Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000326.1

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Reverse (-)

61327 .. 65456

Gene Structure 4130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000326.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

atgatagtggccacgtcagcgtcgtcgtcgtcgtcttcggccagtgtggcggtggacaaggcgacgagcgatcttctgataaaccctgattggacgatgaacatcgatatctgtgattccgtcaattctcatcagtggcaggcaaaagatgtcgtaaaagctgtaaaaagaaggttgcagcataagaaccccaaagttcaattccttgctttgacgctattggagacaatggtgaagaattgtggtgattatatccattttcaaattgcagagaggaatatattgggagagatgataaaaattgtgaggaagaagtcagatatgcaggtaagggataagattttgatattggtggactcttggcaagcagcttttggtgggccttcaggaaagcatcctcagtactattgggcatatgatgagctaaggcggtctggagtagagtttcctaagcattccttagatgcagctccaatgtttgcaccacctgttgcaaattcagtaccaagaccttctcaagctggatatggaatgcctagcaattcctcaaggcggcttgatgagacaatggctacagaaaacgaaaatttaactttgacaagcctggattctatgagggatgttatggagctcttgagtgacatgctgcaagctgtgaaccctaatgaccgattgggtgtaaaagatgaagtcatagttgaacttgtcaaccagtgtcgtgccaaccagaaaaagctgattcatatgctaactacaaccggagatgaagaacttcttggacggggtctcgaattaaacgacagtctgcaaagtttgcttgcaaagcatgatgctatagcttctggtttacctttgccaactgcaaactttagtcctcaatcagctgaaatgcccgcatccagttccaagcatactgaagcaaaagactccagcataagtgactccagtccaagacctaaagccagtccctctgcaccagttgttaccacgtcaagggtccaaattgatgaagatgaagaagaggaagatgaatttgcacagctagctcgaaggcattccaaacaaagtacctccaagcctactgaaagcacacctaatggtaccagtgaaggtttggcattggtaagcgtagatccgtctcagtctgcatcagtggcaacatctgtcccaaacaacgcgttagttctgtctgatccacctgcttcaagtaagactacacaagagcagaacataattgacctactgagtatcactttgtcgacaacagcaatctccagtgacacctctcctcctcctcctcctcctccaacatctgtccctcccccacttccggcatctaacggtaatgttcatcagatacctgcttcccccgctatacaaggcaatccctatccttcccaagcttatcctggaaatcctgggcttggatcctacaacagctatgttgttccttgggcacaacctcaggcccaacaacctcaattcaggccacaattacagccacagcaacagcagcaacctcaattccagtcgcagtttcaacctcaatatccccaatactcttctgcctaccctcctccaccatgggcatcttctcctggttatcttaacaaccaaaatcatgtgtccgccaatagtacgtacgcggctcctcacaccaacacaacggcttacatgccagcgcaaggagcaaggcctttgcagcagtataattcgttccccgcgagaggaaccactgggtcagataacaacggaggtttcccaacaaatcctggtcctaggagccctggacctgctgcaggacaaaagcccttcattccctcgtacagattatttgaagatctgaatgtttttggcaatgctgatggaaagcttaaggtggcgaacagcaacccatcatctggcttctctggaactccaggccaaggtatggtgggtgggaggaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

649

Amino Acids

69.92

Weight (kDa)

5.88

Isoelectric Point (pI)

57.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1207
Acc36I	ACCTGC	4 cut(s)	316, 1207, 1369, 1801
Acc65I	GGTACC	1 cut(s)	1100
AccB1I	GGYRCC	1 cut(s)	1100
AccB7I	CCANNNNNTGG	2 cut(s)	1901, 1930
AccI	GTMKAC	1 cut(s)	1259
AccII	CGCG	3 cut(s)	1178, 1646, 1724
AciI	CCGC	8 cut(s)	50, 430, 553, 894, 1371, 1629, 1646, 1722
AclWI	GGATC	4 cut(s)	1127, 1187, 1422, 1435
AcoI	YGGCCR	2 cut(s)	9, 39
AcsI	RAATTY	3 cut(s)	496, 586, 1031
AcuI	CTGAAG	2 cut(s)	369, 936
AfaI	GTAC	7 cut(s)	404, 504, 1069, 1102, 1639, 1643, 1826
AflII	CTTAAG	1 cut(s)	1874
AflIII	ACRYGT	1 cut(s)	1176
AgsI	TTSAA	6 cut(s)	200, 263, 701, 1206, 1541, 1838
AjiI	CACGTC	2 cut(s)	15, 990
AjnI	CCWGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
AjuI	GAANNNNNNNTTGG	4 cut(s)	185, 217, 759, 791
Alw21I	GWGCWC	1 cut(s)	633
Alw26I	GTCTC	4 cut(s)	218, 557, 791, 1143
AlwI	GGATC	4 cut(s)	1127, 1187, 1422, 1435
AoxI	GGCC	7 cut(s)	9, 39, 380, 1467, 1487, 1694, 1921
ApeKI	GCWGC	7 cut(s)	178, 368, 467, 646, 1513, 1702, 1796
ApoI	RAATTY	3 cut(s)	496, 586, 1031
Asp700I	GAANNNNTTC	2 cut(s)	771, 1054
Asp718I	GGTACC	1 cut(s)	1100
AspA2I	CCTAGG	1 cut(s)	1778
AspLEI	GCGC	1 cut(s)	1684
AspS9I	GGNCC	5 cut(s)	380, 997, 1468, 1775, 1790
AsuHPI	GGTGA	2 cut(s)	244, 257
AsuNHI	GCTAGC	1 cut(s)	1042
AvaII	GGWCC	3 cut(s)	997, 1775, 1790
AvrII	CCTAGG	1 cut(s)	1778
AxyI	CCTNAGG	1 cut(s)	1464
BaeGI	GKGCMC	1 cut(s)	1459
BalI	TGGCCA	1 cut(s)	11
BamHI	GGATCC	1 cut(s)	1427
BanI	GGYRCC	1 cut(s)	1100
BanII	GRGCYC	2 cut(s)	633, 1787
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	1 cut(s)	633
BbvI	GCAGC	7 cut(s)	190, 380, 479, 633, 1525, 1714, 1783
BccI	CCATC	2 cut(s)	1859, 1903
BceAI	ACGGC	1 cut(s)	1683
BciT130I	CCWGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
BcoDI	GTCTC	4 cut(s)	218, 557, 791, 1143
BfaI	CTAG	3 cut(s)	537, 1043, 1779
BfmI	CTRYAG	3 cut(s)	573, 834, 1797
BfrI	CTTAAG	1 cut(s)	1874
BfuAI	ACCTGC	4 cut(s)	316, 1207, 1369, 1801
BglI	GCCNNNNNGGC	1 cut(s)	47
BglII	AGATCT	1 cut(s)	1840
BisI	GCNGC	9 cut(s)	179, 369, 468, 554, 647, 1514, 1647, 1703, 1797
BlnI	CCTAGG	1 cut(s)	1778
BlsI	GCNGC	9 cut(s)	180, 370, 469, 555, 648, 1515, 1648, 1704, 1798
BmcAI	AGTACT	1 cut(s)	404
Bme1390I	CCNGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
Bme18I	GGWCC	3 cut(s)	997, 1775, 1790
BmgBI	CACGTC	2 cut(s)	15, 990
BmgT120I	GGNCC	5 cut(s)	380, 997, 1468, 1775, 1790
BmiI	GGNNCC	6 cut(s)	998, 1102, 1429, 1650, 1732, 1784
BmrFI	CCNGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
BmrI	ACTGGG	1 cut(s)	1746
BmsI	GCATC	7 cut(s)	403, 454, 820, 905, 1157, 1343, 1598
BmtI	GCTAGC	1 cut(s)	1046
BmuI	ACTGGG	1 cut(s)	1746
BoxI	GACNNNNGTC	1 cut(s)	945
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	5 cut(s)	456, 913, 928, 1258, 1902
Bpu10I	CCTNAGC	2 cut(s)	425, 450
BpuEI	CTTGAG	3 cut(s)	501, 532, 655
Bsa29I	ATCGAT	1 cut(s)	105
BsaAI	YACGTR	1 cut(s)	1641
BsaBI	GATNNNNATC	1 cut(s)	101
BsaI	GGTCTC	1 cut(s)	791
BsaJI	CCNNGG	6 cut(s)	1418, 1451, 1583, 1778, 1786, 1924
BsaWI	WCCGGW	1 cut(s)	758
BsaXI	ACNNNNNCTCC	2 cut(s)	1273, 1303
Bse21I	CCTNAGG	1 cut(s)	1464
Bse3DI	GCAATG	1 cut(s)	1864
Bse8I	GATNNNNATC	1 cut(s)	101
BseBI	CCWGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
BseCI	ATCGAT	1 cut(s)	105
BseDI	CCNNGG	6 cut(s)	1418, 1451, 1583, 1778, 1786, 1924
BseGI	GGATG	3 cut(s)	394, 625, 896
BseJI	GATNNNNATC	1 cut(s)	101
BseMI	GCAATG	1 cut(s)	1864
BseMII	CTCAG	4 cut(s)	413, 1154, 1235, 1478
BseRI	GAGGAG	8 cut(s)	1278, 1281, 1284, 1287, 1290, 1293, 1566, 1641
BseSI	GKGCMC	1 cut(s)	1459
BseXI	GCAGC	7 cut(s)	190, 380, 479, 633, 1525, 1714, 1783
BsgI	GTGCAG	1 cut(s)	957
Bsh1236I	CGCG	3 cut(s)	1178, 1646, 1724
BshFI	GGCC	7 cut(s)	11, 41, 382, 1469, 1489, 1696, 1923
BshNI	GGYRCC	1 cut(s)	1100
BshVI	ATCGAT	1 cut(s)	105
BsiHKAI	GWGCWC	1 cut(s)	633
BsiSI	CCGG	2 cut(s)	759, 1331
BsiWI	CGTACG	1 cut(s)	1641
BslFI	GGGAC	3 cut(s)	951, 1151, 1301
BsmAI	GTCTC	4 cut(s)	218, 557, 791, 1143
BsmBI	CGTCTC	1 cut(s)	1143
BsmFI	GGGAC	3 cut(s)	951, 1151, 1301
BsmI	GAATGC	3 cut(s)	454, 537, 1054
BsnI	GGCC	7 cut(s)	11, 41, 382, 1469, 1489, 1696, 1923
Bso31I	GGTCTC	1 cut(s)	791
Bsp1286I	GDGCHC	3 cut(s)	633, 1459, 1787
Bsp143I	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
Bsp19I	CCATGG	1 cut(s)	1583
BspACI	CCGC	8 cut(s)	50, 430, 553, 894, 1371, 1629, 1646, 1722
BspANI	GGCC	7 cut(s)	11, 41, 382, 1469, 1489, 1696, 1923
BspCNI	CTCAG	4 cut(s)	412, 1153, 1236, 1477
BspDI	ATCGAT	1 cut(s)	105
BspFNI	CGCG	3 cut(s)	1178, 1646, 1724
BspLI	GGNNCC	6 cut(s)	998, 1102, 1429, 1650, 1732, 1784
BspMAI	CTGCAG	1 cut(s)	1801
BspMI	ACCTGC	4 cut(s)	316, 1207, 1369, 1801
BspOI	GCTAGC	1 cut(s)	1046
BspPI	GGATC	4 cut(s)	1127, 1187, 1422, 1435
BspT107I	GGYRCC	1 cut(s)	1100
BspTI	CTTAAG	1 cut(s)	1874
BspTNI	GGTCTC	1 cut(s)	791
BsrDI	GCAATG	1 cut(s)	1864
BssECI	CCNNGG	6 cut(s)	1418, 1451, 1583, 1778, 1786, 1924
BssMI	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
BssT1I	CCWWGG	4 cut(s)	1451, 1583, 1778, 1924
Bst2UI	CCWGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
Bst4CI	ACNGT	2 cut(s)	803, 1343
Bst6I	CTCTTC	2 cut(s)	1014, 1567
BstAFI	CTTAAG	1 cut(s)	1874
BstAPI	GCANNNNNTGC	1 cut(s)	814
BstBAI	YACGTR	1 cut(s)	1641
BstC8I	GCNNGC	7 cut(s)	141, 366, 651, 819, 894, 1044, 1680
BstDEI	CTNAG	7 cut(s)	399, 425, 450, 460, 1140, 1244, 1464
BstDSI	CCRYGG	1 cut(s)	1583
BstENI	CCTNNNNNAGG	1 cut(s)	1797
BstF5I	GGATG	3 cut(s)	394, 625, 896
BstFNI	CGCG	3 cut(s)	1178, 1646, 1724
BstHHI	GCGC	1 cut(s)	1684
BstKTI	GATC	5 cut(s)	73, 1135, 1195, 1430, 1843
BstMAI	GTCTC	4 cut(s)	218, 557, 791, 1143
BstMBI	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
BstNI	CCWGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
BstNSI	RCATGY	2 cut(s)	646, 1678
BstPAI	GACNNNNGTC	1 cut(s)	945
BstSCI	CCNGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
BstSFI	CTRYAG	3 cut(s)	573, 834, 1797
BstSLI	GKGCMC	1 cut(s)	1459
BstSNI	TACGTA	1 cut(s)	1641
BstUI	CGCG	3 cut(s)	1178, 1646, 1724
BstV1I	GCAGC	7 cut(s)	190, 380, 479, 633, 1525, 1714, 1783
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	3 cut(s)	1132, 1427, 1840
BstYI	RGATCY	3 cut(s)	1132, 1427, 1840
Bsu15I	ATCGAT	1 cut(s)	105
Bsu36I	CCTNAGG	1 cut(s)	1464
BsuRI	GGCC	7 cut(s)	11, 41, 382, 1469, 1489, 1696, 1923
BsuTUI	ATCGAT	1 cut(s)	105
BtgI	CCRYGG	1 cut(s)	1583
BtrI	CACGTC	2 cut(s)	15, 990
BtsCI	GGATG	3 cut(s)	394, 625, 896
BtsIMutI	CAGTG	7 cut(s)	49, 140, 719, 1111, 1158, 1282, 1734
BveI	ACCTGC	4 cut(s)	316, 1207, 1369, 1801
Cac8I	GCNNGC	7 cut(s)	141, 366, 651, 819, 894, 1044, 1680
CfoI	GCGC	1 cut(s)	1684
Cfr13I	GGNCC	5 cut(s)	380, 997, 1468, 1775, 1790
ClaI	ATCGAT	1 cut(s)	105
CseI	GACGC	2 cut(s)	9, 223
Csp6I	GTAC	7 cut(s)	403, 503, 1068, 1101, 1638, 1642, 1825
CviAII	CATG	5 cut(s)	643, 827, 1584, 1622, 1675
CviQI	GTAC	7 cut(s)	403, 503, 1068, 1101, 1638, 1642, 1825
DdeI	CTNAG	7 cut(s)	399, 425, 450, 460, 1140, 1244, 1464
DpnI	GATC	5 cut(s)	72, 1134, 1194, 1429, 1842
DpnII	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
EaeI	YGGCCR	2 cut(s)	9, 39
Eam1104I	CTCTTC	2 cut(s)	1014, 1567
EarI	CTCTTC	2 cut(s)	1014, 1567
EciI	GGCGGA	1 cut(s)	1618
Ecl136II	GAGCTC	1 cut(s)	631
Eco105I	TACGTA	1 cut(s)	1641
Eco130I	CCWWGG	4 cut(s)	1451, 1583, 1778, 1924
Eco147I	AGGCCT	1 cut(s)	1696
Eco24I	GRGCYC	2 cut(s)	633, 1787
Eco31I	GGTCTC	1 cut(s)	791
Eco32I	GATATC	1 cut(s)	109
Eco47I	GGWCC	3 cut(s)	997, 1775, 1790
Eco53kI	GAGCTC	1 cut(s)	631
Eco57I	CTGAAG	2 cut(s)	369, 936
Eco81I	CCTNAGG	1 cut(s)	1464
EcoICRI	GAGCTC	1 cut(s)	631
EcoNI	CCTNNNNNAGG	1 cut(s)	1797
EcoRII	CCWGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
EcoRV	GATATC	1 cut(s)	109
EcoT14I	CCWWGG	4 cut(s)	1451, 1583, 1778, 1924
EcoT38I	GRGCYC	2 cut(s)	633, 1787
ErhI	CCWWGG	4 cut(s)	1451, 1583, 1778, 1924
Esp3I	CGTCTC	1 cut(s)	1143
FaeI	CATG	5 cut(s)	646, 830, 1587, 1625, 1678
FalI	AAGNNNNNCTT	4 cut(s)	443, 475, 759, 791
FaqI	GGGAC	3 cut(s)	951, 1151, 1301
FatI	CATG	5 cut(s)	642, 826, 1583, 1621, 1674
FauI	CCCGC	3 cut(s)	901, 1378, 1729
FauNDI	CATATG	2 cut(s)	415, 744
FblI	GTMKAC	1 cut(s)	1259
Fnu4HI	GCNGC	9 cut(s)	179, 369, 468, 554, 647, 1514, 1647, 1703, 1797
FokI	GGATG	3 cut(s)	381, 632, 883
FriOI	GRGCYC	2 cut(s)	633, 1787
Fsp4HI	GCNGC	9 cut(s)	179, 369, 468, 554, 647, 1514, 1647, 1703, 1797
FspBI	CTAG	3 cut(s)	537, 1043, 1779
GlaI	GCGC	1 cut(s)	1683
GluI	GCNGC	9 cut(s)	179, 369, 468, 554, 647, 1514, 1647, 1703, 1797
GsuI	CTGGAG	5 cut(s)	456, 913, 928, 1258, 1902
HaeIII	GGCC	7 cut(s)	11, 41, 382, 1469, 1489, 1696, 1923
HapII	CCGG	2 cut(s)	759, 1331
HgaI	GACGC	2 cut(s)	9, 223
HhaI	GCGC	1 cut(s)	1684
Hin1II	CATG	5 cut(s)	646, 830, 1587, 1625, 1678
Hin6I	GCGC	1 cut(s)	1682
HinP1I	GCGC	1 cut(s)	1682
HincII	GTYRAC	2 cut(s)	709, 1260
HindII	GTYRAC	2 cut(s)	709, 1260
HindIII	AAGCTT	2 cut(s)	1401, 1871
HinfI	GANTC	6 cut(s)	116, 356, 608, 739, 926, 941
HpaII	CCGG	2 cut(s)	759, 1331
HphI	GGTGA	2 cut(s)	244, 257
Hpy166II	GTNNAC	6 cut(s)	55, 355, 658, 709, 848, 1260
Hpy188I	TCNGA	6 cut(s)	78, 319, 1192, 1356, 1744, 1845
Hpy188III	TCNNGA	5 cut(s)	387, 435, 634, 788, 1911
Hpy8I	GTNNAC	6 cut(s)	55, 355, 658, 709, 848, 1260
Hpy99I	CGWCG	5 cut(s)	25, 28, 31, 34, 67
HpyAV	CCTTC	7 cut(s)	165, 393, 522, 1044, 1103, 1404, 1822
HpyCH4III	ACNGT	2 cut(s)	803, 1343
HpyCH4IV	ACGT	3 cut(s)	14, 989, 1640
HpyF3I	CTNAG	7 cut(s)	399, 425, 450, 460, 1140, 1244, 1464
HpySE526I	ACGT	3 cut(s)	14, 989, 1640
Hsp92II	CATG	5 cut(s)	646, 830, 1587, 1625, 1678
HspAI	GCGC	1 cut(s)	1682
KpnI	GGTACC	1 cut(s)	1104
Kzo9I	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
LmnI	GCTCC	5 cut(s)	475, 628, 1654, 1688, 1782
Lsp1109I	GCAGC	7 cut(s)	190, 380, 479, 633, 1525, 1714, 1783
LweI	GCATC	7 cut(s)	403, 454, 820, 905, 1157, 1343, 1598
MaeI	CTAG	3 cut(s)	537, 1043, 1779
MaeII	ACGT	3 cut(s)	14, 989, 1640
MaeIII	GTNAC	4 cut(s)	638, 938, 982, 1277
MalI	GATC	5 cut(s)	72, 1134, 1194, 1429, 1842
MboI	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
MflI	RGATCY	3 cut(s)	1132, 1427, 1840
MhlI	GDGCHC	3 cut(s)	633, 1459, 1787
MlsI	TGGCCA	1 cut(s)	11
MluI	ACGCGT	1 cut(s)	1176
MluNI	TGGCCA	1 cut(s)	11
MlyI	GAGTC	3 cut(s)	350, 920, 935
MmeI	TCCRAC	1 cut(s)	1331
Mox20I	TGGCCA	1 cut(s)	11
MroXI	GAANNNNTTC	2 cut(s)	771, 1054
MscI	TGGCCA	1 cut(s)	11
MseI	TTAA	4 cut(s)	590, 794, 1608, 1875
Msp20I	TGGCCA	1 cut(s)	11
MspA1I	CMGCKG	1 cut(s)	884
MspCI	CTTAAG	1 cut(s)	1874
MspI	CCGG	2 cut(s)	759, 1331
MspR9I	CCNGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
Mva1269I	GAATGC	3 cut(s)	454, 537, 1054
MvaI	CCWGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
MvnI	CGCG	3 cut(s)	1178, 1646, 1724
NcoI	CCATGG	1 cut(s)	1583
NdeI	CATATG	2 cut(s)	415, 744
NdeII	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
NheI	GCTAGC	1 cut(s)	1042
NlaIII	CATG	5 cut(s)	646, 830, 1587, 1625, 1678
NlaIV	GGNNCC	6 cut(s)	998, 1102, 1429, 1650, 1732, 1784
NmuCI	GTSAC	3 cut(s)	638, 938, 1277
NspI	RCATGY	2 cut(s)	646, 1678
PaqCI	CACCTGC	1 cut(s)	1207
PceI	AGGCCT	1 cut(s)	1696
PcsI	WCGNNNNNNNCGW	4 cut(s)	20, 29, 795, 1721
PctI	GAATGC	3 cut(s)	454, 537, 1054
PdmI	GAANNNNTTC	2 cut(s)	771, 1054
PfeI	GAWTC	3 cut(s)	116, 608, 739
Pfl23II	CGTACG	1 cut(s)	1641
PflFI	GACNNNGTC	1 cut(s)	783
PflMI	CCANNNNNTGG	2 cut(s)	1901, 1930
PfoI	TCCNGGA	1 cut(s)	1408
PkrI	GCNGC	9 cut(s)	180, 370, 469, 555, 648, 1515, 1648, 1704, 1798
PleI	GAGTC	3 cut(s)	350, 920, 935
PpsI	GAGTC	3 cut(s)	350, 920, 935
Ppu21I	YACGTR	1 cut(s)	1641
PshAI	GACNNNNGTC	1 cut(s)	945
Psp124BI	GAGCTC	1 cut(s)	633
Psp6I	CCWGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
PspGI	CCWGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
PspLI	CGTACG	1 cut(s)	1641
PspN4I	GGNNCC	6 cut(s)	998, 1102, 1429, 1650, 1732, 1784
PspPI	GGNCC	5 cut(s)	380, 997, 1468, 1775, 1790
PsrI	GAACNNNNNNTAC	2 cut(s)	1700, 1732
PstI	CTGCAG	1 cut(s)	1801
PsuI	RGATCY	3 cut(s)	1132, 1427, 1840
PsyI	GACNNNGTC	1 cut(s)	783
PvuII	CAGCTG	1 cut(s)	884
RsaI	GTAC	7 cut(s)	404, 504, 1069, 1102, 1639, 1643, 1826
RsaNI	GTAC	7 cut(s)	403, 503, 1068, 1101, 1638, 1642, 1825
SacI	GAGCTC	1 cut(s)	633
SalI	GTCGAC	1 cut(s)	1258
SaqAI	TTAA	4 cut(s)	590, 794, 1608, 1875
SatI	GCNGC	9 cut(s)	179, 369, 468, 554, 647, 1514, 1647, 1703, 1797
Sau3AI	GATC	5 cut(s)	70, 1132, 1192, 1427, 1840
Sau96I	GGNCC	5 cut(s)	380, 997, 1468, 1775, 1790
ScaI	AGTACT	1 cut(s)	404
SchI	GAGTC	3 cut(s)	350, 920, 935
ScrFI	CCNGG	7 cut(s)	605, 1410, 1419, 1599, 1773, 1788, 1920
SduI	GDGCHC	3 cut(s)	633, 1459, 1787
SfaNI	GCATC	7 cut(s)	403, 454, 820, 905, 1157, 1343, 1598
SfcI	CTRYAG	3 cut(s)	573, 834, 1797
SinI	GGWCC	3 cut(s)	997, 1775, 1790
SmlI	CTYRAG	4 cut(s)	516, 547, 634, 1874
SmoI	CTYRAG	4 cut(s)	516, 547, 634, 1874
SnaBI	TACGTA	1 cut(s)	1641
SseBI	AGGCCT	1 cut(s)	1696
SsiI	CCGC	8 cut(s)	50, 430, 553, 894, 1371, 1629, 1646, 1722
SspMI	CTAG	3 cut(s)	537, 1043, 1779
SstI	GAGCTC	1 cut(s)	633
StuI	AGGCCT	1 cut(s)	1696
StyD4I	CCNGG	7 cut(s)	603, 1408, 1417, 1597, 1771, 1786, 1918
StyI	CCWWGG	4 cut(s)	1451, 1583, 1778, 1924
TaaI	ACNGT	2 cut(s)	803, 1343
TaiI	ACGT	3 cut(s)	17, 992, 1643
TaqI	TCGA	4 cut(s)	105, 789, 1048, 1259
TaqII	GACCGA	1 cut(s)	684
TatI	WGTACW	1 cut(s)	402
TauI	GCSGC	2 cut(s)	556, 1649
TfiI	GAWTC	3 cut(s)	116, 608, 739
Tru1I	TTAA	4 cut(s)	590, 794, 1608, 1875
Tru9I	TTAA	4 cut(s)	590, 794, 1608, 1875
TscAI	CASTG	7 cut(s)	49, 140, 719, 1111, 1158, 1282, 1741
TseFI	GTSAC	3 cut(s)	638, 938, 1277
TseI	GCWGC	7 cut(s)	178, 368, 467, 646, 1513, 1702, 1796
Tsp45I	GTSAC	3 cut(s)	638, 938, 1277
TspDTI	ATGAA	9 cut(s)	113, 702, 731, 780, 1023, 1029, 1044, 1340, 1804
TspGWI	ACGGA	3 cut(s)	109, 1125, 1767
TspRI	CASTG	7 cut(s)	49, 140, 719, 1111, 1158, 1282, 1741
Tth111I	GACNNNGTC	1 cut(s)	783
Van91I	CCANNNNNTGG	2 cut(s)	1901, 1930
Vha464I	CTTAAG	1 cut(s)	1874
VpaK11BI	GGWCC	3 cut(s)	997, 1775, 1790
XagI	CCTNNNNNAGG	1 cut(s)	1797
XapI	RAATTY	3 cut(s)	496, 586, 1031
XceI	RCATGY	2 cut(s)	646, 1678
XcmI	CCANNNNNNNNNTGG	3 cut(s)	49, 1111, 1406
XmaJI	CCTAGG	1 cut(s)	1778
XmiI	GTMKAC	1 cut(s)	1259
XmnI	GAANNNNTTC	2 cut(s)	771, 1054
XspI	CTAG	3 cut(s)	537, 1043, 1779
ZrmI	AGTACT	1 cut(s)	404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.