MD04G1127500.v1.1
NAC Family

Dol-P-Glc Glc(2)Man(9)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
21339498 .. 21342272
2775 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1127500.v1.1.491

Sequence Viewer

Length: 1515 bp
ATGGGTAGGATTACTGTGGCGACGATTGTGAGCCTGTGGGTAATTCCCATCTCCATCCTCGTCAATCACATTGTTCCCGAGCCCTACATGGATGAGATATTCCATGTGCCTCAAGCTCAACAGTACTGTAATGGCAATTTCAGAAGCTGGGATCCCATGATCACCACTCCTCCTGGCCTGTACTATCTTTCACTAGCTCATGTTGCGTATTTGTTTCCAGGCATGTCATTGGTAAAAGCAGACCATTCGTTTTCTGAAGGCTGCTCCACAGCGATTCTTCGCTCTGTCAATGGTGTTTTGGCTGTATTTTGCAGCGTTCTTGTGTATGAGATAATCATTCACTTGAGACCGGCTCTTGATGAAAGAAGAGCAACACTTTACGCGGTGGTGCTAGCCATGTACCCTCTTCATTGGTTCTTCACTTTTCTCTATTATACAGATGTTGTGTCGCTTGCGGCAGTGCTCGCTATGCATCTAGCGTGTTTGAAGAAGAAGTACTGGTTTAGTGCATTGCTTGGTGCTGTGGCAGTTGTTATTCGGCAAACAAATATTATATGGATGCTTTTTGTTTGTTGCAATGAGGTTATAAATATTACAATGGCTGACCATAAAGATAAGATAGACACAATTAGGATAAAAGGTCAGCCAACTCCTTCAAACACTGTTACTTTAGGCCCAAACTTGAGAAAGCGGAAGGCCAGCACTTCAGTGGATGCTGGAACTCATTTAATCTCGACTAGAAAAATTTCTCTTCAAACTTGCAAATTAGGTTTTCTTGATGAAATTAAGGCCATCTTTCCAAAATTATGGCACATGAAGTTGGAACTTTTGTTTTCTTTTAGCCCTTTTATTCTAGTATTAGCAGCCTTTGTTGCCCTTGTTCGGTGGAATGGGAGTGTGGTTCTAGGTGCAAAAGATGCTCATGCCGTTTCTCCTCATTTTGCACAGATCTTGTATTTTGGTCTATTTTCTGCCCTTGCTATGGCTCCTACACTCTTTAGTTTGAGACAAACGGTACACTTATTCTGGTCAATGTGGAAGAATAAGTTCCTTACCTTCTTTCAGATGTCTTTGGCACTCATTGCTGGCTTCATCGCTGTCCATTTTTTCAGCATAGCTCATCCCTATCTTCTGGCTGACAATCGGCATTATCCCTTTTATCTTTGGCGGAAGGTCATCAAAGCTCATTGGTCAATGAAGTACCTCCTCATCCCACTTTATGTTTATTCATGGCTTTCCATCATCACTAGATTGGGGAAATTTCAGAGGAAGATTTGGGTGCTGGCATTTGTCTTGGCTACTGCTGCAGTTTTGGTTCCCGCACCGCTGATTGAGTTTAGATATTGTACCATTCCATTCTTTTTCTTGATCCTACATTCCCACGCTGACGATTATCGAAGTTGGCTCGTCACGGGGCTACTGTACATAACTGTCAACATATACACAATGATGATGTTCTTGTATCGACCATTCCATTGGTCCCATGAGCCAGGGACCCAGCGGTTTATATGGTAG

Protein Analysis

505

Amino Acids

57.93

Weight (kDa)

9.55

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIE2_ALG10 PF04922 25 - 457 5.7e-124 DIE2/ALG10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AccII CGCG 1 cut(s) 383
AciI CCGC 7 cut(s) 383, 455, 691, 1168, 1320, 1325, 1501
AclWI GGATC 3 cut(s) 146, 159, 1363
AcsI RAATTY 2 cut(s) 744, 1259
AcuI CTGAAG 2 cut(s) 276, 690
AfaI GTAC 8 cut(s) 125, 182, 401, 497, 1017, 1202, 1348, 1424
AfiI CCNNNNNNNGG 2 cut(s) 882, 982
AgsI TTSAA 3 cut(s) 487, 657, 755
AjnI CCWGG 3 cut(s) 172, 217, 1489
AleI CACNNNNGTG 1 cut(s) 707
AluBI AGCT 5 cut(s) 116, 147, 197, 1118, 1184
AluI AGCT 5 cut(s) 116, 147, 197, 1118, 1184
Alw21I GWGCWC 1 cut(s) 465
Alw26I GTCTC 2 cut(s) 340, 1000
AlwI GGATC 3 cut(s) 146, 159, 1363
AlwNI CAGNNNCTG 1 cut(s) 147
Ama87I CYCGRG 1 cut(s) 77
AoxI GGCC 4 cut(s) 175, 673, 696, 789
ApeKI GCWGC 4 cut(s) 261, 312, 863, 1304
ApoI RAATTY 2 cut(s) 744, 1259
Asp700I GAANNNNTTC 2 cut(s) 745, 1046
AspS9I GGNCC 3 cut(s) 674, 1479, 1494
AsuHPI GGTGA 1 cut(s) 154
AsuNHI GCTAGC 1 cut(s) 391
AvaI CYCGRG 1 cut(s) 77
AvaII GGWCC 2 cut(s) 1479, 1494
BamHI GGATCC 1 cut(s) 151
BanII GRGCYC 1 cut(s) 84
BarI GAAGNNNNNNTAC 2 cut(s) 479, 511
Bbv12I GWGCWC 1 cut(s) 465
BbvI GCAGC 4 cut(s) 248, 324, 875, 1291
BccI CCATC 4 cut(s) 56, 62, 800, 1247
BceAI ACGGC 1 cut(s) 911
BcgI CGANNNNNNTGC 2 cut(s) 228, 262
BciT130I CCWGG 3 cut(s) 174, 219, 1491
BclI TGATCA 1 cut(s) 159
BcoDI GTCTC 2 cut(s) 340, 1000
BfaI CTAG 7 cut(s) 194, 392, 476, 738, 854, 905, 1248
BfmI CTRYAG 1 cut(s) 1305
BglII AGATCT 1 cut(s) 948
BisI GCNGC 5 cut(s) 262, 313, 456, 864, 1305
BlsI GCNGC 5 cut(s) 263, 314, 457, 865, 1306
BmcAI AGTACT 2 cut(s) 125, 497
Bme1390I CCNGG 3 cut(s) 174, 219, 1491
Bme18I GGWCC 2 cut(s) 1479, 1494
BmeT110I CYCGRG 1 cut(s) 77
BmgT120I GGNCC 3 cut(s) 674, 1479, 1494
BmiI GGNNCC 6 cut(s) 153, 987, 1317, 1481, 1495, 1496
BmrFI CCNGG 3 cut(s) 174, 219, 1491
BmsI GCATC 4 cut(s) 481, 549, 703, 907
BmtI GCTAGC 1 cut(s) 395
BplI GAGNNNNNCTC 2 cut(s) 337, 369
BpuEI CTTGAG 3 cut(s) 96, 364, 703
BsaI GGTCTC 1 cut(s) 340
BsaJI CCNNGG 1 cut(s) 1490
BsaXI ACNNNNNCTCC 2 cut(s) 154, 184
Bsc4I CCNNNNNNNGG 2 cut(s) 882, 982
Bse118I RCCGGY 1 cut(s) 349
Bse1I ACTGG 1 cut(s) 503
Bse3DI GCAATG 3 cut(s) 509, 583, 1080
BseBI CCWGG 3 cut(s) 174, 219, 1491
BseDI CCNNGG 1 cut(s) 1490
BseGI GGATG 6 cut(s) 54, 97, 564, 718, 1120, 1209
BseLI CCNNNNNNNGG 2 cut(s) 882, 982
BseMI GCAATG 3 cut(s) 509, 583, 1080
BseNI ACTGG 1 cut(s) 503
BseRI GAGGAG 3 cut(s) 159, 924, 1196
BseXI GCAGC 4 cut(s) 248, 324, 875, 1291
BseYI CCCAGC 2 cut(s) 147, 1497
Bsh1236I CGCG 1 cut(s) 383
BshFI GGCC 4 cut(s) 177, 675, 698, 791
BsiHKAI GWGCWC 1 cut(s) 465
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 1 cut(s) 350
BslFI GGGAC 2 cut(s) 1465, 1507
BslI CCNNNNNNNGG 2 cut(s) 882, 982
BsmAI GTCTC 2 cut(s) 340, 1000
BsmFI GGGAC 2 cut(s) 1465, 1507
BsnI GGCC 4 cut(s) 177, 675, 698, 791
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 2 cut(s) 84, 465
Bsp1407I TGTACA 1 cut(s) 1422
Bsp143I GATC 4 cut(s) 151, 159, 948, 1368
BspACI CCGC 7 cut(s) 383, 455, 691, 1168, 1320, 1325, 1501
BspANI GGCC 4 cut(s) 177, 675, 698, 791
BspFNI CGCG 1 cut(s) 383
BspLI GGNNCC 6 cut(s) 153, 987, 1317, 1481, 1495, 1496
BspMAI CTGCAG 1 cut(s) 1309
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 3 cut(s) 146, 159, 1363
BspQI GCTCTTC 1 cut(s) 361
BspTNI GGTCTC 1 cut(s) 340
BsrDI GCAATG 3 cut(s) 509, 583, 1080
BsrFI RCCGGY 1 cut(s) 349
BsrGI TGTACA 1 cut(s) 1422
BsrI ACTGG 1 cut(s) 503
BssAI RCCGGY 1 cut(s) 349
BssECI CCNNGG 1 cut(s) 1490
BssMI GATC 4 cut(s) 151, 159, 948, 1368
Bst2UI CCWGG 3 cut(s) 174, 219, 1491
Bst4CI ACNGT 7 cut(s) 16, 123, 128, 664, 1015, 1422, 1432
Bst6I CTCTTC 3 cut(s) 361, 411, 756
BstAPI GCANNNNNTGC 2 cut(s) 917, 1082
BstAUI TGTACA 1 cut(s) 1422
BstC8I GCNNGC 6 cut(s) 393, 453, 465, 700, 1087, 1284
BstF5I GGATG 6 cut(s) 54, 97, 564, 718, 1120, 1209
BstFNI CGCG 1 cut(s) 383
BstKTI GATC 4 cut(s) 154, 162, 951, 1371
BstMAI GTCTC 2 cut(s) 340, 1000
BstMBI GATC 4 cut(s) 151, 159, 948, 1368
BstMWI GCNNNNNNNGC 7 cut(s) 203, 464, 469, 872, 917, 1082, 1304
BstNI CCWGG 3 cut(s) 174, 219, 1491
BstNSI RCATGY 1 cut(s) 226
BstSCI CCNGG 3 cut(s) 172, 217, 1489
BstSFI CTRYAG 1 cut(s) 1305
BstUI CGCG 1 cut(s) 383
BstV1I GCAGC 4 cut(s) 248, 324, 875, 1291
BstX2I RGATCY 2 cut(s) 151, 948
BstXI CCANNNNNNTGG 2 cut(s) 807, 1476
BstYI RGATCY 2 cut(s) 151, 948
BsuRI GGCC 4 cut(s) 177, 675, 698, 791
BtgZI GCGATG 1 cut(s) 1078
BtsCI GGATG 6 cut(s) 54, 97, 564, 718, 1120, 1209
BtsI GCAGTG 1 cut(s) 465
BtsIMutI CAGTG 3 cut(s) 465, 660, 714
Cac8I GCNNGC 6 cut(s) 393, 453, 465, 700, 1087, 1284
CaiI CAGNNNCTG 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 349
Cfr13I GGNCC 3 cut(s) 674, 1479, 1494
Csp6I GTAC 8 cut(s) 124, 181, 400, 496, 1016, 1201, 1347, 1423
CviQI GTAC 8 cut(s) 124, 181, 400, 496, 1016, 1201, 1347, 1423
DpnI GATC 4 cut(s) 153, 161, 950, 1370
DpnII GATC 4 cut(s) 151, 159, 948, 1368
Eam1104I CTCTTC 3 cut(s) 361, 411, 756
EarI CTCTTC 3 cut(s) 361, 411, 756
EciI GGCGGA 1 cut(s) 1183
Eco24I GRGCYC 1 cut(s) 84
Eco31I GGTCTC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 1479, 1494
Eco57I CTGAAG 2 cut(s) 276, 690
Eco88I CYCGRG 1 cut(s) 77
EcoO109I RGGNCCY 1 cut(s) 1494
EcoRII CCWGG 3 cut(s) 172, 217, 1489
EcoT22I ATGCAT 1 cut(s) 474
EcoT38I GRGCYC 1 cut(s) 84
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FaqI GGGAC 2 cut(s) 1465, 1507
FauI CCCGC 1 cut(s) 1327
FbaI TGATCA 1 cut(s) 159
Fnu4HI GCNGC 5 cut(s) 262, 313, 456, 864, 1305
FokI GGATG 6 cut(s) 41, 104, 571, 725, 1107, 1196
FriOI GRGCYC 1 cut(s) 84
Fsp4HI GCNGC 5 cut(s) 262, 313, 456, 864, 1305
FspBI CTAG 7 cut(s) 194, 392, 476, 738, 854, 905, 1248
GluI GCNGC 5 cut(s) 262, 313, 456, 864, 1305
GsaI CCCAGC 2 cut(s) 151, 1501
HaeIII GGCC 4 cut(s) 177, 675, 698, 791
HapII CCGG 1 cut(s) 350
HincII GTYRAC 1 cut(s) 1435
HindII GTYRAC 1 cut(s) 1435
HinfI GANTC 1 cut(s) 274
HpaII CCGG 1 cut(s) 350
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 2 cut(s) 1018, 1435
Hpy188I TCNGA 4 cut(s) 143, 256, 1065, 1266
Hpy188III TCNNGA 5 cut(s) 77, 356, 733, 776, 1366
Hpy8I GTNNAC 2 cut(s) 1018, 1435
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 5 cut(s) 251, 663, 688, 1066, 1165
HpyCH4III ACNGT 7 cut(s) 16, 123, 128, 664, 1015, 1422, 1432
HpyCH4V TGCA 8 cut(s) 312, 472, 509, 576, 762, 911, 944, 1307
HpyF10VI GCNNNNNNNGC 7 cut(s) 203, 464, 469, 872, 917, 1082, 1304
KflI GGGWCCC 1 cut(s) 1494
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 4 cut(s) 151, 159, 948, 1368
LguI GCTCTTC 1 cut(s) 361
LmnI GCTCC 2 cut(s) 269, 991
Lsp1109I GCAGC 4 cut(s) 248, 324, 875, 1291
LweI GCATC 4 cut(s) 481, 549, 703, 907
MaeI CTAG 7 cut(s) 194, 392, 476, 738, 854, 905, 1248
MaeIII GTNAC 2 cut(s) 664, 1408
MalI GATC 4 cut(s) 153, 161, 950, 1370
MboI GATC 4 cut(s) 151, 159, 948, 1368
MflI RGATCY 2 cut(s) 151, 948
MhlI GDGCHC 2 cut(s) 84, 465
MluCI AATT 8 cut(s) 42, 136, 627, 744, 764, 783, 803, 1259
MmeI TCCRAC 1 cut(s) 801
MnlI CCTC 9 cut(s) 68, 120, 180, 414, 574, 945, 1214, 1217, 1260
Mph1103I ATGCAT 1 cut(s) 474
MroXI GAANNNNTTC 2 cut(s) 745, 1046
MseI TTAA 2 cut(s) 728, 786
MslI CAYNNNNRTG 2 cut(s) 707, 1448
MspA1I CMGCKG 2 cut(s) 1327, 1501
MspI CCGG 1 cut(s) 350
MspR9I CCNGG 3 cut(s) 174, 219, 1491
MvaI CCWGG 3 cut(s) 174, 219, 1491
MvnI CGCG 1 cut(s) 383
MwoI GCNNNNNNNGC 7 cut(s) 203, 464, 469, 872, 917, 1082, 1304
NdeII GATC 4 cut(s) 151, 159, 948, 1368
NheI GCTAGC 1 cut(s) 391
NlaIV GGNNCC 6 cut(s) 153, 987, 1317, 1481, 1495, 1496
NmuCI GTSAC 1 cut(s) 1408
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 226
OliI CACNNNNGTG 1 cut(s) 707
PciSI GCTCTTC 1 cut(s) 361
PdmI GAANNNNTTC 2 cut(s) 745, 1046
PfeI GAWTC 1 cut(s) 274
PkrI GCNGC 5 cut(s) 263, 314, 457, 865, 1306
PpuMI RGGWCCY 1 cut(s) 1494
PsiI TTATAA 1 cut(s) 587
Psp5II RGGWCCY 1 cut(s) 1494
Psp6I CCWGG 3 cut(s) 172, 217, 1489
PspFI CCCAGC 2 cut(s) 147, 1497
PspGI CCWGG 3 cut(s) 172, 217, 1489
PspN4I GGNNCC 6 cut(s) 153, 987, 1317, 1481, 1495, 1496
PspPI GGNCC 3 cut(s) 674, 1479, 1494
PspPPI RGGWCCY 1 cut(s) 1494
PstI CTGCAG 1 cut(s) 1309
PstNI CAGNNNCTG 1 cut(s) 147
PsuI RGATCY 2 cut(s) 151, 948
RsaI GTAC 8 cut(s) 125, 182, 401, 497, 1017, 1202, 1348, 1424
RsaNI GTAC 8 cut(s) 124, 181, 400, 496, 1016, 1201, 1347, 1423
RseI CAYNNNNRTG 2 cut(s) 707, 1448
SapI GCTCTTC 1 cut(s) 361
SaqAI TTAA 2 cut(s) 728, 786
SatI GCNGC 5 cut(s) 262, 313, 456, 864, 1305
Sau3AI GATC 4 cut(s) 151, 159, 948, 1368
Sau96I GGNCC 3 cut(s) 674, 1479, 1494
ScaI AGTACT 2 cut(s) 125, 497
ScrFI CCNGG 3 cut(s) 174, 219, 1491
SduI GDGCHC 2 cut(s) 84, 465
SfaNI GCATC 4 cut(s) 481, 549, 703, 907
SfcI CTRYAG 1 cut(s) 1305
SinI GGWCC 2 cut(s) 1479, 1494
SmiMI CAYNNNNRTG 2 cut(s) 707, 1448
SmlI CTYRAG 3 cut(s) 111, 343, 682
SmoI CTYRAG 3 cut(s) 111, 343, 682
Sse9I AATT 8 cut(s) 42, 136, 627, 744, 764, 783, 803, 1259
SsiI CCGC 7 cut(s) 383, 455, 691, 1168, 1320, 1325, 1501
SspI AATATT 2 cut(s) 550, 592
SspMI CTAG 7 cut(s) 194, 392, 476, 738, 854, 905, 1248
StyD4I CCNGG 3 cut(s) 172, 217, 1489
TaaI ACNGT 7 cut(s) 16, 123, 128, 664, 1015, 1422, 1432
TaqI TCGA 3 cut(s) 734, 1396, 1465
TasI AATT 8 cut(s) 42, 136, 627, 744, 764, 783, 803, 1259
TatI WGTACW 4 cut(s) 123, 180, 495, 1422
TauI GCSGC 1 cut(s) 458
TfiI GAWTC 1 cut(s) 274
Tru1I TTAA 2 cut(s) 728, 786
Tru9I TTAA 2 cut(s) 728, 786
TscAI CASTG 3 cut(s) 465, 667, 714
TseFI GTSAC 1 cut(s) 1408
TseI GCWGC 4 cut(s) 261, 312, 863, 1304
Tsp45I GTSAC 1 cut(s) 1408
TspDTI ATGAA 7 cut(s) 375, 398, 795, 830, 1081, 1211, 1218
TspRI CASTG 3 cut(s) 465, 667, 714
VpaK11BI GGWCC 2 cut(s) 1479, 1494
XapI RAATTY 2 cut(s) 744, 1259
XceI RCATGY 1 cut(s) 226
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XmnI GAANNNNTTC 2 cut(s) 745, 1046
XspI CTAG 7 cut(s) 194, 392, 476, 738, 854, 905, 1248
ZrmI AGTACT 2 cut(s) 125, 497
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.