FvH4_6g18820

Glutathione S-transferase, N-terminal domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
12384026 .. 12396463
12438 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18820.t5

Sequence Viewer

Length: 1011 bp
ATGGCCAAAGCTCTAAACTTGATACCCACCTCAACTTTCCCGCCATTTTCATGCCCCAGAAGACTACCCACAAGGAGATTATTTTCAGTTAGAGCCACAACAGAGTCCCCAGAGACACCCACAAGTTCGTCATCAGCTTCAGTTCAAGTAAAGCCTGAACCTTCAACATTTGCTCCCCCACCCAATTTCAAGGCCCCGGAGCCCAAACGGTTCGGAGTCCGACCCGATAAGACTTTGGACGTCTTGGGTGCTTCTCTTGCCATATTCTTTCGCTTGGGCTGCGGCGTTTTCGTTTCTGGCTATTCGTTTTCGTTTGTTCCAAAGGATGAGATCCCTCCAGACCAGTATGCTCTCGATTTTAATGATTCCAAGGTCAAGGAGACTTCAAAATTAGGACCACGGCCAGAGAAGCCTGTTGAGATATATGAGTTTGAAGGCTGTCCATTCTGCCGGAAGGTTAGGGAAATTGTTGCAGTGCTGGACCTTGATGTTATATTTTATCCGTGCCCAAGAAATGGTCCAAACTTCCGTCCAAAGGTTGGGGAGATGGGCGGCAAGAAGCAGTTCCCTTACATGGTGGATCCAAACACTGGAGTTTCAATGTACGAATCAGACGACATAATCAAGTACTTGGTTGGGAAGTATGGTGATGGAAATGTTCCTATTGCATTGTCACTTGGTTTATTGACGACTCTGACTGCTGGGTTTGCTCTGCTTGGTCGGTCGGGAAAGGGAAGTATCTATACTCCATCAAGACTACCACCCAAACCACTAGAAGTATGGGCATATGAGGGATCCCCTTTTTGCAAACTTGTACGTGAAGTGCTCGTAGAGTTGGAACTGCCTCACTTATACCGCAGCTGTGCTCGTGGCAGCCCAAAACGACAGATACTATATGAGAAAGCCGGACGTTTTCAGGCACCTTACTTGGAAGATCCCAATACTGGGGTGCAAATGTTTGAAAGTGCAGAAATTATTGAATATCTAAAAGCAACTTATGCTCTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

337

Amino Acids

37.3

Weight (kDa)

8.81

Isoelectric Point (pI)

47.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N_3 PF13417 142 - 216 1.2e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 147 - 211 1e-07 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 243
AccB1I GGYRCC 1 cut(s) 919
AccB7I CCANNNNNTGG 3 cut(s) 515, 539, 590
AciI CCGC 4 cut(s) 41, 282, 552, 856
AclWI GGATC 6 cut(s) 325, 575, 588, 789, 802, 929
AcoI YGGCCR 2 cut(s) 3, 401
AcuI CTGAAG 2 cut(s) 123, 989
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 3 cut(s) 605, 629, 816
AfiI CCNNNNNNNGG 7 cut(s) 515, 535, 539, 574, 590, 944, 945
AgsI TTSAA 8 cut(s) 146, 165, 190, 387, 434, 600, 962, 980
AluBI AGCT 3 cut(s) 11, 137, 861
AluI AGCT 3 cut(s) 11, 137, 861
Alw21I GWGCWC 2 cut(s) 828, 868
Alw26I GTCTC 2 cut(s) 107, 374
AlwI GGATC 6 cut(s) 325, 575, 588, 789, 802, 929
AoxI GGCC 3 cut(s) 3, 192, 401
ApeKI GCWGC 3 cut(s) 279, 858, 873
Asp700I GAANNNNTTC 1 cut(s) 563
AspS9I GGNCC 4 cut(s) 193, 395, 481, 518
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 1 cut(s) 659
AvaII GGWCC 3 cut(s) 395, 481, 518
BaeGI GKGCMC 1 cut(s) 509
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 2 cut(s) 580, 794
BanI GGYRCC 1 cut(s) 919
BanII GRGCYC 1 cut(s) 204
BarI GAAGNNNNNNTAC 2 cut(s) 727, 759
BauI CACGAG 1 cut(s) 867
BbsI GAAGAC 1 cut(s) 67
Bbv12I GWGCWC 2 cut(s) 828, 868
BbvI GCAGC 3 cut(s) 266, 870, 885
BccI CCATC 3 cut(s) 541, 644, 757
BceAI ACGGC 1 cut(s) 416
BcnI CCSGG 1 cut(s) 197
BcoDI GTCTC 2 cut(s) 107, 374
BfaI CTAG 1 cut(s) 773
BisI GCNGC 5 cut(s) 280, 283, 553, 859, 874
BlsI GCNGC 5 cut(s) 281, 284, 554, 860, 875
BmcAI AGTACT 1 cut(s) 629
Bme1390I CCNGG 1 cut(s) 197
Bme18I GGWCC 3 cut(s) 395, 481, 518
BmgT120I GGNCC 4 cut(s) 193, 395, 481, 518
BmiI GGNNCC 5 cut(s) 195, 201, 582, 796, 921
BmrFI CCNGG 1 cut(s) 197
BmrI ACTGGG 1 cut(s) 954
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 1 cut(s) 67
BpmI CTGGAG 2 cut(s) 321, 612
BpuMI CCSGG 1 cut(s) 197
BsaAI YACGTR 1 cut(s) 818
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 195, 369, 398
BsaXI ACNNNNNCTCC 2 cut(s) 157, 187
Bsc4I CCNNNNNNNGG 7 cut(s) 515, 535, 539, 574, 590, 944, 945
Bse1I ACTGG 3 cut(s) 343, 595, 949
BseDI CCNNGG 3 cut(s) 195, 369, 398
BseGI GGATG 1 cut(s) 331
BseLI CCNNNNNNNGG 7 cut(s) 515, 535, 539, 574, 590, 944, 945
BseNI ACTGG 3 cut(s) 343, 595, 949
BseSI GKGCMC 1 cut(s) 509
BseXI GCAGC 3 cut(s) 266, 870, 885
BseYI CCCAGC 1 cut(s) 701
BsgI GTGCAG 1 cut(s) 987
Bsh1285I CGRYCG 1 cut(s) 725
BshFI GGCC 3 cut(s) 5, 194, 403
BshNI GGYRCC 1 cut(s) 919
BsiEI CGRYCG 1 cut(s) 725
BsiHKAI GWGCWC 2 cut(s) 828, 868
BsiSI CCGG 3 cut(s) 197, 451, 906
BslFI GGGAC 1 cut(s) 91
BslI CCNNNNNNNGG 7 cut(s) 515, 535, 539, 574, 590, 944, 945
BsmAI GTCTC 2 cut(s) 107, 374
BsmFI GGGAC 1 cut(s) 91
BsnI GGCC 3 cut(s) 5, 194, 403
Bsp1286I GDGCHC 4 cut(s) 204, 509, 828, 868
Bsp143I GATC 4 cut(s) 330, 580, 794, 934
BspACI CCGC 4 cut(s) 41, 282, 552, 856
BspANI GGCC 3 cut(s) 5, 194, 403
BspLI GGNNCC 5 cut(s) 195, 201, 582, 796, 921
BspPI GGATC 6 cut(s) 325, 575, 588, 789, 802, 929
BspQI GCTCTTC 1 cut(s) 1008
BspT107I GGYRCC 1 cut(s) 919
BsrI ACTGG 3 cut(s) 343, 595, 949
BssECI CCNNGG 3 cut(s) 195, 369, 398
BssMI GATC 4 cut(s) 330, 580, 794, 934
BssNI GRCGYC 1 cut(s) 240
BssSI CACGAG 1 cut(s) 867
BssT1I CCWWGG 1 cut(s) 369
Bst2BI CACGAG 1 cut(s) 867
Bst4CI ACNGT 1 cut(s) 210
Bst6I CTCTTC 1 cut(s) 1008
BstACI GRCGYC 1 cut(s) 240
BstAPI GCANNNNNTGC 1 cut(s) 998
BstBAI YACGTR 1 cut(s) 818
BstDSI CCRYGG 1 cut(s) 398
BstF5I GGATG 1 cut(s) 331
BstKTI GATC 4 cut(s) 333, 583, 797, 937
BstMAI GTCTC 2 cut(s) 107, 374
BstMBI GATC 4 cut(s) 330, 580, 794, 934
BstMCI CGRYCG 1 cut(s) 725
BstMWI GCNNNNNNNGC 5 cut(s) 257, 279, 409, 707, 998
BstSCI CCNGG 1 cut(s) 195
BstSLI GKGCMC 1 cut(s) 509
BstV1I GCAGC 3 cut(s) 266, 870, 885
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 4 cut(s) 330, 580, 794, 934
BstYI RGATCY 4 cut(s) 330, 580, 794, 934
BsuRI GGCC 3 cut(s) 5, 194, 403
BtgI CCRYGG 1 cut(s) 398
BtsCI GGATG 1 cut(s) 331
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 2 cut(s) 480, 588
Cfr13I GGNCC 4 cut(s) 193, 395, 481, 518
Csp6I GTAC 3 cut(s) 604, 628, 815
CviAII CATG 2 cut(s) 51, 574
CviQI GTAC 3 cut(s) 604, 628, 815
DpnI GATC 4 cut(s) 332, 582, 796, 936
DpnII GATC 4 cut(s) 330, 580, 794, 934
EaeI YGGCCR 2 cut(s) 3, 401
Eam1104I CTCTTC 1 cut(s) 1008
EarI CTCTTC 1 cut(s) 1008
Eco130I CCWWGG 1 cut(s) 369
Eco24I GRGCYC 1 cut(s) 204
Eco47I GGWCC 3 cut(s) 395, 481, 518
Eco57I CTGAAG 2 cut(s) 123, 989
EcoO109I RGGNCCY 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 369
EcoT38I GRGCYC 1 cut(s) 204
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 2 cut(s) 54, 577
FaqI GGGAC 1 cut(s) 91
FatI CATG 2 cut(s) 50, 573
FauI CCCGC 1 cut(s) 48
FauNDI CATATG 1 cut(s) 787
Fnu4HI GCNGC 5 cut(s) 280, 283, 553, 859, 874
FokI GGATG 1 cut(s) 338
FriOI GRGCYC 1 cut(s) 204
Fsp4HI GCNGC 5 cut(s) 280, 283, 553, 859, 874
FspBI CTAG 1 cut(s) 773
GluI GCNGC 5 cut(s) 280, 283, 553, 859, 874
GsaI CCCAGC 1 cut(s) 705
GsuI CTGGAG 2 cut(s) 321, 612
HaeIII GGCC 3 cut(s) 5, 194, 403
HapII CCGG 3 cut(s) 197, 451, 906
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 2 cut(s) 54, 577
HinfI GANTC 5 cut(s) 104, 216, 365, 608, 691
HpaII CCGG 3 cut(s) 197, 451, 906
HphI GGTGA 1 cut(s) 659
Hpy188I TCNGA 4 cut(s) 215, 221, 613, 696
Hpy188III TCNNGA 4 cut(s) 338, 353, 726, 753
HpyAV CCTTC 3 cut(s) 171, 428, 448
HpyCH4III ACNGT 1 cut(s) 210
HpyCH4IV ACGT 3 cut(s) 240, 817, 910
HpyCH4V TGCA 5 cut(s) 473, 668, 807, 952, 968
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 279, 409, 707, 998
HpySE526I ACGT 3 cut(s) 240, 817, 910
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 2 cut(s) 54, 577
Kzo9I GATC 4 cut(s) 330, 580, 794, 934
LguI GCTCTTC 1 cut(s) 1008
LmnI GCTCC 2 cut(s) 178, 199
Lsp1109I GCAGC 3 cut(s) 266, 870, 885
MaeI CTAG 1 cut(s) 773
MaeII ACGT 3 cut(s) 240, 817, 910
MaeIII GTNAC 1 cut(s) 672
MalI GATC 4 cut(s) 332, 582, 796, 936
MboI GATC 4 cut(s) 330, 580, 794, 934
MboII GAAGA 3 cut(s) 72, 944, 995
MflI RGATCY 4 cut(s) 330, 580, 794, 934
MhlI GDGCHC 4 cut(s) 204, 509, 828, 868
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 184, 389, 465, 972
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 113, 225, 685
MmeI TCCRAC 2 cut(s) 244, 816
MnlI CCTC 4 cut(s) 40, 345, 784, 855
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 563
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 360
MslI CAYNNNNRTG 1 cut(s) 49
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 861
MspI CCGG 3 cut(s) 197, 451, 906
MspR9I CCNGG 1 cut(s) 197
MwoI GCNNNNNNNGC 5 cut(s) 257, 279, 409, 707, 998
NciI CCSGG 1 cut(s) 197
NdeI CATATG 1 cut(s) 787
NdeII GATC 4 cut(s) 330, 580, 794, 934
NlaIII CATG 2 cut(s) 54, 577
NlaIV GGNNCC 5 cut(s) 195, 201, 582, 796, 921
NmuCI GTSAC 1 cut(s) 672
PciSI GCTCTTC 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 1 cut(s) 612
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 2 cut(s) 365, 608
PflMI CCANNNNNTGG 3 cut(s) 515, 539, 590
PkrI GCNGC 5 cut(s) 281, 284, 554, 860, 875
PleI GAGTC 3 cut(s) 112, 224, 685
PpsI GAGTC 3 cut(s) 112, 224, 685
Ppu21I YACGTR 1 cut(s) 818
PspFI CCCAGC 1 cut(s) 701
PspN4I GGNNCC 5 cut(s) 195, 201, 582, 796, 921
PspPI GGNCC 4 cut(s) 193, 395, 481, 518
PsuI RGATCY 4 cut(s) 330, 580, 794, 934
PvuII CAGCTG 1 cut(s) 861
RsaI GTAC 3 cut(s) 605, 629, 816
RsaNI GTAC 3 cut(s) 604, 628, 815
RseI CAYNNNNRTG 1 cut(s) 49
SapI GCTCTTC 1 cut(s) 1008
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 5 cut(s) 280, 283, 553, 859, 874
Sau3AI GATC 4 cut(s) 330, 580, 794, 934
Sau96I GGNCC 4 cut(s) 193, 395, 481, 518
ScaI AGTACT 1 cut(s) 629
SchI GAGTC 3 cut(s) 113, 225, 685
ScrFI CCNGG 1 cut(s) 197
SduI GDGCHC 4 cut(s) 204, 509, 828, 868
SinI GGWCC 3 cut(s) 395, 481, 518
SmiMI CAYNNNNRTG 1 cut(s) 49
Sse9I AATT 4 cut(s) 184, 389, 465, 972
SsiI CCGC 4 cut(s) 41, 282, 552, 856
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 1 cut(s) 195
StyI CCWWGG 1 cut(s) 369
TaaI ACNGT 1 cut(s) 210
TaiI ACGT 3 cut(s) 243, 820, 913
TaqI TCGA 1 cut(s) 354
TaqII GACCGA 1 cut(s) 711
TasI AATT 4 cut(s) 184, 389, 465, 972
TatI WGTACW 1 cut(s) 627
TauI GCSGC 2 cut(s) 285, 555
TfiI GAWTC 2 cut(s) 365, 608
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TscAI CASTG 2 cut(s) 480, 595
TseFI GTSAC 1 cut(s) 672
TseI GCWGC 3 cut(s) 279, 858, 873
Tsp45I GTSAC 1 cut(s) 672
TspDTI ATGAA 1 cut(s) 39
TspGWI ACGGA 2 cut(s) 492, 518
TspRI CASTG 2 cut(s) 480, 595
Van91I CCANNNNNTGG 3 cut(s) 515, 539, 590
VpaK11BI GGWCC 3 cut(s) 395, 481, 518
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 563
XspI CTAG 1 cut(s) 773
ZraI GACGTC 1 cut(s) 241
ZrmI AGTACT 1 cut(s) 629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.