FvH4_6g15420

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
9589074 .. 9592191
3118 bp
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UTR
Exon/CDS
Intron
FvH4_6g15420.t1

Sequence Viewer

Length: 333 bp
ATGGTAACTGCATTGATAGGGGGAGCGGCTGTTGCTGCTGCTGCGTATGCTGCTAAGTATGGCATTAGGGCTTGGCAAGCATTCAAAGCAAGACCGCCTACACTGCGTAAGTTCTATGAAGGTGGTTTTCAACCTACTATGACCAGGAGGGAAGCAGCTCTAATACTTGGAGTCAGGGAGAGTGTTCCCATAACCAAGGTTAGGGAAGCCCATAGGAGGGTGATGGTCGCTAACCATCCTGATGCAGGAGGTAGTCATTACCTTGCTTCTAAAATTAACGAAGCCAAAGAAACCTTGCTTGGAAGAACCAAGGGGAGCAGCTCTGCATTTTGA

Protein Analysis

111

Amino Acids

11.84

Weight (kDa)

10.57

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010831)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 26
AciI CCGC 2 cut(s) 26, 95
AfiI CCNNNNNNNGG 4 cut(s) 201, 216, 217, 245
AgsI TTSAA 2 cut(s) 85, 131
AjnI CCWGG 1 cut(s) 143
AjuI GAANNNNNNNTTGG 2 cut(s) 282, 314
AluBI AGCT 2 cut(s) 158, 321
AluI AGCT 2 cut(s) 158, 321
ApeKI GCWGC 6 cut(s) 35, 38, 41, 50, 155, 318
AsuHPI GGTGA 1 cut(s) 232
BbvI GCAGC 5 cut(s) 22, 25, 28, 37, 167
BccI CCATC 2 cut(s) 217, 243
BciT130I CCWGG 1 cut(s) 145
BisI GCNGC 7 cut(s) 27, 36, 39, 42, 51, 156, 319
BlsI GCNGC 7 cut(s) 28, 37, 40, 43, 52, 157, 320
Bme1390I CCNGG 1 cut(s) 145
BmrFI CCNGG 1 cut(s) 145
BmsI GCATC 1 cut(s) 232
BsaJI CCNNGG 2 cut(s) 195, 309
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 4 cut(s) 201, 216, 217, 245
BseBI CCWGG 1 cut(s) 145
BseDI CCNNGG 2 cut(s) 195, 309
BseGI GGATG 1 cut(s) 235
BseLI CCNNNNNNNGG 4 cut(s) 201, 216, 217, 245
BseXI GCAGC 5 cut(s) 22, 25, 28, 37, 167
BslI CCNNNNNNNGG 4 cut(s) 201, 216, 217, 245
BsmI GAATGC 1 cut(s) 80
BspACI CCGC 2 cut(s) 26, 95
BsrBI CCGCTC 1 cut(s) 26
BssECI CCNNGG 2 cut(s) 195, 309
BssT1I CCWWGG 2 cut(s) 195, 309
Bst2UI CCWGG 1 cut(s) 145
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 1 cut(s) 54
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 1 cut(s) 235
BstMWI GCNNNNNNNGC 8 cut(s) 32, 35, 41, 47, 50, 77, 86, 103
BstNI CCWGG 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 143
BstV1I GCAGC 5 cut(s) 22, 25, 28, 37, 167
BtsCI GGATG 1 cut(s) 235
BtsI GCAGTG 1 cut(s) 101
BtsIMutI CAGTG 1 cut(s) 101
Cac8I GCNNGC 1 cut(s) 78
CviJI RGCY 6 cut(s) 29, 71, 158, 209, 284, 321
CviKI_1 RGCY 6 cut(s) 29, 71, 158, 209, 284, 321
DdeI CTNAG 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 195, 309
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoRII CCWGG 1 cut(s) 143
EcoT14I CCWWGG 2 cut(s) 195, 309
ErhI CCWWGG 2 cut(s) 195, 309
FaiI YATR 6 cut(s) 48, 60, 117, 140, 191, 213
Fnu4HI GCNGC 7 cut(s) 27, 36, 39, 42, 51, 156, 319
FokI GGATG 1 cut(s) 222
Fsp4HI GCNGC 7 cut(s) 27, 36, 39, 42, 51, 156, 319
GluI GCNGC 7 cut(s) 27, 36, 39, 42, 51, 156, 319
HinfI GANTC 1 cut(s) 171
HphI GGTGA 1 cut(s) 232
Hpy188III TCNNGA 1 cut(s) 239
HpyAV CCTTC 1 cut(s) 113
HpyCH4V TGCA 3 cut(s) 11, 245, 326
HpyF10VI GCNNNNNNNGC 8 cut(s) 32, 35, 41, 47, 50, 77, 86, 103
HpyF3I CTNAG 1 cut(s) 54
LmnI GCTCC 2 cut(s) 23, 315
LpnPI CCDG 5 cut(s) 130, 157, 160, 231, 252
Lsp1109I GCAGC 5 cut(s) 22, 25, 28, 37, 167
LweI GCATC 1 cut(s) 232
MaeIII GTNAC 1 cut(s) 4
MbiI CCGCTC 1 cut(s) 26
MboII GAAGA 1 cut(s) 315
MluCI AATT 1 cut(s) 273
MlyI GAGTC 1 cut(s) 180
MnlI CCTC 3 cut(s) 141, 210, 242
MseI TTAA 1 cut(s) 276
MslI CAYNNNNRTG 1 cut(s) 240
MspR9I CCNGG 1 cut(s) 145
Mva1269I GAATGC 1 cut(s) 80
MvaI CCWGG 1 cut(s) 145
MwoI GCNNNNNNNGC 8 cut(s) 32, 35, 41, 47, 50, 77, 86, 103
PctI GAATGC 1 cut(s) 80
PkrI GCNGC 7 cut(s) 28, 37, 40, 43, 52, 157, 320
PleI GAGTC 1 cut(s) 179
PpsI GAGTC 1 cut(s) 179
Psp6I CCWGG 1 cut(s) 143
PspGI CCWGG 1 cut(s) 143
RseI CAYNNNNRTG 1 cut(s) 240
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 7 cut(s) 27, 36, 39, 42, 51, 156, 319
SchI GAGTC 1 cut(s) 180
ScrFI CCNGG 1 cut(s) 145
SetI ASST 8 cut(s) 124, 136, 160, 201, 253, 264, 296, 323
SfaNI GCATC 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 240
Sse9I AATT 1 cut(s) 273
SsiI CCGC 2 cut(s) 26, 95
StyD4I CCNGG 1 cut(s) 143
StyI CCWWGG 2 cut(s) 195, 309
TasI AATT 1 cut(s) 273
TauI GCSGC 1 cut(s) 29
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TscAI CASTG 1 cut(s) 108
TseI GCWGC 6 cut(s) 35, 38, 41, 50, 155, 318
TspDTI ATGAA 1 cut(s) 132
TspRI CASTG 1 cut(s) 108
XagI CCTNNNNNAGG 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.