Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0007313

Physical Location & Seq

Genomic Coordinates Forward (+)

2110933 .. 2114751

Gene Structure 3819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1023500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGCCAAAGCTCTAAACTTAATTAACCATGCAATTTTCCCGCCTTTTTCATCCCCTACAACTGCAATACCCAGGAGGAATTTCTGCATTGTTAGAGCTTCAACAGAGTCCTCTGAGACCCCCCAAACTTCAGCTTCTGTTCAAACCAAACCAGAACCTTCATCGCCGCCGGTAACATTTGCTCCTCCGCCCAATTTCAAGCCGCCGGAGCCAAAGCGGTTCGGTGTCAGGCCTGATAAAGTTTGGGACATCTTGGGGGCTTCTCTTGCCTTGTTCTTCCGGTTGGGGACTGGCGTTTTCGTTTCTGGGTATTCTTTCTCTTTCGTTCCGAAAGATGATATTCCTGCGGACCAGTATGCTCTCGAGTACAATGATTCTAAGGTCAAAGAGACTTCGAAAGTAGGCCCTCGCCCGGTGAAGCCTATTGAGATATATGAGTTTGAAGGCTGCCCATTCTGCCGTAAGGTTAGGGAAATCGTTGCAGTATTGGACCTCGATGTTCTATTTTATCCTTGCCCGAAAGGTGGTCCAAATTTTCGTCGCAAGGTTGTTGAGATGGGTGGAAAACAGCAGTTCCCTTACATGGTGGATCCGAACACTGGAGTTTCAATGTATGAATCCGATGACATAATCAAGTACTTGGTTGGGAAGTATGGTGATGGAACTGTTCCTCTTGCACTGTCACTTGGTTTATTAACGACTTTGACTGCAGGCTTTGCTTTGATTGGTCGTTCGGGAAAGGGTTCTAGCTATTCTCCATCAAAACTACCACCCAAACCACTTGTAGTCTGGGCATATGAGGGATCGCCTTTCTGCAAAATTGCGCGTGAAGTACTTGTTGAGTTAGAACTGCCTCACATATATCGCAGCTGTGCTCGTGGCAGTCCAAAACGACAAATACTGTTTGACAAAACCGGACGTTTTCAGGCTCCTTACTTAGAAGATCCAAATACGGGGGTGGAAATGTTCGAAAGTGCAGAAATTGCAGAATATCTAAGAGCAACGTATGCTCTGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GST_N_3

Protein Analysis

340

Amino Acids

37.48

Weight (kDa)

8.73

Isoelectric Point (pI)

50.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GST_N_3	PF13417	145 - 219	2.3e-16	Glutathione S-transferase, N-terminal domain
GST_N_3	PF13417	266 - 337	9e-10	Glutathione S-transferase, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03880
fragaria_vesca	FvH4_6g18820 FvH4_6g18820 FvH4_6g18820 FvH4_6g18820 FvH4_6g18820 FvH4_6g18820 FvH4_6g18820
malus_domestica	MD12G1036800.v1.1 MD14G1023500.v1.1
prunus_persica	Prupe.7G109400_v2.0.a1 Prupe.7G109400_v2.0.a1 Prupe.7G109400_v2.0.a1
pyrus_communis	pycom12g02420 pycom14g02240
rosa_chinensis	RchiOBHm_Chr3g0473831
rosa_laevigata	RLG00000023980
rosa_multiflora	Rmu_sc0005561.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407740
rosa_rugosa	Rorug03G0135800
rosa_samantha	Rh3AG186300 Rh3BG214900 Rh3CG211600 Rh3DG210700
rosa_wichuraiana	Rw3G017040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	826
AciI	CCGC	6 cut(s)	41, 167, 188, 203, 217, 347
AclWI	GGATC	4 cut(s)	584, 597, 811, 938
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	79, 532
AcuI	CTGAAG	1 cut(s)	114
AfaI	GTAC	3 cut(s)	368, 638, 834
AfiI	CCNNNNNNNGG	5 cut(s)	412, 524, 583, 599, 953
AgsI	TTSAA	5 cut(s)	102, 143, 199, 443, 609
AjnI	CCWGG	1 cut(s)	71
AluBI	AGCT	5 cut(s)	11, 98, 134, 750, 870
AluI	AGCT	5 cut(s)	11, 98, 134, 750, 870
Alw21I	GWGCWC	1 cut(s)	877
Alw26I	GTCTC	2 cut(s)	110, 383
AlwI	GGATC	4 cut(s)	584, 597, 811, 938
AlwNI	CAGNNNCTG	1 cut(s)	137
Ama87I	CYCGRG	1 cut(s)	362
AoxI	GGCC	3 cut(s)	3, 230, 403
ApeKI	GCWGC	2 cut(s)	447, 867
ApoI	RAATTY	2 cut(s)	79, 532
Asp700I	GAANNNNTTC	1 cut(s)	742
AspLEI	GCGC	1 cut(s)	826
AspS9I	GGNCC	4 cut(s)	349, 404, 490, 527
AsuC2I	CCSGG	1 cut(s)	413
AsuHPI	GGTGA	2 cut(s)	427, 668
AsuII	TTCGAA	2 cut(s)	395, 969
AvaI	CYCGRG	1 cut(s)	362
AvaII	GGWCC	3 cut(s)	349, 490, 527
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	589
BauI	CACGAG	1 cut(s)	876
Bbv12I	GWGCWC	1 cut(s)	877
BbvI	GCAGC	2 cut(s)	434, 879
BccI	CCATC	3 cut(s)	550, 653, 766
BceAI	ACGGC	1 cut(s)	444
BciT130I	CCWGG	1 cut(s)	73
BcnI	CCSGG	1 cut(s)	413
BcoDI	GTCTC	2 cut(s)	110, 383
BfaI	CTAG	1 cut(s)	747
BfmI	CTRYAG	2 cut(s)	708, 1013
BisI	GCNGC	4 cut(s)	167, 203, 448, 868
BlsI	GCNGC	4 cut(s)	168, 204, 449, 869
BmcAI	AGTACT	2 cut(s)	638, 834
Bme1390I	CCNGG	2 cut(s)	73, 413
Bme18I	GGWCC	3 cut(s)	349, 490, 527
BmeT110I	CYCGRG	1 cut(s)	362
BmgT120I	GGNCC	4 cut(s)	349, 404, 490, 527
BmiI	GGNNCC	3 cut(s)	210, 591, 930
BmrFI	CCNGG	2 cut(s)	73, 413
BpmI	CTGGAG	1 cut(s)	621
Bpu14I	TTCGAA	2 cut(s)	395, 969
BpuMI	CCSGG	1 cut(s)	413
BsaI	GGTCTC	1 cut(s)	110
BsaJI	CCNNGG	1 cut(s)	71
BsaWI	WCCGGW	2 cut(s)	279, 914
BsaXI	ACNNNNNCTCC	2 cut(s)	166, 196
Bsc4I	CCNNNNNNNGG	5 cut(s)	412, 524, 583, 599, 953
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	3 cut(s)	295, 352, 604
BseBI	CCWGG	1 cut(s)	73
BseDI	CCNNGG	1 cut(s)	71
BseGI	GGATG	1 cut(s)	50
BseLI	CCNNNNNNNGG	5 cut(s)	412, 524, 583, 599, 953
BseMII	CTCAG	1 cut(s)	105
BseNI	ACTGG	3 cut(s)	295, 352, 604
BseRI	GAGGAG	1 cut(s)	174
BseXI	GCAGC	2 cut(s)	434, 879
BsgI	GTGCAG	1 cut(s)	996
Bsh1236I	CGCG	1 cut(s)	826
BshFI	GGCC	3 cut(s)	5, 232, 405
BsiHKAI	GWGCWC	1 cut(s)	877
BsiHKCI	CYCGRG	1 cut(s)	362
BsiSI	CCGG	5 cut(s)	170, 206, 280, 413, 915
BslFI	GGGAC	2 cut(s)	260, 301
BslI	CCNNNNNNNGG	5 cut(s)	412, 524, 583, 599, 953
BsmAI	GTCTC	2 cut(s)	110, 383
BsmFI	GGGAC	2 cut(s)	260, 301
BsnI	GGCC	3 cut(s)	5, 232, 405
Bso31I	GGTCTC	1 cut(s)	110
BsoBI	CYCGRG	1 cut(s)	362
Bsp119I	TTCGAA	2 cut(s)	395, 969
Bsp1286I	GDGCHC	1 cut(s)	877
Bsp143I	GATC	3 cut(s)	589, 803, 943
BspACI	CCGC	6 cut(s)	41, 167, 188, 203, 217, 347
BspANI	GGCC	3 cut(s)	5, 232, 405
BspCNI	CTCAG	1 cut(s)	106
BspFNI	CGCG	1 cut(s)	826
BspLI	GGNNCC	3 cut(s)	210, 591, 930
BspMAI	CTGCAG	2 cut(s)	712, 1017
BspPI	GGATC	4 cut(s)	584, 597, 811, 938
BspT104I	TTCGAA	2 cut(s)	395, 969
BspTNI	GGTCTC	1 cut(s)	110
BsrFI	RCCGGY	1 cut(s)	169
BsrI	ACTGG	3 cut(s)	295, 352, 604
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	1 cut(s)	71
BssMI	GATC	3 cut(s)	589, 803, 943
BssSI	CACGAG	1 cut(s)	876
Bst2BI	CACGAG	1 cut(s)	876
Bst2UI	CCWGG	1 cut(s)	73
Bst4CI	ACNGT	3 cut(s)	667, 681, 903
BstAPI	GCANNNNNTGC	3 cut(s)	716, 983, 1007
BstBI	TTCGAA	2 cut(s)	395, 969
BstC8I	GCNNGC	1 cut(s)	712
BstDEI	CTNAG	4 cut(s)	114, 378, 937, 995
BstF5I	GGATG	1 cut(s)	50
BstFNI	CGCG	1 cut(s)	826
BstHHI	GCGC	1 cut(s)	826
BstKTI	GATC	3 cut(s)	592, 806, 946
BstMAI	GTCTC	2 cut(s)	110, 383
BstMBI	GATC	3 cut(s)	589, 803, 943
BstMWI	GCNNNNNNNGC	6 cut(s)	208, 266, 456, 716, 983, 1007
BstNI	CCWGG	1 cut(s)	73
BstSCI	CCNGG	2 cut(s)	71, 411
BstSFI	CTRYAG	2 cut(s)	708, 1013
BstUI	CGCG	1 cut(s)	826
BstV1I	GCAGC	2 cut(s)	434, 879
BstX2I	RGATCY	2 cut(s)	589, 943
BstYI	RGATCY	2 cut(s)	589, 943
BsuRI	GGCC	3 cut(s)	5, 232, 405
BtgZI	GCGATG	1 cut(s)	147
BtsCI	GGATG	1 cut(s)	50
BtsIMutI	CAGTG	2 cut(s)	597, 677
Cac8I	GCNNGC	1 cut(s)	712
CaiI	CAGNNNCTG	1 cut(s)	137
CfoI	GCGC	1 cut(s)	826
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	4 cut(s)	349, 404, 490, 527
Csp6I	GTAC	3 cut(s)	367, 637, 833
CviAII	CATG	2 cut(s)	29, 583
CviQI	GTAC	3 cut(s)	367, 637, 833
DdeI	CTNAG	4 cut(s)	114, 378, 937, 995
DpnI	GATC	3 cut(s)	591, 805, 945
DpnII	GATC	3 cut(s)	589, 803, 943
EaeI	YGGCCR	1 cut(s)	3
EciI	GGCGGA	1 cut(s)	177
Eco147I	AGGCCT	1 cut(s)	232
Eco31I	GGTCTC	1 cut(s)	110
Eco47I	GGWCC	3 cut(s)	349, 490, 527
Eco57I	CTGAAG	1 cut(s)	114
Eco88I	CYCGRG	1 cut(s)	362
EcoO109I	RGGNCCY	1 cut(s)	404
EcoRII	CCWGG	1 cut(s)	71
FaeI	CATG	2 cut(s)	32, 586
FaqI	GGGAC	2 cut(s)	260, 301
FatI	CATG	2 cut(s)	28, 582
FauI	CCCGC	1 cut(s)	48
FauNDI	CATATG	1 cut(s)	796
Fnu4HI	GCNGC	4 cut(s)	167, 203, 448, 868
FokI	GGATG	1 cut(s)	37
Fsp4HI	GCNGC	4 cut(s)	167, 203, 448, 868
FspBI	CTAG	1 cut(s)	747
GlaI	GCGC	1 cut(s)	825
GluI	GCNGC	4 cut(s)	167, 203, 448, 868
GsuI	CTGGAG	1 cut(s)	621
HaeIII	GGCC	3 cut(s)	5, 232, 405
HapII	CCGG	5 cut(s)	170, 206, 280, 413, 915
HhaI	GCGC	1 cut(s)	826
Hin1II	CATG	2 cut(s)	32, 586
Hin6I	GCGC	1 cut(s)	824
HinP1I	GCGC	1 cut(s)	824
HinfI	GANTC	3 cut(s)	107, 374, 617
HpaII	CCGG	5 cut(s)	170, 206, 280, 413, 915
HphI	GGTGA	2 cut(s)	427, 668
Hpy188I	TCNGA	4 cut(s)	115, 330, 594, 622
Hpy188III	TCNNGA	2 cut(s)	362, 735
Hpy99I	CGWCG	1 cut(s)	543
HpyAV	CCTTC	2 cut(s)	168, 437
HpyCH4III	ACNGT	3 cut(s)	667, 681, 903
HpyCH4IV	ACGT	2 cut(s)	919, 1004
HpyF10VI	GCNNNNNNNGC	6 cut(s)	208, 266, 456, 716, 983, 1007
HpyF3I	CTNAG	4 cut(s)	114, 378, 937, 995
HpySE526I	ACGT	2 cut(s)	919, 1004
Hsp92II	CATG	2 cut(s)	32, 586
HspAI	GCGC	1 cut(s)	824
Kzo9I	GATC	3 cut(s)	589, 803, 943
LmnI	GCTCC	3 cut(s)	187, 208, 934
Lsp1109I	GCAGC	2 cut(s)	434, 879
MaeI	CTAG	1 cut(s)	747
MaeII	ACGT	2 cut(s)	919, 1004
MaeIII	GTNAC	2 cut(s)	172, 681
MalI	GATC	3 cut(s)	591, 805, 945
MboI	GATC	3 cut(s)	589, 803, 943
MboII	GAAGA	2 cut(s)	268, 953
MflI	RGATCY	2 cut(s)	589, 943
MhlI	GDGCHC	1 cut(s)	877
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	21, 33, 79, 193, 532, 819, 981
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	116
MnlI	CCTC	8 cut(s)	69, 121, 195, 417, 503, 681, 793, 864
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	742
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	20, 24, 695
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	870
MspI	CCGG	5 cut(s)	170, 206, 280, 413, 915
MspR9I	CCNGG	2 cut(s)	73, 413
MvaI	CCWGG	1 cut(s)	73
MvnI	CGCG	1 cut(s)	826
MwoI	GCNNNNNNNGC	6 cut(s)	208, 266, 456, 716, 983, 1007
NciI	CCSGG	1 cut(s)	413
NdeI	CATATG	1 cut(s)	796
NdeII	GATC	3 cut(s)	589, 803, 943
NlaIII	CATG	2 cut(s)	32, 586
NlaIV	GGNNCC	3 cut(s)	210, 591, 930
NmuCI	GTSAC	1 cut(s)	681
NspV	TTCGAA	2 cut(s)	395, 969
PacI	TTAATTAA	1 cut(s)	24
PaeR7I	CTCGAG	1 cut(s)	362
PceI	AGGCCT	1 cut(s)	232
PdmI	GAANNNNTTC	1 cut(s)	742
PfeI	GAWTC	2 cut(s)	374, 617
PkrI	GCNGC	4 cut(s)	168, 204, 449, 869
PleI	GAGTC	1 cut(s)	115
PpsI	GAGTC	1 cut(s)	115
Psp6I	CCWGG	1 cut(s)	71
PspGI	CCWGG	1 cut(s)	71
PspN4I	GGNNCC	3 cut(s)	210, 591, 930
PspPI	GGNCC	4 cut(s)	349, 404, 490, 527
PstI	CTGCAG	2 cut(s)	712, 1017
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	2 cut(s)	589, 943
PvuII	CAGCTG	1 cut(s)	870
RsaI	GTAC	3 cut(s)	368, 638, 834
RsaNI	GTAC	3 cut(s)	367, 637, 833
SaqAI	TTAA	3 cut(s)	20, 24, 695
SatI	GCNGC	4 cut(s)	167, 203, 448, 868
Sau3AI	GATC	3 cut(s)	589, 803, 943
Sau96I	GGNCC	4 cut(s)	349, 404, 490, 527
ScaI	AGTACT	2 cut(s)	638, 834
SchI	GAGTC	1 cut(s)	116
ScrFI	CCNGG	2 cut(s)	73, 413
SduI	GDGCHC	1 cut(s)	877
SfcI	CTRYAG	2 cut(s)	708, 1013
Sfr274I	CTCGAG	1 cut(s)	362
SfuI	TTCGAA	2 cut(s)	395, 969
SinI	GGWCC	3 cut(s)	349, 490, 527
SlaI	CTCGAG	1 cut(s)	362
SmlI	CTYRAG	1 cut(s)	362
SmoI	CTYRAG	1 cut(s)	362
Sse9I	AATT	7 cut(s)	21, 33, 79, 193, 532, 819, 981
SseBI	AGGCCT	1 cut(s)	232
SsiI	CCGC	6 cut(s)	41, 167, 188, 203, 217, 347
SspMI	CTAG	1 cut(s)	747
StuI	AGGCCT	1 cut(s)	232
StyD4I	CCNGG	2 cut(s)	71, 411
TaaI	ACNGT	3 cut(s)	667, 681, 903
TaiI	ACGT	2 cut(s)	922, 1007
TaqI	TCGA	4 cut(s)	363, 395, 495, 969
TasI	AATT	7 cut(s)	21, 33, 79, 193, 532, 819, 981
TatI	WGTACW	3 cut(s)	366, 636, 832
TauI	GCSGC	2 cut(s)	169, 205
TfiI	GAWTC	2 cut(s)	374, 617
Tru1I	TTAA	3 cut(s)	20, 24, 695
Tru9I	TTAA	3 cut(s)	20, 24, 695
TscAI	CASTG	2 cut(s)	604, 684
TseFI	GTSAC	1 cut(s)	681
TseI	GCWGC	2 cut(s)	447, 867
Tsp45I	GTSAC	1 cut(s)	681
TspDTI	ATGAA	3 cut(s)	39, 150, 630
TspRI	CASTG	2 cut(s)	604, 684
VpaK11BI	GGWCC	3 cut(s)	349, 490, 527
XapI	RAATTY	2 cut(s)	79, 532
XcmI	CCANNNNNNNNNTGG	1 cut(s)	786
XhoI	CTCGAG	1 cut(s)	362
XmnI	GAANNNNTTC	1 cut(s)	742
XspI	CTAG	1 cut(s)	747
ZrmI	AGTACT	2 cut(s)	638, 834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.