Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Reverse (-)

40602220 .. 40606930

Gene Structure 4711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024944

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGCAGGTAAGGGATAAGATTTTGATATTGGTGGACTCTTGGCAAGCAGCTTTTGGTGGGCCTTCAGGAAAGCATCCTCAGTATTATTGGGCATATGATGAGCTAAGGCGATCTGGAGTAGAGTTTCCTAAGCATTCCTTAGATGCAGCTCCAATGTTTGCACCACCTGTTGCAAATTCAGTACCAAGACCTTCTCAAGCTGGATATGGAATGCCTAGCAATTCCTCAAGGCGGCTTGATGAGACAATGGCTACAGAAAACGAAAATTTAACTTTGACAAGCCTGGATTCTATGAGGGATGTTATGGAGCTCTTGAGTGACATGCTGCAAGCTGTGAACCCTAATGACCGATTGGGTGTAAAAGATGAAGTCATAGTTGAACTTGTCAACCAGTGTCGTGCCAACCAGAAAAAGCTGATTCATATGCTAACTACAACCGGAGATGAAGAACTTCTTGGACAGGGTCTCGAATTAAACGACAGTCTGCAAAGTTTGCTTGCAAAGCATGATGCTATAGCTTCTGGTTTACCTTTGCCAACTGCAAACTTTAGTCCTCAACCAGCTGAAATGCCCGCATCCAGTTCCAAGCATACTGAAGCAAAAGACTCCAGCACAAGTGACTCCAGTCCAAGACCTAAAGCTAGTCCCTCTGCACCAGTTGTTACCACGTCAAGGGTCCAAATTGATGAAGATGAAGAAGAGGAAGATGAATTTGCACAGCTAGCTCGAAGGCATTCCAAACAAAGTTCCTCCAAGCCTACTGAAAGCACACCTAATGGTACCAGTGAAGGTTTGGCATTGGTAAGCGTAGATCCATCTCCATCAGCATCAGTGGCAACATCTGTCCCAAACAATGCATTAGTTCTGTCTGATCCACCTGCTTCAACTAAGACTACACAAGAGCAGAACATAATTGACCTACTGAGTATCACTTTGTCGACAACAGCAATCTCCAGTGACACCTCTCCTCCTCCTCCAACATCTGTCCCTCCCCCACTTCCGGCATCTAACGGTAATGTTCATCAGATACCTGCTTCCCCCGCTATACAAGGCAATCCCTATCCTTCCCAAGCTTATCCTGGAAATCCTGGGCTTGGATCCTACAACAGCTATGTTGTTCCTTGGGCACAACCTCAGGCCCAACAACCTCAATTCAGGCCGCAATTACAGCCACAGCAACCTCAATTCCAGTCGCAGTTTCAACCTCAATATCCCCAATACTCTTCTGCCTACCCTCCTCCACCATGGGCATCTTCTCCTGGTTATCCTAACAACCAAAATCATGTGTCCACCAATAGTACATATGCGACTCCTCACACCAACACAACAGCTTACATGCCAGCGCAAGGAGCAAGGCCTTTGCAGCAGTATAATTCGTTCCCCGCGAGAGGAACCACTGGGTCAGATAACCACGGAGGTTTCCCAACAAATCCTGGTCCTAGGAGCCCTGGACCTGCTGCAGGACAAAAGCCCTTCATTCCCTCGTACCGATTATTTGAAGATCTGAATGTTTTTGGCAATGCTGATGGAAAGCTTAAGGTGGCGAACAGCAACCCATCATCTGGCTTCTCTGGAACTCCAGGCCAAGGTATGGTGGGTGGGAGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

537

Amino Acids

57.33

Weight (kDa)

5.34

Isoelectric Point (pI)

60.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAT	PF03127	101 - 175	5.2e-19	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	886
Acc36I	ACCTGC	3 cut(s)	886, 1039, 1462
Acc65I	GGTACC	1 cut(s)	779
AccB1I	GGYRCC	1 cut(s)	779
AccB7I	CCANNNNNTGG	2 cut(s)	1562, 1591
AccI	GTMKAC	1 cut(s)	938
AccII	CGCG	1 cut(s)	1385
AciI	CCGC	5 cut(s)	232, 573, 1041, 1160, 1383
AclWI	GGATC	4 cut(s)	806, 866, 1092, 1105
AcsI	RAATTY	3 cut(s)	175, 265, 710
AcuI	CTGAAG	2 cut(s)	48, 615
AfaI	GTAC	4 cut(s)	183, 781, 1300, 1487
AflII	CTTAAG	1 cut(s)	1535
AgsI	TTSAA	4 cut(s)	380, 885, 1202, 1499
AjiI	CACGTC	1 cut(s)	669
AjnI	CCWGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
AjuI	GAANNNNNNNTTGG	2 cut(s)	438, 470
Alw21I	GWGCWC	1 cut(s)	312
Alw26I	GTCTC	2 cut(s)	236, 470
AlwI	GGATC	4 cut(s)	806, 866, 1092, 1105
AoxI	GGCC	5 cut(s)	59, 1137, 1157, 1355, 1582
ApeKI	GCWGC	5 cut(s)	47, 146, 325, 1363, 1457
ApoI	RAATTY	3 cut(s)	175, 265, 710
Asp700I	GAANNNNTTC	2 cut(s)	450, 733
Asp718I	GGTACC	1 cut(s)	779
AspA2I	CCTAGG	1 cut(s)	1439
AspLEI	GCGC	1 cut(s)	1345
AspS9I	GGNCC	5 cut(s)	59, 676, 1138, 1436, 1451
AsuNHI	GCTAGC	1 cut(s)	721
AvaII	GGWCC	3 cut(s)	676, 1436, 1451
AvrII	CCTAGG	1 cut(s)	1439
AxyI	CCTNAGG	1 cut(s)	1134
BaeGI	GKGCMC	1 cut(s)	1129
BamHI	GGATCC	1 cut(s)	1097
BanI	GGYRCC	1 cut(s)	779
BanII	GRGCYC	2 cut(s)	312, 1448
Bbv12I	GWGCWC	1 cut(s)	312
BbvI	GCAGC	5 cut(s)	59, 158, 312, 1375, 1444
BccI	CCATC	4 cut(s)	823, 829, 1520, 1564
BciT130I	CCWGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
BcoDI	GTCTC	2 cut(s)	236, 470
BfaI	CTAG	4 cut(s)	216, 642, 722, 1440
BfmI	CTRYAG	3 cut(s)	252, 513, 1458
BfrI	CTTAAG	1 cut(s)	1535
BfuAI	ACCTGC	3 cut(s)	886, 1039, 1462
BglII	AGATCT	1 cut(s)	1501
BisI	GCNGC	7 cut(s)	48, 147, 233, 326, 1160, 1364, 1458
BlnI	CCTAGG	1 cut(s)	1439
BlsI	GCNGC	7 cut(s)	49, 148, 234, 327, 1161, 1365, 1459
Bme1390I	CCNGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
Bme18I	GGWCC	3 cut(s)	676, 1436, 1451
BmgBI	CACGTC	1 cut(s)	669
BmgT120I	GGNCC	5 cut(s)	59, 676, 1138, 1436, 1451
BmiI	GGNNCC	5 cut(s)	677, 781, 1099, 1393, 1445
BmrFI	CCNGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
BmrI	ACTGGG	1 cut(s)	1407
BmsI	GCATC	7 cut(s)	82, 133, 499, 584, 836, 1013, 1259
BmtI	GCTAGC	1 cut(s)	725
BmuI	ACTGGG	1 cut(s)	1407
BoxI	GACNNNNGTC	1 cut(s)	624
BpmI	CTGGAG	5 cut(s)	135, 592, 607, 937, 1563
Bpu10I	CCTNAGC	2 cut(s)	104, 129
BpuEI	CTTGAG	3 cut(s)	180, 211, 334
BsaI	GGTCTC	1 cut(s)	470
BsaJI	CCNNGG	7 cut(s)	1088, 1121, 1244, 1411, 1439, 1447, 1585
BsaWI	WCCGGW	1 cut(s)	437
BsaXI	ACNNNNNCTCC	2 cut(s)	952, 982
Bse1I	ACTGG	8 cut(s)	391, 579, 624, 656, 783, 954, 1189, 1402
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	1 cut(s)	1525
BseBI	CCWGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
BseDI	CCNNGG	7 cut(s)	1088, 1121, 1244, 1411, 1439, 1447, 1585
BseGI	GGATG	3 cut(s)	73, 304, 575
BseMI	GCAATG	1 cut(s)	1525
BseMII	CTCAG	3 cut(s)	92, 914, 1148
BseNI	ACTGG	8 cut(s)	391, 579, 624, 656, 783, 954, 1189, 1402
BseRI	GAGGAG	5 cut(s)	957, 960, 963, 1227, 1302
BseSI	GKGCMC	1 cut(s)	1129
BseXI	GCAGC	5 cut(s)	59, 158, 312, 1375, 1444
BsgI	GTGCAG	1 cut(s)	636
Bsh1236I	CGCG	1 cut(s)	1385
BshFI	GGCC	5 cut(s)	61, 1139, 1159, 1357, 1584
BshNI	GGYRCC	1 cut(s)	779
BsiHKAI	GWGCWC	1 cut(s)	312
BsiSI	CCGG	2 cut(s)	438, 1001
BslFI	GGGAC	3 cut(s)	630, 830, 971
BsmAI	GTCTC	2 cut(s)	236, 470
BsmFI	GGGAC	3 cut(s)	630, 830, 971
BsmI	GAATGC	3 cut(s)	133, 216, 733
BsnI	GGCC	5 cut(s)	61, 1139, 1159, 1357, 1584
Bso31I	GGTCTC	1 cut(s)	470
Bsp1286I	GDGCHC	3 cut(s)	312, 1129, 1448
Bsp143I	GATC	5 cut(s)	110, 811, 871, 1097, 1501
Bsp19I	CCATGG	1 cut(s)	1244
BspACI	CCGC	5 cut(s)	232, 573, 1041, 1160, 1383
BspANI	GGCC	5 cut(s)	61, 1139, 1159, 1357, 1584
BspCNI	CTCAG	3 cut(s)	91, 915, 1147
BspFNI	CGCG	1 cut(s)	1385
BspLI	GGNNCC	5 cut(s)	677, 781, 1099, 1393, 1445
BspMAI	CTGCAG	1 cut(s)	1462
BspMI	ACCTGC	3 cut(s)	886, 1039, 1462
BspOI	GCTAGC	1 cut(s)	725
BspPI	GGATC	4 cut(s)	806, 866, 1092, 1105
BspT107I	GGYRCC	1 cut(s)	779
BspTI	CTTAAG	1 cut(s)	1535
BspTNI	GGTCTC	1 cut(s)	470
BsrDI	GCAATG	1 cut(s)	1525
BsrI	ACTGG	8 cut(s)	391, 579, 624, 656, 783, 954, 1189, 1402
BssECI	CCNNGG	7 cut(s)	1088, 1121, 1244, 1411, 1439, 1447, 1585
BssMI	GATC	5 cut(s)	110, 811, 871, 1097, 1501
BssT1I	CCWWGG	4 cut(s)	1121, 1244, 1439, 1585
Bst2UI	CCWGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
Bst4CI	ACNGT	2 cut(s)	482, 1013
Bst6I	CTCTTC	2 cut(s)	693, 1228
BstAFI	CTTAAG	1 cut(s)	1535
BstAPI	GCANNNNNTGC	1 cut(s)	493
BstC8I	GCNNGC	6 cut(s)	45, 330, 498, 573, 723, 1341
BstDEI	CTNAG	7 cut(s)	78, 104, 129, 139, 888, 923, 1134
BstDSI	CCRYGG	2 cut(s)	1244, 1411
BstENI	CCTNNNNNAGG	1 cut(s)	1458
BstF5I	GGATG	3 cut(s)	73, 304, 575
BstFNI	CGCG	1 cut(s)	1385
BstHHI	GCGC	1 cut(s)	1345
BstKTI	GATC	5 cut(s)	113, 814, 874, 1100, 1504
BstMAI	GTCTC	2 cut(s)	236, 470
BstMBI	GATC	5 cut(s)	110, 811, 871, 1097, 1501
BstMWI	GCNNNNNNNGC	8 cut(s)	493, 502, 722, 833, 1040, 1168, 1349, 1363
BstNI	CCWGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
BstNSI	RCATGY	2 cut(s)	325, 1339
BstPAI	GACNNNNGTC	1 cut(s)	624
BstSCI	CCNGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
BstSFI	CTRYAG	3 cut(s)	252, 513, 1458
BstSLI	GKGCMC	1 cut(s)	1129
BstUI	CGCG	1 cut(s)	1385
BstV1I	GCAGC	5 cut(s)	59, 158, 312, 1375, 1444
BstX2I	RGATCY	3 cut(s)	811, 1097, 1501
BstYI	RGATCY	3 cut(s)	811, 1097, 1501
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuRI	GGCC	5 cut(s)	61, 1139, 1159, 1357, 1584
BtgI	CCRYGG	2 cut(s)	1244, 1411
BtrI	CACGTC	1 cut(s)	669
BtsCI	GGATG	3 cut(s)	73, 304, 575
BtsIMutI	CAGTG	5 cut(s)	398, 790, 837, 961, 1395
BveI	ACCTGC	3 cut(s)	886, 1039, 1462
Cac8I	GCNNGC	6 cut(s)	45, 330, 498, 573, 723, 1341
CfoI	GCGC	1 cut(s)	1345
Cfr13I	GGNCC	5 cut(s)	59, 676, 1138, 1436, 1451
Csp6I	GTAC	4 cut(s)	182, 780, 1299, 1486
CviAII	CATG	5 cut(s)	322, 506, 1245, 1283, 1336
CviQI	GTAC	4 cut(s)	182, 780, 1299, 1486
DdeI	CTNAG	7 cut(s)	78, 104, 129, 139, 888, 923, 1134
DpnI	GATC	5 cut(s)	112, 813, 873, 1099, 1503
DpnII	GATC	5 cut(s)	110, 811, 871, 1097, 1501
Eam1104I	CTCTTC	2 cut(s)	693, 1228
EarI	CTCTTC	2 cut(s)	693, 1228
Ecl136II	GAGCTC	1 cut(s)	310
Eco130I	CCWWGG	4 cut(s)	1121, 1244, 1439, 1585
Eco147I	AGGCCT	1 cut(s)	1357
Eco24I	GRGCYC	2 cut(s)	312, 1448
Eco31I	GGTCTC	1 cut(s)	470
Eco47I	GGWCC	3 cut(s)	676, 1436, 1451
Eco53kI	GAGCTC	1 cut(s)	310
Eco57I	CTGAAG	2 cut(s)	48, 615
Eco81I	CCTNAGG	1 cut(s)	1134
EcoICRI	GAGCTC	1 cut(s)	310
EcoNI	CCTNNNNNAGG	1 cut(s)	1458
EcoRII	CCWGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
EcoT14I	CCWWGG	4 cut(s)	1121, 1244, 1439, 1585
EcoT22I	ATGCAT	1 cut(s)	859
EcoT38I	GRGCYC	2 cut(s)	312, 1448
ErhI	CCWWGG	4 cut(s)	1121, 1244, 1439, 1585
FaeI	CATG	5 cut(s)	325, 509, 1248, 1286, 1339
FalI	AAGNNNNNCTT	4 cut(s)	122, 154, 438, 470
FaqI	GGGAC	3 cut(s)	630, 830, 971
FatI	CATG	5 cut(s)	321, 505, 1244, 1282, 1335
FauI	CCCGC	3 cut(s)	580, 1048, 1390
FauNDI	CATATG	3 cut(s)	94, 423, 1303
FblI	GTMKAC	1 cut(s)	938
Fnu4HI	GCNGC	7 cut(s)	48, 147, 233, 326, 1160, 1364, 1458
FokI	GGATG	3 cut(s)	60, 311, 562
FriOI	GRGCYC	2 cut(s)	312, 1448
Fsp4HI	GCNGC	7 cut(s)	48, 147, 233, 326, 1160, 1364, 1458
FspBI	CTAG	4 cut(s)	216, 642, 722, 1440
GlaI	GCGC	1 cut(s)	1344
GluI	GCNGC	7 cut(s)	48, 147, 233, 326, 1160, 1364, 1458
GsuI	CTGGAG	5 cut(s)	135, 592, 607, 937, 1563
HaeIII	GGCC	5 cut(s)	61, 1139, 1159, 1357, 1584
HapII	CCGG	2 cut(s)	438, 1001
HhaI	GCGC	1 cut(s)	1345
Hin1II	CATG	5 cut(s)	325, 509, 1248, 1286, 1339
Hin6I	GCGC	1 cut(s)	1343
HinP1I	GCGC	1 cut(s)	1343
HincII	GTYRAC	2 cut(s)	388, 939
HindII	GTYRAC	2 cut(s)	388, 939
HindIII	AAGCTT	2 cut(s)	1071, 1532
HinfI	GANTC	6 cut(s)	35, 287, 418, 605, 620, 1309
HpaII	CCGG	2 cut(s)	438, 1001
Hpy166II	GTNNAC	6 cut(s)	34, 337, 388, 527, 939, 1290
Hpy188I	TCNGA	4 cut(s)	871, 1026, 1405, 1506
Hpy188III	TCNNGA	5 cut(s)	66, 114, 313, 467, 1572
Hpy8I	GTNNAC	6 cut(s)	34, 337, 388, 527, 939, 1290
HpyAV	CCTTC	6 cut(s)	72, 201, 723, 782, 1074, 1483
HpyCH4III	ACNGT	2 cut(s)	482, 1013
HpyCH4IV	ACGT	1 cut(s)	668
HpyF10VI	GCNNNNNNNGC	8 cut(s)	493, 502, 722, 833, 1040, 1168, 1349, 1363
HpyF3I	CTNAG	7 cut(s)	78, 104, 129, 139, 888, 923, 1134
HpySE526I	ACGT	1 cut(s)	668
Hsp92II	CATG	5 cut(s)	325, 509, 1248, 1286, 1339
HspAI	GCGC	1 cut(s)	1343
KpnI	GGTACC	1 cut(s)	783
Kzo9I	GATC	5 cut(s)	110, 811, 871, 1097, 1501
LmnI	GCTCC	4 cut(s)	154, 307, 1349, 1443
Lsp1109I	GCAGC	5 cut(s)	59, 158, 312, 1375, 1444
LweI	GCATC	7 cut(s)	82, 133, 499, 584, 836, 1013, 1259
MaeI	CTAG	4 cut(s)	216, 642, 722, 1440
MaeII	ACGT	1 cut(s)	668
MaeIII	GTNAC	4 cut(s)	317, 617, 661, 956
MalI	GATC	5 cut(s)	112, 813, 873, 1099, 1503
MboI	GATC	5 cut(s)	110, 811, 871, 1097, 1501
MboII	GAAGA	8 cut(s)	458, 701, 707, 710, 716, 1215, 1245, 1511
MflI	RGATCY	3 cut(s)	811, 1097, 1501
MhlI	GDGCHC	3 cut(s)	312, 1129, 1448
MlyI	GAGTC	4 cut(s)	29, 599, 614, 1303
MmeI	TCCRAC	1 cut(s)	1001
Mph1103I	ATGCAT	1 cut(s)	859
MroXI	GAANNNNTTC	2 cut(s)	450, 733
MseI	TTAA	3 cut(s)	269, 473, 1536
MspA1I	CMGCKG	1 cut(s)	563
MspCI	CTTAAG	1 cut(s)	1535
MspI	CCGG	2 cut(s)	438, 1001
MspR9I	CCNGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
Mva1269I	GAATGC	3 cut(s)	133, 216, 733
MvaI	CCWGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
MvnI	CGCG	1 cut(s)	1385
MwoI	GCNNNNNNNGC	8 cut(s)	493, 502, 722, 833, 1040, 1168, 1349, 1363
NcoI	CCATGG	1 cut(s)	1244
NdeI	CATATG	3 cut(s)	94, 423, 1303
NdeII	GATC	5 cut(s)	110, 811, 871, 1097, 1501
NheI	GCTAGC	1 cut(s)	721
NlaIII	CATG	5 cut(s)	325, 509, 1248, 1286, 1339
NlaIV	GGNNCC	5 cut(s)	677, 781, 1099, 1393, 1445
NmuCI	GTSAC	3 cut(s)	317, 617, 956
NsiI	ATGCAT	1 cut(s)	859
NspI	RCATGY	2 cut(s)	325, 1339
PaqCI	CACCTGC	1 cut(s)	886
PceI	AGGCCT	1 cut(s)	1357
PcsI	WCGNNNNNNNCGW	2 cut(s)	474, 1382
PctI	GAATGC	3 cut(s)	133, 216, 733
PdmI	GAANNNNTTC	2 cut(s)	450, 733
PfeI	GAWTC	2 cut(s)	287, 418
PflFI	GACNNNGTC	1 cut(s)	462
PflMI	CCANNNNNTGG	2 cut(s)	1562, 1591
PfoI	TCCNGGA	1 cut(s)	1078
PkrI	GCNGC	7 cut(s)	49, 148, 234, 327, 1161, 1365, 1459
PleI	GAGTC	4 cut(s)	29, 599, 614, 1303
PpsI	GAGTC	4 cut(s)	29, 599, 614, 1303
PshAI	GACNNNNGTC	1 cut(s)	624
Psp124BI	GAGCTC	1 cut(s)	312
Psp6I	CCWGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
PspGI	CCWGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
PspN4I	GGNNCC	5 cut(s)	677, 781, 1099, 1393, 1445
PspPI	GGNCC	5 cut(s)	59, 676, 1138, 1436, 1451
PsrI	GAACNNNNNNTAC	2 cut(s)	1361, 1393
PstI	CTGCAG	1 cut(s)	1462
PsuI	RGATCY	3 cut(s)	811, 1097, 1501
PsyI	GACNNNGTC	1 cut(s)	462
PvuII	CAGCTG	1 cut(s)	563
RsaI	GTAC	4 cut(s)	183, 781, 1300, 1487
RsaNI	GTAC	4 cut(s)	182, 780, 1299, 1486
SacI	GAGCTC	1 cut(s)	312
SalI	GTCGAC	1 cut(s)	937
SaqAI	TTAA	3 cut(s)	269, 473, 1536
SatI	GCNGC	7 cut(s)	48, 147, 233, 326, 1160, 1364, 1458
Sau3AI	GATC	5 cut(s)	110, 811, 871, 1097, 1501
Sau96I	GGNCC	5 cut(s)	59, 676, 1138, 1436, 1451
SchI	GAGTC	4 cut(s)	29, 599, 614, 1303
ScrFI	CCNGG	7 cut(s)	284, 1080, 1089, 1260, 1434, 1449, 1581
SduI	GDGCHC	3 cut(s)	312, 1129, 1448
SfaNI	GCATC	7 cut(s)	82, 133, 499, 584, 836, 1013, 1259
SfcI	CTRYAG	3 cut(s)	252, 513, 1458
SinI	GGWCC	3 cut(s)	676, 1436, 1451
SmlI	CTYRAG	4 cut(s)	195, 226, 313, 1535
SmoI	CTYRAG	4 cut(s)	195, 226, 313, 1535
SseBI	AGGCCT	1 cut(s)	1357
SsiI	CCGC	5 cut(s)	232, 573, 1041, 1160, 1383
SspMI	CTAG	4 cut(s)	216, 642, 722, 1440
SstI	GAGCTC	1 cut(s)	312
StuI	AGGCCT	1 cut(s)	1357
StyD4I	CCNGG	7 cut(s)	282, 1078, 1087, 1258, 1432, 1447, 1579
StyI	CCWWGG	4 cut(s)	1121, 1244, 1439, 1585
TaaI	ACNGT	2 cut(s)	482, 1013
TaiI	ACGT	1 cut(s)	671
TaqI	TCGA	3 cut(s)	468, 727, 938
TaqII	GACCGA	1 cut(s)	363
TatI	WGTACW	1 cut(s)	1298
TauI	GCSGC	2 cut(s)	235, 1162
TfiI	GAWTC	2 cut(s)	287, 418
Tru1I	TTAA	3 cut(s)	269, 473, 1536
Tru9I	TTAA	3 cut(s)	269, 473, 1536
TscAI	CASTG	5 cut(s)	398, 790, 837, 961, 1402
TseFI	GTSAC	3 cut(s)	317, 617, 956
TseI	GCWGC	5 cut(s)	47, 146, 325, 1363, 1457
Tsp45I	GTSAC	3 cut(s)	317, 617, 956
TspDTI	ATGAA	8 cut(s)	381, 410, 459, 702, 708, 723, 1010, 1465
TspGWI	ACGGA	1 cut(s)	1428
TspRI	CASTG	5 cut(s)	398, 790, 837, 961, 1402
Tth111I	GACNNNGTC	1 cut(s)	462
Van91I	CCANNNNNTGG	2 cut(s)	1562, 1591
Vha464I	CTTAAG	1 cut(s)	1535
VpaK11BI	GGWCC	3 cut(s)	676, 1436, 1451
XagI	CCTNNNNNAGG	1 cut(s)	1458
XapI	RAATTY	3 cut(s)	175, 265, 710
XceI	RCATGY	2 cut(s)	325, 1339
XcmI	CCANNNNNNNNNTGG	2 cut(s)	790, 1076
XmaJI	CCTAGG	1 cut(s)	1439
XmiI	GTMKAC	1 cut(s)	938
XmnI	GAANNNNTTC	2 cut(s)	450, 733
XspI	CTAG	4 cut(s)	216, 642, 722, 1440
Zsp2I	ATGCAT	1 cut(s)	859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.