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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G58480 |
| fragaria_vesca | FvH4_6g21330 FvH4_6g21330 FvH4_6g21330 |
| malus_domestica | MD12G1050400.v1.1 MD14G1048900.v1.1 |
| prunus_persica | Prupe.7G086400_v2.0.a1 |
| pyrus_communis | pycom12g04490 pycom14g04000 |
| rosa_chinensis | RchiOBHm_Chr3g0477941 |
| rosa_laevigata | RLG00000023678 |
| rosa_multiflora | Rmu_sc0005991.1_g000009 Rmu_sc0028100.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00403580 |
| rosa_rugosa | Rorug03G0164000 |
| rosa_samantha | Rh3AG214800 Rh3BG248400 Rh3CG242400 Rh3DG241800 |
| rosa_wichuraiana | Rw3G019360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 3 cut(s) | 327, 456, 585 |
| AccB1I | GGYRCC | 3 cut(s) | 327, 456, 585 |
| AccII | CGCG | 2 cut(s) | 47, 1659 |
| AccIII | TCCGGA | 1 cut(s) | 627 |
| AciI | CCGC | 3 cut(s) | 116, 709, 1224 |
| AclI | AACGTT | 1 cut(s) | 1371 |
| AclWI | GGATC | 4 cut(s) | 475, 857, 1368, 1931 |
| AcsI | RAATTY | 5 cut(s) | 1266, 1318, 1328, 1678, 1864 |
| AcuI | CTGAAG | 2 cut(s) | 1509, 1932 |
| AfaI | GTAC | 9 cut(s) | 61, 329, 458, 587, 617, 1195, 1871, 2014, 2108 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 873, 1292, 1925, 2069 |
| AgsI | TTSAA | 8 cut(s) | 1007, 1202, 1209, 1518, 1604, 1628, 1677, 1958 |
| AjiI | CACGTC | 1 cut(s) | 1621 |
| AjnI | CCWGG | 3 cut(s) | 201, 330, 1609 |
| Alw21I | GWGCWC | 4 cut(s) | 716, 1511, 1895, 1907 |
| Alw26I | GTCTC | 3 cut(s) | 269, 527, 1992 |
| AlwI | GGATC | 4 cut(s) | 475, 857, 1368, 1931 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1913 |
| Aor13HI | TCCGGA | 1 cut(s) | 627 |
| AoxI | GGCC | 5 cut(s) | 1030, 1120, 1283, 1915, 1994 |
| ApeKI | GCWGC | 6 cut(s) | 206, 335, 593, 785, 841, 1972 |
| ApoI | RAATTY | 5 cut(s) | 1266, 1318, 1328, 1678, 1864 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1665, 1864 |
| Asp718I | GGTACC | 3 cut(s) | 327, 456, 585 |
| AspA2I | CCTAGG | 1 cut(s) | 1919 |
| AspS9I | GGNCC | 3 cut(s) | 1031, 1121, 1916 |
| AsuC2I | CCSGG | 2 cut(s) | 1034, 1964 |
| AsuHPI | GGTGA | 4 cut(s) | 78, 317, 333, 462 |
| AsuII | TTCGAA | 1 cut(s) | 152 |
| AvrII | CCTAGG | 1 cut(s) | 1919 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 311, 344, 569, 602 |
| BanI | GGYRCC | 3 cut(s) | 327, 456, 585 |
| BanII | GRGCYC | 1 cut(s) | 716 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 67, 99, 1067, 1099, 1996, 2028 |
| BbsI | GAAGAC | 1 cut(s) | 643 |
| Bbv12I | GWGCWC | 4 cut(s) | 716, 1511, 1895, 1907 |
| BbvI | GCAGC | 6 cut(s) | 193, 322, 580, 772, 853, 1984 |
| BccI | CCATC | 3 cut(s) | 669, 1700, 2017 |
| BciT130I | CCWGG | 3 cut(s) | 203, 332, 1611 |
| BcnI | CCSGG | 2 cut(s) | 1034, 1964 |
| BcoDI | GTCTC | 3 cut(s) | 269, 527, 1992 |
| BfaI | CTAG | 2 cut(s) | 689, 1920 |
| BfmI | CTRYAG | 1 cut(s) | 1970 |
| BisI | GCNGC | 6 cut(s) | 207, 336, 594, 786, 842, 1973 |
| BlnI | CCTAGG | 1 cut(s) | 1919 |
| BlsI | GCNGC | 6 cut(s) | 208, 337, 595, 787, 843, 1974 |
| BmcAI | AGTACT | 1 cut(s) | 2014 |
| Bme1390I | CCNGG | 5 cut(s) | 203, 332, 1034, 1611, 1964 |
| BmgBI | CACGTC | 1 cut(s) | 1621 |
| BmgT120I | GGNCC | 3 cut(s) | 1031, 1121, 1916 |
| BmiI | GGNNCC | 7 cut(s) | 200, 329, 458, 587, 914, 1123, 1228 |
| BmrFI | CCNGG | 5 cut(s) | 203, 332, 1034, 1611, 1964 |
| BmsI | GCATC | 6 cut(s) | 218, 347, 416, 1026, 1434, 1777 |
| BpiI | GAAGAC | 1 cut(s) | 643 |
| BpmI | CTGGAG | 2 cut(s) | 157, 415 |
| Bpu14I | TTCGAA | 1 cut(s) | 152 |
| BpuEI | CTTGAG | 1 cut(s) | 689 |
| BpuMI | CCSGG | 2 cut(s) | 1034, 1964 |
| BsaJI | CCNNGG | 7 cut(s) | 789, 992, 1161, 1445, 1919, 1991, 2018 |
| BsaWI | WCCGGW | 4 cut(s) | 302, 627, 1570, 2069 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 873, 1292, 1925, 2069 |
| Bse1I | ACTGG | 8 cut(s) | 174, 432, 469, 553, 561, 1873, 1997, 2063 |
| Bse3DI | GCAATG | 1 cut(s) | 129 |
| BseAI | TCCGGA | 1 cut(s) | 627 |
| BseBI | CCWGG | 3 cut(s) | 203, 332, 1611 |
| BseDI | CCNNGG | 7 cut(s) | 789, 992, 1161, 1445, 1919, 1991, 2018 |
| BseGI | GGATG | 2 cut(s) | 1396, 2028 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 873, 1292, 1925, 2069 |
| BseMI | GCAATG | 1 cut(s) | 129 |
| BseMII | CTCAG | 3 cut(s) | 464, 1707, 1730 |
| BseNI | ACTGG | 8 cut(s) | 174, 432, 469, 553, 561, 1873, 1997, 2063 |
| BseRI | GAGGAG | 4 cut(s) | 160, 289, 1542, 2007 |
| BseXI | GCAGC | 6 cut(s) | 193, 322, 580, 772, 853, 1984 |
| BsgI | GTGCAG | 1 cut(s) | 1560 |
| Bsh1236I | CGCG | 2 cut(s) | 47, 1659 |
| BshFI | GGCC | 5 cut(s) | 1032, 1122, 1285, 1917, 1996 |
| BshNI | GGYRCC | 3 cut(s) | 327, 456, 585 |
| BsiHKAI | GWGCWC | 4 cut(s) | 716, 1511, 1895, 1907 |
| BsiSI | CCGG | 6 cut(s) | 303, 628, 1034, 1571, 1963, 2070 |
| BslFI | GGGAC | 2 cut(s) | 199, 1952 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 873, 1292, 1925, 2069 |
| BsmAI | GTCTC | 3 cut(s) | 269, 527, 1992 |
| BsmFI | GGGAC | 2 cut(s) | 199, 1952 |
| BsnI | GGCC | 5 cut(s) | 1032, 1122, 1285, 1917, 1996 |
| Bsp119I | TTCGAA | 1 cut(s) | 152 |
| Bsp1286I | GDGCHC | 4 cut(s) | 716, 1511, 1895, 1907 |
| Bsp13I | TCCGGA | 1 cut(s) | 627 |
| Bsp1407I | TGTACA | 1 cut(s) | 615 |
| Bsp143I | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| Bsp68I | TCGCGA | 1 cut(s) | 1659 |
| BspACI | CCGC | 3 cut(s) | 116, 709, 1224 |
| BspANI | GGCC | 5 cut(s) | 1032, 1122, 1285, 1917, 1996 |
| BspCNI | CTCAG | 3 cut(s) | 463, 1706, 1731 |
| BspEI | TCCGGA | 1 cut(s) | 627 |
| BspFNI | CGCG | 2 cut(s) | 47, 1659 |
| BspLI | GGNNCC | 7 cut(s) | 200, 329, 458, 587, 914, 1123, 1228 |
| BspMAI | CTGCAG | 1 cut(s) | 1974 |
| BspPI | GGATC | 4 cut(s) | 475, 857, 1368, 1931 |
| BspQI | GCTCTTC | 2 cut(s) | 562, 1178 |
| BspT104I | TTCGAA | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 3 cut(s) | 327, 456, 585 |
| BsrDI | GCAATG | 1 cut(s) | 129 |
| BsrGI | TGTACA | 1 cut(s) | 615 |
| BsrI | ACTGG | 8 cut(s) | 174, 432, 469, 553, 561, 1873, 1997, 2063 |
| BssECI | CCNNGG | 7 cut(s) | 789, 992, 1161, 1445, 1919, 1991, 2018 |
| BssMI | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| BssT1I | CCWWGG | 4 cut(s) | 789, 1161, 1919, 1991 |
| Bst2UI | CCWGG | 3 cut(s) | 203, 332, 1611 |
| Bst4CI | ACNGT | 6 cut(s) | 920, 1094, 1292, 1498, 1538, 2106 |
| Bst6I | CTCTTC | 4 cut(s) | 562, 961, 1178, 1497 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 653 |
| BstAUI | TGTACA | 1 cut(s) | 615 |
| BstBI | TTCGAA | 1 cut(s) | 152 |
| BstC8I | GCNNGC | 4 cut(s) | 645, 1222, 1915, 1977 |
| BstDEI | CTNAG | 5 cut(s) | 450, 810, 1151, 1693, 1739 |
| BstDSI | CCRYGG | 1 cut(s) | 1445 |
| BstF5I | GGATG | 2 cut(s) | 1396, 2028 |
| BstFNI | CGCG | 2 cut(s) | 47, 1659 |
| BstKTI | GATC | 4 cut(s) | 470, 865, 1363, 1926 |
| BstMAI | GTCTC | 3 cut(s) | 269, 527, 1992 |
| BstMBI | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 653, 1226, 1410 |
| BstNI | CCWGG | 3 cut(s) | 203, 332, 1611 |
| BstNSI | RCATGY | 2 cut(s) | 990, 1386 |
| BstSCI | CCNGG | 5 cut(s) | 201, 330, 1032, 1609, 1962 |
| BstSFI | CTRYAG | 1 cut(s) | 1970 |
| BstUI | CGCG | 2 cut(s) | 47, 1659 |
| BstV1I | GCAGC | 6 cut(s) | 193, 322, 580, 772, 853, 1984 |
| BstV2I | GAAGAC | 1 cut(s) | 643 |
| BstX2I | RGATCY | 1 cut(s) | 1360 |
| BstYI | RGATCY | 1 cut(s) | 1360 |
| BsuRI | GGCC | 5 cut(s) | 1032, 1122, 1285, 1917, 1996 |
| BtgI | CCRYGG | 1 cut(s) | 1445 |
| BtrI | CACGTC | 1 cut(s) | 1621 |
| BtsCI | GGATG | 2 cut(s) | 1396, 2028 |
| BtsIMutI | CAGTG | 9 cut(s) | 181, 439, 568, 916, 1099, 1297, 1503, 1509, 2070 |
| BtuMI | TCGCGA | 1 cut(s) | 1659 |
| Cac8I | GCNNGC | 4 cut(s) | 645, 1222, 1915, 1977 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1913 |
| Cfr13I | GGNCC | 3 cut(s) | 1031, 1121, 1916 |
| Csp6I | GTAC | 9 cut(s) | 60, 328, 457, 586, 616, 1194, 1870, 2013, 2107 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 645, 680, 1075, 1110 |
| CviAII | CATG | 6 cut(s) | 980, 987, 1383, 1756, 1834, 1933 |
| CviQI | GTAC | 9 cut(s) | 60, 328, 457, 586, 616, 1194, 1870, 2013, 2107 |
| DdeI | CTNAG | 5 cut(s) | 450, 810, 1151, 1693, 1739 |
| DpnI | GATC | 4 cut(s) | 469, 864, 1362, 1925 |
| DpnII | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| Eam1104I | CTCTTC | 4 cut(s) | 562, 961, 1178, 1497 |
| EarI | CTCTTC | 4 cut(s) | 562, 961, 1178, 1497 |
| EciI | GGCGGA | 1 cut(s) | 1239 |
| Ecl136II | GAGCTC | 1 cut(s) | 714 |
| Eco130I | CCWWGG | 4 cut(s) | 789, 1161, 1919, 1991 |
| Eco24I | GRGCYC | 1 cut(s) | 716 |
| Eco53kI | GAGCTC | 1 cut(s) | 714 |
| Eco57I | CTGAAG | 2 cut(s) | 1509, 1932 |
| EcoICRI | GAGCTC | 1 cut(s) | 714 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1121 |
| EcoRI | GAATTC | 2 cut(s) | 1266, 1864 |
| EcoRII | CCWGG | 3 cut(s) | 201, 330, 1609 |
| EcoT14I | CCWWGG | 4 cut(s) | 789, 1161, 1919, 1991 |
| EcoT22I | ATGCAT | 1 cut(s) | 1019 |
| EcoT38I | GRGCYC | 1 cut(s) | 716 |
| ErhI | CCWWGG | 4 cut(s) | 789, 1161, 1919, 1991 |
| FaeI | CATG | 6 cut(s) | 983, 990, 1386, 1759, 1837, 1936 |
| FaqI | GGGAC | 2 cut(s) | 199, 1952 |
| FatI | CATG | 6 cut(s) | 979, 986, 1382, 1755, 1833, 1932 |
| FauI | CCCGC | 1 cut(s) | 109 |
| Fnu4HI | GCNGC | 6 cut(s) | 207, 336, 594, 786, 842, 1973 |
| FokI | GGATG | 2 cut(s) | 1403, 2035 |
| FriOI | GRGCYC | 1 cut(s) | 716 |
| Fsp4HI | GCNGC | 6 cut(s) | 207, 336, 594, 786, 842, 1973 |
| FspBI | CTAG | 2 cut(s) | 689, 1920 |
| GluI | GCNGC | 6 cut(s) | 207, 336, 594, 786, 842, 1973 |
| GsuI | CTGGAG | 2 cut(s) | 157, 415 |
| HaeIII | GGCC | 5 cut(s) | 1032, 1122, 1285, 1917, 1996 |
| HapII | CCGG | 6 cut(s) | 303, 628, 1034, 1571, 1963, 2070 |
| Hin1II | CATG | 6 cut(s) | 983, 990, 1386, 1759, 1837, 1936 |
| HindIII | AAGCTT | 1 cut(s) | 1001 |
| HpaII | CCGG | 6 cut(s) | 303, 628, 1034, 1571, 1963, 2070 |
| HphI | GGTGA | 4 cut(s) | 78, 317, 333, 462 |
| Hpy166II | GTNNAC | 5 cut(s) | 616, 830, 929, 1850, 2109 |
| Hpy188I | TCNGA | 9 cut(s) | 10, 453, 1430, 1436, 1690, 1696, 1702, 1951, 2022 |
| Hpy188III | TCNNGA | 6 cut(s) | 628, 1106, 1346, 1563, 1658, 1670 |
| Hpy8I | GTNNAC | 5 cut(s) | 616, 830, 929, 1850, 2109 |
| HpyAV | CCTTC | 8 cut(s) | 43, 676, 946, 1352, 1391, 1484, 1568, 1956 |
| HpyCH4III | ACNGT | 6 cut(s) | 920, 1094, 1292, 1498, 1538, 2106 |
| HpyCH4IV | ACGT | 3 cut(s) | 1356, 1371, 1620 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 653, 1226, 1410 |
| HpyF3I | CTNAG | 5 cut(s) | 450, 810, 1151, 1693, 1739 |
| HpySE526I | ACGT | 3 cut(s) | 1356, 1371, 1620 |
| Hsp92II | CATG | 6 cut(s) | 983, 990, 1386, 1759, 1837, 1936 |
| Kpn2I | TCCGGA | 1 cut(s) | 627 |
| KpnI | GGTACC | 3 cut(s) | 331, 460, 589 |
| Kzo9I | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| LguI | GCTCTTC | 2 cut(s) | 562, 1178 |
| LmnI | GCTCC | 7 cut(s) | 119, 667, 711, 918, 1226, 1902, 1910 |
| Lsp1109I | GCAGC | 6 cut(s) | 193, 322, 580, 772, 853, 1984 |
| LweI | GCATC | 6 cut(s) | 218, 347, 416, 1026, 1434, 1777 |
| MaeI | CTAG | 2 cut(s) | 689, 1920 |
| MaeII | ACGT | 3 cut(s) | 1356, 1371, 1620 |
| MaeIII | GTNAC | 3 cut(s) | 164, 293, 305 |
| MalI | GATC | 4 cut(s) | 469, 864, 1362, 1925 |
| MboI | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| MfeI | CAATTG | 2 cut(s) | 269, 858 |
| MflI | RGATCY | 1 cut(s) | 1360 |
| MhlI | GDGCHC | 4 cut(s) | 716, 1511, 1895, 1907 |
| MlyI | GAGTC | 2 cut(s) | 1440, 1685 |
| MmeI | TCCRAC | 3 cut(s) | 831, 1156, 2057 |
| Mph1103I | ATGCAT | 1 cut(s) | 1019 |
| MroI | TCCGGA | 1 cut(s) | 627 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1665, 1864 |
| MseI | TTAA | 7 cut(s) | 42, 599, 735, 1374, 1409, 2042, 2054 |
| MslI | CAYNNNNRTG | 2 cut(s) | 288, 876 |
| MspA1I | CMGCKG | 1 cut(s) | 752 |
| MspI | CCGG | 6 cut(s) | 303, 628, 1034, 1571, 1963, 2070 |
| MspR9I | CCNGG | 5 cut(s) | 203, 332, 1034, 1611, 1964 |
| MunI | CAATTG | 2 cut(s) | 269, 858 |
| MvaI | CCWGG | 3 cut(s) | 203, 332, 1611 |
| MvnI | CGCG | 2 cut(s) | 47, 1659 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 653, 1226, 1410 |
| NciI | CCSGG | 2 cut(s) | 1034, 1964 |
| NdeII | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| NlaIII | CATG | 6 cut(s) | 983, 990, 1386, 1759, 1837, 1936 |
| NlaIV | GGNNCC | 7 cut(s) | 200, 329, 458, 587, 914, 1123, 1228 |
| NmuCI | GTSAC | 1 cut(s) | 305 |
| NruI | TCGCGA | 1 cut(s) | 1659 |
| NsiI | ATGCAT | 1 cut(s) | 1019 |
| NspI | RCATGY | 2 cut(s) | 990, 1386 |
| NspV | TTCGAA | 1 cut(s) | 152 |
| PciSI | GCTCTTC | 2 cut(s) | 562, 1178 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1665, 1864 |
| PfeI | GAWTC | 8 cut(s) | 154, 541, 1130, 1457, 1514, 1673, 1697, 1730 |
| PkrI | GCNGC | 6 cut(s) | 208, 337, 595, 787, 843, 1974 |
| PleI | GAGTC | 2 cut(s) | 1439, 1685 |
| PpsI | GAGTC | 2 cut(s) | 1439, 1685 |
| Psp124BI | GAGCTC | 1 cut(s) | 716 |
| Psp1406I | AACGTT | 1 cut(s) | 1371 |
| Psp6I | CCWGG | 3 cut(s) | 201, 330, 1609 |
| PspGI | CCWGG | 3 cut(s) | 201, 330, 1609 |
| PspN4I | GGNNCC | 7 cut(s) | 200, 329, 458, 587, 914, 1123, 1228 |
| PspPI | GGNCC | 3 cut(s) | 1031, 1121, 1916 |
| PstI | CTGCAG | 1 cut(s) | 1974 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1913 |
| PsuI | RGATCY | 1 cut(s) | 1360 |
| PvuII | CAGCTG | 1 cut(s) | 752 |
| RruI | TCGCGA | 1 cut(s) | 1659 |
| RsaI | GTAC | 9 cut(s) | 61, 329, 458, 587, 617, 1195, 1871, 2014, 2108 |
| RsaNI | GTAC | 9 cut(s) | 60, 328, 457, 586, 616, 1194, 1870, 2013, 2107 |
| RseI | CAYNNNNRTG | 2 cut(s) | 288, 876 |
| SacI | GAGCTC | 1 cut(s) | 716 |
| SapI | GCTCTTC | 2 cut(s) | 562, 1178 |
| SaqAI | TTAA | 7 cut(s) | 42, 599, 735, 1374, 1409, 2042, 2054 |
| SatI | GCNGC | 6 cut(s) | 207, 336, 594, 786, 842, 1973 |
| Sau3AI | GATC | 4 cut(s) | 467, 862, 1360, 1923 |
| Sau96I | GGNCC | 3 cut(s) | 1031, 1121, 1916 |
| ScaI | AGTACT | 1 cut(s) | 2014 |
| SchI | GAGTC | 2 cut(s) | 1440, 1685 |
| ScrFI | CCNGG | 5 cut(s) | 203, 332, 1034, 1611, 1964 |
| SduI | GDGCHC | 4 cut(s) | 716, 1511, 1895, 1907 |
| SfaNI | GCATC | 6 cut(s) | 218, 347, 416, 1026, 1434, 1777 |
| SfcI | CTRYAG | 1 cut(s) | 1970 |
| SfuI | TTCGAA | 1 cut(s) | 152 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 288, 876 |
| SmlI | CTYRAG | 1 cut(s) | 704 |
| SmoI | CTYRAG | 1 cut(s) | 704 |
| SsiI | CCGC | 3 cut(s) | 116, 709, 1224 |
| SspI | AATATT | 1 cut(s) | 1664 |
| SspMI | CTAG | 2 cut(s) | 689, 1920 |
| SstI | GAGCTC | 1 cut(s) | 716 |
| StyD4I | CCNGG | 5 cut(s) | 201, 330, 1032, 1609, 1962 |
| StyI | CCWWGG | 4 cut(s) | 789, 1161, 1919, 1991 |
| TaaI | ACNGT | 6 cut(s) | 920, 1094, 1292, 1498, 1538, 2106 |
| TaiI | ACGT | 3 cut(s) | 1359, 1374, 1623 |
| TaqI | TCGA | 5 cut(s) | 152, 539, 729, 1133, 1763 |
| TaqII | GACCGA | 2 cut(s) | 540, 984 |
| TatI | WGTACW | 3 cut(s) | 615, 2012, 2106 |
| TfiI | GAWTC | 8 cut(s) | 154, 541, 1130, 1457, 1514, 1673, 1697, 1730 |
| Tru1I | TTAA | 7 cut(s) | 42, 599, 735, 1374, 1409, 2042, 2054 |
| Tru9I | TTAA | 7 cut(s) | 42, 599, 735, 1374, 1409, 2042, 2054 |
| TscAI | CASTG | 9 cut(s) | 181, 439, 568, 923, 1099, 1297, 1503, 1516, 2070 |
| TseFI | GTSAC | 1 cut(s) | 305 |
| TseI | GCWGC | 6 cut(s) | 206, 335, 593, 785, 841, 1972 |
| Tsp45I | GTSAC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 9 cut(s) | 996, 1341, 1410, 1449, 1740, 1744, 1797, 1812, 1877 |
| TspGWI | ACGGA | 1 cut(s) | 1462 |
| TspRI | CASTG | 9 cut(s) | 181, 439, 568, 923, 1099, 1297, 1503, 1516, 2070 |
| XapI | RAATTY | 5 cut(s) | 1266, 1318, 1328, 1678, 1864 |
| XceI | RCATGY | 2 cut(s) | 990, 1386 |
| XmaJI | CCTAGG | 1 cut(s) | 1919 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1665, 1864 |
| XspI | CTAG | 2 cut(s) | 689, 1920 |
| ZrmI | AGTACT | 1 cut(s) | 2014 |
| Zsp2I | ATGCAT | 1 cut(s) | 1019 |