pycom04g11440
NAC Family

Dol-P-Glc Glc(2)Man(9)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
14300377 .. 14302892
2516 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g11440.3

Sequence Viewer

Length: 1524 bp
ATGAGTAGGATTGCCGTGGCCACGATTGTGAGCCTGTGGATAATTCCCATCTCCATCCTCGTCAATCACATTGTTCCCGAGCCCTACATGGATGAGATATTCCATGTACCTCAAGCTCAACAGTACTGTAATGGCAATTTCAGAAGCTGGGATCCCATGATCACCACTCCTCCTGGCCTGTACTATCTTTCACTAGCTCATGTTGCGTATTTGTTTCCAGGCATGTCATTGGTAAAAGCAGCCCTGTCGTTTTCTGAAGGCTGCTCCACAGCGATTCTTCGCTCTGTCAATGGTGTTTTGGCGGTATTTTGCAGCATTCTTGTGTATGAGATAATCATTCACTTGAGACCGGCTCTTGATGAAAGAAAAGCAACACTTTACACGGTGGTGCTAGCCATGTACCCGCTTCATTGGTTCTTCACTTTTCTCTATTATACAGATGTTGTGTCGCTTGTGGCAGTGCTCGCTATGCATCTTGCGTGTTTGAAGAAGAATTACTGGTTTAGTGCATTGCTTGGTGCTGTGGCAGTTGTTATTCGGCAAACAAATATTATATGGATGCTTTTTGTTTGTTGCAGCGAGGTTATAAATATTACAATGGCTGACCATAAAGATAAGATAGATGTAGACGACACAATTAGGATAAAAGGTCAGCCAACTCCTTCAAACACTGTTACGTTAGGCTCAAACTTGAGAAAGCGGAAGGCCAGCACTTCAGTGGATACGGGAACACATTTAATCTCGACTAGAAAAGTTTCTTATCAAACTTGCAAATTAGGTTTTCTTGATGAAATTAAGGCCATCTTTCCAAAATTATGGTACATGAAGTTGGAACTATTGTTTTCTTTTAGCCCTTTTATTCTAGTATTAGCAGCCTTTATTGCCTTTGTTCGGTGGAATGGGAGTGTGGTTCTGGGTGCAAAAGATGCTCATGCAGTTTCTCCGCATTTTGCACAGATCTTGTATTTTGGTCTATTTTCTGCCCTTGCTATGGCTCCTACACTCTTTAGTTTGAGACAAGTTGTAGATTTATTCCGGTCAATGTGGAAGAATAAGTTCCTAACCTTCTTTCAGATGTCTTTGGCACTCAGTGCTGCCTTCATCGCTGTCCATTTTTTCAGCATAGCTCATCCCTATCTTCTGGCTGACAATCGGCATTACCCTTTTTATCTTTGGCGGAAAGTCATCAAAGCTCATTGGTCAATGAAGTTCCTTCTAGTCCCACTTTATGTTTATTCATGGCTTTCCATCGTCACTAGATTGGGGAAATTTCAGAGGAAGATCTGGGTGCTGGCATTTTTCTTGGCTACTGCTGCAGTTTTGGTTCCCGCACCGCTGATTGAGTTTAGATATTATACTATTCCATTCTTTTTCTTGATCCTACATTCCCATACTGATGATTATCGAACTTGGCTCGTCATGGGGGTGCTGTACATAATCGTCAACGTCTTCACAATGATGATGTTCTTGTATCGACCATTCCATTGGTCCCATGAGCCAGGGACCCAACGGTTTATATGGTAG

Protein Analysis

508

Amino Acids

58.38

Weight (kDa)

9.48

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AccI GTMKAC 1 cut(s) 627
AciI CCGC 7 cut(s) 302, 404, 700, 944, 1177, 1329, 1334
AclWI GGATC 3 cut(s) 146, 159, 1372
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 1 cut(s) 1268
AcuI CTGAAG 2 cut(s) 276, 699
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 6 cut(s) 108, 125, 182, 401, 821, 1433
AfiI CCNNNNNNNGG 2 cut(s) 891, 991
AgsI TTSAA 2 cut(s) 487, 666
AjnI CCWGG 3 cut(s) 172, 217, 1498
AleI CACNNNNGTG 3 cut(s) 26, 386, 716
AluBI AGCT 5 cut(s) 116, 147, 197, 1127, 1193
AluI AGCT 5 cut(s) 116, 147, 197, 1127, 1193
Alw21I GWGCWC 1 cut(s) 465
Alw26I GTCTC 2 cut(s) 340, 1009
AlwI GGATC 3 cut(s) 146, 159, 1372
AlwNI CAGNNNCTG 1 cut(s) 147
Ama87I CYCGRG 1 cut(s) 77
AoxI GGCC 4 cut(s) 18, 175, 705, 798
ApeKI GCWGC 7 cut(s) 239, 261, 312, 576, 872, 1094, 1313
ApoI RAATTY 1 cut(s) 1268
Asp700I GAANNNNTTC 2 cut(s) 754, 1055
AspS9I GGNCC 2 cut(s) 1488, 1503
AsuHPI GGTGA 1 cut(s) 154
AsuNHI GCTAGC 1 cut(s) 391
AvaI CYCGRG 1 cut(s) 77
AvaII GGWCC 2 cut(s) 1488, 1503
BalI TGGCCA 1 cut(s) 20
BamHI GGATCC 1 cut(s) 151
BanII GRGCYC 1 cut(s) 84
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
BbsI GAAGAC 1 cut(s) 1441
Bbv12I GWGCWC 1 cut(s) 465
BbvI GCAGC 7 cut(s) 248, 251, 324, 588, 884, 1081, 1300
BccI CCATC 4 cut(s) 56, 62, 809, 1256
BcgI CGANNNNNNTGC 2 cut(s) 228, 262
BciT130I CCWGG 3 cut(s) 174, 219, 1500
BciVI GTATCC 1 cut(s) 715
BclI TGATCA 1 cut(s) 159
BcoDI GTCTC 2 cut(s) 340, 1009
BfaI CTAG 6 cut(s) 194, 392, 747, 863, 1217, 1257
BfmI CTRYAG 1 cut(s) 1314
BfuI GTATCC 1 cut(s) 715
BglII AGATCT 2 cut(s) 957, 1281
BisI GCNGC 7 cut(s) 240, 262, 313, 577, 873, 1095, 1314
BlsI GCNGC 7 cut(s) 241, 263, 314, 578, 874, 1096, 1315
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 3 cut(s) 174, 219, 1500
Bme18I GGWCC 2 cut(s) 1488, 1503
BmeT110I CYCGRG 1 cut(s) 77
BmgT120I GGNCC 2 cut(s) 1488, 1503
BmiI GGNNCC 6 cut(s) 153, 996, 1326, 1490, 1504, 1505
BmrFI CCNGG 3 cut(s) 174, 219, 1500
BmsI GCATC 3 cut(s) 481, 549, 916
BmtI GCTAGC 1 cut(s) 395
BpiI GAAGAC 1 cut(s) 1441
BplI GAGNNNNNCTC 2 cut(s) 337, 369
BpuEI CTTGAG 3 cut(s) 96, 364, 712
BsaBI GATNNNNATC 1 cut(s) 1401
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 2 cut(s) 15, 1499
BsaWI WCCGGW 1 cut(s) 1035
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bsc4I CCNNNNNNNGG 2 cut(s) 891, 991
Bse118I RCCGGY 1 cut(s) 349
Bse1I ACTGG 1 cut(s) 503
Bse3DI GCAATG 1 cut(s) 509
Bse8I GATNNNNATC 1 cut(s) 1401
BseBI CCWGG 3 cut(s) 174, 219, 1500
BseDI CCNNGG 2 cut(s) 15, 1499
BseGI GGATG 4 cut(s) 54, 97, 564, 1129
BseJI GATNNNNATC 1 cut(s) 1401
BseLI CCNNNNNNNGG 2 cut(s) 891, 991
BseMI GCAATG 1 cut(s) 509
BseMII CTCAG 1 cut(s) 1102
BseNI ACTGG 1 cut(s) 503
BseRI GAGGAG 1 cut(s) 159
BseXI GCAGC 7 cut(s) 248, 251, 324, 588, 884, 1081, 1300
BseYI CCCAGC 1 cut(s) 147
BshFI GGCC 4 cut(s) 20, 177, 707, 800
BsiHKAI GWGCWC 1 cut(s) 465
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 2 cut(s) 350, 1036
BslFI GGGAC 3 cut(s) 1205, 1474, 1516
BslI CCNNNNNNNGG 2 cut(s) 891, 991
BsmAI GTCTC 2 cut(s) 340, 1009
BsmFI GGGAC 3 cut(s) 1205, 1474, 1516
BsmI GAATGC 1 cut(s) 315
BsnI GGCC 4 cut(s) 20, 177, 707, 800
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 2 cut(s) 84, 465
Bsp1407I TGTACA 1 cut(s) 1431
Bsp143I GATC 5 cut(s) 151, 159, 957, 1281, 1377
BspACI CCGC 7 cut(s) 302, 404, 700, 944, 1177, 1329, 1334
BspANI GGCC 4 cut(s) 20, 177, 707, 800
BspCNI CTCAG 1 cut(s) 1101
BspLI GGNNCC 6 cut(s) 153, 996, 1326, 1490, 1504, 1505
BspMAI CTGCAG 1 cut(s) 1318
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 3 cut(s) 146, 159, 1372
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 1 cut(s) 509
BsrFI RCCGGY 1 cut(s) 349
BsrGI TGTACA 1 cut(s) 1431
BsrI ACTGG 1 cut(s) 503
BssAI RCCGGY 1 cut(s) 349
BssECI CCNNGG 2 cut(s) 15, 1499
BssMI GATC 5 cut(s) 151, 159, 957, 1281, 1377
Bst2UI CCWGG 3 cut(s) 174, 219, 1500
Bst4CI ACNGT 5 cut(s) 123, 128, 385, 673, 1512
BstAPI GCANNNNNTGC 2 cut(s) 926, 1091
BstAUI TGTACA 1 cut(s) 1431
BstC8I GCNNGC 4 cut(s) 393, 465, 709, 1293
BstDEI CTNAG 1 cut(s) 1088
BstDSI CCRYGG 1 cut(s) 15
BstF5I GGATG 4 cut(s) 54, 97, 564, 1129
BstKTI GATC 5 cut(s) 154, 162, 960, 1284, 1380
BstMAI GTCTC 2 cut(s) 340, 1009
BstMBI GATC 5 cut(s) 151, 159, 957, 1281, 1377
BstMWI GCNNNNNNNGC 8 cut(s) 203, 464, 469, 881, 926, 1091, 1103, 1313
BstNI CCWGG 3 cut(s) 174, 219, 1500
BstNSI RCATGY 1 cut(s) 226
BstSCI CCNGG 3 cut(s) 172, 217, 1498
BstSFI CTRYAG 1 cut(s) 1314
BstV1I GCAGC 7 cut(s) 248, 251, 324, 588, 884, 1081, 1300
BstV2I GAAGAC 1 cut(s) 1441
BstX2I RGATCY 3 cut(s) 151, 957, 1281
BstXI CCANNNNNNTGG 2 cut(s) 816, 1485
BstYI RGATCY 3 cut(s) 151, 957, 1281
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 4 cut(s) 20, 177, 707, 800
BtgI CCRYGG 1 cut(s) 15
BtgZI GCGATG 1 cut(s) 1087
BtsCI GGATG 4 cut(s) 54, 97, 564, 1129
BtsI GCAGTG 1 cut(s) 465
BtsIMutI CAGTG 4 cut(s) 465, 669, 723, 1096
Cac8I GCNNGC 4 cut(s) 393, 465, 709, 1293
CaiI CAGNNNCTG 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 349
Cfr13I GGNCC 2 cut(s) 1488, 1503
Csp6I GTAC 6 cut(s) 107, 124, 181, 400, 820, 1432
CviQI GTAC 6 cut(s) 107, 124, 181, 400, 820, 1432
DdeI CTNAG 1 cut(s) 1088
DpnI GATC 5 cut(s) 153, 161, 959, 1283, 1379
DpnII GATC 5 cut(s) 151, 159, 957, 1281, 1377
DraIII CACNNNGTG 1 cut(s) 1091
EaeI YGGCCR 1 cut(s) 18
EciI GGCGGA 1 cut(s) 1192
Eco24I GRGCYC 1 cut(s) 84
Eco31I GGTCTC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 1488, 1503
Eco57I CTGAAG 2 cut(s) 276, 699
Eco88I CYCGRG 1 cut(s) 77
EcoO109I RGGNCCY 1 cut(s) 1503
EcoRII CCWGG 3 cut(s) 172, 217, 1498
EcoT22I ATGCAT 1 cut(s) 474
EcoT38I GRGCYC 1 cut(s) 84
FalI AAGNNNNNCTT 4 cut(s) 360, 392, 788, 820
FaqI GGGAC 3 cut(s) 1205, 1474, 1516
FauI CCCGC 2 cut(s) 411, 1336
FbaI TGATCA 1 cut(s) 159
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 7 cut(s) 240, 262, 313, 577, 873, 1095, 1314
FokI GGATG 4 cut(s) 41, 104, 571, 1116
FriOI GRGCYC 1 cut(s) 84
Fsp4HI GCNGC 7 cut(s) 240, 262, 313, 577, 873, 1095, 1314
FspBI CTAG 6 cut(s) 194, 392, 747, 863, 1217, 1257
GluI GCNGC 7 cut(s) 240, 262, 313, 577, 873, 1095, 1314
GsaI CCCAGC 1 cut(s) 151
HaeIII GGCC 4 cut(s) 20, 177, 707, 800
HapII CCGG 2 cut(s) 350, 1036
HincII GTYRAC 1 cut(s) 1444
HindII GTYRAC 1 cut(s) 1444
HinfI GANTC 1 cut(s) 274
HpaII CCGG 2 cut(s) 350, 1036
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 2 cut(s) 628, 1444
Hpy188I TCNGA 4 cut(s) 143, 256, 1074, 1275
Hpy188III TCNNGA 5 cut(s) 77, 356, 742, 785, 1375
Hpy8I GTNNAC 2 cut(s) 628, 1444
HpyAV CCTTC 6 cut(s) 251, 672, 697, 1075, 1108, 1223
HpyCH4III ACNGT 5 cut(s) 123, 128, 385, 673, 1512
HpyCH4IV ACGT 2 cut(s) 677, 1446
HpyCH4V TGCA 9 cut(s) 312, 472, 509, 576, 771, 920, 935, 953, 1316
HpyF10VI GCNNNNNNNGC 8 cut(s) 203, 464, 469, 881, 926, 1091, 1103, 1313
HpyF3I CTNAG 1 cut(s) 1088
HpySE526I ACGT 2 cut(s) 677, 1446
KflI GGGWCCC 1 cut(s) 1503
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 5 cut(s) 151, 159, 957, 1281, 1377
LmnI GCTCC 2 cut(s) 269, 1000
Lsp1109I GCAGC 7 cut(s) 248, 251, 324, 588, 884, 1081, 1300
LweI GCATC 3 cut(s) 481, 549, 916
MaeI CTAG 6 cut(s) 194, 392, 747, 863, 1217, 1257
MaeII ACGT 2 cut(s) 677, 1446
MaeIII GTNAC 2 cut(s) 673, 1252
MalI GATC 5 cut(s) 153, 161, 959, 1283, 1379
MboI GATC 5 cut(s) 151, 159, 957, 1281, 1377
MboII GAAGA 8 cut(s) 269, 409, 499, 502, 1060, 1130, 1291, 1441
MflI RGATCY 3 cut(s) 151, 957, 1281
MhlI GDGCHC 2 cut(s) 84, 465
MlsI TGGCCA 1 cut(s) 20
MluCI AATT 8 cut(s) 42, 136, 493, 636, 773, 792, 812, 1268
MluNI TGGCCA 1 cut(s) 20
MmeI TCCRAC 1 cut(s) 810
MnlI CCTC 5 cut(s) 68, 120, 180, 574, 1269
Mox20I TGGCCA 1 cut(s) 20
Mph1103I ATGCAT 1 cut(s) 474
MroXI GAANNNNTTC 2 cut(s) 754, 1055
MscI TGGCCA 1 cut(s) 20
MseI TTAA 2 cut(s) 737, 795
MslI CAYNNNNRTG 7 cut(s) 26, 320, 386, 716, 1395, 1424, 1457
Msp20I TGGCCA 1 cut(s) 20
MspA1I CMGCKG 1 cut(s) 1336
MspI CCGG 2 cut(s) 350, 1036
MspR9I CCNGG 3 cut(s) 174, 219, 1500
Mva1269I GAATGC 1 cut(s) 315
MvaI CCWGG 3 cut(s) 174, 219, 1500
MwoI GCNNNNNNNGC 8 cut(s) 203, 464, 469, 881, 926, 1091, 1103, 1313
NdeII GATC 5 cut(s) 151, 159, 957, 1281, 1377
NheI GCTAGC 1 cut(s) 391
NlaIV GGNNCC 6 cut(s) 153, 996, 1326, 1490, 1504, 1505
NmuCI GTSAC 1 cut(s) 1252
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 226
OliI CACNNNNGTG 3 cut(s) 26, 386, 716
PctI GAATGC 1 cut(s) 315
PdmI GAANNNNTTC 2 cut(s) 754, 1055
PfeI GAWTC 1 cut(s) 274
PkrI GCNGC 7 cut(s) 241, 263, 314, 578, 874, 1096, 1315
PpuMI RGGWCCY 1 cut(s) 1503
PsiI TTATAA 1 cut(s) 587
Psp5II RGGWCCY 1 cut(s) 1503
Psp6I CCWGG 3 cut(s) 172, 217, 1498
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 3 cut(s) 172, 217, 1498
PspN4I GGNNCC 6 cut(s) 153, 996, 1326, 1490, 1504, 1505
PspPI GGNCC 2 cut(s) 1488, 1503
PspPPI RGGWCCY 1 cut(s) 1503
PstI CTGCAG 1 cut(s) 1318
PstNI CAGNNNCTG 1 cut(s) 147
PsuI RGATCY 3 cut(s) 151, 957, 1281
RsaI GTAC 6 cut(s) 108, 125, 182, 401, 821, 1433
RsaNI GTAC 6 cut(s) 107, 124, 181, 400, 820, 1432
RseI CAYNNNNRTG 7 cut(s) 26, 320, 386, 716, 1395, 1424, 1457
SaqAI TTAA 2 cut(s) 737, 795
SatI GCNGC 7 cut(s) 240, 262, 313, 577, 873, 1095, 1314
Sau3AI GATC 5 cut(s) 151, 159, 957, 1281, 1377
Sau96I GGNCC 2 cut(s) 1488, 1503
ScaI AGTACT 1 cut(s) 125
ScrFI CCNGG 3 cut(s) 174, 219, 1500
SduI GDGCHC 2 cut(s) 84, 465
SfaNI GCATC 3 cut(s) 481, 549, 916
SfcI CTRYAG 1 cut(s) 1314
SinI GGWCC 2 cut(s) 1488, 1503
SmiMI CAYNNNNRTG 7 cut(s) 26, 320, 386, 716, 1395, 1424, 1457
SmlI CTYRAG 3 cut(s) 111, 343, 691
SmoI CTYRAG 3 cut(s) 111, 343, 691
Sse9I AATT 8 cut(s) 42, 136, 493, 636, 773, 792, 812, 1268
SsiI CCGC 7 cut(s) 302, 404, 700, 944, 1177, 1329, 1334
SspI AATATT 2 cut(s) 550, 592
SspMI CTAG 6 cut(s) 194, 392, 747, 863, 1217, 1257
StyD4I CCNGG 3 cut(s) 172, 217, 1498
TaaI ACNGT 5 cut(s) 123, 128, 385, 673, 1512
TaiI ACGT 2 cut(s) 680, 1449
TaqI TCGA 3 cut(s) 743, 1405, 1474
TasI AATT 8 cut(s) 42, 136, 493, 636, 773, 792, 812, 1268
TatI WGTACW 3 cut(s) 123, 180, 1431
TfiI GAWTC 1 cut(s) 274
Tru1I TTAA 2 cut(s) 737, 795
Tru9I TTAA 2 cut(s) 737, 795
TscAI CASTG 4 cut(s) 465, 676, 723, 1096
TseFI GTSAC 1 cut(s) 1252
TseI GCWGC 7 cut(s) 239, 261, 312, 576, 872, 1094, 1313
Tsp45I GTSAC 1 cut(s) 1252
TspDTI ATGAA 7 cut(s) 375, 398, 804, 839, 1090, 1220, 1227
TspRI CASTG 4 cut(s) 465, 676, 723, 1096
VpaK11BI GGWCC 2 cut(s) 1488, 1503
XapI RAATTY 1 cut(s) 1268
XceI RCATGY 1 cut(s) 226
XcmI CCANNNNNNNNNTGG 1 cut(s) 715
XmiI GTMKAC 1 cut(s) 627
XmnI GAANNNNTTC 2 cut(s) 754, 1055
XspI CTAG 6 cut(s) 194, 392, 747, 863, 1217, 1257
ZrmI AGTACT 1 cut(s) 125
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.