Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0007838

Physical Location & Seq

Genomic Coordinates Forward (+)

9290643 .. 9295970

Gene Structure 5328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG112900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGCAGCGGTCTGGAGTAGAGTTTCCTAAGCATTCCTTAGATGCAGCTCCAATGTTTGCACCACCTGTTGCAAATTCAGTACCAAGACCTTCTCAAGCTGGATATGGAATGCCTAGCAATTCCTCAAGGCGGCTTGATGAGACAATGGCTACAGAAAACGAAAATTTAACTTTGACAAGCCTGGATTCTATGAGGGATGTTATGGAGCTCTTGAGTGACATGCTGCAAGCTGTGAACCCTAATGACCGATTGGGTGTAAAAGATGAAGTCATAGTTGAACTTGTCAACCAGTGTCGTGCCAACCAGAAAAAGCTGATTCATATGCTAACTACAACCGGAGATGAAGAACTTCTTGGACGGGGTCTCGAATTAAACGACAGTCTGCAAAGTTTGCTTGCAAAGCATGATGCTATAGCTTCTGGTTTACCTTTGCCAACTGCAAACTTTAGTCCTCAATCAGCTGAAATGCCCGCATCCAGTTCCAAGCATACTGAAGCAAAAGACTCCAGCATAAGTGACTCCAGTCCAAGACCTAAGGCCAGTCCCTCTGCACCAGTTGTTACCACGTCAAGGGTCCAAATTGATGAAGATGAAGAAGAGGAAGATGAATTTGCACAGCTAGCTCGAAGGCATTCCAAACAAAGTACCTCCAAGCCTACTGAAAGCACACCTAATGGTACCAGTGAAGGTTTGGCATTGGTAAGCGTAGATCCGTCTCAGTCTGCATCAGTGGCAACATCTGTCCCAAACAACGCGTTAGTTCTGTCTGATCCACCTGCTTCAAGTAAGACTACACAAGAGCAGAACATAATTGACCTACTGAGTATCACTTTGTCGACAACAGCAATCTCCAGTGACACCTCTCCTCCTCCTCCTCCTCCTCCAACATCTGTCCCTCCCCCACTTCCGGCATCTAACGGTAATGTTCATCAGATACCGGCTTCCCCCGCTATACAAGGCAATCCCTATCCTTCCCAAGCTTATCCTGGAAATCCTGGGCTTGGATCCTACAACAGCTATGTTGTTCCTTGGGCACAACCTCAGGCCCAACAACCTCAATTCAGGCCACAATTACAGCCACAGCAACAGCAGCTACCTCAATTCCAGTCGCAGTTTCAACCTCAATATCCCCAATACTCTTCTGCCTACCCTCCTCCACCATGGGCATCTTCTCCTGGTTATCCTAACAACCAAAATCATGTGTCCGCCAATAGTACGTATGCGGCTCCTCACACCAACACAACGGCTTACATGCCAGCGCAAGGAGCAAGGCCTTTGCAGCAGTATAATTCGTTCCCCGCGAGAGGAACCACTGGGTCAGATAACAACGGAGGTTTCCCAACAAATCCTGGTCCTAGGAGCCCTGGACCTGCTGCAGGACAAAAGCCCTTCATTCCCTCGTACAGATTATTTGAAGATCTGAATGTTTTTGGCAATGCTGATGGAAAGCTTAAGGTGGCGAACAGCAACCCATCATCTGGCTTCTCTGGAACTCCAGGCCAAGGTATGGTGGGTGGGAGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006886 GO:0007034 GO:0007088 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010564 GO:0010639 GO:0010948 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0023052 GO:0030163 GO:0030276 GO:0031410 GO:0031982 GO:0032182 GO:0032509 GO:0032511 GO:0033036 GO:0033043 GO:0033365 GO:0034613 GO:0042886 GO:0043130 GO:0043162 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043328 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0045786 GO:0045839 GO:0045930 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0065007 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0071985 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

508

Amino Acids

54.0

Weight (kDa)

5.26

Isoelectric Point (pI)

62.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAT	PF03127	67 - 141	6.2e-19	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38410
fragaria_vesca	FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390 FvH4_6g10390
malus_domestica	MD04G1169500.v1.1 MD12G1183500.v1.1
prunus_persica	Prupe.6G288000_v2.0.a1 Prupe.6G288000_v2.0.a1
pyrus_communis	pycom04g15020 pycom04g15030 pycom12g17210
rosa_chinensis	RchiOBHm_Chr3g0461281
rosa_laevigata	RLG00000024944
rosa_multiflora	Rmu_ssc0000326.1_g000008
rosa_roxburghii	Rroxscaffold_6G00418440 Rroxscaffold_6G00418730
rosa_rugosa	Rorug03G0049400
rosa_samantha	Rh3AG106700 Rh3BG110900 Rh3CG112800 Rh3DG112900
rosa_wichuraiana	Rw3G009140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	784
Acc36I	ACCTGC	2 cut(s)	784, 1378
Acc65I	GGTACC	1 cut(s)	677
AccB1I	GGYRCC	1 cut(s)	677
AccB7I	CCANNNNNTGG	2 cut(s)	1478, 1507
AccI	GTMKAC	1 cut(s)	836
AccII	CGCG	2 cut(s)	755, 1301
AciI	CCGC	7 cut(s)	7, 130, 471, 948, 1206, 1223, 1299
AclWI	GGATC	4 cut(s)	704, 764, 999, 1012
AcsI	RAATTY	3 cut(s)	73, 163, 608
AcuI	CTGAAG	1 cut(s)	513
AfaI	GTAC	5 cut(s)	81, 646, 679, 1216, 1403
AflII	CTTAAG	1 cut(s)	1451
AflIII	ACRYGT	1 cut(s)	753
AgsI	TTSAA	4 cut(s)	278, 783, 1118, 1415
AjiI	CACGTC	1 cut(s)	567
AjnI	CCWGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
AjuI	GAANNNNNNNTTGG	2 cut(s)	336, 368
Alw21I	GWGCWC	1 cut(s)	210
Alw26I	GTCTC	3 cut(s)	134, 368, 720
AlwI	GGATC	4 cut(s)	704, 764, 999, 1012
AoxI	GGCC	5 cut(s)	537, 1044, 1064, 1271, 1498
ApeKI	GCWGC	6 cut(s)	4, 44, 223, 1090, 1279, 1373
ApoI	RAATTY	3 cut(s)	73, 163, 608
Asp700I	GAANNNNTTC	2 cut(s)	348, 631
Asp718I	GGTACC	1 cut(s)	677
AspA2I	CCTAGG	1 cut(s)	1355
AspLEI	GCGC	1 cut(s)	1261
AspS9I	GGNCC	4 cut(s)	574, 1045, 1352, 1367
AsuNHI	GCTAGC	1 cut(s)	619
AvaII	GGWCC	3 cut(s)	574, 1352, 1367
AvrII	CCTAGG	1 cut(s)	1355
AxyI	CCTNAGG	2 cut(s)	534, 1041
BaeGI	GKGCMC	1 cut(s)	1036
BamHI	GGATCC	1 cut(s)	1004
BanI	GGYRCC	1 cut(s)	677
BanII	GRGCYC	2 cut(s)	210, 1364
Bbv12I	GWGCWC	1 cut(s)	210
BbvI	GCAGC	6 cut(s)	16, 56, 210, 1102, 1291, 1360
BccI	CCATC	2 cut(s)	1436, 1480
BceAI	ACGGC	1 cut(s)	1260
BciT130I	CCWGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
BcoDI	GTCTC	3 cut(s)	134, 368, 720
BfaI	CTAG	3 cut(s)	114, 620, 1356
BfmI	CTRYAG	3 cut(s)	150, 411, 1374
BfrI	CTTAAG	1 cut(s)	1451
BfuAI	ACCTGC	2 cut(s)	784, 1378
BglII	AGATCT	1 cut(s)	1417
BisI	GCNGC	8 cut(s)	5, 45, 131, 224, 1091, 1224, 1280, 1374
BlnI	CCTAGG	1 cut(s)	1355
BlsI	GCNGC	8 cut(s)	6, 46, 132, 225, 1092, 1225, 1281, 1375
Bme1390I	CCNGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
Bme18I	GGWCC	3 cut(s)	574, 1352, 1367
BmgBI	CACGTC	1 cut(s)	567
BmgT120I	GGNCC	4 cut(s)	574, 1045, 1352, 1367
BmiI	GGNNCC	6 cut(s)	575, 679, 1006, 1227, 1309, 1361
BmrFI	CCNGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
BmrI	ACTGGG	1 cut(s)	1323
BmsI	GCATC	6 cut(s)	31, 397, 482, 734, 920, 1175
BmtI	GCTAGC	1 cut(s)	623
BmuI	ACTGGG	1 cut(s)	1323
BoxI	GACNNNNGTC	1 cut(s)	522
BpmI	CTGGAG	5 cut(s)	33, 490, 505, 835, 1479
Bpu10I	CCTNAGC	1 cut(s)	27
BpuEI	CTTGAG	3 cut(s)	78, 109, 232
BsaAI	YACGTR	1 cut(s)	1218
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	6 cut(s)	995, 1028, 1160, 1355, 1363, 1501
BsaWI	WCCGGW	1 cut(s)	335
BsaXI	ACNNNNNCTCC	2 cut(s)	850, 880
Bse118I	RCCGGY	1 cut(s)	937
Bse1I	ACTGG	9 cut(s)	289, 477, 522, 540, 554, 681, 852, 1105, 1318
Bse21I	CCTNAGG	2 cut(s)	534, 1041
Bse3DI	GCAATG	1 cut(s)	1441
BseBI	CCWGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
BseDI	CCNNGG	6 cut(s)	995, 1028, 1160, 1355, 1363, 1501
BseGI	GGATG	2 cut(s)	202, 473
BseMI	GCAATG	1 cut(s)	1441
BseMII	CTCAG	3 cut(s)	731, 812, 1055
BseNI	ACTGG	9 cut(s)	289, 477, 522, 540, 554, 681, 852, 1105, 1318
BseRI	GAGGAG	8 cut(s)	855, 858, 861, 864, 867, 870, 1143, 1218
BseSI	GKGCMC	1 cut(s)	1036
BseXI	GCAGC	6 cut(s)	16, 56, 210, 1102, 1291, 1360
BsgI	GTGCAG	1 cut(s)	534
Bsh1236I	CGCG	2 cut(s)	755, 1301
BshFI	GGCC	5 cut(s)	539, 1046, 1066, 1273, 1500
BshNI	GGYRCC	1 cut(s)	677
BsiHKAI	GWGCWC	1 cut(s)	210
BsiSI	CCGG	3 cut(s)	336, 908, 938
BslFI	GGGAC	3 cut(s)	528, 728, 878
BsmAI	GTCTC	3 cut(s)	134, 368, 720
BsmBI	CGTCTC	1 cut(s)	720
BsmFI	GGGAC	3 cut(s)	528, 728, 878
BsmI	GAATGC	3 cut(s)	31, 114, 631
BsnI	GGCC	5 cut(s)	539, 1046, 1066, 1273, 1500
Bso31I	GGTCTC	1 cut(s)	368
Bsp1286I	GDGCHC	3 cut(s)	210, 1036, 1364
Bsp143I	GATC	4 cut(s)	709, 769, 1004, 1417
Bsp19I	CCATGG	1 cut(s)	1160
BspACI	CCGC	7 cut(s)	7, 130, 471, 948, 1206, 1223, 1299
BspANI	GGCC	5 cut(s)	539, 1046, 1066, 1273, 1500
BspCNI	CTCAG	3 cut(s)	730, 813, 1054
BspFNI	CGCG	2 cut(s)	755, 1301
BspLI	GGNNCC	6 cut(s)	575, 679, 1006, 1227, 1309, 1361
BspMAI	CTGCAG	1 cut(s)	1378
BspMI	ACCTGC	2 cut(s)	784, 1378
BspOI	GCTAGC	1 cut(s)	623
BspPI	GGATC	4 cut(s)	704, 764, 999, 1012
BspT107I	GGYRCC	1 cut(s)	677
BspTI	CTTAAG	1 cut(s)	1451
BspTNI	GGTCTC	1 cut(s)	368
BsrDI	GCAATG	1 cut(s)	1441
BsrFI	RCCGGY	1 cut(s)	937
BsrI	ACTGG	9 cut(s)	289, 477, 522, 540, 554, 681, 852, 1105, 1318
BssAI	RCCGGY	1 cut(s)	937
BssECI	CCNNGG	6 cut(s)	995, 1028, 1160, 1355, 1363, 1501
BssMI	GATC	4 cut(s)	709, 769, 1004, 1417
BssT1I	CCWWGG	4 cut(s)	1028, 1160, 1355, 1501
Bst2UI	CCWGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
Bst4CI	ACNGT	2 cut(s)	380, 920
Bst6I	CTCTTC	2 cut(s)	591, 1144
BstAFI	CTTAAG	1 cut(s)	1451
BstAPI	GCANNNNNTGC	1 cut(s)	391
BstBAI	YACGTR	1 cut(s)	1218
BstC8I	GCNNGC	5 cut(s)	228, 396, 471, 621, 1257
BstDEI	CTNAG	6 cut(s)	27, 37, 534, 717, 821, 1041
BstDSI	CCRYGG	1 cut(s)	1160
BstENI	CCTNNNNNAGG	1 cut(s)	1374
BstF5I	GGATG	2 cut(s)	202, 473
BstFNI	CGCG	2 cut(s)	755, 1301
BstHHI	GCGC	1 cut(s)	1261
BstKTI	GATC	4 cut(s)	712, 772, 1007, 1420
BstMAI	GTCTC	3 cut(s)	134, 368, 720
BstMBI	GATC	4 cut(s)	709, 769, 1004, 1417
BstMWI	GCNNNNNNNGC	8 cut(s)	391, 400, 620, 731, 947, 1090, 1265, 1279
BstNI	CCWGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
BstNSI	RCATGY	2 cut(s)	223, 1255
BstPAI	GACNNNNGTC	1 cut(s)	522
BstSCI	CCNGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
BstSFI	CTRYAG	3 cut(s)	150, 411, 1374
BstSLI	GKGCMC	1 cut(s)	1036
BstSNI	TACGTA	1 cut(s)	1218
BstUI	CGCG	2 cut(s)	755, 1301
BstV1I	GCAGC	6 cut(s)	16, 56, 210, 1102, 1291, 1360
BstX2I	RGATCY	3 cut(s)	709, 1004, 1417
BstYI	RGATCY	3 cut(s)	709, 1004, 1417
Bsu36I	CCTNAGG	2 cut(s)	534, 1041
BsuRI	GGCC	5 cut(s)	539, 1046, 1066, 1273, 1500
BtgI	CCRYGG	1 cut(s)	1160
BtrI	CACGTC	1 cut(s)	567
BtsCI	GGATG	2 cut(s)	202, 473
BtsIMutI	CAGTG	5 cut(s)	296, 688, 735, 859, 1311
BveI	ACCTGC	2 cut(s)	784, 1378
Cac8I	GCNNGC	5 cut(s)	228, 396, 471, 621, 1257
CfoI	GCGC	1 cut(s)	1261
Cfr10I	RCCGGY	1 cut(s)	937
Cfr13I	GGNCC	4 cut(s)	574, 1045, 1352, 1367
Csp6I	GTAC	5 cut(s)	80, 645, 678, 1215, 1402
CviAII	CATG	5 cut(s)	220, 404, 1161, 1199, 1252
CviQI	GTAC	5 cut(s)	80, 645, 678, 1215, 1402
DdeI	CTNAG	6 cut(s)	27, 37, 534, 717, 821, 1041
DpnI	GATC	4 cut(s)	711, 771, 1006, 1419
DpnII	GATC	4 cut(s)	709, 769, 1004, 1417
Eam1104I	CTCTTC	2 cut(s)	591, 1144
EarI	CTCTTC	2 cut(s)	591, 1144
EciI	GGCGGA	1 cut(s)	1195
Ecl136II	GAGCTC	1 cut(s)	208
Eco105I	TACGTA	1 cut(s)	1218
Eco130I	CCWWGG	4 cut(s)	1028, 1160, 1355, 1501
Eco147I	AGGCCT	1 cut(s)	1273
Eco24I	GRGCYC	2 cut(s)	210, 1364
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	3 cut(s)	574, 1352, 1367
Eco53kI	GAGCTC	1 cut(s)	208
Eco57I	CTGAAG	1 cut(s)	513
Eco81I	CCTNAGG	2 cut(s)	534, 1041
EcoICRI	GAGCTC	1 cut(s)	208
EcoNI	CCTNNNNNAGG	1 cut(s)	1374
EcoRII	CCWGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
EcoT14I	CCWWGG	4 cut(s)	1028, 1160, 1355, 1501
EcoT38I	GRGCYC	2 cut(s)	210, 1364
ErhI	CCWWGG	4 cut(s)	1028, 1160, 1355, 1501
Esp3I	CGTCTC	1 cut(s)	720
FaeI	CATG	5 cut(s)	223, 407, 1164, 1202, 1255
FalI	AAGNNNNNCTT	4 cut(s)	20, 52, 336, 368
FaqI	GGGAC	3 cut(s)	528, 728, 878
FatI	CATG	5 cut(s)	219, 403, 1160, 1198, 1251
FauI	CCCGC	3 cut(s)	478, 955, 1306
FauNDI	CATATG	1 cut(s)	321
FblI	GTMKAC	1 cut(s)	836
Fnu4HI	GCNGC	8 cut(s)	5, 45, 131, 224, 1091, 1224, 1280, 1374
FokI	GGATG	2 cut(s)	209, 460
FriOI	GRGCYC	2 cut(s)	210, 1364
Fsp4HI	GCNGC	8 cut(s)	5, 45, 131, 224, 1091, 1224, 1280, 1374
FspBI	CTAG	3 cut(s)	114, 620, 1356
GlaI	GCGC	1 cut(s)	1260
GluI	GCNGC	8 cut(s)	5, 45, 131, 224, 1091, 1224, 1280, 1374
GsuI	CTGGAG	5 cut(s)	33, 490, 505, 835, 1479
HaeIII	GGCC	5 cut(s)	539, 1046, 1066, 1273, 1500
HapII	CCGG	3 cut(s)	336, 908, 938
HhaI	GCGC	1 cut(s)	1261
Hin1II	CATG	5 cut(s)	223, 407, 1164, 1202, 1255
Hin6I	GCGC	1 cut(s)	1259
HinP1I	GCGC	1 cut(s)	1259
HincII	GTYRAC	2 cut(s)	286, 837
HindII	GTYRAC	2 cut(s)	286, 837
HindIII	AAGCTT	2 cut(s)	978, 1448
HinfI	GANTC	4 cut(s)	185, 316, 503, 518
HpaII	CCGG	3 cut(s)	336, 908, 938
Hpy166II	GTNNAC	4 cut(s)	235, 286, 425, 837
Hpy188I	TCNGA	4 cut(s)	769, 933, 1321, 1422
Hpy188III	TCNNGA	4 cut(s)	12, 211, 365, 1488
Hpy8I	GTNNAC	4 cut(s)	235, 286, 425, 837
HpyAV	CCTTC	5 cut(s)	99, 621, 680, 981, 1399
HpyCH4III	ACNGT	2 cut(s)	380, 920
HpyCH4IV	ACGT	2 cut(s)	566, 1217
HpyF10VI	GCNNNNNNNGC	8 cut(s)	391, 400, 620, 731, 947, 1090, 1265, 1279
HpyF3I	CTNAG	6 cut(s)	27, 37, 534, 717, 821, 1041
HpySE526I	ACGT	2 cut(s)	566, 1217
Hsp92II	CATG	5 cut(s)	223, 407, 1164, 1202, 1255
HspAI	GCGC	1 cut(s)	1259
KpnI	GGTACC	1 cut(s)	681
Kzo9I	GATC	4 cut(s)	709, 769, 1004, 1417
LmnI	GCTCC	5 cut(s)	52, 205, 1231, 1265, 1359
Lsp1109I	GCAGC	6 cut(s)	16, 56, 210, 1102, 1291, 1360
LweI	GCATC	6 cut(s)	31, 397, 482, 734, 920, 1175
MaeI	CTAG	3 cut(s)	114, 620, 1356
MaeII	ACGT	2 cut(s)	566, 1217
MaeIII	GTNAC	4 cut(s)	215, 515, 559, 854
MalI	GATC	4 cut(s)	711, 771, 1006, 1419
MboI	GATC	4 cut(s)	709, 769, 1004, 1417
MboII	GAAGA	8 cut(s)	356, 599, 605, 608, 614, 1131, 1161, 1427
MflI	RGATCY	3 cut(s)	709, 1004, 1417
MhlI	GDGCHC	3 cut(s)	210, 1036, 1364
MluI	ACGCGT	1 cut(s)	753
MlyI	GAGTC	2 cut(s)	497, 512
MmeI	TCCRAC	1 cut(s)	908
MroXI	GAANNNNTTC	2 cut(s)	348, 631
MseI	TTAA	3 cut(s)	167, 371, 1452
MspA1I	CMGCKG	2 cut(s)	7, 461
MspCI	CTTAAG	1 cut(s)	1451
MspI	CCGG	3 cut(s)	336, 908, 938
MspR9I	CCNGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
Mva1269I	GAATGC	3 cut(s)	31, 114, 631
MvaI	CCWGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
MvnI	CGCG	2 cut(s)	755, 1301
MwoI	GCNNNNNNNGC	8 cut(s)	391, 400, 620, 731, 947, 1090, 1265, 1279
NcoI	CCATGG	1 cut(s)	1160
NdeI	CATATG	1 cut(s)	321
NdeII	GATC	4 cut(s)	709, 769, 1004, 1417
NheI	GCTAGC	1 cut(s)	619
NlaIII	CATG	5 cut(s)	223, 407, 1164, 1202, 1255
NlaIV	GGNNCC	6 cut(s)	575, 679, 1006, 1227, 1309, 1361
NmuCI	GTSAC	3 cut(s)	215, 515, 854
NspI	RCATGY	2 cut(s)	223, 1255
PaqCI	CACCTGC	1 cut(s)	784
PceI	AGGCCT	1 cut(s)	1273
PcsI	WCGNNNNNNNCGW	2 cut(s)	372, 1298
PctI	GAATGC	3 cut(s)	31, 114, 631
PdmI	GAANNNNTTC	2 cut(s)	348, 631
PfeI	GAWTC	2 cut(s)	185, 316
PflFI	GACNNNGTC	1 cut(s)	360
PflMI	CCANNNNNTGG	2 cut(s)	1478, 1507
PfoI	TCCNGGA	1 cut(s)	985
PkrI	GCNGC	8 cut(s)	6, 46, 132, 225, 1092, 1225, 1281, 1375
PleI	GAGTC	2 cut(s)	497, 512
PpsI	GAGTC	2 cut(s)	497, 512
Ppu21I	YACGTR	1 cut(s)	1218
PshAI	GACNNNNGTC	1 cut(s)	522
Psp124BI	GAGCTC	1 cut(s)	210
Psp6I	CCWGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
PspGI	CCWGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
PspN4I	GGNNCC	6 cut(s)	575, 679, 1006, 1227, 1309, 1361
PspPI	GGNCC	4 cut(s)	574, 1045, 1352, 1367
PsrI	GAACNNNNNNTAC	2 cut(s)	1277, 1309
PstI	CTGCAG	1 cut(s)	1378
PsuI	RGATCY	3 cut(s)	709, 1004, 1417
PsyI	GACNNNGTC	1 cut(s)	360
PvuII	CAGCTG	1 cut(s)	461
RsaI	GTAC	5 cut(s)	81, 646, 679, 1216, 1403
RsaNI	GTAC	5 cut(s)	80, 645, 678, 1215, 1402
SacI	GAGCTC	1 cut(s)	210
SalI	GTCGAC	1 cut(s)	835
SaqAI	TTAA	3 cut(s)	167, 371, 1452
SatI	GCNGC	8 cut(s)	5, 45, 131, 224, 1091, 1224, 1280, 1374
Sau3AI	GATC	4 cut(s)	709, 769, 1004, 1417
Sau96I	GGNCC	4 cut(s)	574, 1045, 1352, 1367
SchI	GAGTC	2 cut(s)	497, 512
ScrFI	CCNGG	7 cut(s)	182, 987, 996, 1176, 1350, 1365, 1497
SduI	GDGCHC	3 cut(s)	210, 1036, 1364
SfaNI	GCATC	6 cut(s)	31, 397, 482, 734, 920, 1175
SfcI	CTRYAG	3 cut(s)	150, 411, 1374
SinI	GGWCC	3 cut(s)	574, 1352, 1367
SmlI	CTYRAG	4 cut(s)	93, 124, 211, 1451
SmoI	CTYRAG	4 cut(s)	93, 124, 211, 1451
SnaBI	TACGTA	1 cut(s)	1218
SseBI	AGGCCT	1 cut(s)	1273
SsiI	CCGC	7 cut(s)	7, 130, 471, 948, 1206, 1223, 1299
SspMI	CTAG	3 cut(s)	114, 620, 1356
SstI	GAGCTC	1 cut(s)	210
StuI	AGGCCT	1 cut(s)	1273
StyD4I	CCNGG	7 cut(s)	180, 985, 994, 1174, 1348, 1363, 1495
StyI	CCWWGG	4 cut(s)	1028, 1160, 1355, 1501
TaaI	ACNGT	2 cut(s)	380, 920
TaiI	ACGT	2 cut(s)	569, 1220
TaqI	TCGA	3 cut(s)	366, 625, 836
TaqII	GACCGA	1 cut(s)	261
TauI	GCSGC	2 cut(s)	133, 1226
TfiI	GAWTC	2 cut(s)	185, 316
Tru1I	TTAA	3 cut(s)	167, 371, 1452
Tru9I	TTAA	3 cut(s)	167, 371, 1452
TscAI	CASTG	5 cut(s)	296, 688, 735, 859, 1318
TseFI	GTSAC	3 cut(s)	215, 515, 854
TseI	GCWGC	6 cut(s)	4, 44, 223, 1090, 1279, 1373
Tsp45I	GTSAC	3 cut(s)	215, 515, 854
TspDTI	ATGAA	8 cut(s)	279, 308, 357, 600, 606, 621, 917, 1381
TspGWI	ACGGA	2 cut(s)	702, 1344
TspRI	CASTG	5 cut(s)	296, 688, 735, 859, 1318
Tth111I	GACNNNGTC	1 cut(s)	360
Van91I	CCANNNNNTGG	2 cut(s)	1478, 1507
Vha464I	CTTAAG	1 cut(s)	1451
VpaK11BI	GGWCC	3 cut(s)	574, 1352, 1367
XagI	CCTNNNNNAGG	1 cut(s)	1374
XapI	RAATTY	3 cut(s)	73, 163, 608
XceI	RCATGY	2 cut(s)	223, 1255
XcmI	CCANNNNNNNNNTGG	2 cut(s)	688, 983
XmaJI	CCTAGG	1 cut(s)	1355
XmiI	GTMKAC	1 cut(s)	836
XmnI	GAANNNNTTC	2 cut(s)	348, 631
XspI	CTAG	3 cut(s)	114, 620, 1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.