MD12G1140900.v1.1
NAC Family

Dol-P-Glc Glc(2)Man(9)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
21892254 .. 21895266
3013 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1140900.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGGAACCAAACAGACCCTTTGGATTTGATTCTGAACAGCAGAGAAATATGGGTAGGATTGCCGTAGCCGCGATTGTGAGCCTGTGGGTAATTCCCATCTCCATCCTCGTCAGTCACATTGTTCCCGAACCCTACATGGATGAGATATTCCATGTGCCTCAAGCACAACAGTACTGCAATGGCAATTTCAGAAGCTGGGATCCCATGATCACCACTCCTCCTGGCCTGTACTATCTTTCACTAGCTCATGTTGCGTATTTGTTTCCAGGCATGTCAGTCGTAAAAGCGGCCACGTCGTTTTCTGAAGGCTGCTCCACAGCCATTCTTCGCTCTTTCAATGGTGTTTTGGCGGTATTTTGCAGCGTTATTGTGTATGACATAATCATTCACTTGAGACCGGCTCTTGATGAAAGAAAAGCAACACTTTATGCGGTGGTGCTAGCCATTTACCCGCTTCATTGGTTCTTCAGTTTTCTCTATTATACAGATGTTGCGTCACTTGCTGCAGTGCTTGCTATGCATCTTGCGTGTTTGAAGAAGAAGTACTGGTTTAGTGCATTGCTTGGTTCCGTGGCAGTTGTTATTCGGCAAACAAATATTATATGGATGCTTTTTGTTTGTTGCAGTGAGGTTATAAATATTACAATGGCTGACCATAAAGATAAGATATATATAGACGACACAATTAGGATAAAAGGTCAGCCAACTCCTTCAAACAGTTTTACTTTAGGCTCAAACTTGAGAAAGCGGAAGGCAACCACTGTAGTGGATACTGGAAGACATTTAATCTCGACTAGAAAAGTTTCTTTTCAAACTTGCAAATTAGGTTTTCTTGATGAAATTGAGGCAATCTTTCCAAACTTATGGCACATGAAGTTGGAACTTTTGGTTTCTTTTAGCCCTTTTATTCTAGTATTAGCAGCCTTTATTGCCTTTGTTCGGTGGAATGGGAGTGTGGTTCTAGGTGCAAAAGATGCTCATGCAGTTTCTCCACATTTTGCACAGATCATGTATTTTGGTCTGTTTTCTGCCCTTGCTATGGCTCCTATGCTCTTTAGCTTGAGTCAAACTGTAGATTTATTCCGGTCAATGTGGAAGAACAAGTTCCTTACCTTCATTCAGATATCTTTGGCACTTGGCGCTGGCTTCATCGCAGTCCATTTTTTCAGCATAGCTCATCCCTATCTTCTGGCTGACAATCGGCATTATCCTTTTTATCTTTGGCGGAAGGTCATCAAAGCTCATTGGTCAATGAAGTACCTCCTAGTCCCACTTTATGTTTATTCATGGATTTCCATCGTCACTAGATTGGGGAAGTTTCAGAGGAAGATCTGGGTGCTGGCATTTTTCTTGGCTACTGCTGCAGTTTTGGTTCCCGCACCGCTGATTGAGTTTAGATATTATACCATTCCATTCTTTTTCTTGATCCTACATTCCCAGACTGATGATTATCGAACTTGGCTCTTCGTGGGGGTGCTGTACATAACCGTCAACGTCTTCACAATGATGATGTTCTTGTATCGACCATTCCATTGGTCCCATGAGCCAGGGACCCAACGGTTTATATGGTAG

Protein Analysis

524

Amino Acids

60.08

Weight (kDa)

9.4

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIE2_ALG10 PF04922 41 - 476 1.4e-126 DIE2/ALG10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 635
AccII CGCG 1 cut(s) 71
AciI CCGC 9 cut(s) 69, 287, 350, 431, 452, 748, 1225, 1377, 1382
AclWI GGATC 3 cut(s) 194, 207, 1420
AcoI YGGCCR 1 cut(s) 288
AcuI CTGAAG 2 cut(s) 324, 451
AfaI GTAC 5 cut(s) 173, 230, 545, 1259, 1481
AfiI CCNNNNNNNGG 2 cut(s) 939, 1039
AgsI TTSAA 4 cut(s) 337, 535, 714, 812
AjiI CACGTC 1 cut(s) 294
AjnI CCWGG 3 cut(s) 220, 265, 1546
AleI CACNNNNGTG 1 cut(s) 764
AluBI AGCT 5 cut(s) 195, 245, 1059, 1175, 1241
AluI AGCT 5 cut(s) 195, 245, 1059, 1175, 1241
Alw26I GTCTC 1 cut(s) 388
AlwI GGATC 3 cut(s) 194, 207, 1420
AlwNI CAGNNNCTG 1 cut(s) 195
AoxI GGCC 2 cut(s) 223, 288
ApeKI GCWGC 5 cut(s) 309, 360, 503, 920, 1361
Asp700I GAANNNNTTC 2 cut(s) 802, 1103
AspLEI GCGC 1 cut(s) 1142
AspS9I GGNCC 2 cut(s) 1536, 1551
AsuHPI GGTGA 1 cut(s) 202
AsuNHI GCTAGC 1 cut(s) 439
AvaII GGWCC 2 cut(s) 1536, 1551
BamHI GGATCC 1 cut(s) 199
BarI GAAGNNNNNNTAC 2 cut(s) 527, 559
BbsI GAAGAC 2 cut(s) 784, 1489
BbvI GCAGC 5 cut(s) 296, 372, 490, 932, 1348
BccI CCATC 3 cut(s) 104, 110, 1304
BceAI ACGGC 1 cut(s) 47
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 3 cut(s) 222, 267, 1548
BciVI GTATCC 1 cut(s) 763
BclI TGATCA 1 cut(s) 207
BcoDI GTCTC 1 cut(s) 388
BfaI CTAG 7 cut(s) 242, 440, 795, 911, 962, 1265, 1305
BfmI CTRYAG 4 cut(s) 504, 762, 1071, 1362
BfoI RGCGCY 1 cut(s) 1143
BfuI GTATCC 1 cut(s) 763
BglII AGATCT 1 cut(s) 1329
BisI GCNGC 7 cut(s) 69, 288, 310, 361, 504, 921, 1362
BlsI GCNGC 7 cut(s) 70, 289, 311, 362, 505, 922, 1363
BmcAI AGTACT 2 cut(s) 173, 545
Bme1390I CCNGG 3 cut(s) 222, 267, 1548
Bme18I GGWCC 2 cut(s) 1536, 1551
BmgBI CACGTC 1 cut(s) 294
BmgT120I GGNCC 2 cut(s) 1536, 1551
BmiI GGNNCC 8 cut(s) 6, 201, 568, 1044, 1374, 1538, 1552, 1553
BmrFI CCNGG 3 cut(s) 222, 267, 1548
BmsI GCATC 3 cut(s) 529, 597, 964
BmtI GCTAGC 1 cut(s) 443
BpiI GAAGAC 2 cut(s) 784, 1489
BplI GAGNNNNNCTC 2 cut(s) 385, 417
BpuEI CTTGAG 4 cut(s) 144, 412, 760, 1081
BsaBI GATNNNNATC 2 cut(s) 1295, 1449
BsaI GGTCTC 1 cut(s) 388
BsaJI CCNNGG 2 cut(s) 570, 1547
BsaWI WCCGGW 1 cut(s) 1083
BsaXI ACNNNNNCTCC 2 cut(s) 202, 232
Bsc4I CCNNNNNNNGG 2 cut(s) 939, 1039
Bse118I RCCGGY 1 cut(s) 397
Bse1I ACTGG 2 cut(s) 551, 778
Bse3DI GCAATG 2 cut(s) 184, 557
Bse8I GATNNNNATC 2 cut(s) 1295, 1449
BseBI CCWGG 3 cut(s) 222, 267, 1548
BseDI CCNNGG 2 cut(s) 570, 1547
BseGI GGATG 4 cut(s) 102, 145, 612, 1177
BseJI GATNNNNATC 2 cut(s) 1295, 1449
BseLI CCNNNNNNNGG 2 cut(s) 939, 1039
BseMI GCAATG 2 cut(s) 184, 557
BseNI ACTGG 2 cut(s) 551, 778
BseRI GAGGAG 1 cut(s) 207
BseXI GCAGC 5 cut(s) 296, 372, 490, 932, 1348
BseYI CCCAGC 1 cut(s) 195
Bsh1236I CGCG 1 cut(s) 71
BshFI GGCC 2 cut(s) 225, 290
BsiSI CCGG 2 cut(s) 398, 1084
BslFI GGGAC 3 cut(s) 1253, 1522, 1564
BslI CCNNNNNNNGG 2 cut(s) 939, 1039
BsmAI GTCTC 1 cut(s) 388
BsmFI GGGAC 3 cut(s) 1253, 1522, 1564
BsnI GGCC 2 cut(s) 225, 290
Bso31I GGTCTC 1 cut(s) 388
Bsp1407I TGTACA 1 cut(s) 1479
Bsp143I GATC 5 cut(s) 199, 207, 1005, 1329, 1425
BspACI CCGC 9 cut(s) 69, 287, 350, 431, 452, 748, 1225, 1377, 1382
BspANI GGCC 2 cut(s) 225, 290
BspFNI CGCG 1 cut(s) 71
BspLI GGNNCC 8 cut(s) 6, 201, 568, 1044, 1374, 1538, 1552, 1553
BspMAI CTGCAG 2 cut(s) 508, 1366
BspOI GCTAGC 1 cut(s) 443
BspPI GGATC 3 cut(s) 194, 207, 1420
BspQI GCTCTTC 1 cut(s) 1469
BspTNI GGTCTC 1 cut(s) 388
BsrDI GCAATG 2 cut(s) 184, 557
BsrFI RCCGGY 1 cut(s) 397
BsrGI TGTACA 1 cut(s) 1479
BsrI ACTGG 2 cut(s) 551, 778
BssAI RCCGGY 1 cut(s) 397
BssECI CCNNGG 2 cut(s) 570, 1547
BssMI GATC 5 cut(s) 199, 207, 1005, 1329, 1425
Bst2UI CCWGG 3 cut(s) 222, 267, 1548
Bst4CI ACNGT 6 cut(s) 171, 719, 763, 1072, 1489, 1560
Bst6I CTCTTC 1 cut(s) 1469
BstAPI GCANNNNNTGC 2 cut(s) 512, 974
BstAUI TGTACA 1 cut(s) 1479
BstC8I GCNNGC 4 cut(s) 441, 513, 1144, 1341
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 4 cut(s) 102, 145, 612, 1177
BstFNI CGCG 1 cut(s) 71
BstH2I RGCGCY 1 cut(s) 1143
BstHHI GCGC 1 cut(s) 1142
BstKTI GATC 5 cut(s) 202, 210, 1008, 1332, 1428
BstMAI GTCTC 1 cut(s) 388
BstMBI GATC 5 cut(s) 199, 207, 1005, 1329, 1425
BstMWI GCNNNNNNNGC 9 cut(s) 68, 251, 500, 512, 517, 929, 974, 1139, 1361
BstNI CCWGG 3 cut(s) 222, 267, 1548
BstNSI RCATGY 1 cut(s) 274
BstSCI CCNGG 3 cut(s) 220, 265, 1546
BstSFI CTRYAG 4 cut(s) 504, 762, 1071, 1362
BstUI CGCG 1 cut(s) 71
BstV1I GCAGC 5 cut(s) 296, 372, 490, 932, 1348
BstV2I GAAGAC 2 cut(s) 784, 1489
BstX2I RGATCY 2 cut(s) 199, 1329
BstXI CCANNNNNNTGG 3 cut(s) 766, 864, 1533
BstYI RGATCY 2 cut(s) 199, 1329
BsuI GTATCC 1 cut(s) 763
BsuRI GGCC 2 cut(s) 225, 290
BtgI CCRYGG 1 cut(s) 570
BtgZI GCGATG 1 cut(s) 1135
BtrI CACGTC 1 cut(s) 294
BtsCI GGATG 4 cut(s) 102, 145, 612, 1177
BtsI GCAGTG 2 cut(s) 513, 631
BtsIMutI CAGTG 3 cut(s) 513, 631, 759
Cac8I GCNNGC 4 cut(s) 441, 513, 1144, 1341
CaiI CAGNNNCTG 1 cut(s) 195
CfoI GCGC 1 cut(s) 1142
Cfr10I RCCGGY 1 cut(s) 397
Cfr13I GGNCC 2 cut(s) 1536, 1551
CseI GACGC 1 cut(s) 483
Csp6I GTAC 5 cut(s) 172, 229, 544, 1258, 1480
CviQI GTAC 5 cut(s) 172, 229, 544, 1258, 1480
DpnI GATC 5 cut(s) 201, 209, 1007, 1331, 1427
DpnII GATC 5 cut(s) 199, 207, 1005, 1329, 1425
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 1 cut(s) 1469
EarI CTCTTC 1 cut(s) 1469
EciI GGCGGA 1 cut(s) 1240
Eco31I GGTCTC 1 cut(s) 388
Eco32I GATATC 1 cut(s) 1125
Eco47I GGWCC 2 cut(s) 1536, 1551
Eco57I CTGAAG 2 cut(s) 324, 451
EcoO109I RGGNCCY 1 cut(s) 1551
EcoRII CCWGG 3 cut(s) 220, 265, 1546
EcoRV GATATC 1 cut(s) 1125
EcoT22I ATGCAT 1 cut(s) 522
FalI AAGNNNNNCTT 2 cut(s) 408, 440
FaqI GGGAC 3 cut(s) 1253, 1522, 1564
FauI CCCGC 2 cut(s) 459, 1384
FbaI TGATCA 1 cut(s) 207
Fnu4HI GCNGC 7 cut(s) 69, 288, 310, 361, 504, 921, 1362
FokI GGATG 4 cut(s) 89, 152, 619, 1164
Fsp4HI GCNGC 7 cut(s) 69, 288, 310, 361, 504, 921, 1362
FspBI CTAG 7 cut(s) 242, 440, 795, 911, 962, 1265, 1305
GlaI GCGC 1 cut(s) 1141
GluI GCNGC 7 cut(s) 69, 288, 310, 361, 504, 921, 1362
GsaI CCCAGC 1 cut(s) 199
HaeII RGCGCY 1 cut(s) 1143
HaeIII GGCC 2 cut(s) 225, 290
HapII CCGG 2 cut(s) 398, 1084
HgaI GACGC 1 cut(s) 483
HhaI GCGC 1 cut(s) 1142
Hin6I GCGC 1 cut(s) 1140
HinP1I GCGC 1 cut(s) 1140
HincII GTYRAC 1 cut(s) 1492
HindII GTYRAC 1 cut(s) 1492
HinfI GANTC 2 cut(s) 29, 1063
HpaII CCGG 2 cut(s) 398, 1084
HphI GGTGA 1 cut(s) 202
Hpy166II GTNNAC 1 cut(s) 1492
Hpy188I TCNGA 5 cut(s) 34, 191, 304, 1122, 1323
Hpy188III TCNNGA 5 cut(s) 125, 404, 790, 833, 1423
Hpy8I GTNNAC 1 cut(s) 1492
Hpy99I CGWCG 1 cut(s) 298
HpyAV CCTTC 5 cut(s) 299, 720, 745, 1123, 1222
HpyCH4III ACNGT 6 cut(s) 171, 719, 763, 1072, 1489, 1560
HpyCH4IV ACGT 2 cut(s) 293, 1494
HpyF10VI GCNNNNNNNGC 9 cut(s) 68, 251, 500, 512, 517, 929, 974, 1139, 1361
HpySE526I ACGT 2 cut(s) 293, 1494
HspAI GCGC 1 cut(s) 1140
KflI GGGWCCC 1 cut(s) 1551
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 5 cut(s) 199, 207, 1005, 1329, 1425
LguI GCTCTTC 1 cut(s) 1469
LmnI GCTCC 2 cut(s) 317, 1048
Lsp1109I GCAGC 5 cut(s) 296, 372, 490, 932, 1348
LweI GCATC 3 cut(s) 529, 597, 964
MaeI CTAG 7 cut(s) 242, 440, 795, 911, 962, 1265, 1305
MaeII ACGT 2 cut(s) 293, 1494
MaeIII GTNAC 3 cut(s) 113, 495, 1300
MalI GATC 5 cut(s) 201, 209, 1007, 1331, 1427
MboI GATC 5 cut(s) 199, 207, 1005, 1329, 1425
MflI RGATCY 2 cut(s) 199, 1329
MluCI AATT 5 cut(s) 90, 184, 684, 821, 840
MlyI GAGTC 1 cut(s) 1072
MmeI TCCRAC 1 cut(s) 858
MnlI CCTC 7 cut(s) 116, 168, 228, 622, 838, 1271, 1317
Mph1103I ATGCAT 1 cut(s) 522
MroXI GAANNNNTTC 2 cut(s) 802, 1103
MseI TTAA 1 cut(s) 785
MslI CAYNNNNRTG 2 cut(s) 764, 1505
MspA1I CMGCKG 1 cut(s) 1384
MspI CCGG 2 cut(s) 398, 1084
MspR9I CCNGG 3 cut(s) 222, 267, 1548
MvaI CCWGG 3 cut(s) 222, 267, 1548
MvnI CGCG 1 cut(s) 71
MwoI GCNNNNNNNGC 9 cut(s) 68, 251, 500, 512, 517, 929, 974, 1139, 1361
NdeII GATC 5 cut(s) 199, 207, 1005, 1329, 1425
NheI GCTAGC 1 cut(s) 439
NlaIV GGNNCC 8 cut(s) 6, 201, 568, 1044, 1374, 1538, 1552, 1553
NmuCI GTSAC 3 cut(s) 113, 495, 1300
NsiI ATGCAT 1 cut(s) 522
NspI RCATGY 1 cut(s) 274
OliI CACNNNNGTG 1 cut(s) 764
PciSI GCTCTTC 1 cut(s) 1469
PdmI GAANNNNTTC 2 cut(s) 802, 1103
PfeI GAWTC 1 cut(s) 29
PkrI GCNGC 7 cut(s) 70, 289, 311, 362, 505, 922, 1363
PleI GAGTC 1 cut(s) 1071
PpsI GAGTC 1 cut(s) 1071
PpuMI RGGWCCY 1 cut(s) 1551
PsiI TTATAA 1 cut(s) 635
Psp5II RGGWCCY 1 cut(s) 1551
Psp6I CCWGG 3 cut(s) 220, 265, 1546
PspFI CCCAGC 1 cut(s) 195
PspGI CCWGG 3 cut(s) 220, 265, 1546
PspN4I GGNNCC 8 cut(s) 6, 201, 568, 1044, 1374, 1538, 1552, 1553
PspPI GGNCC 2 cut(s) 1536, 1551
PspPPI RGGWCCY 1 cut(s) 1551
PstI CTGCAG 2 cut(s) 508, 1366
PstNI CAGNNNCTG 1 cut(s) 195
PsuI RGATCY 2 cut(s) 199, 1329
RsaI GTAC 5 cut(s) 173, 230, 545, 1259, 1481
RsaNI GTAC 5 cut(s) 172, 229, 544, 1258, 1480
RseI CAYNNNNRTG 2 cut(s) 764, 1505
SapI GCTCTTC 1 cut(s) 1469
SaqAI TTAA 1 cut(s) 785
SatI GCNGC 7 cut(s) 69, 288, 310, 361, 504, 921, 1362
Sau3AI GATC 5 cut(s) 199, 207, 1005, 1329, 1425
Sau96I GGNCC 2 cut(s) 1536, 1551
ScaI AGTACT 2 cut(s) 173, 545
SchI GAGTC 1 cut(s) 1072
ScrFI CCNGG 3 cut(s) 222, 267, 1548
SfaNI GCATC 3 cut(s) 529, 597, 964
SfcI CTRYAG 4 cut(s) 504, 762, 1071, 1362
SinI GGWCC 2 cut(s) 1536, 1551
SmiMI CAYNNNNRTG 2 cut(s) 764, 1505
SmlI CTYRAG 4 cut(s) 159, 391, 739, 1060
SmoI CTYRAG 4 cut(s) 159, 391, 739, 1060
Sse9I AATT 5 cut(s) 90, 184, 684, 821, 840
SsiI CCGC 9 cut(s) 69, 287, 350, 431, 452, 748, 1225, 1377, 1382
SspI AATATT 2 cut(s) 598, 640
SspMI CTAG 7 cut(s) 242, 440, 795, 911, 962, 1265, 1305
StyD4I CCNGG 3 cut(s) 220, 265, 1546
TaaI ACNGT 6 cut(s) 171, 719, 763, 1072, 1489, 1560
TaiI ACGT 2 cut(s) 296, 1497
TaqI TCGA 3 cut(s) 791, 1453, 1522
TasI AATT 5 cut(s) 90, 184, 684, 821, 840
TatI WGTACW 4 cut(s) 171, 228, 543, 1479
TauI GCSGC 2 cut(s) 71, 290
TfiI GAWTC 1 cut(s) 29
Tru1I TTAA 1 cut(s) 785
Tru9I TTAA 1 cut(s) 785
TscAI CASTG 3 cut(s) 513, 631, 766
TseFI GTSAC 3 cut(s) 113, 495, 1300
TseI GCWGC 5 cut(s) 309, 360, 503, 920, 1361
Tsp45I GTSAC 3 cut(s) 113, 495, 1300
TspDTI ATGAA 8 cut(s) 423, 446, 852, 887, 1105, 1138, 1268, 1275
TspGWI ACGGA 1 cut(s) 559
TspRI CASTG 3 cut(s) 513, 631, 766
VpaK11BI GGWCC 2 cut(s) 1536, 1551
XceI RCATGY 1 cut(s) 274
XmnI GAANNNNTTC 2 cut(s) 802, 1103
XspI CTAG 7 cut(s) 242, 440, 795, 911, 962, 1265, 1305
ZrmI AGTACT 2 cut(s) 173, 545
Zsp2I ATGCAT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.