Domain of unknown function (DUF4378)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02390 AT5G02390 AT5G02390 |
| fragaria_vesca | FvH4_6g13720 |
| malus_domestica | MD04G1128800.v1.1 MD12G1141400.v1.1 |
| prunus_persica | Prupe.6G254700_v2.0.a1 |
| pyrus_communis | pycom04g11700 pycom12g13630 |
| rosa_chinensis | RchiOBHm_Chr3g0466591 |
| rosa_laevigata | RLG00000024561 |
| rosa_multiflora | Rmu_sc0020778.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00414320 |
| rosa_rugosa | Rorug03G0083000.1 Rorug03G0083100 |
| rosa_samantha | Rh3AG129900 Rh3BG151300 Rh3CG151000 Rh3DG151900 |
| rosa_wichuraiana | Rw3G012280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2651 |
| Acc36I | ACCTGC | 1 cut(s) | 1395 |
| Acc65I | GGTACC | 1 cut(s) | 1398 |
| AccB1I | GGYRCC | 1 cut(s) | 1398 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 962 |
| AccI | GTMKAC | 2 cut(s) | 549, 992 |
| AccII | CGCG | 1 cut(s) | 2282 |
| AciI | CCGC | 3 cut(s) | 1402, 1516, 2411 |
| AclWI | GGATC | 9 cut(s) | 446, 459, 587, 612, 803, 1134, 2060, 2402, 2456 |
| AcoI | YGGCCR | 2 cut(s) | 1019, 2325 |
| AcsI | RAATTY | 4 cut(s) | 798, 1542, 1844, 1979 |
| AcuI | CTGAAG | 6 cut(s) | 203, 288, 360, 549, 2160, 2651 |
| AcvI | CACGTG | 1 cut(s) | 1150 |
| AfaI | GTAC | 7 cut(s) | 146, 393, 541, 675, 1400, 1811, 2660 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 742, 899, 962, 1267 |
| AflIII | ACRYGT | 4 cut(s) | 97, 703, 1177, 2280 |
| AgeI | ACCGGT | 1 cut(s) | 1625 |
| AhlI | ACTAGT | 4 cut(s) | 542, 790, 1421, 2054 |
| AjnI | CCWGG | 3 cut(s) | 55, 64, 898 |
| AleI | CACNNNNGTG | 1 cut(s) | 2081 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2610, 2642 |
| Alw21I | GWGCWC | 1 cut(s) | 1508 |
| Alw26I | GTCTC | 4 cut(s) | 1168, 1811, 1946, 2665 |
| AlwI | GGATC | 9 cut(s) | 446, 459, 587, 612, 803, 1134, 2060, 2402, 2456 |
| AoxI | GGCC | 6 cut(s) | 315, 1019, 1194, 2325, 2577, 2643 |
| ApaI | GGGCCC | 1 cut(s) | 2647 |
| ApeKI | GCWGC | 1 cut(s) | 2448 |
| ApoI | RAATTY | 4 cut(s) | 798, 1542, 1844, 1979 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2774, 2806 |
| AseI | ATTAAT | 1 cut(s) | 771 |
| AsiGI | ACCGGT | 1 cut(s) | 1625 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2128 |
| Asp718I | GGTACC | 1 cut(s) | 1398 |
| AspA2I | CCTAGG | 1 cut(s) | 29 |
| AspLEI | GCGC | 3 cut(s) | 860, 1945, 2441 |
| AspS9I | GGNCC | 7 cut(s) | 316, 733, 1270, 2174, 2643, 2644, 2782 |
| AsuC2I | CCSGG | 3 cut(s) | 75, 614, 813 |
| AsuHPI | GGTGA | 5 cut(s) | 104, 1106, 1485, 1500, 2504 |
| AsuII | TTCGAA | 2 cut(s) | 432, 1265 |
| AvaII | GGWCC | 4 cut(s) | 733, 1270, 2174, 2782 |
| AvrII | CCTAGG | 1 cut(s) | 29 |
| BaeGI | GKGCMC | 1 cut(s) | 2647 |
| BamHI | GGATCC | 1 cut(s) | 451 |
| BanI | GGYRCC | 1 cut(s) | 1398 |
| BanII | GRGCYC | 2 cut(s) | 1508, 2647 |
| BbrPI | CACGTG | 1 cut(s) | 1150 |
| BbsI | GAAGAC | 2 cut(s) | 209, 2577 |
| Bbv12I | GWGCWC | 1 cut(s) | 1508 |
| BbvI | GCAGC | 1 cut(s) | 2435 |
| BceAI | ACGGC | 2 cut(s) | 1034, 2592 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 711, 745 |
| BciT130I | CCWGG | 3 cut(s) | 57, 66, 900 |
| BciVI | GTATCC | 1 cut(s) | 2242 |
| BclI | TGATCA | 4 cut(s) | 1039, 1321, 2500, 2683 |
| BcnI | CCSGG | 3 cut(s) | 75, 614, 813 |
| BcoDI | GTCTC | 4 cut(s) | 1168, 1811, 1946, 2665 |
| BcuI | ACTAGT | 4 cut(s) | 542, 790, 1421, 2054 |
| BfmI | CTRYAG | 2 cut(s) | 1686, 1722 |
| BfuAI | ACCTGC | 1 cut(s) | 1395 |
| BfuI | GTATCC | 1 cut(s) | 2242 |
| BisI | GCNGC | 1 cut(s) | 2449 |
| BlnI | CCTAGG | 1 cut(s) | 29 |
| BlsI | GCNGC | 1 cut(s) | 2450 |
| BmcAI | AGTACT | 1 cut(s) | 541 |
| Bme1390I | CCNGG | 6 cut(s) | 57, 66, 75, 614, 813, 900 |
| Bme18I | GGWCC | 4 cut(s) | 733, 1270, 2174, 2782 |
| BmgT120I | GGNCC | 7 cut(s) | 316, 733, 1270, 2174, 2643, 2644, 2782 |
| BmiI | GGNNCC | 5 cut(s) | 453, 1272, 1400, 2208, 2645 |
| BmrFI | CCNGG | 6 cut(s) | 57, 66, 75, 614, 813, 900 |
| BmrI | ACTGGG | 2 cut(s) | 1071, 2128 |
| BmsI | GCATC | 5 cut(s) | 25, 1372, 1394, 1744, 2209 |
| BmuI | ACTGGG | 2 cut(s) | 1071, 2128 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2295 |
| BpiI | GAAGAC | 2 cut(s) | 209, 2577 |
| BpmI | CTGGAG | 2 cut(s) | 609, 1575 |
| Bpu14I | TTCGAA | 2 cut(s) | 432, 1265 |
| BpuEI | CTTGAG | 2 cut(s) | 2683, 2689 |
| BpuMI | CCSGG | 3 cut(s) | 75, 614, 813 |
| Bsa29I | ATCGAT | 2 cut(s) | 419, 1031 |
| BsaAI | YACGTR | 2 cut(s) | 1150, 2079 |
| BsaI | GGTCTC | 1 cut(s) | 2665 |
| BsaJI | CCNNGG | 7 cut(s) | 29, 56, 65, 74, 876, 1188, 2386 |
| BsaWI | WCCGGW | 4 cut(s) | 372, 1102, 1625, 2674 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 742, 899, 962, 1267 |
| Bse118I | RCCGGY | 1 cut(s) | 1625 |
| Bse1I | ACTGG | 5 cut(s) | 122, 592, 1077, 2134, 2414 |
| Bse3DI | GCAATG | 1 cut(s) | 1277 |
| BseBI | CCWGG | 3 cut(s) | 57, 66, 900 |
| BseCI | ATCGAT | 2 cut(s) | 419, 1031 |
| BseDI | CCNNGG | 7 cut(s) | 29, 56, 65, 74, 876, 1188, 2386 |
| BseGI | GGATG | 7 cut(s) | 40, 296, 640, 1197, 1639, 1756, 2742 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 742, 899, 962, 1267 |
| BseMI | GCAATG | 1 cut(s) | 1277 |
| BseMII | CTCAG | 3 cut(s) | 2022, 2111, 2244 |
| BseNI | ACTGG | 5 cut(s) | 122, 592, 1077, 2134, 2414 |
| BseRI | GAGGAG | 2 cut(s) | 810, 1596 |
| BseSI | GKGCMC | 1 cut(s) | 2647 |
| BseXI | GCAGC | 1 cut(s) | 2435 |
| BseYI | CCCAGC | 2 cut(s) | 1010, 1355 |
| BsgI | GTGCAG | 3 cut(s) | 195, 582, 2493 |
| Bsh1236I | CGCG | 1 cut(s) | 2282 |
| BshFI | GGCC | 6 cut(s) | 317, 1021, 1196, 2327, 2579, 2645 |
| BshNI | GGYRCC | 1 cut(s) | 1398 |
| BshTI | ACCGGT | 1 cut(s) | 1625 |
| BshVI | ATCGAT | 2 cut(s) | 419, 1031 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1508 |
| BsiSI | CCGG | 7 cut(s) | 74, 373, 614, 812, 1103, 1626, 2675 |
| BslFI | GGGAC | 4 cut(s) | 596, 1880, 2015, 2404 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 742, 899, 962, 1267 |
| BsmAI | GTCTC | 4 cut(s) | 1168, 1811, 1946, 2665 |
| BsmBI | CGTCTC | 1 cut(s) | 1811 |
| BsmFI | GGGAC | 4 cut(s) | 596, 1880, 2015, 2404 |
| BsnI | GGCC | 6 cut(s) | 317, 1021, 1196, 2327, 2579, 2645 |
| Bso31I | GGTCTC | 1 cut(s) | 2665 |
| Bsp119I | TTCGAA | 2 cut(s) | 432, 1265 |
| Bsp120I | GGGCCC | 1 cut(s) | 2643 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1508, 2647 |
| Bsp1407I | TGTACA | 2 cut(s) | 144, 1809 |
| Bsp19I | CCATGG | 1 cut(s) | 1188 |
| BspACI | CCGC | 3 cut(s) | 1402, 1516, 2411 |
| BspANI | GGCC | 6 cut(s) | 317, 1021, 1196, 2327, 2579, 2645 |
| BspCNI | CTCAG | 3 cut(s) | 2023, 2112, 2245 |
| BspDI | ATCGAT | 2 cut(s) | 419, 1031 |
| BspFNI | CGCG | 1 cut(s) | 2282 |
| BspHI | TCATGA | 1 cut(s) | 102 |
| BspLI | GGNNCC | 5 cut(s) | 453, 1272, 1400, 2208, 2645 |
| BspMI | ACCTGC | 1 cut(s) | 1395 |
| BspPI | GGATC | 9 cut(s) | 446, 459, 587, 612, 803, 1134, 2060, 2402, 2456 |
| BspQI | GCTCTTC | 1 cut(s) | 526 |
| BspT104I | TTCGAA | 2 cut(s) | 432, 1265 |
| BspT107I | GGYRCC | 1 cut(s) | 1398 |
| BspTNI | GGTCTC | 1 cut(s) | 2665 |
| BsrDI | GCAATG | 1 cut(s) | 1277 |
| BsrFI | RCCGGY | 1 cut(s) | 1625 |
| BsrGI | TGTACA | 2 cut(s) | 144, 1809 |
| BsrI | ACTGG | 5 cut(s) | 122, 592, 1077, 2134, 2414 |
| BssAI | RCCGGY | 1 cut(s) | 1625 |
| BssECI | CCNNGG | 7 cut(s) | 29, 56, 65, 74, 876, 1188, 2386 |
| BssT1I | CCWWGG | 4 cut(s) | 29, 876, 1188, 2386 |
| Bst2UI | CCWGG | 3 cut(s) | 57, 66, 900 |
| Bst4CI | ACNGT | 5 cut(s) | 601, 673, 1871, 2006, 2570 |
| Bst6I | CTCTTC | 2 cut(s) | 350, 526 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 335 |
| BstAUI | TGTACA | 2 cut(s) | 144, 1809 |
| BstBAI | YACGTR | 2 cut(s) | 1150, 2079 |
| BstBI | TTCGAA | 2 cut(s) | 432, 1265 |
| BstC8I | GCNNGC | 5 cut(s) | 92, 1448, 1645, 2400, 2613 |
| BstDEI | CTNAG | 9 cut(s) | 243, 351, 644, 933, 1130, 1962, 2031, 2120, 2253 |
| BstDSI | CCRYGG | 1 cut(s) | 1188 |
| BstF5I | GGATG | 7 cut(s) | 40, 296, 640, 1197, 1639, 1756, 2742 |
| BstFNI | CGCG | 1 cut(s) | 2282 |
| BstHHI | GCGC | 3 cut(s) | 860, 1945, 2441 |
| BstMAI | GTCTC | 4 cut(s) | 1168, 1811, 1946, 2665 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 335, 857, 1653, 2445 |
| BstNI | CCWGG | 3 cut(s) | 57, 66, 900 |
| BstNSI | RCATGY | 6 cut(s) | 94, 101, 213, 707, 1181, 2402 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2295 |
| BstSCI | CCNGG | 6 cut(s) | 55, 64, 73, 612, 811, 898 |
| BstSFI | CTRYAG | 2 cut(s) | 1686, 1722 |
| BstSLI | GKGCMC | 1 cut(s) | 2647 |
| BstUI | CGCG | 1 cut(s) | 2282 |
| BstV1I | GCAGC | 1 cut(s) | 2435 |
| BstV2I | GAAGAC | 2 cut(s) | 209, 2577 |
| BstX2I | RGATCY | 4 cut(s) | 451, 592, 1126, 2065 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1534 |
| BstYI | RGATCY | 4 cut(s) | 451, 592, 1126, 2065 |
| Bsu15I | ATCGAT | 2 cut(s) | 419, 1031 |
| BsuI | GTATCC | 1 cut(s) | 2242 |
| BsuRI | GGCC | 6 cut(s) | 317, 1021, 1196, 2327, 2579, 2645 |
| BsuTUI | ATCGAT | 2 cut(s) | 419, 1031 |
| BtgI | CCRYGG | 1 cut(s) | 1188 |
| BtgZI | GCGATG | 1 cut(s) | 1596 |
| BtsCI | GGATG | 7 cut(s) | 40, 296, 640, 1197, 1639, 1756, 2742 |
| BtsI | GCAGTG | 1 cut(s) | 2245 |
| BtsIMutI | CAGTG | 4 cut(s) | 115, 606, 2011, 2245 |
| BveI | ACCTGC | 1 cut(s) | 1395 |
| Cac8I | GCNNGC | 5 cut(s) | 92, 1448, 1645, 2400, 2613 |
| CciI | TCATGA | 1 cut(s) | 102 |
| CfoI | GCGC | 3 cut(s) | 860, 1945, 2441 |
| Cfr10I | RCCGGY | 1 cut(s) | 1625 |
| Cfr13I | GGNCC | 7 cut(s) | 316, 733, 1270, 2174, 2643, 2644, 2782 |
| ClaI | ATCGAT | 2 cut(s) | 419, 1031 |
| CseI | GACGC | 2 cut(s) | 41, 728 |
| Csp6I | GTAC | 7 cut(s) | 145, 392, 540, 674, 1399, 1810, 2659 |
| CspAI | ACCGGT | 1 cut(s) | 1625 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 136, 171 |
| CviQI | GTAC | 7 cut(s) | 145, 392, 540, 674, 1399, 1810, 2659 |
| DdeI | CTNAG | 9 cut(s) | 243, 351, 644, 933, 1130, 1962, 2031, 2120, 2253 |
| EaeI | YGGCCR | 2 cut(s) | 1019, 2325 |
| Eam1104I | CTCTTC | 2 cut(s) | 350, 526 |
| EarI | CTCTTC | 2 cut(s) | 350, 526 |
| EciI | GGCGGA | 1 cut(s) | 2400 |
| Ecl136II | GAGCTC | 1 cut(s) | 1506 |
| Eco130I | CCWWGG | 4 cut(s) | 29, 876, 1188, 2386 |
| Eco24I | GRGCYC | 2 cut(s) | 1508, 2647 |
| Eco31I | GGTCTC | 1 cut(s) | 2665 |
| Eco47I | GGWCC | 4 cut(s) | 733, 1270, 2174, 2782 |
| Eco53kI | GAGCTC | 1 cut(s) | 1506 |
| Eco57I | CTGAAG | 6 cut(s) | 203, 288, 360, 549, 2160, 2651 |
| Eco72I | CACGTG | 1 cut(s) | 1150 |
| EcoICRI | GAGCTC | 1 cut(s) | 1506 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1270, 2644, 2782 |
| EcoRII | CCWGG | 3 cut(s) | 55, 64, 898 |
| EcoT14I | CCWWGG | 4 cut(s) | 29, 876, 1188, 2386 |
| EcoT22I | ATGCAT | 2 cut(s) | 211, 1387 |
| EcoT38I | GRGCYC | 2 cut(s) | 1508, 2647 |
| ErhI | CCWWGG | 4 cut(s) | 29, 876, 1188, 2386 |
| Esp3I | CGTCTC | 1 cut(s) | 1811 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 508, 540 |
| FaqI | GGGAC | 4 cut(s) | 596, 1880, 2015, 2404 |
| FauNDI | CATATG | 1 cut(s) | 1456 |
| FbaI | TGATCA | 4 cut(s) | 1039, 1321, 2500, 2683 |
| FblI | GTMKAC | 2 cut(s) | 549, 992 |
| Fnu4HI | GCNGC | 1 cut(s) | 2449 |
| FokI | GGATG | 7 cut(s) | 47, 283, 647, 1184, 1646, 1763, 2749 |
| FriOI | GRGCYC | 2 cut(s) | 1508, 2647 |
| Fsp4HI | GCNGC | 1 cut(s) | 2449 |
| GlaI | GCGC | 3 cut(s) | 859, 1944, 2440 |
| GluI | GCNGC | 1 cut(s) | 2449 |
| GsaI | CCCAGC | 2 cut(s) | 1014, 1359 |
| GsuI | CTGGAG | 2 cut(s) | 609, 1575 |
| HaeIII | GGCC | 6 cut(s) | 317, 1021, 1196, 2327, 2579, 2645 |
| HapII | CCGG | 7 cut(s) | 74, 373, 614, 812, 1103, 1626, 2675 |
| HgaI | GACGC | 2 cut(s) | 41, 728 |
| HhaI | GCGC | 3 cut(s) | 860, 1945, 2441 |
| Hin6I | GCGC | 3 cut(s) | 858, 1943, 2439 |
| HinP1I | GCGC | 3 cut(s) | 858, 1943, 2439 |
| HincII | GTYRAC | 1 cut(s) | 550 |
| HindII | GTYRAC | 1 cut(s) | 550 |
| HindIII | AAGCTT | 1 cut(s) | 303 |
| HpaII | CCGG | 7 cut(s) | 74, 373, 614, 812, 1103, 1626, 2675 |
| HphI | GGTGA | 5 cut(s) | 104, 1106, 1485, 1500, 2504 |
| Hpy166II | GTNNAC | 6 cut(s) | 550, 778, 993, 1166, 1667, 1810 |
| Hpy8I | GTNNAC | 6 cut(s) | 550, 778, 993, 1166, 1667, 1810 |
| HpyCH4III | ACNGT | 5 cut(s) | 601, 673, 1871, 2006, 2570 |
| HpyCH4IV | ACGT | 3 cut(s) | 1149, 2078, 2679 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 335, 857, 1653, 2445 |
| HpyF3I | CTNAG | 9 cut(s) | 243, 351, 644, 933, 1130, 1962, 2031, 2120, 2253 |
| HpySE526I | ACGT | 3 cut(s) | 1149, 2078, 2679 |
| HspAI | GCGC | 3 cut(s) | 858, 1943, 2439 |
| KpnI | GGTACC | 1 cut(s) | 1402 |
| Ksp22I | TGATCA | 4 cut(s) | 1039, 1321, 2500, 2683 |
| LguI | GCTCTTC | 1 cut(s) | 526 |
| LmnI | GCTCC | 3 cut(s) | 1528, 1678, 2206 |
| Lsp1109I | GCAGC | 1 cut(s) | 2435 |
| LweI | GCATC | 5 cut(s) | 25, 1372, 1394, 1744, 2209 |
| MaeII | ACGT | 3 cut(s) | 1149, 2078, 2679 |
| MaeIII | GTNAC | 6 cut(s) | 583, 786, 1774, 1909, 2594, 2708 |
| MfeI | CAATTG | 3 cut(s) | 401, 456, 556 |
| MflI | RGATCY | 4 cut(s) | 451, 592, 1126, 2065 |
| MhlI | GDGCHC | 2 cut(s) | 1508, 2647 |
| MluI | ACGCGT | 1 cut(s) | 2280 |
| MlyI | GAGTC | 4 cut(s) | 298, 893, 1096, 2305 |
| MmeI | TCCRAC | 4 cut(s) | 317, 2334, 2597, 2714 |
| Mph1103I | ATGCAT | 2 cut(s) | 211, 1387 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2128 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2081, 2169, 2403 |
| MspI | CCGG | 7 cut(s) | 74, 373, 614, 812, 1103, 1626, 2675 |
| MspR9I | CCNGG | 6 cut(s) | 57, 66, 75, 614, 813, 900 |
| MunI | CAATTG | 3 cut(s) | 401, 456, 556 |
| MvaI | CCWGG | 3 cut(s) | 57, 66, 900 |
| MvnI | CGCG | 1 cut(s) | 2282 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 335, 857, 1653, 2445 |
| NciI | CCSGG | 3 cut(s) | 75, 614, 813 |
| NcoI | CCATGG | 1 cut(s) | 1188 |
| NdeI | CATATG | 1 cut(s) | 1456 |
| NlaIV | GGNNCC | 5 cut(s) | 453, 1272, 1400, 2208, 2645 |
| NmeAIII | GCCGAG | 1 cut(s) | 2353 |
| NsiI | ATGCAT | 2 cut(s) | 211, 1387 |
| NspI | RCATGY | 6 cut(s) | 94, 101, 213, 707, 1181, 2402 |
| NspV | TTCGAA | 2 cut(s) | 432, 1265 |
| OliI | CACNNNNGTG | 1 cut(s) | 2081 |
| PaeI | GCATGC | 2 cut(s) | 94, 2402 |
| PagI | TCATGA | 1 cut(s) | 102 |
| PciI | ACATGT | 3 cut(s) | 97, 703, 1177 |
| PciSI | GCTCTTC | 1 cut(s) | 526 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2128 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 962 |
| PinAI | ACCGGT | 1 cut(s) | 1625 |
| PkrI | GCNGC | 1 cut(s) | 2450 |
| PleI | GAGTC | 4 cut(s) | 297, 892, 1095, 2304 |
| PmaCI | CACGTG | 1 cut(s) | 1150 |
| PmlI | CACGTG | 1 cut(s) | 1150 |
| PpsI | GAGTC | 4 cut(s) | 297, 892, 1095, 2304 |
| Ppu21I | YACGTR | 2 cut(s) | 1150, 2079 |
| PpuMI | RGGWCCY | 2 cut(s) | 1270, 2782 |
| PscI | ACATGT | 3 cut(s) | 97, 703, 1177 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2295 |
| PshBI | ATTAAT | 1 cut(s) | 771 |
| PsiI | TTATAA | 1 cut(s) | 2651 |
| Psp124BI | GAGCTC | 1 cut(s) | 1508 |
| Psp5II | RGGWCCY | 2 cut(s) | 1270, 2782 |
| Psp6I | CCWGG | 3 cut(s) | 55, 64, 898 |
| PspCI | CACGTG | 1 cut(s) | 1150 |
| PspFI | CCCAGC | 2 cut(s) | 1010, 1355 |
| PspGI | CCWGG | 3 cut(s) | 55, 64, 898 |
| PspN4I | GGNNCC | 5 cut(s) | 453, 1272, 1400, 2208, 2645 |
| PspOMI | GGGCCC | 1 cut(s) | 2643 |
| PspPI | GGNCC | 7 cut(s) | 316, 733, 1270, 2174, 2643, 2644, 2782 |
| PspPPI | RGGWCCY | 2 cut(s) | 1270, 2782 |
| PsuI | RGATCY | 4 cut(s) | 451, 592, 1126, 2065 |
| RsaI | GTAC | 7 cut(s) | 146, 393, 541, 675, 1400, 1811, 2660 |
| RsaNI | GTAC | 7 cut(s) | 145, 392, 540, 674, 1399, 1810, 2659 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2081, 2169, 2403 |
| SacI | GAGCTC | 1 cut(s) | 1508 |
| SalI | GTCGAC | 1 cut(s) | 548 |
| SapI | GCTCTTC | 1 cut(s) | 526 |
| SatI | GCNGC | 1 cut(s) | 2449 |
| Sau96I | GGNCC | 7 cut(s) | 316, 733, 1270, 2174, 2643, 2644, 2782 |
| ScaI | AGTACT | 1 cut(s) | 541 |
| SchI | GAGTC | 4 cut(s) | 298, 893, 1096, 2305 |
| ScrFI | CCNGG | 6 cut(s) | 57, 66, 75, 614, 813, 900 |
| SduI | GDGCHC | 2 cut(s) | 1508, 2647 |
| SfaNI | GCATC | 5 cut(s) | 25, 1372, 1394, 1744, 2209 |
| SfcI | CTRYAG | 2 cut(s) | 1686, 1722 |
| SfuI | TTCGAA | 2 cut(s) | 432, 1265 |
| SinI | GGWCC | 4 cut(s) | 733, 1270, 2174, 2782 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2081, 2169, 2403 |
| SmlI | CTYRAG | 2 cut(s) | 2662, 2668 |
| SmoI | CTYRAG | 2 cut(s) | 2662, 2668 |
| SpeI | ACTAGT | 4 cut(s) | 542, 790, 1421, 2054 |
| SphI | GCATGC | 2 cut(s) | 94, 2402 |
| SsiI | CCGC | 3 cut(s) | 1402, 1516, 2411 |
| SstI | GAGCTC | 1 cut(s) | 1508 |
| StyD4I | CCNGG | 6 cut(s) | 55, 64, 73, 612, 811, 898 |
| StyI | CCWWGG | 4 cut(s) | 29, 876, 1188, 2386 |
| TaaI | ACNGT | 5 cut(s) | 601, 673, 1871, 2006, 2570 |
| TaiI | ACGT | 3 cut(s) | 1152, 2081, 2682 |
| TaqI | TCGA | 8 cut(s) | 419, 432, 490, 549, 976, 1031, 1265, 1380 |
| TaqII | GACCGA | 1 cut(s) | 721 |
| TatI | WGTACW | 4 cut(s) | 144, 539, 673, 1809 |
| TscAI | CASTG | 4 cut(s) | 122, 606, 2011, 2245 |
| TseI | GCWGC | 1 cut(s) | 2448 |
| TspGWI | ACGGA | 1 cut(s) | 273 |
| TspRI | CASTG | 4 cut(s) | 122, 606, 2011, 2245 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 962 |
| VpaK11BI | GGWCC | 4 cut(s) | 733, 1270, 2174, 2782 |
| VspI | ATTAAT | 1 cut(s) | 771 |
| XapI | RAATTY | 4 cut(s) | 798, 1542, 1844, 1979 |
| XbaI | TCTAGA | 1 cut(s) | 751 |
| XceI | RCATGY | 6 cut(s) | 94, 101, 213, 707, 1181, 2402 |
| XmaJI | CCTAGG | 1 cut(s) | 29 |
| XmiI | GTMKAC | 2 cut(s) | 549, 992 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2128 |
| ZrmI | AGTACT | 1 cut(s) | 541 |
| Zsp2I | ATGCAT | 2 cut(s) | 211, 1387 |