Rh3AG147100

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
12980682 .. 12982655
1974 bp
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UTR
Exon/CDS
Intron
Rh3AG147100.1

Sequence Viewer

Length: 339 bp
ATGGTAACTGCGTTGATAGGAGGAGCGGCTGTTGCTGCTGCTGCTTATGCTGGTAGATATGGCATTCAGGCTTGGCAAGCATTCAAAGCAAGACCTCCTACAGCTCGACTGCGTAAATTTTATGAAGGTGGTTTTCAACCTACTATGACCCGGAGGGAAGCAGCTCTAATACTTGGAGTCAGGGAGAGTGTTCCCATAACCAAGGTCAGGGAAGCCCATAGGAGGGTGATGGTTGCTAACCATCCAGATGCAGGAGGTAGCCATTACCTTGCTTCTAAAATCAATGAAGCCAAAGATACATTGCTTGGAAAAATCAGAGGCGGCGGCTCTGCATTTTGA

Protein Analysis

112

Amino Acids

11.99

Weight (kDa)

10.73

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010831)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 26
AciI CCGC 3 cut(s) 26, 321, 324
AcsI RAATTY 1 cut(s) 116
AfiI CCNNNNNNNGG 4 cut(s) 207, 222, 223, 251
AgsI TTSAA 2 cut(s) 85, 137
AluBI AGCT 2 cut(s) 104, 164
AluI AGCT 2 cut(s) 104, 164
ApeKI GCWGC 4 cut(s) 35, 38, 41, 161
ApoI RAATTY 1 cut(s) 116
AsuC2I CCSGG 1 cut(s) 151
AsuHPI GGTGA 1 cut(s) 238
BbvI GCAGC 4 cut(s) 22, 25, 28, 173
BccI CCATC 2 cut(s) 223, 249
BcnI CCSGG 1 cut(s) 151
BfmI CTRYAG 1 cut(s) 99
BisI GCNGC 7 cut(s) 27, 36, 39, 42, 162, 322, 325
BlsI GCNGC 7 cut(s) 28, 37, 40, 43, 163, 323, 326
Bme1390I CCNGG 1 cut(s) 151
BmrFI CCNGG 1 cut(s) 151
BmsI GCATC 1 cut(s) 238
BpuMI CCSGG 1 cut(s) 151
BsaJI CCNNGG 1 cut(s) 201
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 222, 223, 251
Bse3DI GCAATG 1 cut(s) 299
BseDI CCNNGG 1 cut(s) 201
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 4 cut(s) 207, 222, 223, 251
BseMI GCAATG 1 cut(s) 299
BseRI GAGGAG 1 cut(s) 36
BseXI GCAGC 4 cut(s) 22, 25, 28, 173
BsiSI CCGG 1 cut(s) 151
BslI CCNNNNNNNGG 4 cut(s) 207, 222, 223, 251
BsmI GAATGC 2 cut(s) 63, 80
BspACI CCGC 3 cut(s) 26, 321, 324
BsrBI CCGCTC 1 cut(s) 26
BsrDI GCAATG 1 cut(s) 299
BssECI CCNNGG 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 201
BstC8I GCNNGC 1 cut(s) 78
BstF5I GGATG 1 cut(s) 241
BstMWI GCNNNNNNNGC 6 cut(s) 32, 35, 41, 47, 77, 86
BstSCI CCNGG 1 cut(s) 149
BstSFI CTRYAG 1 cut(s) 99
BstV1I GCAGC 4 cut(s) 22, 25, 28, 173
BtsCI GGATG 1 cut(s) 241
Cac8I GCNNGC 1 cut(s) 78
CviJI RGCY 8 cut(s) 29, 71, 104, 164, 215, 261, 290, 327
CviKI_1 RGCY 8 cut(s) 29, 71, 104, 164, 215, 261, 290, 327
Eco130I CCWWGG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 201
FaiI YATR 6 cut(s) 48, 60, 123, 146, 197, 219
Fnu4HI GCNGC 7 cut(s) 27, 36, 39, 42, 162, 322, 325
FokI GGATG 1 cut(s) 228
Fsp4HI GCNGC 7 cut(s) 27, 36, 39, 42, 162, 322, 325
GluI GCNGC 7 cut(s) 27, 36, 39, 42, 162, 322, 325
HapII CCGG 1 cut(s) 151
HinfI GANTC 1 cut(s) 177
HpaII CCGG 1 cut(s) 151
HphI GGTGA 1 cut(s) 238
Hpy188I TCNGA 1 cut(s) 317
Hpy188III TCNNGA 1 cut(s) 245
HpyAV CCTTC 1 cut(s) 119
HpyCH4V TGCA 2 cut(s) 251, 332
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 35, 41, 47, 77, 86
LmnI GCTCC 1 cut(s) 23
LpnPI CCDG 7 cut(s) 36, 53, 164, 166, 193, 237, 258
Lsp1109I GCAGC 4 cut(s) 22, 25, 28, 173
LweI GCATC 1 cut(s) 238
MaeIII GTNAC 1 cut(s) 4
MbiI CCGCTC 1 cut(s) 26
MluCI AATT 1 cut(s) 116
MlyI GAGTC 1 cut(s) 186
MnlI CCTC 6 cut(s) 14, 105, 147, 216, 248, 311
MslI CAYNNNNRTG 1 cut(s) 246
MspI CCGG 1 cut(s) 151
MspR9I CCNGG 1 cut(s) 151
Mva1269I GAATGC 2 cut(s) 63, 80
MwoI GCNNNNNNNGC 6 cut(s) 32, 35, 41, 47, 77, 86
NciI CCSGG 1 cut(s) 151
PctI GAATGC 2 cut(s) 63, 80
PkrI GCNGC 7 cut(s) 28, 37, 40, 43, 163, 323, 326
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
RseI CAYNNNNRTG 1 cut(s) 246
SatI GCNGC 7 cut(s) 27, 36, 39, 42, 162, 322, 325
SchI GAGTC 1 cut(s) 186
ScrFI CCNGG 1 cut(s) 151
SetI ASST 8 cut(s) 97, 106, 130, 142, 166, 207, 259, 270
SfaNI GCATC 1 cut(s) 238
SfcI CTRYAG 1 cut(s) 99
SmiMI CAYNNNNRTG 1 cut(s) 246
Sse9I AATT 1 cut(s) 116
SsiI CCGC 3 cut(s) 26, 321, 324
StyD4I CCNGG 1 cut(s) 149
StyI CCWWGG 1 cut(s) 201
TaqI TCGA 1 cut(s) 106
TasI AATT 1 cut(s) 116
TauI GCSGC 3 cut(s) 29, 324, 327
TseI GCWGC 4 cut(s) 35, 38, 41, 161
TspDTI ATGAA 2 cut(s) 138, 300
XapI RAATTY 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.