630, 1130, 1790, 1805
Bsp1407I	TGTACA	1 cut(s)	250
Bsp143I	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
Bsp19I	CCATGG	2 cut(s)	1469, 1607
BspACI	CCGC	4 cut(s)	38, 505, 1205, 1937
BspANI	GGCC	3 cut(s)	674, 995, 1941
BspCNI	CTCAG	5 cut(s)	409, 1169, 1245, 1429, 1552
BspLI	GGNNCC	5 cut(s)	1001, 1347, 1377, 1447, 1802
BspMI	ACCTGC	1 cut(s)	313
BspOI	GCTAGC	1 cut(s)	1049
BspPI	GGATC	2 cut(s)	1139, 1196
BspT107I	GGYRCC	1 cut(s)	1375
BsrDI	GCAATG	3 cut(s)	500, 1189, 1882
BsrGI	TGTACA	1 cut(s)	250
BsrI	ACTGG	6 cut(s)	410, 760, 980, 1131, 1214, 1552
BssECI	CCNNGG	8 cut(s)	1067, 1389, 1436, 1469, 1607, 1789, 1796, 1942
BssMI	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
BssNI	GRCGYC	2 cut(s)	14, 1376
BssSI	CACGAG	1 cut(s)	1671
BssT1I	CCWWGG	4 cut(s)	1469, 1607, 1796, 1942
Bst2BI	CACGAG	1 cut(s)	1671
Bst2UI	CCWGG	4 cut(s)	602, 997, 1428, 1437
Bst4CI	ACNGT	6 cut(s)	239, 668, 1071, 1345, 1393, 1512
Bst6I	CTCTTC	1 cut(s)	1017
BstACI	GRCGYC	2 cut(s)	14, 1376
BstAPI	GCANNNNNTGC	1 cut(s)	811
BstAUI	TGTACA	1 cut(s)	250
BstDEI	CTNAG	8 cut(s)	396, 422, 587, 631, 1156, 1253, 1416, 1539
BstDSI	CCRYGG	4 cut(s)	1067, 1389, 1469, 1607
BstENI	CCTNNNNNAGG	1 cut(s)	547
BstF5I	GGATG	5 cut(s)	391, 716, 1169, 1446, 1564
BstH2I	RGCGCY	2 cut(s)	430, 1379
BstHHI	GCGC	3 cut(s)	429, 1378, 1477
BstKTI	GATC	5 cut(s)	70, 1147, 1204, 1245, 1861
BstMAI	GTCTC	2 cut(s)	215, 900
BstMBI	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 461, 811, 1046, 1134, 1382, 1709, 1814
BstNI	CCWGG	4 cut(s)	602, 997, 1428, 1437
BstNSI	RCATGY	4 cut(s)	257, 414, 455, 643
BstPAI	GACNNNNGTC	1 cut(s)	948
BstSCI	CCNGG	6 cut(s)	600, 995, 1426, 1435, 1621, 1789
BstSFI	CTRYAG	2 cut(s)	570, 831
BstV2I	GAAGAC	2 cut(s)	24, 1020
BstX2I	RGATCY	2 cut(s)	1144, 1858
BstYI	RGATCY	2 cut(s)	1144, 1858
BsuI	GTATCC	1 cut(s)	515
BsuRI	GGCC	3 cut(s)	674, 995, 1941
BtgI	CCRYGG	4 cut(s)	1067, 1389, 1469, 1607
BtsCI	GGATG	5 cut(s)	391, 716, 1169, 1446, 1564
BtsIMutI	CAGTG	1 cut(s)	1788
BveI	ACCTGC	1 cut(s)	313
CaiI	CAGNNNCTG	1 cut(s)	1934
CfoI	GCGC	3 cut(s)	429, 1378, 1477
Cfr13I	GGNCC	5 cut(s)	377, 1071, 1446, 1793, 1939
CpoI	CGGWCCG	1 cut(s)	1071
CseI	GACGC	1 cut(s)	220
Csp6I	GTAC	5 cut(s)	251, 400, 717, 1394, 1843
CspI	CGGWCCG	1 cut(s)	1071
CviAII	CATG	9 cut(s)	254, 411, 452, 640, 824, 991, 1240, 1470, 1608
CviQI	GTAC	5 cut(s)	251, 400, 717, 1394, 1843
DdeI	CTNAG	8 cut(s)	396, 422, 587, 631, 1156, 1253, 1416, 1539
DinI	GGCGCC	1 cut(s)	1377
DpnI	GATC	5 cut(s)	69, 1146, 1203, 1244, 1860
DpnII	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
DraI	TTTAAA	1 cut(s)	1063
DrdI	GACNNNNNNGTC	2 cut(s)	701, 892
DseDI	GACNNNNNNGTC	2 cut(s)	701, 892
EaeI	YGGCCR	2 cut(s)	672, 993
Eam1104I	CTCTTC	1 cut(s)	1017
EarI	CTCTTC	1 cut(s)	1017
EciI	GGCGGA	1 cut(s)	1194
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	4 cut(s)	1469, 1607, 1796, 1942
Eco24I	GRGCYC	4 cut(s)	188, 630, 1790, 1805
Eco47I	GGWCC	4 cut(s)	377, 1071, 1446, 1793
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	1 cut(s)	939
Eco88I	CYCGRG	1 cut(s)	777
EcoICRI	GAGCTC	1 cut(s)	628
EcoNI	CCTNNNNNAGG	1 cut(s)	547
EcoO109I	RGGNCCY	1 cut(s)	1446
EcoRII	CCWGG	4 cut(s)	600, 995, 1426, 1435
EcoT14I	CCWWGG	4 cut(s)	1469, 1607, 1796, 1942
EcoT22I	ATGCAT	2 cut(s)	457, 1189
EcoT38I	GRGCYC	4 cut(s)	188, 630, 1790, 1805
EgeI	GGCGCC	1 cut(s)	1377
EheI	GGCGCC	1 cut(s)	1377
ErhI	CCWWGG	4 cut(s)	1469, 1607, 1796, 1942
FaeI	CATG	9 cut(s)	257, 414, 455, 643, 827, 994, 1243, 1473, 1611
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	1 cut(s)	861
FatI	CATG	9 cut(s)	253, 410, 451, 639, 823, 990, 1239, 1469, 1607
FauI	CCCGC	2 cut(s)	31, 1930
FauNDI	CATATG	1 cut(s)	741
FokI	GGATG	5 cut(s)	378, 723, 1156, 1453, 1551
FriOI	GRGCYC	4 cut(s)	188, 630, 1790, 1805
FspBI	CTAG	9 cut(s)	203, 281, 534, 660, 948, 1046, 1713, 1797, 1920
GlaI	GCGC	3 cut(s)	428, 1377, 1476
GsaI	CCCAGC	1 cut(s)	1814
GsuI	CTGGAG	1 cut(s)	777
HaeII	RGCGCY	2 cut(s)	430, 1379
HaeIII	GGCC	3 cut(s)	674, 995, 1941
HapII	CCGG	3 cut(s)	432, 1622, 1791
HgaI	GACGC	1 cut(s)	220
HhaI	GCGC	3 cut(s)	429, 1378, 1477
Hin1I	GRCGYC	2 cut(s)	14, 1376
Hin1II	CATG	9 cut(s)	257, 414, 455, 643, 827, 994, 1243, 1473, 1611
Hin6I	GCGC	3 cut(s)	427, 1376, 1475
HinP1I	GCGC	3 cut(s)	427, 1376, 1475
HincII	GTYRAC	1 cut(s)	24
HindII	GTYRAC	1 cut(s)	24
HindIII	AAGCTT	1 cut(s)	868
HinfI	GANTC	7 cut(s)	113, 353, 583, 605, 929, 944, 1666
HpaI	GTTAAC	1 cut(s)	24
HpaII	CCGG	3 cut(s)	432, 1622, 1791
HphI	GGTGA	3 cut(s)	241, 1135, 1611
Hpy166II	GTNNAC	3 cut(s)	24, 52, 655
Hpy188I	TCNGA	5 cut(s)	75, 460, 1086, 1254, 1863
Hpy188III	TCNNGA	7 cut(s)	83, 329, 340, 546, 785, 1003, 1929
Hpy8I	GTNNAC	3 cut(s)	24, 52, 655
Hpy99I	CGWCG	3 cut(s)	16, 31, 64
HpyAV	CCTTC	4 cut(s)	543, 1047, 1259, 1422
HpyCH4III	ACNGT	6 cut(s)	239, 668, 1071, 1345, 1393, 1512
HpyCH4IV	ACGT	2 cut(s)	14, 26
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 461, 811, 1046, 1134, 1382, 1709, 1814
HpyF3I	CTNAG	8 cut(s)	396, 422, 587, 631, 1156, 1253, 1416, 1539
HpySE526I	ACGT	2 cut(s)	14, 26
Hsp92I	GRCGYC	2 cut(s)	14, 1376
Hsp92II	CATG	9 cut(s)	257, 414, 455, 643, 827, 994, 1243, 1473, 1611
HspAI	GCGC	3 cut(s)	427, 1376, 1475
KasI	GGCGCC	1 cut(s)	1375
KspAI	GTTAAC	1 cut(s)	24
Kzo9I	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
LmnI	GCTCC	5 cut(s)	434, 472, 625, 1800, 1931
LweI	GCATC	3 cut(s)	464, 817, 1361
MaeI	CTAG	9 cut(s)	203, 281, 534, 660, 948, 1046, 1713, 1797, 1920
MaeII	ACGT	2 cut(s)	14, 26
MaeIII	GTNAC	5 cut(s)	487, 662, 941, 986, 1554
MalI	GATC	5 cut(s)	69, 1146, 1203, 1244, 1860
MboI	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
MflI	RGATCY	2 cut(s)	1144, 1858
MhlI	GDGCHC	5 cut(s)	188, 630, 1130, 1790, 1805
MlsI	TGGCCA	2 cut(s)	674, 995
MluNI	TGGCCA	2 cut(s)	674, 995
Mly113I	GGCGCC	1 cut(s)	1376
MlyI	GAGTC	4 cut(s)	347, 938, 938, 1660
MmeI	TCCRAC	2 cut(s)	1525, 1540
Mox20I	TGGCCA	2 cut(s)	674, 995
Mph1103I	ATGCAT	2 cut(s)	457, 1189
MroXI	GAANNNNTTC	1 cut(s)	768
MscI	TGGCCA	2 cut(s)	674, 995
MseI	TTAA	7 cut(s)	23, 162, 294, 734, 1062, 1218, 1893
Msp20I	TGGCCA	2 cut(s)	674, 995
MspA1I	CMGCKG	1 cut(s)	1277
MspI	CCGG	3 cut(s)	432, 1622, 1791
MspR9I	CCNGG	6 cut(s)	602, 997, 1428, 1437, 1623, 1791
Mva1269I	GAATGC	2 cut(s)	534, 807
MvaI	CCWGG	4 cut(s)	602, 997, 1428, 1437
MwoI	GCNNNNNNNGC	8 cut(s)	44, 461, 811, 1046, 1134, 1382, 1709, 1814
NarI	GGCGCC	1 cut(s)	1376
NciI	CCSGG	2 cut(s)	1623, 1791
NcoI	CCATGG	2 cut(s)	1469, 1607
NdeI	CATATG	1 cut(s)	741
NdeII	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
NheI	GCTAGC	1 cut(s)	1045
NlaIII	CATG	9 cut(s)	257, 414, 455, 643, 827, 994, 1243, 1473, 1611
NlaIV	GGNNCC	5 cut(s)	1001, 1347, 1377, 1447, 1802
NmuCI	GTSAC	3 cut(s)	662, 941, 1554
NsiI	ATGCAT	2 cut(s)	457, 1189
NspI	RCATGY	4 cut(s)	257, 414, 455, 643
PaeI	GCATGC	2 cut(s)	414, 455
PciI	ACATGT	1 cut(s)	253
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PctI	GAATGC	2 cut(s)	534, 807
PdmI	GAANNNNTTC	1 cut(s)	768
PfeI	GAWTC	3 cut(s)	113, 583, 605
PflMI	CCANNNNNTGG	1 cut(s)	1948
PfoI	TCCNGGA	1 cut(s)	1426
PleI	GAGTC	4 cut(s)	347, 937, 938, 1660
PluTI	GGCGCC	1 cut(s)	1379
PpsI	GAGTC	4 cut(s)	347, 937, 938, 1660
PpuMI	RGGWCCY	1 cut(s)	1446
PscI	ACATGT	1 cut(s)	253
PshAI	GACNNNNGTC	1 cut(s)	948
PshBI	ATTAAT	1 cut(s)	734
Psp124BI	GAGCTC	1 cut(s)	630
Psp5II	RGGWCCY	1 cut(s)	1446
Psp6I	CCWGG	4 cut(s)	600, 995, 1426, 1435
PspFI	CCCAGC	1 cut(s)	1810
PspGI	CCWGG	4 cut(s)	600, 995, 1426, 1435
PspN4I	GGNNCC	5 cut(s)	1001, 1347, 1377, 1447, 1802
PspPI	GGNCC	5 cut(s)	377, 1071, 1446, 1793, 1939
PspPPI	RGGWCCY	1 cut(s)	1446
PstNI	CAGNNNCTG	1 cut(s)	1934
PsuI	RGATCY	2 cut(s)	1144, 1858
PvuII	CAGCTG	1 cut(s)	1277
RsaI	GTAC	5 cut(s)	252, 401, 718, 1395, 1844
RsaNI	GTAC	5 cut(s)	251, 400, 717, 1394, 1843
Rsr2I	CGGWCCG	1 cut(s)	1071
RsrII	CGGWCCG	1 cut(s)	1071
SacI	GAGCTC	1 cut(s)	630
SaqAI	TTAA	7 cut(s)	23, 162, 294, 734, 1062, 1218, 1893
Sau3AI	GATC	5 cut(s)	67, 1144, 1201, 1242, 1858
Sau96I	GGNCC	5 cut(s)	377, 1071, 1446, 1793, 1939
ScaI	AGTACT	1 cut(s)	401
SchI	GAGTC	4 cut(s)	347, 938, 938, 1660
ScrFI	CCNGG	6 cut(s)	602, 997, 1428, 1437, 1623, 1791
SduI	GDGCHC	5 cut(s)	188, 630, 1130, 1790, 1805
SfaNI	GCATC	3 cut(s)	464, 817, 1361
SfcI	CTRYAG	2 cut(s)	570, 831
SfoI	GGCGCC	1 cut(s)	1377
SinI	GGWCC	4 cut(s)	377, 1071, 1446, 1793
SmlI	CTYRAG	3 cut(s)	513, 544, 858
SmoI	CTYRAG	3 cut(s)	513, 544, 858
SphI	GCATGC	2 cut(s)	414, 455
SsiI	CCGC	4 cut(s)	38, 505, 1205, 1937
SspDI	GGCGCC	1 cut(s)	1375
SspI	AATATT	1 cut(s)	474
SspMI	CTAG	9 cut(s)	203, 281, 534, 660, 948, 1046, 1713, 1797, 1920
SstI	GAGCTC	1 cut(s)	630
StyD4I	CCNGG	6 cut(s)	600, 995, 1426, 1435, 1621, 1789
StyI	CCWWGG	4 cut(s)	1469, 1607, 1796, 1942
TaaI	ACNGT	6 cut(s)	239, 668, 1071, 1345, 1393, 1512
TaiI	ACGT	2 cut(s)	17, 29
TaqI	TCGA	4 cut(s)	328, 1051, 1245, 1664
TatI	WGTACW	2 cut(s)	250, 399
TauI	GCSGC	1 cut(s)	508
TfiI	GAWTC	3 cut(s)	113, 583, 605
Tru1I	TTAA	7 cut(s)	23, 162, 294, 734, 1062, 1218, 1893
Tru9I	TTAA	7 cut(s)	23, 162, 294, 734, 1062, 1218, 1893
TscAI	CASTG	1 cut(s)	1788
TseFI	GTSAC	3 cut(s)	662, 941, 1554
Tsp45I	GTSAC	3 cut(s)	662, 941, 1554
TspDTI	ATGAA	8 cut(s)	110, 573, 699, 777, 1026, 1047, 1553, 1769
TspGWI	ACGGA	4 cut(s)	540, 888, 1063, 1788
TspRI	CASTG	1 cut(s)	1788
Van91I	CCANNNNNTGG	1 cut(s)	1948
VpaK11BI	GGWCC	4 cut(s)	377, 1071, 1446, 1793
VspI	ATTAAT	1 cut(s)	734
XagI	CCTNNNNNAGG	1 cut(s)	547
XapI	RAATTY	2 cut(s)	440, 1034
XceI	RCATGY	4 cut(s)	257, 414, 455, 643
XmaJI	CCTAGG	1 cut(s)	1796
XmnI	GAANNNNTTC	1 cut(s)	768
XspI	CTAG	9 cut(s)	203, 281, 534, 660, 948, 1046, 1713, 1797, 1920
ZraI	GACGTC	1 cut(s)	15
ZrmI	AGTACT	1 cut(s)	401
Zsp2I	ATGCAT	2 cut(s)	457, 1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.