Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Forward (+)

9013732 .. 9018598

Gene Structure 4867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG106700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGTGAAGAATTGTGGTGATTATATCCATTTTCAAATTGCAGAGAGGAATATATTGGGAGAGATGATAAAAATTGTGAGGAAGAAGTCAGATATGCAGGTAAGGGATAAGATTTTGATATTGGTGGACTCTTGGCAAGCAGCTTTTGGTGGGCCTTCAGGAAAGCATCCTCAGTACTATTGGGCATATGATGAGCTAAGGCGGTCTGGAGTAGAGTTTCCTAAGCATTCCTTAGATGCAGCTCCAATGTTTGCACCACCTGTTGCAAATTCAGTACCAAGACCTTCTCAAGCTGGATATGGAATGCCTAGCAATTCCTCAAGGCGGCTTGATGAGACAATGGCTACAGAAAACGAAAATTTAACTTTGACAAGCCTGGATTCTATGAGGGATGTTATGGAGCTCTTGAGTGACATGCTGCAAGCTGTGAACCCTAATGACCGATTGGGTGTAAAAGATGAAGTCATAGTTGAACTTGTCAACCAGTGTCGTGCCAACCAGAAAAAGCTGATTCATATGCTAACTACAACCGGAGATGAAGAACTTCTTGGACGGGGTCTCGAATTAAACGACAGTCTGCAAAGTTTGCTTGCAAAGCATGATGCTATAGCTTCTGGTTTACCTTTGCCAACTGCAAACTTTAGTCCTCAATCAGCTGAAATGCCCGCATCCAGTTCCAAGCATACTGAAGCAAAAGACTCCAGCACAAGTGACTCCAGTCCAAGACCTAAAGCTAGTCCCTCTGCACCAGTTGTTACCACGTCAAGGGTCCAAATTGATGAAGATGAAGAAGAGGAAGATGAATTTGCACAGCTAGCTCGAAGGCATTCCAAACAAAGCTCCTCCAAGCCTACTGAAAGCACACCTAATGGTACCAGTGAAGGTTTGGCATTGGTAAGCGTAGATCCGTCTCCGTCTGCATCAGTGGCAACATCTGTCCCAAACAACGCGTTAGTTCTGTCTGATCCACCTGCTTCAAGTAAGACTACACAAGAGCAGAACATAATTGACCTACTGAGTATCACTTTGTCGACAACAGCAATCTCCAGTGACACCTCTCCTCCTCCTCCTCCAACATCAGTCCCTGCCCCACTTCCGGCATCTAACGGTAATGTTCATCAGATACCTGCTTCCCCCGCTATACAAGGCAATCCCTATCCTTCCCAAGCTTATCCTGGAAATCCTGGGCTTGGATCCTACAACAGCTATGTTGTTCCTTGGGCACAACCTCAGGCCCAACAACCTCAATTCAGGCCGCAATTACAGCCACAGCAACAGCAGCAACCTCAATTCCAGTCGCAGTTTCAACCTCAATATCCCCAATACTCTTCTGCCTACCCTCCTCCACCATGGGCATCTTCTCCTGGTTATCCTAACAACCAAAATCATGTGTCCGCCAACAGTACGTATGCGGCTTCTCACACCAACACAACAGCTTACATGCCAGCGCAAGGAGCAAGGCCTTTGCAGCAGTATAATTCATTCCCCGCGAGAGGAACCACTGGGTCAGATAACAACGGAGGTTTCCCAACAAATCCTGGTCCTAGGAGCCCTGGACCTGCTGCAGGACAAAAGCCCTTCATTCCCTCGTACAGATTATTTGAAGATCTGAATGTTTTTGGCAATGCTGATGGAAAGCTTAAGGTGGCGAACAGCAACCCATCATCTGGCTTCTCTGGAACTCCAGGCCAAGGTATGGTGGGTGGGAGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

571

Amino Acids

61.33

Weight (kDa)

5.64

Isoelectric Point (pI)

60.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	1 - 54	7.8e-08	VHS domain
GAT	PF03127	132 - 206	7.3e-19	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	979
Acc36I	ACCTGC	4 cut(s)	88, 979, 1135, 1567
Acc65I	GGTACC	1 cut(s)	872
AccB1I	GGYRCC	1 cut(s)	872
AccB7I	CCANNNNNTGG	2 cut(s)	1667, 1696
AccI	GTMKAC	1 cut(s)	1031
AccII	CGCG	2 cut(s)	950, 1490
AciI	CCGC	8 cut(s)	202, 325, 666, 1137, 1256, 1395, 1412, 1488
AclWI	GGATC	4 cut(s)	899, 959, 1188, 1201
AcsI	RAATTY	3 cut(s)	268, 358, 803
AcuI	CTGAAG	2 cut(s)	141, 708
AfaI	GTAC	5 cut(s)	176, 276, 874, 1405, 1592
AflII	CTTAAG	1 cut(s)	1640
AflIII	ACRYGT	1 cut(s)	948
AgsI	TTSAA	5 cut(s)	35, 473, 978, 1307, 1604
AjiI	CACGTC	1 cut(s)	762
AjnI	CCWGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
AjuI	GAANNNNNNNTTGG	2 cut(s)	531, 563
Alw21I	GWGCWC	1 cut(s)	405
Alw26I	GTCTC	3 cut(s)	329, 563, 915
AlwI	GGATC	4 cut(s)	899, 959, 1188, 1201
AlwNI	CAGNNNCTG	1 cut(s)	1085
AoxI	GGCC	5 cut(s)	152, 1233, 1253, 1460, 1687
ApeKI	GCWGC	6 cut(s)	140, 239, 418, 1279, 1468, 1562
ApoI	RAATTY	3 cut(s)	268, 358, 803
Asp700I	GAANNNNTTC	2 cut(s)	543, 826
Asp718I	GGTACC	1 cut(s)	872
AspA2I	CCTAGG	1 cut(s)	1544
AspLEI	GCGC	1 cut(s)	1450
AspS9I	GGNCC	5 cut(s)	152, 769, 1234, 1541, 1556
AsuHPI	GGTGA	2 cut(s)	16, 29
AsuNHI	GCTAGC	1 cut(s)	814
AvaII	GGWCC	3 cut(s)	769, 1541, 1556
AvrII	CCTAGG	1 cut(s)	1544
AxyI	CCTNAGG	1 cut(s)	1230
BaeGI	GKGCMC	1 cut(s)	1225
BamHI	GGATCC	1 cut(s)	1193
BanI	GGYRCC	1 cut(s)	872
BanII	GRGCYC	2 cut(s)	405, 1553
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	6 cut(s)	152, 251, 405, 1291, 1480, 1549
BccI	CCATC	2 cut(s)	1625, 1669
BciT130I	CCWGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
BcoDI	GTCTC	3 cut(s)	329, 563, 915
BfaI	CTAG	4 cut(s)	309, 735, 815, 1545
BfmI	CTRYAG	3 cut(s)	345, 606, 1563
BfrI	CTTAAG	1 cut(s)	1640
BfuAI	ACCTGC	4 cut(s)	88, 979, 1135, 1567
BglII	AGATCT	1 cut(s)	1606
BisI	GCNGC	9 cut(s)	141, 240, 326, 419, 1256, 1280, 1413, 1469, 1563
BlnI	CCTAGG	1 cut(s)	1544
BlsI	GCNGC	9 cut(s)	142, 241, 327, 420, 1257, 1281, 1414, 1470, 1564
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
Bme18I	GGWCC	3 cut(s)	769, 1541, 1556
BmgBI	CACGTC	1 cut(s)	762
BmgT120I	GGNCC	5 cut(s)	152, 769, 1234, 1541, 1556
BmiI	GGNNCC	5 cut(s)	770, 874, 1195, 1498, 1550
BmrFI	CCNGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
BmrI	ACTGGG	1 cut(s)	1512
BmsI	GCATC	7 cut(s)	175, 226, 592, 677, 929, 1109, 1364
BmtI	GCTAGC	1 cut(s)	818
BmuI	ACTGGG	1 cut(s)	1512
BoxI	GACNNNNGTC	1 cut(s)	717
BpmI	CTGGAG	5 cut(s)	228, 685, 700, 1030, 1668
Bpu10I	CCTNAGC	2 cut(s)	197, 222
BpuEI	CTTGAG	3 cut(s)	273, 304, 427
BsaAI	YACGTR	1 cut(s)	1407
BsaI	GGTCTC	1 cut(s)	563
BsaJI	CCNNGG	6 cut(s)	1184, 1217, 1349, 1544, 1552, 1690
BsaWI	WCCGGW	1 cut(s)	530
BsaXI	ACNNNNNCTCC	2 cut(s)	1045, 1075
Bse1I	ACTGG	8 cut(s)	484, 672, 717, 749, 876, 1047, 1294, 1507
Bse21I	CCTNAGG	1 cut(s)	1230
Bse3DI	GCAATG	1 cut(s)	1630
BseBI	CCWGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
BseDI	CCNNGG	6 cut(s)	1184, 1217, 1349, 1544, 1552, 1690
BseGI	GGATG	3 cut(s)	166, 397, 668
BseMI	GCAATG	1 cut(s)	1630
BseMII	CTCAG	3 cut(s)	185, 1007, 1244
BseNI	ACTGG	8 cut(s)	484, 672, 717, 749, 876, 1047, 1294, 1507
BseRI	GAGGAG	6 cut(s)	832, 1050, 1053, 1056, 1059, 1332
BseSI	GKGCMC	1 cut(s)	1225
BseXI	GCAGC	6 cut(s)	152, 251, 405, 1291, 1480, 1549
BsgI	GTGCAG	1 cut(s)	729
Bsh1236I	CGCG	2 cut(s)	950, 1490
BshFI	GGCC	5 cut(s)	154, 1235, 1255, 1462, 1689
BshNI	GGYRCC	1 cut(s)	872
BsiHKAI	GWGCWC	1 cut(s)	405
BsiSI	CCGG	2 cut(s)	531, 1097
BslFI	GGGAC	3 cut(s)	723, 923, 1067
BsmAI	GTCTC	3 cut(s)	329, 563, 915
BsmBI	CGTCTC	1 cut(s)	915
BsmFI	GGGAC	3 cut(s)	723, 923, 1067
BsmI	GAATGC	3 cut(s)	226, 309, 826
BsnI	GGCC	5 cut(s)	154, 1235, 1255, 1462, 1689
Bso31I	GGTCTC	1 cut(s)	563
Bsp1286I	GDGCHC	3 cut(s)	405, 1225, 1553
Bsp143I	GATC	4 cut(s)	904, 964, 1193, 1606
Bsp19I	CCATGG	1 cut(s)	1349
BspACI	CCGC	8 cut(s)	202, 325, 666, 1137, 1256, 1395, 1412, 1488
BspANI	GGCC	5 cut(s)	154, 1235, 1255, 1462, 1689
BspCNI	CTCAG	3 cut(s)	184, 1008, 1243
BspFNI	CGCG	2 cut(s)	950, 1490
BspLI	GGNNCC	5 cut(s)	770, 874, 1195, 1498, 1550
BspMAI	CTGCAG	1 cut(s)	1567
BspMI	ACCTGC	4 cut(s)	88, 979, 1135, 1567
BspOI	GCTAGC	1 cut(s)	818
BspPI	GGATC	4 cut(s)	899, 959, 1188, 1201
BspT107I	GGYRCC	1 cut(s)	872
BspTI	CTTAAG	1 cut(s)	1640
BspTNI	GGTCTC	1 cut(s)	563
BsrDI	GCAATG	1 cut(s)	1630
BsrI	ACTGG	8 cut(s)	484, 672, 717, 749, 876, 1047, 1294, 1507
BssECI	CCNNGG	6 cut(s)	1184, 1217, 1349, 1544, 1552, 1690
BssMI	GATC	4 cut(s)	904, 964, 1193, 1606
BssT1I	CCWWGG	4 cut(s)	1217, 1349, 1544, 1690
Bst2UI	CCWGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
Bst4CI	ACNGT	3 cut(s)	575, 1109, 1403
Bst6I	CTCTTC	2 cut(s)	786, 1333
BstAFI	CTTAAG	1 cut(s)	1640
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstBAI	YACGTR	1 cut(s)	1407
BstC8I	GCNNGC	6 cut(s)	138, 423, 591, 666, 816, 1446
BstDEI	CTNAG	6 cut(s)	171, 197, 222, 232, 1016, 1230
BstDSI	CCRYGG	1 cut(s)	1349
BstENI	CCTNNNNNAGG	1 cut(s)	1563
BstF5I	GGATG	3 cut(s)	166, 397, 668
BstFNI	CGCG	2 cut(s)	950, 1490
BstHHI	GCGC	1 cut(s)	1450
BstKTI	GATC	4 cut(s)	907, 967, 1196, 1609
BstMAI	GTCTC	3 cut(s)	329, 563, 915
BstMBI	GATC	4 cut(s)	904, 964, 1193, 1606
BstMWI	GCNNNNNNNGC	9 cut(s)	586, 595, 815, 926, 1136, 1264, 1279, 1454, 1468
BstNI	CCWGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
BstNSI	RCATGY	2 cut(s)	418, 1444
BstPAI	GACNNNNGTC	1 cut(s)	717
BstSCI	CCNGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
BstSFI	CTRYAG	3 cut(s)	345, 606, 1563
BstSLI	GKGCMC	1 cut(s)	1225
BstSNI	TACGTA	1 cut(s)	1407
BstUI	CGCG	2 cut(s)	950, 1490
BstV1I	GCAGC	6 cut(s)	152, 251, 405, 1291, 1480, 1549
BstX2I	RGATCY	3 cut(s)	904, 1193, 1606
BstYI	RGATCY	3 cut(s)	904, 1193, 1606
Bsu36I	CCTNAGG	1 cut(s)	1230
BsuRI	GGCC	5 cut(s)	154, 1235, 1255, 1462, 1689
BtgI	CCRYGG	1 cut(s)	1349
BtrI	CACGTC	1 cut(s)	762
BtsCI	GGATG	3 cut(s)	166, 397, 668
BtsIMutI	CAGTG	5 cut(s)	491, 883, 930, 1054, 1500
BveI	ACCTGC	4 cut(s)	88, 979, 1135, 1567
Cac8I	GCNNGC	6 cut(s)	138, 423, 591, 666, 816, 1446
CaiI	CAGNNNCTG	1 cut(s)	1085
CfoI	GCGC	1 cut(s)	1450
Cfr13I	GGNCC	5 cut(s)	152, 769, 1234, 1541, 1556
Csp6I	GTAC	5 cut(s)	175, 275, 873, 1404, 1591
CviAII	CATG	5 cut(s)	415, 599, 1350, 1388, 1441
CviQI	GTAC	5 cut(s)	175, 275, 873, 1404, 1591
DdeI	CTNAG	6 cut(s)	171, 197, 222, 232, 1016, 1230
DpnI	GATC	4 cut(s)	906, 966, 1195, 1608
DpnII	GATC	4 cut(s)	904, 964, 1193, 1606
Eam1104I	CTCTTC	2 cut(s)	786, 1333
EarI	CTCTTC	2 cut(s)	786, 1333
EciI	GGCGGA	1 cut(s)	1384
Ecl136II	GAGCTC	1 cut(s)	403
Eco105I	TACGTA	1 cut(s)	1407
Eco130I	CCWWGG	4 cut(s)	1217, 1349, 1544, 1690
Eco147I	AGGCCT	1 cut(s)	1462
Eco24I	GRGCYC	2 cut(s)	405, 1553
Eco31I	GGTCTC	1 cut(s)	563
Eco47I	GGWCC	3 cut(s)	769, 1541, 1556
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	2 cut(s)	141, 708
Eco81I	CCTNAGG	1 cut(s)	1230
EcoICRI	GAGCTC	1 cut(s)	403
EcoNI	CCTNNNNNAGG	1 cut(s)	1563
EcoRII	CCWGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
EcoT14I	CCWWGG	4 cut(s)	1217, 1349, 1544, 1690
EcoT38I	GRGCYC	2 cut(s)	405, 1553
ErhI	CCWWGG	4 cut(s)	1217, 1349, 1544, 1690
Esp3I	CGTCTC	1 cut(s)	915
FaeI	CATG	5 cut(s)	418, 602, 1353, 1391, 1444
FalI	AAGNNNNNCTT	4 cut(s)	215, 247, 531, 563
FaqI	GGGAC	3 cut(s)	723, 923, 1067
FatI	CATG	5 cut(s)	414, 598, 1349, 1387, 1440
FauI	CCCGC	3 cut(s)	673, 1144, 1495
FauNDI	CATATG	2 cut(s)	187, 516
FblI	GTMKAC	1 cut(s)	1031
Fnu4HI	GCNGC	9 cut(s)	141, 240, 326, 419, 1256, 1280, 1413, 1469, 1563
FokI	GGATG	3 cut(s)	153, 404, 655
FriOI	GRGCYC	2 cut(s)	405, 1553
Fsp4HI	GCNGC	9 cut(s)	141, 240, 326, 419, 1256, 1280, 1413, 1469, 1563
FspBI	CTAG	4 cut(s)	309, 735, 815, 1545
GlaI	GCGC	1 cut(s)	1449
GluI	GCNGC	9 cut(s)	141, 240, 326, 419, 1256, 1280, 1413, 1469, 1563
GsuI	CTGGAG	5 cut(s)	228, 685, 700, 1030, 1668
HaeIII	GGCC	5 cut(s)	154, 1235, 1255, 1462, 1689
HapII	CCGG	2 cut(s)	531, 1097
HhaI	GCGC	1 cut(s)	1450
Hin1II	CATG	5 cut(s)	418, 602, 1353, 1391, 1444
Hin6I	GCGC	1 cut(s)	1448
HinP1I	GCGC	1 cut(s)	1448
HincII	GTYRAC	2 cut(s)	481, 1032
HindII	GTYRAC	2 cut(s)	481, 1032
HindIII	AAGCTT	2 cut(s)	1167, 1637
HinfI	GANTC	5 cut(s)	128, 380, 511, 698, 713
HpaII	CCGG	2 cut(s)	531, 1097
HphI	GGTGA	2 cut(s)	16, 29
Hpy166II	GTNNAC	5 cut(s)	127, 430, 481, 620, 1032
Hpy188I	TCNGA	5 cut(s)	91, 964, 1122, 1510, 1611
Hpy188III	TCNNGA	5 cut(s)	159, 207, 406, 560, 1677
Hpy8I	GTNNAC	5 cut(s)	127, 430, 481, 620, 1032
HpyAV	CCTTC	6 cut(s)	165, 294, 816, 875, 1170, 1588
HpyCH4III	ACNGT	3 cut(s)	575, 1109, 1403
HpyCH4IV	ACGT	2 cut(s)	761, 1406
HpyF10VI	GCNNNNNNNGC	9 cut(s)	586, 595, 815, 926, 1136, 1264, 1279, 1454, 1468
HpyF3I	CTNAG	6 cut(s)	171, 197, 222, 232, 1016, 1230
HpySE526I	ACGT	2 cut(s)	761, 1406
Hsp92II	CATG	5 cut(s)	418, 602, 1353, 1391, 1444
HspAI	GCGC	1 cut(s)	1448
KpnI	GGTACC	1 cut(s)	876
Kzo9I	GATC	4 cut(s)	904, 964, 1193, 1606
LmnI	GCTCC	5 cut(s)	247, 400, 845, 1454, 1548
Lsp1109I	GCAGC	6 cut(s)	152, 251, 405, 1291, 1480, 1549
LweI	GCATC	7 cut(s)	175, 226, 592, 677, 929, 1109, 1364
MaeI	CTAG	4 cut(s)	309, 735, 815, 1545
MaeII	ACGT	2 cut(s)	761, 1406
MaeIII	GTNAC	4 cut(s)	410, 710, 754, 1049
MalI	GATC	4 cut(s)	906, 966, 1195, 1608
MboI	GATC	4 cut(s)	904, 964, 1193, 1606
MflI	RGATCY	3 cut(s)	904, 1193, 1606
MhlI	GDGCHC	3 cut(s)	405, 1225, 1553
MluI	ACGCGT	1 cut(s)	948
MlyI	GAGTC	3 cut(s)	122, 692, 707
MmeI	TCCRAC	1 cut(s)	1097
MroXI	GAANNNNTTC	2 cut(s)	543, 826
MseI	TTAA	3 cut(s)	362, 566, 1641
MspA1I	CMGCKG	1 cut(s)	656
MspCI	CTTAAG	1 cut(s)	1640
MspI	CCGG	2 cut(s)	531, 1097
MspR9I	CCNGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
Mva1269I	GAATGC	3 cut(s)	226, 309, 826
MvaI	CCWGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
MvnI	CGCG	2 cut(s)	950, 1490
MwoI	GCNNNNNNNGC	9 cut(s)	586, 595, 815, 926, 1136, 1264, 1279, 1454, 1468
NcoI	CCATGG	1 cut(s)	1349
NdeI	CATATG	2 cut(s)	187, 516
NdeII	GATC	4 cut(s)	904, 964, 1193, 1606
NheI	GCTAGC	1 cut(s)	814
NlaIII	CATG	5 cut(s)	418, 602, 1353, 1391, 1444
NlaIV	GGNNCC	5 cut(s)	770, 874, 1195, 1498, 1550
NmuCI	GTSAC	3 cut(s)	410, 710, 1049
NspI	RCATGY	2 cut(s)	418, 1444
PaqCI	CACCTGC	1 cut(s)	979
PceI	AGGCCT	1 cut(s)	1462
PcsI	WCGNNNNNNNCGW	1 cut(s)	567
PctI	GAATGC	3 cut(s)	226, 309, 826
PdmI	GAANNNNTTC	2 cut(s)	543, 826
PfeI	GAWTC	2 cut(s)	380, 511
PflFI	GACNNNGTC	1 cut(s)	555
PflMI	CCANNNNNTGG	2 cut(s)	1667, 1696
PfoI	TCCNGGA	1 cut(s)	1174
PkrI	GCNGC	9 cut(s)	142, 241, 327, 420, 1257, 1281, 1414, 1470, 1564
PleI	GAGTC	3 cut(s)	122, 692, 707
PpsI	GAGTC	3 cut(s)	122, 692, 707
Ppu21I	YACGTR	1 cut(s)	1407
PshAI	GACNNNNGTC	1 cut(s)	717
Psp124BI	GAGCTC	1 cut(s)	405
Psp6I	CCWGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
PspGI	CCWGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
PspN4I	GGNNCC	5 cut(s)	770, 874, 1195, 1498, 1550
PspPI	GGNCC	5 cut(s)	152, 769, 1234, 1541, 1556
PstI	CTGCAG	1 cut(s)	1567
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	3 cut(s)	904, 1193, 1606
PsyI	GACNNNGTC	1 cut(s)	555
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	5 cut(s)	176, 276, 874, 1405, 1592
RsaNI	GTAC	5 cut(s)	175, 275, 873, 1404, 1591
SacI	GAGCTC	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1030
SaqAI	TTAA	3 cut(s)	362, 566, 1641
SatI	GCNGC	9 cut(s)	141, 240, 326, 419, 1256, 1280, 1413, 1469, 1563
Sau3AI	GATC	4 cut(s)	904, 964, 1193, 1606
Sau96I	GGNCC	5 cut(s)	152, 769, 1234, 1541, 1556
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	3 cut(s)	122, 692, 707
ScrFI	CCNGG	7 cut(s)	377, 1176, 1185, 1365, 1539, 1554, 1686
SduI	GDGCHC	3 cut(s)	405, 1225, 1553
SfaNI	GCATC	7 cut(s)	175, 226, 592, 677, 929, 1109, 1364
SfcI	CTRYAG	3 cut(s)	345, 606, 1563
SinI	GGWCC	3 cut(s)	769, 1541, 1556
SmlI	CTYRAG	4 cut(s)	288, 319, 406, 1640
SmoI	CTYRAG	4 cut(s)	288, 319, 406, 1640
SnaBI	TACGTA	1 cut(s)	1407
SseBI	AGGCCT	1 cut(s)	1462
SsiI	CCGC	8 cut(s)	202, 325, 666, 1137, 1256, 1395, 1412, 1488
SspMI	CTAG	4 cut(s)	309, 735, 815, 1545
SstI	GAGCTC	1 cut(s)	405
StuI	AGGCCT	1 cut(s)	1462
StyD4I	CCNGG	7 cut(s)	375, 1174, 1183, 1363, 1537, 1552, 1684
StyI	CCWWGG	4 cut(s)	1217, 1349, 1544, 1690
TaaI	ACNGT	3 cut(s)	575, 1109, 1403
TaiI	ACGT	2 cut(s)	764, 1409
TaqI	TCGA	3 cut(s)	561, 820, 1031
TaqII	GACCGA	1 cut(s)	456
TatI	WGTACW	1 cut(s)	174
TauI	GCSGC	3 cut(s)	328, 1258, 1415
TfiI	GAWTC	2 cut(s)	380, 511
Tru1I	TTAA	3 cut(s)	362, 566, 1641
Tru9I	TTAA	3 cut(s)	362, 566, 1641
TscAI	CASTG	5 cut(s)	491, 883, 930, 1054, 1507
TseFI	GTSAC	3 cut(s)	410, 710, 1049
TseI	GCWGC	6 cut(s)	140, 239, 418, 1279, 1468, 1562
Tsp45I	GTSAC	3 cut(s)	410, 710, 1049
TspDTI	ATGAA	9 cut(s)	474, 503, 552, 795, 801, 816, 1106, 1470, 1570
TspGWI	ACGGA	3 cut(s)	897, 903, 1533
TspRI	CASTG	5 cut(s)	491, 883, 930, 1054, 1507
Tth111I	GACNNNGTC	1 cut(s)	555
Van91I	CCANNNNNTGG	2 cut(s)	1667, 1696
Vha464I	CTTAAG	1 cut(s)	1640
VpaK11BI	GGWCC	3 cut(s)	769, 1541, 1556
XagI	CCTNNNNNAGG	1 cut(s)	1563
XapI	RAATTY	3 cut(s)	268, 358, 803
XceI	RCATGY	2 cut(s)	418, 1444
XcmI	CCANNNNNNNNNTGG	2 cut(s)	883, 1172
XmaJI	CCTAGG	1 cut(s)	1544
XmiI	GTMKAC	1 cut(s)	1031
XmnI	GAANNNNTTC	2 cut(s)	543, 826
XspI	CTAG	4 cut(s)	309, 735, 815, 1545
ZrmI	AGTACT	1 cut(s)	176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.