Domain of unknown function (DUF4378)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02390 AT5G02390 AT5G02390 |
| fragaria_vesca | FvH4_6g13720 |
| malus_domestica | MD04G1128800.v1.1 MD12G1141400.v1.1 |
| prunus_persica | Prupe.6G254700_v2.0.a1 |
| pyrus_communis | pycom04g11700 pycom12g13630 |
| rosa_chinensis | RchiOBHm_Chr3g0466591 |
| rosa_laevigata | RLG00000024561 |
| rosa_multiflora | Rmu_sc0020778.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00414320 |
| rosa_rugosa | Rorug03G0083000.1 Rorug03G0083100 |
| rosa_samantha | Rh3AG129900 Rh3BG151300 Rh3CG151000 Rh3DG151900 |
| rosa_wichuraiana | Rw3G012280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2540 |
| Acc36I | ACCTGC | 1 cut(s) | 2682 |
| Acc65I | GGTACC | 1 cut(s) | 1419 |
| AccB1I | GGYRCC | 2 cut(s) | 1419, 1852 |
| AccI | GTMKAC | 3 cut(s) | 141, 229, 1189 |
| AccII | CGCG | 1 cut(s) | 322 |
| AccIII | TCCGGA | 1 cut(s) | 1536 |
| AciI | CCGC | 3 cut(s) | 16, 1965, 2109 |
| AclWI | GGATC | 7 cut(s) | 615, 806, 819, 1146, 1949, 2291, 2345 |
| AcoI | YGGCCR | 1 cut(s) | 1031 |
| AcsI | RAATTY | 4 cut(s) | 801, 1563, 1645, 1865 |
| AcuI | CTGAAG | 5 cut(s) | 291, 363, 1728, 2046, 2540 |
| AcyI | GRCGYC | 1 cut(s) | 2509 |
| AfaI | GTAC | 6 cut(s) | 678, 1038, 1421, 1592, 1942, 2549 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 56, 745, 902, 1060, 1282 |
| AflIII | ACRYGT | 1 cut(s) | 706 |
| AhlI | ACTAGT | 1 cut(s) | 1442 |
| AjiI | CACGTC | 1 cut(s) | 1080 |
| AjnI | CCWGG | 3 cut(s) | 49, 615, 901 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2222, 2254 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2499, 2531 |
| Alw21I | GWGCWC | 1 cut(s) | 1529 |
| Alw26I | GTCTC | 3 cut(s) | 1086, 1430, 2554 |
| AlwI | GGATC | 7 cut(s) | 615, 806, 819, 1146, 1949, 2291, 2345 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1721 |
| Aor13HI | TCCGGA | 1 cut(s) | 1536 |
| AoxI | GGCC | 3 cut(s) | 736, 1031, 1458 |
| ApeKI | GCWGC | 5 cut(s) | 13, 173, 176, 1880, 2337 |
| ApoI | RAATTY | 4 cut(s) | 801, 1563, 1645, 1865 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2456, 2488, 2663, 2695 |
| Asp718I | GGTACC | 1 cut(s) | 1419 |
| AspLEI | GCGC | 2 cut(s) | 322, 863 |
| AspS9I | GGNCC | 5 cut(s) | 736, 1285, 2060, 2532, 2671 |
| AsuC2I | CCSGG | 1 cut(s) | 816 |
| AsuHPI | GGTGA | 6 cut(s) | 101, 1118, 1506, 1521, 1953, 2393 |
| AsuII | TTCGAA | 1 cut(s) | 1280 |
| AvaII | GGWCC | 4 cut(s) | 1285, 2060, 2532, 2671 |
| BamHI | GGATCC | 1 cut(s) | 811 |
| BanI | GGYRCC | 2 cut(s) | 1419, 1852 |
| BanII | GRGCYC | 1 cut(s) | 1529 |
| BauI | CACGAG | 1 cut(s) | 2051 |
| BbsI | GAAGAC | 1 cut(s) | 2466 |
| Bbv12I | GWGCWC | 1 cut(s) | 1529 |
| BbvI | GCAGC | 4 cut(s) | 163, 185, 1892, 2324 |
| BccI | CCATC | 6 cut(s) | 244, 747, 1048, 1610, 2422, 2612 |
| BceAI | ACGGC | 2 cut(s) | 1046, 2496 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 714, 748 |
| BciT130I | CCWGG | 3 cut(s) | 51, 617, 903 |
| BciVI | GTATCC | 1 cut(s) | 2128 |
| BclI | TGATCA | 6 cut(s) | 1164, 1339, 1918, 2389, 2412, 2572 |
| BcnI | CCSGG | 1 cut(s) | 816 |
| BcoDI | GTCTC | 3 cut(s) | 1086, 1430, 2554 |
| BcuI | ACTAGT | 1 cut(s) | 1442 |
| BfmI | CTRYAG | 2 cut(s) | 39, 177 |
| BfuAI | ACCTGC | 1 cut(s) | 2682 |
| BfuI | GTATCC | 1 cut(s) | 2128 |
| BglII | AGATCT | 1 cut(s) | 1735 |
| BisI | GCNGC | 5 cut(s) | 14, 174, 177, 1881, 2338 |
| BlsI | GCNGC | 5 cut(s) | 15, 175, 178, 1882, 2339 |
| Bme1390I | CCNGG | 4 cut(s) | 51, 617, 816, 903 |
| Bme18I | GGWCC | 4 cut(s) | 1285, 2060, 2532, 2671 |
| BmgBI | CACGTC | 1 cut(s) | 1080 |
| BmgT120I | GGNCC | 5 cut(s) | 736, 1285, 2060, 2532, 2671 |
| BmiI | GGNNCC | 7 cut(s) | 813, 930, 1287, 1421, 1854, 2094, 2534 |
| BmrFI | CCNGG | 4 cut(s) | 51, 617, 816, 903 |
| BmrI | ACTGGG | 1 cut(s) | 2014 |
| BmsI | GCATC | 7 cut(s) | 199, 232, 712, 1198, 1393, 1415, 1765 |
| BmuI | ACTGGG | 1 cut(s) | 2014 |
| BpiI | GAAGAC | 1 cut(s) | 2466 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1496, 1528 |
| BpmI | CTGGAG | 1 cut(s) | 1596 |
| Bpu14I | TTCGAA | 1 cut(s) | 1280 |
| BpuEI | CTTGAG | 2 cut(s) | 2572, 2578 |
| BpuMI | CCSGG | 1 cut(s) | 816 |
| Bsa29I | ATCGAT | 1 cut(s) | 419 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1917, 2295 |
| BsaHI | GRCGYC | 1 cut(s) | 2509 |
| BsaI | GGTCTC | 1 cut(s) | 2554 |
| BsaJI | CCNNGG | 3 cut(s) | 879, 1203, 2272 |
| BsaWI | WCCGGW | 4 cut(s) | 372, 1114, 1536, 2563 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 56, 745, 902, 1060, 1282 |
| Bse1I | ACTGG | 9 cut(s) | 119, 389, 946, 1034, 1881, 1938, 1944, 2020, 2303 |
| Bse3DI | GCAATG | 3 cut(s) | 40, 582, 1292 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1917, 2295 |
| BseAI | TCCGGA | 1 cut(s) | 1536 |
| BseBI | CCWGG | 3 cut(s) | 51, 617, 903 |
| BseCI | ATCGAT | 1 cut(s) | 419 |
| BseDI | CCNNGG | 3 cut(s) | 879, 1203, 2272 |
| BseGI | GGATG | 6 cut(s) | 1084, 1213, 1777, 1840, 2487, 2631 |
| BseJI | GATNNNNATC | 2 cut(s) | 1917, 2295 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 56, 745, 902, 1060, 1282 |
| BseMI | GCAATG | 3 cut(s) | 40, 582, 1292 |
| BseMII | CTCAG | 4 cut(s) | 1060, 1470, 1713, 2130 |
| BseNI | ACTGG | 9 cut(s) | 119, 389, 946, 1034, 1881, 1938, 1944, 2020, 2303 |
| BseRI | GAGGAG | 2 cut(s) | 813, 1076 |
| BseXI | GCAGC | 4 cut(s) | 163, 185, 1892, 2324 |
| BsgI | GTGCAG | 3 cut(s) | 192, 582, 1850 |
| Bsh1236I | CGCG | 1 cut(s) | 322 |
| BshFI | GGCC | 3 cut(s) | 738, 1033, 1460 |
| BshNI | GGYRCC | 2 cut(s) | 1419, 1852 |
| BshVI | ATCGAT | 1 cut(s) | 419 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1529 |
| BsiSI | CCGG | 5 cut(s) | 373, 815, 1115, 1537, 2564 |
| BslFI | GGGAC | 3 cut(s) | 1529, 1958, 2290 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 56, 745, 902, 1060, 1282 |
| BsmAI | GTCTC | 3 cut(s) | 1086, 1430, 2554 |
| BsmBI | CGTCTC | 2 cut(s) | 1086, 1430 |
| BsmFI | GGGAC | 3 cut(s) | 1529, 1958, 2290 |
| BsnI | GGCC | 3 cut(s) | 738, 1033, 1460 |
| Bso31I | GGTCTC | 1 cut(s) | 2554 |
| Bsp119I | TTCGAA | 1 cut(s) | 1280 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1529 |
| Bsp13I | TCCGGA | 1 cut(s) | 1536 |
| Bsp19I | CCATGG | 1 cut(s) | 1203 |
| BspACI | CCGC | 3 cut(s) | 16, 1965, 2109 |
| BspANI | GGCC | 3 cut(s) | 738, 1033, 1460 |
| BspCNI | CTCAG | 4 cut(s) | 1059, 1471, 1714, 2131 |
| BspDI | ATCGAT | 1 cut(s) | 419 |
| BspEI | TCCGGA | 1 cut(s) | 1536 |
| BspFNI | CGCG | 1 cut(s) | 322 |
| BspHI | TCATGA | 1 cut(s) | 99 |
| BspLI | GGNNCC | 7 cut(s) | 813, 930, 1287, 1421, 1854, 2094, 2534 |
| BspMAI | CTGCAG | 1 cut(s) | 181 |
| BspMI | ACCTGC | 1 cut(s) | 2682 |
| BspPI | GGATC | 7 cut(s) | 615, 806, 819, 1146, 1949, 2291, 2345 |
| BspQI | GCTCTTC | 1 cut(s) | 1995 |
| BspT104I | TTCGAA | 1 cut(s) | 1280 |
| BspT107I | GGYRCC | 2 cut(s) | 1419, 1852 |
| BspTNI | GGTCTC | 1 cut(s) | 2554 |
| BsrDI | GCAATG | 3 cut(s) | 40, 582, 1292 |
| BsrI | ACTGG | 9 cut(s) | 119, 389, 946, 1034, 1881, 1938, 1944, 2020, 2303 |
| BssECI | CCNNGG | 3 cut(s) | 879, 1203, 2272 |
| BssNAI | GTATAC | 1 cut(s) | 230 |
| BssNI | GRCGYC | 1 cut(s) | 2509 |
| BssSI | CACGAG | 1 cut(s) | 2051 |
| BssT1I | CCWWGG | 3 cut(s) | 879, 1203, 2272 |
| Bst1107I | GTATAC | 1 cut(s) | 230 |
| Bst2BI | CACGAG | 1 cut(s) | 2051 |
| Bst2UI | CCWGG | 3 cut(s) | 51, 617, 903 |
| Bst4CI | ACNGT | 5 cut(s) | 496, 604, 1424, 1892, 2459 |
| Bst6I | CTCTTC | 2 cut(s) | 1497, 1995 |
| BstACI | GRCGYC | 1 cut(s) | 2509 |
| BstBI | TTCGAA | 1 cut(s) | 1280 |
| BstC8I | GCNNGC | 5 cut(s) | 89, 382, 1666, 2286, 2502 |
| BstDEI | CTNAG | 9 cut(s) | 246, 354, 1046, 1142, 1368, 1479, 1722, 1848, 2139 |
| BstDSI | CCRYGG | 1 cut(s) | 1203 |
| BstF5I | GGATG | 6 cut(s) | 1084, 1213, 1777, 1840, 2487, 2631 |
| BstFNI | CGCG | 1 cut(s) | 322 |
| BstHHI | GCGC | 2 cut(s) | 322, 863 |
| BstMAI | GTCTC | 3 cut(s) | 1086, 1430, 2554 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 860, 1674 |
| BstNI | CCWGG | 3 cut(s) | 51, 617, 903 |
| BstNSI | RCATGY | 5 cut(s) | 91, 216, 710, 1163, 2288 |
| BstSCI | CCNGG | 4 cut(s) | 49, 615, 814, 901 |
| BstSFI | CTRYAG | 2 cut(s) | 39, 177 |
| BstUI | CGCG | 1 cut(s) | 322 |
| BstV1I | GCAGC | 4 cut(s) | 163, 185, 1892, 2324 |
| BstV2I | GAAGAC | 1 cut(s) | 2466 |
| BstX2I | RGATCY | 4 cut(s) | 811, 1138, 1735, 1954 |
| BstYI | RGATCY | 4 cut(s) | 811, 1138, 1735, 1954 |
| BstZ17I | GTATAC | 1 cut(s) | 230 |
| Bsu15I | ATCGAT | 1 cut(s) | 419 |
| BsuI | GTATCC | 1 cut(s) | 2128 |
| BsuRI | GGCC | 3 cut(s) | 738, 1033, 1460 |
| BsuTUI | ATCGAT | 1 cut(s) | 419 |
| BtgI | CCRYGG | 1 cut(s) | 1203 |
| BtgZI | GCGATG | 1 cut(s) | 1026 |
| BtrI | CACGTC | 1 cut(s) | 1080 |
| BtsCI | GGATG | 6 cut(s) | 1084, 1213, 1777, 1840, 2487, 2631 |
| BtsI | GCAGTG | 2 cut(s) | 577, 2131 |
| BtsIMutI | CAGTG | 7 cut(s) | 112, 577, 609, 1054, 1897, 1951, 2131 |
| BveI | ACCTGC | 1 cut(s) | 2682 |
| Cac8I | GCNNGC | 5 cut(s) | 89, 382, 1666, 2286, 2502 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1721 |
| CciI | TCATGA | 1 cut(s) | 99 |
| CfoI | GCGC | 2 cut(s) | 322, 863 |
| Cfr13I | GGNCC | 5 cut(s) | 736, 1285, 2060, 2532, 2671 |
| ClaI | ATCGAT | 1 cut(s) | 419 |
| CseI | GACGC | 1 cut(s) | 2517 |
| Csp6I | GTAC | 6 cut(s) | 677, 1037, 1420, 1591, 1941, 2548 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 133, 168 |
| CviQI | GTAC | 6 cut(s) | 677, 1037, 1420, 1591, 1941, 2548 |
| DdeI | CTNAG | 9 cut(s) | 246, 354, 1046, 1142, 1368, 1479, 1722, 1848, 2139 |
| DraI | TTTAAA | 1 cut(s) | 1642 |
| EaeI | YGGCCR | 1 cut(s) | 1031 |
| Eam1104I | CTCTTC | 2 cut(s) | 1497, 1995 |
| EarI | CTCTTC | 2 cut(s) | 1497, 1995 |
| Ecl136II | GAGCTC | 1 cut(s) | 1527 |
| Eco130I | CCWWGG | 3 cut(s) | 879, 1203, 2272 |
| Eco24I | GRGCYC | 1 cut(s) | 1529 |
| Eco31I | GGTCTC | 1 cut(s) | 2554 |
| Eco47I | GGWCC | 4 cut(s) | 1285, 2060, 2532, 2671 |
| Eco53kI | GAGCTC | 1 cut(s) | 1527 |
| Eco57I | CTGAAG | 5 cut(s) | 291, 363, 1728, 2046, 2540 |
| EcoICRI | GAGCTC | 1 cut(s) | 1527 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1285, 2671 |
| EcoRII | CCWGG | 3 cut(s) | 49, 615, 901 |
| EcoT14I | CCWWGG | 3 cut(s) | 879, 1203, 2272 |
| EcoT22I | ATGCAT | 2 cut(s) | 214, 1408 |
| EcoT38I | GRGCYC | 1 cut(s) | 1529 |
| ErhI | CCWWGG | 3 cut(s) | 879, 1203, 2272 |
| Esp3I | CGTCTC | 2 cut(s) | 1086, 1430 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 645, 677, 777, 809 |
| FaqI | GGGAC | 3 cut(s) | 1529, 1958, 2290 |
| FauI | CCCGC | 2 cut(s) | 9, 1972 |
| FbaI | TGATCA | 6 cut(s) | 1164, 1339, 1918, 2389, 2412, 2572 |
| FblI | GTMKAC | 3 cut(s) | 141, 229, 1189 |
| Fnu4HI | GCNGC | 5 cut(s) | 14, 174, 177, 1881, 2338 |
| FokI | GGATG | 6 cut(s) | 1071, 1220, 1784, 1847, 2474, 2638 |
| FriOI | GRGCYC | 1 cut(s) | 1529 |
| Fsp4HI | GCNGC | 5 cut(s) | 14, 174, 177, 1881, 2338 |
| GlaI | GCGC | 2 cut(s) | 321, 862 |
| GluI | GCNGC | 5 cut(s) | 14, 174, 177, 1881, 2338 |
| GsuI | CTGGAG | 1 cut(s) | 1596 |
| HaeIII | GGCC | 3 cut(s) | 738, 1033, 1460 |
| HapII | CCGG | 5 cut(s) | 373, 815, 1115, 1537, 2564 |
| HgaI | GACGC | 1 cut(s) | 2517 |
| HhaI | GCGC | 2 cut(s) | 322, 863 |
| Hin1I | GRCGYC | 1 cut(s) | 2509 |
| Hin6I | GCGC | 2 cut(s) | 320, 861 |
| HinP1I | GCGC | 2 cut(s) | 320, 861 |
| HincII | GTYRAC | 3 cut(s) | 550, 1005, 1190 |
| HindII | GTYRAC | 3 cut(s) | 550, 1005, 1190 |
| HindIII | AAGCTT | 3 cut(s) | 306, 947, 1241 |
| HpaI | GTTAAC | 1 cut(s) | 550 |
| HpaII | CCGG | 5 cut(s) | 373, 815, 1115, 1537, 2564 |
| HphI | GGTGA | 6 cut(s) | 101, 1118, 1506, 1521, 1953, 2393 |
| Hpy166II | GTNNAC | 9 cut(s) | 142, 230, 550, 781, 1005, 1028, 1178, 1190, 1688 |
| Hpy188I | TCNGA | 8 cut(s) | 1480, 1599, 1708, 1717, 2026, 2412, 2520, 2647 |
| Hpy8I | GTNNAC | 9 cut(s) | 142, 230, 550, 781, 1005, 1028, 1178, 1190, 1688 |
| Hpy99I | CGWCG | 1 cut(s) | 1194 |
| HpyCH4III | ACNGT | 5 cut(s) | 496, 604, 1424, 1892, 2459 |
| HpyCH4IV | ACGT | 2 cut(s) | 1079, 1192 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 860, 1674 |
| HpyF3I | CTNAG | 9 cut(s) | 246, 354, 1046, 1142, 1368, 1479, 1722, 1848, 2139 |
| HpySE526I | ACGT | 2 cut(s) | 1079, 1192 |
| Hsp92I | GRCGYC | 1 cut(s) | 2509 |
| HspAI | GCGC | 2 cut(s) | 320, 861 |
| Kpn2I | TCCGGA | 1 cut(s) | 1536 |
| KpnI | GGTACC | 1 cut(s) | 1423 |
| Ksp22I | TGATCA | 6 cut(s) | 1164, 1339, 1918, 2389, 2412, 2572 |
| KspAI | GTTAAC | 1 cut(s) | 550 |
| LguI | GCTCTTC | 1 cut(s) | 1995 |
| LmnI | GCTCC | 3 cut(s) | 991, 1699, 2092 |
| Lsp1109I | GCAGC | 4 cut(s) | 163, 185, 1892, 2324 |
| LweI | GCATC | 7 cut(s) | 199, 232, 712, 1198, 1393, 1415, 1765 |
| MaeII | ACGT | 2 cut(s) | 1079, 1192 |
| MaeIII | GTNAC | 5 cut(s) | 789, 1049, 1725, 1795, 2483 |
| MfeI | CAATTG | 4 cut(s) | 401, 456, 556, 2084 |
| MflI | RGATCY | 4 cut(s) | 811, 1138, 1735, 1954 |
| MhlI | GDGCHC | 1 cut(s) | 1529 |
| MlyI | GAGTC | 6 cut(s) | 55, 301, 896, 1195, 1514, 2337 |
| MmeI | TCCRAC | 4 cut(s) | 166, 320, 2220, 2603 |
| Mph1103I | ATGCAT | 2 cut(s) | 214, 1408 |
| MroI | TCCGGA | 1 cut(s) | 1536 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2055, 2289 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| MspI | CCGG | 5 cut(s) | 373, 815, 1115, 1537, 2564 |
| MspR9I | CCNGG | 4 cut(s) | 51, 617, 816, 903 |
| MunI | CAATTG | 4 cut(s) | 401, 456, 556, 2084 |
| MvaI | CCWGG | 3 cut(s) | 51, 617, 903 |
| MvnI | CGCG | 1 cut(s) | 322 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 860, 1674 |
| NciI | CCSGG | 1 cut(s) | 816 |
| NcoI | CCATGG | 1 cut(s) | 1203 |
| NlaIV | GGNNCC | 7 cut(s) | 813, 930, 1287, 1421, 1854, 2094, 2534 |
| NmuCI | GTSAC | 2 cut(s) | 1049, 1795 |
| NsiI | ATGCAT | 2 cut(s) | 214, 1408 |
| NspI | RCATGY | 5 cut(s) | 91, 216, 710, 1163, 2288 |
| NspV | TTCGAA | 1 cut(s) | 1280 |
| PaeI | GCATGC | 2 cut(s) | 91, 2288 |
| PagI | TCATGA | 1 cut(s) | 99 |
| PciI | ACATGT | 1 cut(s) | 706 |
| PciSI | GCTCTTC | 1 cut(s) | 1995 |
| PkrI | GCNGC | 5 cut(s) | 15, 175, 178, 1882, 2339 |
| PleI | GAGTC | 6 cut(s) | 54, 300, 895, 1194, 1513, 2336 |
| PpsI | GAGTC | 6 cut(s) | 54, 300, 895, 1194, 1513, 2336 |
| PpuMI | RGGWCCY | 2 cut(s) | 1285, 2671 |
| PscI | ACATGT | 1 cut(s) | 706 |
| PsiI | TTATAA | 1 cut(s) | 2540 |
| Psp124BI | GAGCTC | 1 cut(s) | 1529 |
| Psp5II | RGGWCCY | 2 cut(s) | 1285, 2671 |
| Psp6I | CCWGG | 3 cut(s) | 49, 615, 901 |
| PspGI | CCWGG | 3 cut(s) | 49, 615, 901 |
| PspN4I | GGNNCC | 7 cut(s) | 813, 930, 1287, 1421, 1854, 2094, 2534 |
| PspPI | GGNCC | 5 cut(s) | 736, 1285, 2060, 2532, 2671 |
| PspPPI | RGGWCCY | 2 cut(s) | 1285, 2671 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1020, 1052 |
| PstI | CTGCAG | 1 cut(s) | 181 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1721 |
| PsuI | RGATCY | 4 cut(s) | 811, 1138, 1735, 1954 |
| PvuII | CAGCTG | 1 cut(s) | 176 |
| RsaI | GTAC | 6 cut(s) | 678, 1038, 1421, 1592, 1942, 2549 |
| RsaNI | GTAC | 6 cut(s) | 677, 1037, 1420, 1591, 1941, 2548 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2055, 2289 |
| SacI | GAGCTC | 1 cut(s) | 1529 |
| SalI | GTCGAC | 1 cut(s) | 1188 |
| SapI | GCTCTTC | 1 cut(s) | 1995 |
| SatI | GCNGC | 5 cut(s) | 14, 174, 177, 1881, 2338 |
| Sau96I | GGNCC | 5 cut(s) | 736, 1285, 2060, 2532, 2671 |
| SchI | GAGTC | 6 cut(s) | 55, 301, 896, 1195, 1514, 2337 |
| ScrFI | CCNGG | 4 cut(s) | 51, 617, 816, 903 |
| SduI | GDGCHC | 1 cut(s) | 1529 |
| SfaNI | GCATC | 7 cut(s) | 199, 232, 712, 1198, 1393, 1415, 1765 |
| SfcI | CTRYAG | 2 cut(s) | 39, 177 |
| SfuI | TTCGAA | 1 cut(s) | 1280 |
| SinI | GGWCC | 4 cut(s) | 1285, 2060, 2532, 2671 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2055, 2289 |
| SmlI | CTYRAG | 2 cut(s) | 2551, 2557 |
| SmoI | CTYRAG | 2 cut(s) | 2551, 2557 |
| SpeI | ACTAGT | 1 cut(s) | 1442 |
| SphI | GCATGC | 2 cut(s) | 91, 2288 |
| SsiI | CCGC | 3 cut(s) | 16, 1965, 2109 |
| SstI | GAGCTC | 1 cut(s) | 1529 |
| StyD4I | CCNGG | 4 cut(s) | 49, 615, 814, 901 |
| StyI | CCWWGG | 3 cut(s) | 879, 1203, 2272 |
| TaaI | ACNGT | 5 cut(s) | 496, 604, 1424, 1892, 2459 |
| TaiI | ACGT | 2 cut(s) | 1082, 1195 |
| TaqI | TCGA | 6 cut(s) | 419, 490, 1189, 1280, 1401, 2331 |
| TatI | WGTACW | 1 cut(s) | 676 |
| TscAI | CASTG | 7 cut(s) | 119, 577, 609, 1054, 1897, 1951, 2131 |
| TseFI | GTSAC | 2 cut(s) | 1049, 1795 |
| TseI | GCWGC | 5 cut(s) | 13, 173, 176, 1880, 2337 |
| Tsp45I | GTSAC | 2 cut(s) | 1049, 1795 |
| TspGWI | ACGGA | 3 cut(s) | 276, 1712, 2480 |
| TspRI | CASTG | 7 cut(s) | 119, 577, 609, 1054, 1897, 1951, 2131 |
| VpaK11BI | GGWCC | 4 cut(s) | 1285, 2060, 2532, 2671 |
| XapI | RAATTY | 4 cut(s) | 801, 1563, 1645, 1865 |
| XbaI | TCTAGA | 1 cut(s) | 754 |
| XceI | RCATGY | 5 cut(s) | 91, 216, 710, 1163, 2288 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 996 |
| XmiI | GTMKAC | 3 cut(s) | 141, 229, 1189 |
| Zsp2I | ATGCAT | 2 cut(s) | 214, 1408 |