FvH4_6g13910
NAC Family

Dol-P-Glc Glc(2)Man(9)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
8536970 .. 8539951
2982 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g13910.t9

Sequence Viewer

Length: 1524 bp
ATGGGTAGGATAGCTGTGGCAATCATTGTTAGTTTGTGGGTTGTTCCCATCTCCATCCTTGTCAATCACATTGTTCCTCAACCTTACATGGATGAGATATTCCATGTGCCTCAGGCTCAACAGTACTGTAGAGGCAATTTCAGAAGCTGGGATCCCATGATCACTACTCCTCCTGGCCTGTACTATCTTTCATTAGCCCATGTTGCTTGTTTGTTTCCAGGCATGTCTTTAGTAAAAGCAGCCTCTTCGTTTTCTGAAGGCTGCTCCACTGCGATTCTTCGCTCCACGAATGGTGTTTTGGCGGTGATCTGCAGTGTTCTTGTGTATGAGATAATCAGACATTTGAGACCAAATCTTGATGAGAGAAAAGCAAGTCTTTTTGCGGTGGTTCTAGCTATGTATCCTCTCCATTGGTTCTTTACGTTTCTCTATTATACAGATGTTGCATCACTTGCTGCGGTGCTTGCTGTGTATCTTGCATGTTTGAAGAAGAAGTACTGGTTCAGTGCATTGCTTGGTGCCTTGGCAGTTGTTATTCGGCAAACGAATATTGTATGGATGCTTTTTGTGTGTTGCTGCGAGGTTATAAATATTACTTTGGTTGGTCAAAGAGATAAGATAGATGTAGATAACACTGACTACTCAGTTAGGAAACATAGTCGGCCAACTCCTAAAAACAGTGTTTCAAACTTGAGAAAGCGGAAGGTCAGTACTGCAGCAGATACTGAGATACATTCAATGCTGGCTTCAAGTGTTTCTTCTCAAAACTACACATCAGGTATTATCCATGAAACTAAGGCCATCTTTCAGAAACTGTGGCACATGAAGTTGGAGTTTGTAGTTTCTTTCAGTCCATTTATTATGGTATTTGCAGCCTTTGTTGCTTTTGTTCGTTGGAATGGGAGTATTGTTCTAGGTGCGAAAGAAGCTCATGCAGTTTCTCCACATTTTGCACAGATCATGTATTTTGGTCTGTTTTCTGTTCTTGCTATGGCTCCAACATACTGTAGTTTCAGTCAAACTGCAGAGTTATTCCAGTCAATTTGGAAGAACAAGTCCGTTGGTTTCTTTCGAATTTCCTTGGCACTTGTCGCTGGCTTCATCTCCATTCATTTTTTCAGCATAGCTCATCCCTATCTTCTTGCGGATAATCGGCATTATCCCTTTTATCTTTGGCAGAAGGTCATCAAAGCTCATTGGTTGATGAAGTACTTTCTAGTCCCACTTTATGTTTATTCATGGCTTTCCATCATCACTAGATCGGGGAAGGTTCAGAGGAAGATCTGGCTGCTGGCATTTTCCTTGGCCACTGCTGCAGTTTTGGTCCCAGCGCCACTGATTGAGTTCAGATACTATACTATTCCATTCTTTTTCTTGATACTACATTCTCATATTGATGATTACCAAAGTTGGCTCATCATGGGGTTTCTGTATACAGCTGTCAACGCCTTCACAATGGTAATGTTCTTGTATTGTCCATTCCACTGGTCCCATGAACCTGGGACACAGAGGTTTATATGGTAG

Protein Analysis

508

Amino Acids

57.99

Weight (kDa)

9.38

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIE2_ALG10 PF04922 25 - 373 4.5e-88 DIE2/ALG10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 518
AccI GTMKAC 1 cut(s) 1433
AciI CCGC 5 cut(s) 302, 383, 458, 700, 1145
AclWI GGATC 2 cut(s) 146, 159
AcoI YGGCCR 2 cut(s) 662, 1305
AcsI RAATTY 1 cut(s) 1074
AcuI CTGAAG 1 cut(s) 276
AfaI GTAC 5 cut(s) 125, 182, 497, 712, 1211
AgsI TTSAA 4 cut(s) 487, 687, 738, 750
AjnI CCWGG 3 cut(s) 172, 217, 1498
AjuI GAANNNNNNNTTGG 2 cut(s) 281, 313
AluBI AGCT 7 cut(s) 14, 147, 395, 929, 1127, 1193, 1439
AluI AGCT 7 cut(s) 14, 147, 395, 929, 1127, 1193, 1439
Alw26I GTCTC 1 cut(s) 340
AlwI GGATC 2 cut(s) 146, 159
AlwNI CAGNNNCTG 3 cut(s) 147, 725, 814
AoxI GGCC 4 cut(s) 175, 662, 798, 1305
ApeKI GCWGC 8 cut(s) 239, 261, 455, 576, 716, 872, 1288, 1313
ApoI RAATTY 1 cut(s) 1074
AspLEI GCGC 1 cut(s) 1333
AspS9I GGNCC 2 cut(s) 1324, 1488
AsuHPI GGTGA 1 cut(s) 316
AsuII TTCGAA 1 cut(s) 1072
AvaII GGWCC 2 cut(s) 1324, 1488
AxyI CCTNAGG 1 cut(s) 111
BalI TGGCCA 1 cut(s) 1307
BamHI GGATCC 1 cut(s) 151
BanI GGYRCC 1 cut(s) 518
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
BbvI GCAGC 8 cut(s) 248, 251, 442, 563, 728, 884, 1275, 1300
BccI CCATC 4 cut(s) 56, 62, 809, 1256
BcgI CGANNNNNNTGC 2 cut(s) 228, 262
BciT130I CCWGG 3 cut(s) 174, 219, 1500
BciVI GTATCC 1 cut(s) 411
BclI TGATCA 1 cut(s) 159
BcoDI GTCTC 1 cut(s) 340
BfaI CTAG 4 cut(s) 392, 914, 1217, 1257
BfmI CTRYAG 6 cut(s) 127, 310, 714, 1006, 1023, 1314
BfoI RGCGCY 1 cut(s) 1334
BfuI GTATCC 1 cut(s) 411
BglII AGATCT 1 cut(s) 1281
BisI GCNGC 8 cut(s) 240, 262, 456, 577, 717, 873, 1289, 1314
BlsI GCNGC 8 cut(s) 241, 263, 457, 578, 718, 874, 1290, 1315
BmcAI AGTACT 4 cut(s) 125, 497, 712, 1211
Bme1390I CCNGG 3 cut(s) 174, 219, 1500
Bme18I GGWCC 2 cut(s) 1324, 1488
BmgT120I GGNCC 2 cut(s) 1324, 1488
BmiI GGNNCC 5 cut(s) 153, 520, 996, 1326, 1490
BmrFI CCNGG 3 cut(s) 174, 219, 1500
BmsI GCATC 2 cut(s) 455, 549
Bpu14I TTCGAA 1 cut(s) 1072
BpuEI CTTGAG 1 cut(s) 712
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 4 cut(s) 522, 1080, 1302, 1499
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bse1I ACTGG 3 cut(s) 503, 1036, 1490
Bse21I CCTNAGG 1 cut(s) 111
Bse3DI GCAATG 1 cut(s) 509
BseBI CCWGG 3 cut(s) 174, 219, 1500
BseDI CCNNGG 4 cut(s) 522, 1080, 1302, 1499
BseGI GGATG 4 cut(s) 54, 97, 564, 1129
BseMI GCAATG 1 cut(s) 509
BseMII CTCAG 3 cut(s) 125, 657, 717
BseNI ACTGG 3 cut(s) 503, 1036, 1490
BseRI GAGGAG 1 cut(s) 159
BseXI GCAGC 8 cut(s) 248, 251, 442, 563, 728, 884, 1275, 1300
BseYI CCCAGC 2 cut(s) 147, 1327
BshFI GGCC 4 cut(s) 177, 664, 800, 1307
BshNI GGYRCC 1 cut(s) 518
BslFI GGGAC 4 cut(s) 1205, 1310, 1474, 1516
BsmAI GTCTC 1 cut(s) 340
BsmFI GGGAC 4 cut(s) 1205, 1310, 1474, 1516
BsnI GGCC 4 cut(s) 177, 664, 800, 1307
Bso31I GGTCTC 1 cut(s) 340
Bsp119I TTCGAA 1 cut(s) 1072
Bsp143I GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
BspACI CCGC 5 cut(s) 302, 383, 458, 700, 1145
BspANI GGCC 4 cut(s) 177, 664, 800, 1307
BspCNI CTCAG 3 cut(s) 124, 656, 718
BspLI GGNNCC 5 cut(s) 153, 520, 996, 1326, 1490
BspMAI CTGCAG 4 cut(s) 314, 718, 1027, 1318
BspPI GGATC 2 cut(s) 146, 159
BspT104I TTCGAA 1 cut(s) 1072
BspT107I GGYRCC 1 cut(s) 518
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 509
BsrI ACTGG 3 cut(s) 503, 1036, 1490
BssECI CCNNGG 4 cut(s) 522, 1080, 1302, 1499
BssMI GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
BssNAI GTATAC 1 cut(s) 1434
BssT1I CCWWGG 3 cut(s) 522, 1080, 1302
Bst1107I GTATAC 1 cut(s) 1434
Bst2UI CCWGG 3 cut(s) 174, 219, 1500
Bst4CI ACNGT 5 cut(s) 123, 128, 680, 816, 1007
Bst6I CTCTTC 1 cut(s) 250
BstAPI GCANNNNNTGC 1 cut(s) 452
BstBI TTCGAA 1 cut(s) 1072
BstC8I GCNNGC 4 cut(s) 465, 744, 1096, 1293
BstDEI CTNAG 4 cut(s) 111, 643, 726, 795
BstF5I GGATG 4 cut(s) 54, 97, 564, 1129
BstH2I RGCGCY 1 cut(s) 1334
BstHHI GCGC 1 cut(s) 1333
BstKTI GATC 6 cut(s) 154, 162, 309, 960, 1262, 1284
BstMAI GTCTC 1 cut(s) 340
BstMBI GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
BstMWI GCNNNNNNNGC 8 cut(s) 203, 452, 464, 881, 926, 1091, 1313, 1445
BstNI CCWGG 3 cut(s) 174, 219, 1500
BstNSI RCATGY 2 cut(s) 226, 483
BstSCI CCNGG 3 cut(s) 172, 217, 1498
BstSFI CTRYAG 6 cut(s) 127, 310, 714, 1006, 1023, 1314
BstV1I GCAGC 8 cut(s) 248, 251, 442, 563, 728, 884, 1275, 1300
BstX2I RGATCY 2 cut(s) 151, 1281
BstXI CCANNNNNNTGG 2 cut(s) 1485, 1499
BstYI RGATCY 2 cut(s) 151, 1281
BstZ17I GTATAC 1 cut(s) 1434
Bsu36I CCTNAGG 1 cut(s) 111
BsuI GTATCC 1 cut(s) 411
BsuRI GGCC 4 cut(s) 177, 664, 800, 1307
BtsCI GGATG 4 cut(s) 54, 97, 564, 1129
BtsI GCAGTG 3 cut(s) 267, 319, 1308
BtsIMutI CAGTG 8 cut(s) 267, 319, 511, 633, 685, 1308, 1334, 1483
Cac8I GCNNGC 4 cut(s) 465, 744, 1096, 1293
CaiI CAGNNNCTG 3 cut(s) 147, 725, 814
CfoI GCGC 1 cut(s) 1333
Cfr13I GGNCC 2 cut(s) 1324, 1488
Csp6I GTAC 5 cut(s) 124, 181, 496, 711, 1210
CviQI GTAC 5 cut(s) 124, 181, 496, 711, 1210
DdeI CTNAG 4 cut(s) 111, 643, 726, 795
DpnI GATC 6 cut(s) 153, 161, 308, 959, 1261, 1283
DpnII GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
EaeI YGGCCR 2 cut(s) 662, 1305
Eam1104I CTCTTC 1 cut(s) 250
EarI CTCTTC 1 cut(s) 250
Eco130I CCWWGG 3 cut(s) 522, 1080, 1302
Eco31I GGTCTC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 1324, 1488
Eco57I CTGAAG 1 cut(s) 276
Eco81I CCTNAGG 1 cut(s) 111
EcoRII CCWGG 3 cut(s) 172, 217, 1498
EcoT14I CCWWGG 3 cut(s) 522, 1080, 1302
ErhI CCWWGG 3 cut(s) 522, 1080, 1302
FalI AAGNNNNNCTT 6 cut(s) 360, 392, 742, 774, 788, 820
FaqI GGGAC 4 cut(s) 1205, 1310, 1474, 1516
FbaI TGATCA 1 cut(s) 159
FblI GTMKAC 1 cut(s) 1433
Fnu4HI GCNGC 8 cut(s) 240, 262, 456, 577, 717, 873, 1289, 1314
FokI GGATG 4 cut(s) 41, 104, 571, 1116
Fsp4HI GCNGC 8 cut(s) 240, 262, 456, 577, 717, 873, 1289, 1314
FspBI CTAG 4 cut(s) 392, 914, 1217, 1257
GlaI GCGC 1 cut(s) 1332
GluI GCNGC 8 cut(s) 240, 262, 456, 577, 717, 873, 1289, 1314
GsaI CCCAGC 2 cut(s) 151, 1331
HaeII RGCGCY 1 cut(s) 1334
HaeIII GGCC 4 cut(s) 177, 664, 800, 1307
HhaI GCGC 1 cut(s) 1333
Hin6I GCGC 1 cut(s) 1331
HinP1I GCGC 1 cut(s) 1331
HincII GTYRAC 1 cut(s) 1444
HindII GTYRAC 1 cut(s) 1444
HinfI GANTC 1 cut(s) 274
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 2 cut(s) 1434, 1444
Hpy188I TCNGA 6 cut(s) 143, 256, 338, 810, 1275, 1349
Hpy188III TCNNGA 2 cut(s) 356, 1375
Hpy8I GTNNAC 2 cut(s) 1434, 1444
HpyAV CCTTC 5 cut(s) 251, 697, 1174, 1261, 1459
HpyCH4III ACNGT 5 cut(s) 123, 128, 680, 816, 1007
HpyCH4IV ACGT 1 cut(s) 422
HpyF10VI GCNNNNNNNGC 8 cut(s) 203, 452, 464, 881, 926, 1091, 1313, 1445
HpyF3I CTNAG 4 cut(s) 111, 643, 726, 795
HpySE526I ACGT 1 cut(s) 422
HspAI GCGC 1 cut(s) 1331
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
LmnI GCTCC 3 cut(s) 269, 287, 1000
Lsp1109I GCAGC 8 cut(s) 248, 251, 442, 563, 728, 884, 1275, 1300
LweI GCATC 2 cut(s) 455, 549
MaeI CTAG 4 cut(s) 392, 914, 1217, 1257
MaeII ACGT 1 cut(s) 422
MalI GATC 6 cut(s) 153, 161, 308, 959, 1261, 1283
MboI GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
MboII GAAGA 8 cut(s) 237, 269, 499, 502, 750, 1060, 1130, 1291
MflI RGATCY 2 cut(s) 151, 1281
MlsI TGGCCA 1 cut(s) 1307
MluCI AATT 3 cut(s) 136, 1041, 1074
MluNI TGGCCA 1 cut(s) 1307
MmeI TCCRAC 3 cut(s) 810, 875, 1022
MnlI CCTC 9 cut(s) 87, 120, 125, 180, 253, 414, 574, 1269, 1503
Mox20I TGGCCA 1 cut(s) 1307
MscI TGGCCA 1 cut(s) 1307
MslI CAYNNNNRTG 1 cut(s) 1395
Msp20I TGGCCA 1 cut(s) 1307
MspA1I CMGCKG 1 cut(s) 1439
MspR9I CCNGG 3 cut(s) 174, 219, 1500
MvaI CCWGG 3 cut(s) 174, 219, 1500
MwoI GCNNNNNNNGC 8 cut(s) 203, 452, 464, 881, 926, 1091, 1313, 1445
NdeII GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
NlaIV GGNNCC 5 cut(s) 153, 520, 996, 1326, 1490
NspI RCATGY 2 cut(s) 226, 483
NspV TTCGAA 1 cut(s) 1072
PfeI GAWTC 1 cut(s) 274
PkrI GCNGC 8 cut(s) 241, 263, 457, 578, 718, 874, 1290, 1315
PsiI TTATAA 1 cut(s) 587
Psp6I CCWGG 3 cut(s) 172, 217, 1498
PspFI CCCAGC 2 cut(s) 147, 1327
PspGI CCWGG 3 cut(s) 172, 217, 1498
PspN4I GGNNCC 5 cut(s) 153, 520, 996, 1326, 1490
PspPI GGNCC 2 cut(s) 1324, 1488
PstI CTGCAG 4 cut(s) 314, 718, 1027, 1318
PstNI CAGNNNCTG 3 cut(s) 147, 725, 814
PsuI RGATCY 2 cut(s) 151, 1281
PvuII CAGCTG 1 cut(s) 1439
RsaI GTAC 5 cut(s) 125, 182, 497, 712, 1211
RsaNI GTAC 5 cut(s) 124, 181, 496, 711, 1210
RseI CAYNNNNRTG 1 cut(s) 1395
SatI GCNGC 8 cut(s) 240, 262, 456, 577, 717, 873, 1289, 1314
Sau3AI GATC 6 cut(s) 151, 159, 306, 957, 1259, 1281
Sau96I GGNCC 2 cut(s) 1324, 1488
ScaI AGTACT 4 cut(s) 125, 497, 712, 1211
ScrFI CCNGG 3 cut(s) 174, 219, 1500
SfaNI GCATC 2 cut(s) 455, 549
SfcI CTRYAG 6 cut(s) 127, 310, 714, 1006, 1023, 1314
SfuI TTCGAA 1 cut(s) 1072
SinI GGWCC 2 cut(s) 1324, 1488
SmiMI CAYNNNNRTG 1 cut(s) 1395
SmlI CTYRAG 1 cut(s) 691
SmoI CTYRAG 1 cut(s) 691
Sse9I AATT 3 cut(s) 136, 1041, 1074
SsiI CCGC 5 cut(s) 302, 383, 458, 700, 1145
SspI AATATT 2 cut(s) 550, 592
SspMI CTAG 4 cut(s) 392, 914, 1217, 1257
StyD4I CCNGG 3 cut(s) 172, 217, 1498
StyI CCWWGG 3 cut(s) 522, 1080, 1302
TaaI ACNGT 5 cut(s) 123, 128, 680, 816, 1007
TaiI ACGT 1 cut(s) 425
TaqI TCGA 1 cut(s) 1072
TasI AATT 3 cut(s) 136, 1041, 1074
TatI WGTACW 5 cut(s) 123, 180, 495, 710, 1209
TfiI GAWTC 1 cut(s) 274
TscAI CASTG 8 cut(s) 274, 319, 511, 640, 685, 1315, 1341, 1490
TseI GCWGC 8 cut(s) 239, 261, 455, 576, 716, 872, 1288, 1313
TspDTI ATGAA 8 cut(s) 180, 804, 839, 1090, 1100, 1220, 1227, 1509
TspGWI ACGGA 1 cut(s) 1048
TspRI CASTG 8 cut(s) 274, 319, 511, 640, 685, 1315, 1341, 1490
VpaK11BI GGWCC 2 cut(s) 1324, 1488
XapI RAATTY 1 cut(s) 1074
XceI RCATGY 2 cut(s) 226, 483
XmiI GTMKAC 1 cut(s) 1433
XspI CTAG 4 cut(s) 392, 914, 1217, 1257
ZrmI AGTACT 4 cut(s) 125, 497, 712, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.