FvH4_6g18420

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
12172655 .. 12175276
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18420.t1

Sequence Viewer

Length: 1332 bp
ATGATGAAGAAATTCAGCCTGCATCTGTTCTCTCTCCTCCTAACTATCTCTCTCGTCTCTCAGCTCCTAAAATCACAAGATGATGATTTTGTTAGGCAACCAGCTGGTAGAGTAATACTCACTCCTCATGGTCGTTCTGATTCAGACCCTCAACAGGTGCATATTTCACTGGCGGGAAAGGATCACATGAGAGTTTCATGGGTTACAGACAACAGTCATAAAAAATCTATTGTGGAGTATGGAGAGCAATCTGGAAAACATAATGCAAAGGCTACTGGAGAACACACACGGTATGATTATTTTTCATATACTTCTGGGCGGATCCACCATGTTACCATTGGCCCTTTGGAGCCTTCAACCACATACTTCTATATCTGTGGTGGTTCCGGTCCGGAGTTCTCCTTCAAGACACCCCCACAGACACATCCGATCGAATTTGTAGTGGTTGGTGACCTAGGACAAACTGATTGGACTAACTCCACTCTAGCCCACATCAAAAGCATAGACTACGATGTACTCCTCCTACCTGGTGACCTATCCTATGCCAATGGACACCAACCCCTTTGGGACTCGTTCGGCCGGATTGTCGAGCCCTTGGCAAGCCGCCGCCCCTGGATGGTCACACAAGGCAACCACGAGGTGGAAAGCTCTCCTGTCGTCTCCCCAACCGGCTTCAAAGCCTTCAATGCCAGGTGGCAAATGCCGTACAAGGAAAGCGGATCCACCTCAAACTTGTACTACTCCTTTGAAGTTGCTGGCACCCACATCATCATGCTTGGCTCCTATGCCGAGTTCGACACCGAATCATCGCAGTACGCGTGGCTTGTATCCGACTCGGCGAAGATTGATAGAAAGAAAACGCCGTGGGTTGTGGTGGTATTGCATGCACCGTGGTATAATACCAACACTGCTCATCAGGGTGAAGGAGAGAGCATGAGAAAGTCTGTGGAGGAGTTGCTGTATAAGGCACGGGTTGATCTGGTTTTTTCAGGGCACGTTCATGCCTATGAGCGATTTACAAGGGTGTACAACAAGGAGGCTGATCCATGCGGTCCGGTGCATGTTACCATTGGCGACGGTGGGAACCTAGAAGGACTGGCATTAATGTTCGAAGACCCAGCTTCTCCTCTCTCCTTGTACAGAGAACCAAGTTTTGGACATGGACGACTCAAGATAGTGAATGAAACACACGCCGTTTGGGGATGGCATCGCAACCACGACTCAAACTTTGTCGTAAAAGACCAAGTTTGGATACAAAGTTTGAGCTCCTCTAAAAGATGCTCCGAATCTGTGGACCAGGAAGTTCTATTGTCATCTAAGGATGAATTGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

444

Amino Acids

49.85

Weight (kDa)

6.14

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_ac_phosph_N PF16656 50 - 137 4.2e-24 Purple acid Phosphatase, N-terminal domain
Metallophos PF00149 146 - 336 4e-20 Calcineurin-like phosphoesterase
Metallophos_C PF14008 351 - 409 2.2e-17 Iron/zinc purple acid phosphatase-like protein C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 758
AccB7I CCANNNNNTGG 2 cut(s) 640, 1154
AccII CGCG 1 cut(s) 818
AccIII TCCGGA 1 cut(s) 391
AciI CCGC 6 cut(s) 173, 319, 604, 607, 717, 1050
AclWI GGATC 6 cut(s) 189, 316, 329, 714, 727, 1037
AcoI YGGCCR 1 cut(s) 577
AcsI RAATTY 2 cut(s) 11, 434
AdeI CACNNNGTG 1 cut(s) 640
AfaI GTAC 6 cut(s) 516, 707, 737, 815, 1028, 1139
AfiI CCNNNNNNNGG 4 cut(s) 154, 616, 640, 1154
AflIII ACRYGT 1 cut(s) 816
AgsI TTSAA 5 cut(s) 357, 406, 676, 685, 749
AjnI CCWGG 4 cut(s) 526, 611, 689, 1296
AjuI GAANNNNNNNTTGG 2 cut(s) 1137, 1169
AluBI AGCT 5 cut(s) 64, 104, 648, 1121, 1266
AluI AGCT 5 cut(s) 64, 104, 648, 1121, 1266
Alw21I GWGCWC 1 cut(s) 1268
Alw26I GTCTC 2 cut(s) 61, 664
AlwI GGATC 6 cut(s) 189, 316, 329, 714, 727, 1037
Aor13HI TCCGGA 1 cut(s) 391
AoxI GGCC 2 cut(s) 340, 577
ApoI RAATTY 2 cut(s) 11, 434
ArsI GACNNNNNNTTYG 2 cut(s) 1211, 1243
AseI ATTAAT 1 cut(s) 1103
Asp700I GAANNNNTTC 1 cut(s) 11
AspA2I CCTAGG 1 cut(s) 454
AspS9I GGNCC 4 cut(s) 341, 389, 1052, 1294
AsuHPI GGTGA 3 cut(s) 461, 542, 932
AsuII TTCGAA 1 cut(s) 1110
AvaII GGWCC 3 cut(s) 389, 1052, 1294
AvrII CCTAGG 1 cut(s) 454
BaeGI GKGCMC 1 cut(s) 996
BamHI GGATCC 2 cut(s) 321, 719
BanI GGYRCC 1 cut(s) 758
BanII GRGCYC 2 cut(s) 594, 1268
BauI CACGAG 1 cut(s) 635
BbsI GAAGAC 1 cut(s) 1119
Bbv12I GWGCWC 1 cut(s) 1268
BccI CCATC 2 cut(s) 610, 1197
BceAI ACGGC 3 cut(s) 688, 847, 1178
BciT130I CCWGG 4 cut(s) 528, 613, 691, 1298
BciVI GTATCC 2 cut(s) 838, 1245
BcoDI GTCTC 2 cut(s) 61, 664
BfaI CTAG 3 cut(s) 455, 485, 1088
BfuI GTATCC 2 cut(s) 838, 1245
BisI GCNGC 2 cut(s) 604, 607
BlnI CCTAGG 1 cut(s) 454
BlsI GCNGC 2 cut(s) 605, 608
Bme1390I CCNGG 4 cut(s) 528, 613, 691, 1298
Bme18I GGWCC 3 cut(s) 389, 1052, 1294
BmgT120I GGNCC 4 cut(s) 341, 389, 1052, 1294
BmiI GGNNCC 7 cut(s) 323, 351, 385, 721, 760, 781, 1085
BmrFI CCNGG 4 cut(s) 528, 613, 691, 1298
BmsI GCATC 3 cut(s) 31, 1216, 1268
BoxI GACNNNNGTC 1 cut(s) 213
BpiI GAAGAC 1 cut(s) 1119
BplI GAGNNNNNCTC 2 cut(s) 102, 134
BpmI CTGGAG 1 cut(s) 297
Bpu14I TTCGAA 1 cut(s) 1110
BpuEI CTTGAG 1 cut(s) 1154
BsaJI CCNNGG 5 cut(s) 454, 594, 611, 863, 890
BsaWI WCCGGW 3 cut(s) 386, 391, 1054
BsaXI ACNNNNNCTCC 2 cut(s) 944, 974
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 616, 640, 1154
Bse118I RCCGGY 1 cut(s) 668
Bse1I ACTGG 3 cut(s) 174, 280, 1101
BseAI TCCGGA 1 cut(s) 391
BseBI CCWGG 4 cut(s) 528, 613, 691, 1298
BseDI CCNNGG 5 cut(s) 454, 594, 611, 863, 890
BseGI GGATG 4 cut(s) 424, 621, 1208, 1327
BseLI CCNNNNNNNGG 4 cut(s) 154, 616, 640, 1154
BseMII CTCAG 1 cut(s) 74
BseNI ACTGG 3 cut(s) 174, 280, 1101
BseRI GAGGAG 6 cut(s) 26, 114, 509, 965, 1116, 1258
BseSI GKGCMC 1 cut(s) 996
BseX3I CGGCCG 1 cut(s) 577
BseYI CCCAGC 1 cut(s) 1117
Bsh1236I CGCG 1 cut(s) 818
Bsh1285I CGRYCG 2 cut(s) 432, 580
BshFI GGCC 2 cut(s) 342, 579
BshNI GGYRCC 1 cut(s) 758
BsiEI CGRYCG 2 cut(s) 432, 580
BsiHKAI GWGCWC 1 cut(s) 1268
BsiSI CCGG 5 cut(s) 387, 392, 580, 669, 1055
BslFI GGGAC 1 cut(s) 581
BslI CCNNNNNNNGG 4 cut(s) 154, 616, 640, 1154
BsmAI GTCTC 2 cut(s) 61, 664
BsmBI CGTCTC 2 cut(s) 61, 664
BsmFI GGGAC 1 cut(s) 581
BsnI GGCC 2 cut(s) 342, 579
Bsp119I TTCGAA 1 cut(s) 1110
Bsp1286I GDGCHC 3 cut(s) 594, 996, 1268
Bsp13I TCCGGA 1 cut(s) 391
Bsp1407I TGTACA 2 cut(s) 1026, 1137
Bsp143I GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
BspACI CCGC 6 cut(s) 173, 319, 604, 607, 717, 1050
BspANI GGCC 2 cut(s) 342, 579
BspCNI CTCAG 1 cut(s) 73
BspEI TCCGGA 1 cut(s) 391
BspFNI CGCG 1 cut(s) 818
BspLI GGNNCC 7 cut(s) 323, 351, 385, 721, 760, 781, 1085
BspPI GGATC 6 cut(s) 189, 316, 329, 714, 727, 1037
BspT104I TTCGAA 1 cut(s) 1110
BspT107I GGYRCC 1 cut(s) 758
BsrFI RCCGGY 1 cut(s) 668
BsrGI TGTACA 2 cut(s) 1026, 1137
BsrI ACTGG 3 cut(s) 174, 280, 1101
BssAI RCCGGY 1 cut(s) 668
BssECI CCNNGG 5 cut(s) 454, 594, 611, 863, 890
BssMI GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
BssSI CACGAG 1 cut(s) 635
BssT1I CCWWGG 2 cut(s) 454, 594
Bst2BI CACGAG 1 cut(s) 635
Bst2UI CCWGG 4 cut(s) 528, 613, 691, 1298
Bst4CI ACNGT 4 cut(s) 215, 291, 891, 1079
BstAUI TGTACA 2 cut(s) 1026, 1137
BstBI TTCGAA 1 cut(s) 1110
BstC8I GCNNGC 4 cut(s) 20, 601, 757, 885
BstDEI CTNAG 2 cut(s) 60, 1317
BstDSI CCRYGG 2 cut(s) 863, 890
BstEII GGTNACC 2 cut(s) 449, 530
BstF5I GGATG 4 cut(s) 424, 621, 1208, 1327
BstFNI CGCG 1 cut(s) 818
BstKTI GATC 6 cut(s) 184, 324, 432, 722, 979, 1045
BstMAI GTCTC 2 cut(s) 61, 664
BstMBI GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
BstMCI CGRYCG 2 cut(s) 432, 580
BstMWI GCNNNNNNNGC 1 cut(s) 686
BstNI CCWGG 4 cut(s) 528, 613, 691, 1298
BstNSI RCATGY 2 cut(s) 887, 1064
BstPAI GACNNNNGTC 1 cut(s) 213
BstPI GGTNACC 2 cut(s) 449, 530
BstSCI CCNGG 4 cut(s) 526, 611, 689, 1296
BstSLI GKGCMC 1 cut(s) 996
BstUI CGCG 1 cut(s) 818
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 2 cut(s) 321, 719
BstYI RGATCY 2 cut(s) 321, 719
BstZI CGGCCG 1 cut(s) 577
BsuI GTATCC 2 cut(s) 838, 1245
BsuRI GGCC 2 cut(s) 342, 579
BtgI CCRYGG 2 cut(s) 863, 890
BtgZI GCGATG 2 cut(s) 792, 1193
BtsCI GGATG 4 cut(s) 424, 621, 1208, 1327
BtsI GCAGTG 1 cut(s) 906
BtsIMutI CAGTG 2 cut(s) 167, 906
Cac8I GCNNGC 4 cut(s) 20, 601, 757, 885
Cfr10I RCCGGY 1 cut(s) 668
Cfr13I GGNCC 4 cut(s) 341, 389, 1052, 1294
CpoI CGGWCCG 2 cut(s) 389, 1052
CsiI ACCWGGT 1 cut(s) 526
Csp6I GTAC 6 cut(s) 515, 706, 736, 814, 1027, 1138
CspI CGGWCCG 2 cut(s) 389, 1052
CviQI GTAC 6 cut(s) 515, 706, 736, 814, 1027, 1138
DdeI CTNAG 2 cut(s) 60, 1317
DpnI GATC 6 cut(s) 183, 323, 431, 721, 978, 1044
DpnII GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
DraIII CACNNNGTG 1 cut(s) 640
EaeI YGGCCR 1 cut(s) 577
EagI CGGCCG 1 cut(s) 577
EciI GGCGGA 1 cut(s) 334
Ecl136II GAGCTC 1 cut(s) 1266
EclXI CGGCCG 1 cut(s) 577
Eco130I CCWWGG 2 cut(s) 454, 594
Eco24I GRGCYC 2 cut(s) 594, 1268
Eco47I GGWCC 3 cut(s) 389, 1052, 1294
Eco52I CGGCCG 1 cut(s) 577
Eco53kI GAGCTC 1 cut(s) 1266
Eco91I GGTNACC 2 cut(s) 449, 530
EcoICRI GAGCTC 1 cut(s) 1266
EcoO65I GGTNACC 2 cut(s) 449, 530
EcoRII CCWGG 4 cut(s) 526, 611, 689, 1296
EcoT14I CCWWGG 2 cut(s) 454, 594
EcoT38I GRGCYC 2 cut(s) 594, 1268
ErhI CCWWGG 2 cut(s) 454, 594
Esp3I CGTCTC 2 cut(s) 61, 664
FaqI GGGAC 1 cut(s) 581
FauI CCCGC 1 cut(s) 166
Fnu4HI GCNGC 2 cut(s) 604, 607
FokI GGATG 3 cut(s) 411, 628, 1215
FriOI GRGCYC 2 cut(s) 594, 1268
Fsp4HI GCNGC 2 cut(s) 604, 607
FspBI CTAG 3 cut(s) 455, 485, 1088
GluI GCNGC 2 cut(s) 604, 607
GsaI CCCAGC 1 cut(s) 1121
GsuI CTGGAG 1 cut(s) 297
HaeIII GGCC 2 cut(s) 342, 579
HapII CCGG 5 cut(s) 387, 392, 580, 669, 1055
HinfI GANTC 7 cut(s) 140, 569, 803, 833, 1167, 1220, 1286
HpaII CCGG 5 cut(s) 387, 392, 580, 669, 1055
HphI GGTGA 3 cut(s) 461, 542, 932
Hpy166II GTNNAC 2 cut(s) 1027, 1294
Hpy188I TCNGA 5 cut(s) 139, 145, 429, 832, 1285
Hpy188III TCNNGA 4 cut(s) 252, 392, 406, 1171
Hpy8I GTNNAC 2 cut(s) 1027, 1294
Hpy99I CGWCG 1 cut(s) 1079
HpyAV CCTTC 5 cut(s) 363, 412, 691, 917, 1085
HpyCH4III ACNGT 4 cut(s) 215, 291, 891, 1079
HpyCH4IV ACGT 1 cut(s) 996
HpyCH4V TGCA 6 cut(s) 22, 160, 266, 883, 887, 1060
HpyF10VI GCNNNNNNNGC 1 cut(s) 686
HpyF3I CTNAG 2 cut(s) 60, 1317
HpySE526I ACGT 1 cut(s) 996
Kpn2I TCCGGA 1 cut(s) 391
Kzo9I GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
LmnI GCTCC 5 cut(s) 69, 349, 785, 1271, 1286
LweI GCATC 3 cut(s) 31, 1216, 1268
MabI ACCWGGT 1 cut(s) 526
MaeI CTAG 3 cut(s) 455, 485, 1088
MaeII ACGT 1 cut(s) 996
MaeIII GTNAC 6 cut(s) 202, 331, 449, 530, 619, 1063
MalI GATC 6 cut(s) 183, 323, 431, 721, 978, 1044
MboI GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
MboII GAAGA 3 cut(s) 19, 853, 1124
MflI RGATCY 2 cut(s) 321, 719
MhlI GDGCHC 3 cut(s) 594, 996, 1268
MluCI AATT 3 cut(s) 11, 434, 1325
MluI ACGCGT 1 cut(s) 816
MlyI GAGTC 4 cut(s) 563, 827, 1161, 1214
MmeI TCCRAC 1 cut(s) 855
MroI TCCGGA 1 cut(s) 391
MroXI GAANNNNTTC 1 cut(s) 11
MseI TTAA 1 cut(s) 1103
MslI CAYNNNNRTG 4 cut(s) 770, 918, 999, 1005
MspA1I CMGCKG 1 cut(s) 104
MspI CCGG 5 cut(s) 387, 392, 580, 669, 1055
MspR9I CCNGG 4 cut(s) 528, 613, 691, 1298
MvaI CCWGG 4 cut(s) 528, 613, 691, 1298
MvnI CGCG 1 cut(s) 818
MwoI GCNNNNNNNGC 1 cut(s) 686
NdeII GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
NlaIV GGNNCC 7 cut(s) 323, 351, 385, 721, 760, 781, 1085
NmeAIII GCCGAG 2 cut(s) 814, 815
NmuCI GTSAC 3 cut(s) 449, 530, 619
NspI RCATGY 2 cut(s) 887, 1064
NspV TTCGAA 1 cut(s) 1110
PaeI GCATGC 1 cut(s) 887
PcsI WCGNNNNNNNCGW 1 cut(s) 815
PdmI GAANNNNTTC 1 cut(s) 11
PfeI GAWTC 3 cut(s) 140, 803, 1286
PflMI CCANNNNNTGG 2 cut(s) 640, 1154
PkrI GCNGC 2 cut(s) 605, 608
Ple19I CGATCG 1 cut(s) 432
PleI GAGTC 4 cut(s) 563, 827, 1161, 1214
PpsI GAGTC 4 cut(s) 563, 827, 1161, 1214
PshAI GACNNNNGTC 1 cut(s) 213
PshBI ATTAAT 1 cut(s) 1103
Psp124BI GAGCTC 1 cut(s) 1268
Psp6I CCWGG 4 cut(s) 526, 611, 689, 1296
PspEI GGTNACC 2 cut(s) 449, 530
PspFI CCCAGC 1 cut(s) 1117
PspGI CCWGG 4 cut(s) 526, 611, 689, 1296
PspN4I GGNNCC 7 cut(s) 323, 351, 385, 721, 760, 781, 1085
PspPI GGNCC 4 cut(s) 341, 389, 1052, 1294
PsuI RGATCY 2 cut(s) 321, 719
PvuI CGATCG 1 cut(s) 432
PvuII CAGCTG 1 cut(s) 104
RsaI GTAC 6 cut(s) 516, 707, 737, 815, 1028, 1139
RsaNI GTAC 6 cut(s) 515, 706, 736, 814, 1027, 1138
RseI CAYNNNNRTG 4 cut(s) 770, 918, 999, 1005
Rsr2I CGGWCCG 2 cut(s) 389, 1052
RsrII CGGWCCG 2 cut(s) 389, 1052
SacI GAGCTC 1 cut(s) 1268
SaqAI TTAA 1 cut(s) 1103
SatI GCNGC 2 cut(s) 604, 607
Sau3AI GATC 6 cut(s) 181, 321, 429, 719, 976, 1042
Sau96I GGNCC 4 cut(s) 341, 389, 1052, 1294
SchI GAGTC 4 cut(s) 563, 827, 1161, 1214
ScrFI CCNGG 4 cut(s) 528, 613, 691, 1298
SduI GDGCHC 3 cut(s) 594, 996, 1268
SexAI ACCWGGT 1 cut(s) 526
SfaNI GCATC 3 cut(s) 31, 1216, 1268
SfuI TTCGAA 1 cut(s) 1110
SinI GGWCC 3 cut(s) 389, 1052, 1294
SmiMI CAYNNNNRTG 4 cut(s) 770, 918, 999, 1005
SmlI CTYRAG 1 cut(s) 1169
SmoI CTYRAG 1 cut(s) 1169
SphI GCATGC 1 cut(s) 887
Sse9I AATT 3 cut(s) 11, 434, 1325
SsiI CCGC 6 cut(s) 173, 319, 604, 607, 717, 1050
SspMI CTAG 3 cut(s) 455, 485, 1088
SstI GAGCTC 1 cut(s) 1268
StyD4I CCNGG 4 cut(s) 526, 611, 689, 1296
StyI CCWWGG 2 cut(s) 454, 594
TaaI ACNGT 4 cut(s) 215, 291, 891, 1079
TaiI ACGT 1 cut(s) 999
TaqI TCGA 4 cut(s) 432, 588, 795, 1110
TasI AATT 3 cut(s) 11, 434, 1325
TatI WGTACW 4 cut(s) 514, 735, 1026, 1137
TauI GCSGC 2 cut(s) 606, 609
TfiI GAWTC 3 cut(s) 140, 803, 1286
Tru1I TTAA 1 cut(s) 1103
Tru9I TTAA 1 cut(s) 1103
TscAI CASTG 2 cut(s) 174, 913
TseFI GTSAC 3 cut(s) 449, 530, 619
Tsp45I GTSAC 3 cut(s) 449, 530, 619
TspDTI ATGAA 5 cut(s) 20, 186, 294, 989, 1197
TspRI CASTG 2 cut(s) 174, 913
Van91I CCANNNNNTGG 2 cut(s) 640, 1154
VpaK11BI GGWCC 3 cut(s) 389, 1052, 1294
VspI ATTAAT 1 cut(s) 1103
XapI RAATTY 2 cut(s) 11, 434
XceI RCATGY 2 cut(s) 887, 1064
XcmI CCANNNNNNNNNTGG 2 cut(s) 335, 343
XmaJI CCTAGG 1 cut(s) 454
XmnI GAANNNNTTC 1 cut(s) 11
XspI CTAG 3 cut(s) 455, 485, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.