Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006835

Physical Location & Seq

Genomic Coordinates Reverse (-)

15022072 .. 15038703

Gene Structure 16632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g21470.t7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5793 bp

ATGGCTCCGTCTTCCAAGAAACCCCAGAAGAAGAATCCCAGAGACCCTCCCAAGTTCAACAACTCCTCAAAGAAGCCTTTCAAACCAAACAAGGACCACAACACCACCACCAACGCCGCCATGGTTTTGCAGCTCGAAGACGACGTCCCCGACTTCCCCCGAGGTGGAGGGAGCTCTTTGAATCGAAAAGAGCGCGATGAGATTAGGGCGGAGGTTGATGCCGAATTCGAGGCTGAAGAGAGGGAGCTGAAGAAAGGAGGGAAGAAGAACAAGAGAAAGATGCCGAAGGAGAGCCTTGCACACGAGGACGACATGGGCTCGCTTTTCGGTGATGGCATCACCGGAAAGCTACCTAGATACGCAAACAAGATCACTATGAAGAATATATCTCCTGGGATGAAGGTTTGGGGAGTTGTTGCCGAAGTGAATGAAAAGGACCTTGTAGTTAGTCTTCCGGGGGGCCTGCGAGGACTAGTTCGAGCTTCTGATGCTTTTGATCCTATTTTGGACGACGAAACTGAGGCTTTAGCAGATAGTGTCCTCCCTAGTGTATTTCGGGTAGGGCAGCTAGTATCTTGCATTGTGTTGCAGTTGGATGAGGATAAGAAAGAGAAAGGGAAACGGAAGATCTGGCTTTCTTTGCGCCTCTCTTTGTTGCATAAGGGCTTCAGTTTGGATTCTGTTCAAGAAGGCATGGTCCTTACAGCCTATGTTAAAAGCATCGAAGACCACGGTTACATTCTTCATTTTGGTTTATCTTCATTCACAGGGTTTTTGCCAAAAAATAGCCAAGCTGACAGCAAGGAGGTTCAAGTGAGCAGTGGTCAACTACTTCAAGCTGCTGTTAGAAGAGTTGATAAAATCCGCAAGGTTGTTCATATGAGTTCTGACCCAGAGATAATGTCAATGTGTGTGACCAAAGATCTCAAGGGAATTTCAATTGATTTACTTGTCCCGGGGATGATGGTCAATGCTCGTGTGCTATCCACCCTTGAAAATGGGGTCATGTTATCATTTCTTACGTACTTTACTGGAACCGTTGATATATATCATCTACAAAATAGTTACCCTACTACAAACTGGAAGGAAGACTACAATCAAAACAAGAAGCTCAATGCTCGAATATTATTTGTTGATCCTTCAACTAGAGCTGTTGGTTTGACACTGAATCCACATCTTGTTCGCAACAAGGCTCCTCCTTCACATGTCAAAATTGGAGATATATATGATGATTCAAAGGTAGTGAGGGTTGATAGAGGATTGGGCCTTCTGCTTGAAATACCATCTACTCAAATTTCAACTCCAGCCTATGTTAGTATATCTGATGTGGCTGAAGAAGTTCGGAAGCTTGAAAAGAAATTCAAGGAAGGTACTCGTGTTCGTGTCAGAATTCTTGGTTTTAGGCACTTGGAAGGGCTTGCGACTGGGATTTTGAAGGCAAGTGCATTTGAAGGGTCAGTTTTCACTCACTCTGATGTCAAGCCTGGGATGGTTGTGAGAGGTAAAATAATAGCTGTTGACAGCTTTGGGGCTATTGTGCAATTCCCTGGTGGTGTGAAGGCTCTTTGCCCTCTCACTCATATGTCTGAATTTGAAATTGCAAAGCCTAGAAAAAAATTTAAGATTGGGGCTGAACTTGTGTTCCGTGTGCTTGGTTGCAAGTCCAAGAGAATAACTGTTACACACAAGAAAACACTTGTAAAGTCAAAACTAGGGATTCTTAGTTCATATGCTGATGCTGCTGACGGATTAATAACACATGGGTGGATAAGAAAGATTGAAGAACGTGGATGCTTTATCCACTTTTACAATGGAGTCCAAGGATTTTCCCCAAGATCTGAACTTGGATTGGAGCCAGGATCTGGCCCAAGTACTATGTATCATGTTGGACAAGTTGTCAAGTGTAGAGTTATTGGCTCTAATGCTACATCCAGAAGAATCAAACTTAGCTTGATAATACAACCTCCAAGGGTTTCTGAGGATGATATGGTGAAGTTGGGCAGCCTTGTTTCAGGAGTTGTTGACCGGGTAACCCCCAATGCTGTCATGGTTTATGTTAATGCAAAAGGTTACTCAATGGGCACAATTTTTACAGACCACTTGGCAGATCACCATGGGCTGGCTACTTTGATGAAGTCAGTATTGAAGCCTGGTTATGAATTTGATCAGTTATTGGTATTAGACACTGAAGGCAACAATTTGATCCTATCTGCAAAACCTTCTCTGCTTAACTCAGCTCCCAATCTTCCCTCAGAAGTCAGTCAAGTTCATCCTAATACTGTAGTACATGGCTACATTTGTAACTTAATTGACACTGGGTGCTTTGTTCGCTTCCTGGGGCGTGTAACTGGTTTCTCCCCAAGGCACAAGGCAATGGATGACTATAAAGGGGACCTTTCAGAAGCATATTACATTGGCCAGTCTGTCCGGAGTACTATTCTCGATGTCAATAGTGAAACAGGTAGAATAACACTATCATTGAAGCAGTCATCGTGCTCTTCAACAGATGCCTCTTTTATCCAGGAATACTTTGTTTCAGAGGACAAGATTGCTAAGCTGCAAATATTGAATTCAAAAGAATCAAGATCAAATTGGTCAGAAGGGTTTACAATTGGCAGTGTTGTTGAGGGGAAGGTCCAGGAGGCAAAGGACATTGGAGTTGTTGTCAGCTTTGAGAAATATAGTGATGTCTTCGGTTTCATCACACACTATCAATTAGCTGGTACCACCGTAGAAACAGGATCCATCGTGCGAGCAGTTGTACTTGATGTTGCCAAGGCAGAGCACCTAGTTGACTTATCTCTCAAACCAGAATTCATTACTAACTTAAAACAAGAAAGTTCCAAGAGCCAAACTCATAAGAAGAAACGAAGAAGAGAAGTGTCAGATGATCCTGAGTTACACGAAACCGTAAATGCTGTTGTTGAGATTGTGAAGGAGAATTACCTGGTTCTTTCCATCCCAAAGTATAACTATGTTGTAGGATATGCATCAGTTTCTGATTACAACACTCAAAAGTTTCCCCAGAAACAGTTTCTGAATGGACAAAGTGTCAGTGCTACTGTCATGGCCCTTCCAAGCCCTACAACTGCTGGGAGATTGCTTTTGCTAGTTAATTCTTTGAGTGAGTCAGCTGATAGTTCCAGCTCAAAGAGGGCAAAAAAGAAATCCAGCTACAAAGTGGGATCTGTGGTCCAGGCAGAGATTACTGAAATTAAGCCTCTTGAACTACGATTGAAGTTTGGAATCGGCTTTCATGGACGGGTCCGTATAACAGAGGTAAATGATGATGTTCTGGAAGATCCATTTAATAACTTCAGAATTGGGCAAACCGTCACTGCAATTATCATTGCAAAGACTAATTCAGATAACAACAAAAAGAGTTTCCAGTGGGATCTGTCACTAAAACCTAGTTTGTTAACAGGTTCCTGTGAAATAGAGGGAAGTGTTATGAATGAAGATCTCAATTTTTCAATTGGAAAACATGTTACTGGCTATGTGTGCAAGGTGGATGCTGAATGGGTCTGGTTAACAATATCTCGGAATGTTAGGGCTCAGATTTTCATTCTTGACAGCGCTTGTGAGCCAAGTGAACTTCAAGAGTTTCAGAAACGGTTTCATGTTGGAAATGCTGTATCTGGTCATGTTTTAAGTGTTAGCAAGGAGAAAAAGCTATTACGGCTGGTTTCATATCCATTTTCTCCCGTCTCCAATAAAACAGTTGACCATGAGGTGACAAAGATGGATGCAAATGTTAGCATGCTGAATGCAACTGCTCATATTCGTGAGGGATGTGTTGTAGCTGGGAGGATTATTAAAAAGCTTCCAGGTGTTGGTGGATTGACTGTGCAAATTGGTCCCCATATGTATGGCAGGGTTCATTATAGTGAACTTTCTGACTCATGGGTGTCCAACCCATTGTCTGGATACGAGGAAGGACAATTTGTTAAATGCAAGGTCCTTGAATGTAGTCGCTCTGGACAGGGAACTTTTCACTTTGAGTTGTCATTACGATCTACTTTAGTTGGCACGCCTTGTCAAGATTCCAATGTACCTGACAATGATACGCTTACTCATATGGAGCGAGTGGAAAAGATTGACGATCTGAAACCTAATATGGTCGTACAGGGTTATGTGAAAAATGTTTCATCAAAAGGATGTTTTATTCTGCTTTCACGGAAGCTTGATGCCAGAATTCTTGTCTCCAATTTGTCTGATGGATATGTGGATGATCCTGAAAAGGAATTCCCAGTTGGAAAACTTGTTACCGGCAGGGTGTCATCTGTGGAGCCTTTGTCAAAGAGAGTTGAAGTTACCTTGAAGTCATTGAGTGCAAGCAGTTTGTCACAATCTGCAAAGAATAATTTGGATAGCTTGCAAGTCGGAGATATTATCTCTGGCAGGGTAAAACGACTCGAGTCATATGGGATATTCATCACAATTGACAATACAAACGTGGTTGGATTGTGCCATGTGTCCGAGCTTTCAGAAGATAAAAAGGAAAATTTTGAAAGTAAATATAGAACAGGAGAGAGGGTGACAGCAAAAGTATTGAAGGTGGATAAGGAGAGGCACCGGGTTTCACTTGGAATGAAGGATTTGTATATTATGGAAAATAGTGATCAAACACCTCCAAAACAAGATCTTGATGAACCTATCAGAAAGACTGCTTTGGTGGATGATAGTAGGTCAGTAACAGTAATGTGTCCTGTAGACAGTCTCCTTGGGGACCAAAACATGGAGATTGATCATGAAAATGCAGAGTTCCAGTTTCTTGCACAAGCAGAATCAAGAGCTTTTATTCCTCCGCTTGAAGTCACTCTTGATGACTCAGACCAAGGCGATGGGACTGTTAGCCAGGATCGAGAGCTTCCTGAAGTGGATAACACTGTAGATGACAAGAAAAAGAAGCTCACCAAGAAAAAAGCAAGGGATGAGAGGGAGCGTGAGATAAGGGCAGCTGAGGAAAGACTATTGGAGAAAGATATACCTAGGACTGATGAGGAATTTGAGAAACTAGTTAGAAGTTCTCCAAATAGCAGTTATGTTTGGATAAAATATATGGAATTTGTGCTCTCTATGGCTGATGTTGAGAAGGCGCGCTCTATTGCTAAAAGGGCTTTGGAGACGATAAACTTCCGAGAAGAGAATGAGAAGCTCAATGTTTGGGTGGCTTATTTTAATTTGGAAAGCAAATATGGAAGTCCTCCAGAGGAGGCTGTAATGAAAGTCTTTAAAGAAGCATTGCTGTATAATGATCCCAAAAAGGTTCATCTAGCACTCTTGGGAGTGTTTGAGAGGTCTGAGCTACACAAGTTAGCCGATGAGCTTGCTGATAACATGATTAAGAGGTTTAAGAAGTCTTGCAAGGTATGGCTAAGGCGGGTACAGAGGCTCTTGGTGCAACAGCAGGATGGGGTTCAGGATTTTATCTCTCGTGCTGAAAAGATCCTTCCTAAGCATAAGCATATCAAATTCTTGTCACAGACAGCCATACTTGAGTTCAAATGTGGGAACCCAGAGAGAGGGCGATCCTTGTTTGAAAATATTCTGAGGCAAAATCCGAAGAGAACTGACTTGTGGAGTGTTTATCTTGATCAAGAAATTCGGCTTGGAGATACTGATCTGATTCGCGCACTCTTTGAGAGGGCAACTAGTTTGAGCCTCCCAGCTAAAAAGATGAAATTCTTGTTCAAAAAATATCTGGACTATGAAGAGCGTCACGGTAATGAAGATAGGGCCAATTACGTGAAACAGAAAGCCATGAGTTATGTTGAAAATACAGTAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000460 GO:0000462 GO:0000466 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005886 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008134 GO:0008150 GO:0008152 GO:0009553 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031974 GO:0031981 GO:0032040 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0070013 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

S1 Suf

Protein Analysis

1931

Amino Acids

215.64

Weight (kDa)

8.75

Isoelectric Point (pI)

36.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S1_RRP5	PF23459	109 - 180	1.3e-07	RRP5 S1 domain
OB_RRP5_4th	PF24685	189 - 279	1.8e-40	RRP5 OB-fold domain
S1	PF00575	284 - 348	3.9e-08	S1 RNA binding domain
S1	PF00575	549 - 619	1.2e-06	S1 RNA binding domain
OB_RRP5	PF24682	744 - 831	3e-39	RRP5 OB-fold domain
S1	PF00575	1053 - 1117	4.7e-06	S1 RNA binding domain
S1_RRP5	PF23459	1160 - 1230	4.5e-08	RRP5 S1 domain
S1	PF00575	1250 - 1323	5.7e-16	S1 RNA binding domain
HAT_Syf1_CNRKL1_C	PF23231	1469 - 1718	1.1e-10	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
Suf	PF05843	1619 - 1717	5e-07	Suppressor of forked protein (Suf)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0006835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11964 AT3G11964
fragaria_vesca	FvH4_6g21470 FvH4_6g21470 FvH4_6g21470 FvH4_6g21470 FvH4_6g21470 FvH4_6g21470 FvH4_6g21470
malus_domestica	MD12G1051100.v1.1
prunus_persica	Prupe.7G085700_v2.0.a1 Prupe.7G085700_v2.0.a1
pyrus_communis	pycom12g04550
rosa_chinensis	RchiOBHm_Chr3g0478661
rosa_laevigata	RLG00000023635
rosa_multiflora	Rmu_sc0002454.1_g000002 Rmu_sc0023704.1_g000001
rosa_roxburghii	Rroxscaffold_6G00403220
rosa_rugosa	Rorug03G0166800 Rorug03G0166800 Rorug03G0166900
rosa_samantha	Rh3AG219000 Rh3BG250700 Rh3CG247500 Rh3DG243800
rosa_wichuraiana	Rw3G019690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	147
Acc65I	GGTACC	1 cut(s)	2723
AccB1I	GGYRCC	2 cut(s)	2723, 4572
AccB7I	CCANNNNNTGG	5 cut(s)	1862, 2119, 3833, 3923, 4738
AccI	GTMKAC	1 cut(s)	4713
AccII	CGCG	3 cut(s)	195, 5101, 5634
AccIII	TCCGGA	1 cut(s)	2427
AciI	CCGC	5 cut(s)	117, 209, 865, 4808, 5383
AcoI	YGGCCR	1 cut(s)	2416
AcuI	CTGAAG	7 cut(s)	255, 269, 652, 1353, 2208, 3301, 4896
AcyI	GRCGYC	1 cut(s)	144
AdeI	CACNNNGTG	1 cut(s)	2319
AfeI	AGCGCT	1 cut(s)	3577
AfiI	CCNNNNNNNGG	7 cut(s)	164, 1862, 2119, 3833, 3923, 4738, 5525
AflIII	ACRYGT	2 cut(s)	1204, 3484
AhdI	GACNNNNNGTC	2 cut(s)	1895, 3050
AhlI	ACTAGT	3 cut(s)	472, 5017, 5654
AjuI	GAANNNNNNNTTGG	4 cut(s)	4236, 4268, 5595, 5627
AleI	CACNNNNGTG	1 cut(s)	1762
AloI	GAACNNNNNNTCC	4 cut(s)	1626, 1658, 1708, 1740
Alw21I	GWGCWC	4 cut(s)	176, 2498, 2787, 5076
Alw26I	GTCTC	5 cut(s)	36, 3712, 4207, 4724, 5120
AlwNI	CAGNNNCTG	3 cut(s)	1862, 2999, 3037
Ama87I	CYCGRG	3 cut(s)	159, 955, 4415
Aor13HI	TCCGGA	1 cut(s)	2427
Aor51HI	AGCGCT	1 cut(s)	3577
AoxI	GGCC	6 cut(s)	460, 1264, 1864, 2416, 3069, 5739
ApeKI	GCWGC	7 cut(s)	130, 565, 839, 1739, 2001, 2557, 4958
ArsI	GACNNNNNNTTYG	4 cut(s)	129, 161, 1414, 1446
AseI	ATTAAT	1 cut(s)	1751
Asp700I	GAANNNNTTC	3 cut(s)	77, 1338, 5547
Asp718I	GGTACC	1 cut(s)	2723
AspA2I	CCTAGG	1 cut(s)	4991
AspLEI	GCGC	6 cut(s)	195, 645, 3578, 5101, 5103, 5636
AsuC2I	CCSGG	5 cut(s)	456, 956, 957, 2027, 4577
AsuHPI	GGTGA	7 cut(s)	331, 341, 2002, 2102, 3745, 4549, 4906
AvaI	CYCGRG	3 cut(s)	159, 955, 4415
AvrII	CCTAGG	1 cut(s)	4991
BaeGI	GKGCMC	1 cut(s)	2084
BaeI	ACNNNNGTAYC	4 cut(s)	1362, 1395, 2715, 2748
BalI	TGGCCA	1 cut(s)	2418
BamHI	GGATCC	1 cut(s)	2741
BanI	GGYRCC	2 cut(s)	2723, 4572
BanII	GRGCYC	3 cut(s)	176, 320, 3556
BarI	GAAGNNNNNNTAC	6 cut(s)	435, 467, 1076, 1108, 2927, 2959
BauI	CACGAG	4 cut(s)	302, 975, 1374, 5436
BbsI	GAAGAC	6 cut(s)	3, 144, 443, 732, 1095, 2683
Bbv12I	GWGCWC	4 cut(s)	176, 2498, 2787, 5076
BbvCI	CCTCAGC	1 cut(s)	4962
BbvI	GCAGC	7 cut(s)	142, 577, 826, 1726, 2013, 2544, 4970
BceAI	ACGGC	1 cut(s)	3695
BcgI	CGANNNNNNTGC	2 cut(s)	5312, 5346
BciVI	GTATCC	1 cut(s)	3920
BclI	TGATCA	4 cut(s)	2164, 4621, 4747, 5596
BcnI	CCSGG	5 cut(s)	456, 956, 957, 2027, 4577
BcoDI	GTCTC	5 cut(s)	36, 3712, 4207, 4724, 5120
BcuI	ACTAGT	3 cut(s)	472, 5017, 5654
BfmI	CTRYAG	3 cut(s)	2280, 4710, 4890
BfoI	RGCGCY	1 cut(s)	3579
BfuI	GTATCC	1 cut(s)	3920
BglII	AGATCT	5 cut(s)	627, 922, 1835, 3460, 4642
BisI	GCNGC	8 cut(s)	117, 131, 566, 840, 1740, 2002, 2558, 4959
BlnI	CCTAGG	1 cut(s)	4991
BlpI	GCTNAGC	1 cut(s)	2553
BlsI	GCNGC	8 cut(s)	118, 132, 567, 841, 1741, 2003, 2559, 4960
BmcAI	AGTACT	2 cut(s)	1873, 2434
BmeRI	GACNNNNNGTC	2 cut(s)	1895, 3050
BmeT110I	CYCGRG	3 cut(s)	159, 955, 4415
BmrI	ACTGGG	3 cut(s)	1434, 2325, 4244
BmuI	ACTGGG	3 cut(s)	1434, 2325, 4244
BoxI	GACNNNNGTC	1 cut(s)	4417
BpiI	GAAGAC	6 cut(s)	3, 144, 443, 732, 1095, 2683
BplI	GAGNNNNNCTC	2 cut(s)	2839, 2871
BpmI	CTGGAG	2 cut(s)	1287, 5193
Bpu10I	CCTNAGC	3 cut(s)	4962, 5378, 5457
Bpu1102I	GCTNAGC	1 cut(s)	2553
BpuEI	CTTGAG	2 cut(s)	911, 5519
BpuMI	CCSGG	5 cut(s)	456, 956, 957, 2027, 4577
BsaAI	YACGTR	2 cut(s)	1023, 5749
BsaBI	GATNNNNATC	4 cut(s)	1047, 2989, 4433, 5622
BsaHI	GRCGYC	1 cut(s)	144
BsaI	GGTCTC	1 cut(s)	36
BsaWI	WCCGGW	2 cut(s)	341, 2427
BsaXI	ACNNNNNCTCC	6 cut(s)	2649, 2679, 4280, 4310, 4521, 4551
Bsc4I	CCNNNNNNNGG	7 cut(s)	164, 1862, 2119, 3833, 3923, 4738, 5525
Bse118I	RCCGGY	1 cut(s)	4268
Bse3DI	GCAATG	3 cut(s)	2379, 3348, 5243
Bse8I	GATNNNNATC	4 cut(s)	1047, 2989, 4433, 5622
BseAI	TCCGGA	1 cut(s)	2427
BseJI	GATNNNNATC	4 cut(s)	1047, 2989, 4433, 5622
BseLI	CCNNNNNNNGG	7 cut(s)	164, 1862, 2119, 3833, 3923, 4738, 5525
BseMI	GCAATG	3 cut(s)	2379, 3348, 5243
BsePI	GCGCGC	1 cut(s)	5099
BseRI	GAGGAG	3 cut(s)	55, 1185, 5228
BseSI	GKGCMC	1 cut(s)	2084
BseXI	GCAGC	7 cut(s)	142, 577, 826, 1726, 2013, 2544, 4970
BseYI	CCCAGC	3 cut(s)	3092, 3803, 5668
Bsh1236I	CGCG	3 cut(s)	195, 5101, 5634
BshFI	GGCC	6 cut(s)	462, 1266, 1866, 2418, 3071, 5741
BshNI	GGYRCC	2 cut(s)	2723, 4572
BsiHKAI	GWGCWC	4 cut(s)	176, 2498, 2787, 5076
BsiHKCI	CYCGRG	3 cut(s)	159, 955, 4415
BsiSI	CCGG	7 cut(s)	342, 455, 956, 2026, 2428, 4269, 4576
BslFI	GGGAC	6 cut(s)	131, 938, 2405, 3843, 4742, 4861
BslI	CCNNNNNNNGG	7 cut(s)	164, 1862, 2119, 3833, 3923, 4738, 5525
BsmAI	GTCTC	5 cut(s)	36, 3712, 4207, 4724, 5120
BsmBI	CGTCTC	2 cut(s)	3712, 5120
BsmFI	GGGAC	6 cut(s)	131, 938, 2405, 3843, 4742, 4861
BsmI	GAATGC	1 cut(s)	3772
BsnI	GGCC	6 cut(s)	462, 1266, 1866, 2418, 3071, 5741
Bso31I	GGTCTC	1 cut(s)	36
BsoBI	CYCGRG	3 cut(s)	159, 955, 4415
Bsp1286I	GDGCHC	7 cut(s)	176, 320, 2084, 2498, 2787, 3556, 5076
Bsp13I	TCCGGA	1 cut(s)	2427
Bsp1720I	GCTNAGC	1 cut(s)	2553
Bsp19I	CCATGG	2 cut(s)	120, 2113
BspACI	CCGC	5 cut(s)	117, 209, 865, 4808, 5383
BspANI	GGCC	6 cut(s)	462, 1266, 1866, 2418, 3071, 5741
BspEI	TCCGGA	1 cut(s)	2427
BspFNI	CGCG	3 cut(s)	195, 5101, 5634
BspHI	TCATGA	1 cut(s)	4750
BspQI	GCTCTTC	2 cut(s)	2503, 5709
BspT107I	GGYRCC	2 cut(s)	2723, 4572
BspTNI	GGTCTC	1 cut(s)	36
BsrDI	GCAATG	3 cut(s)	2379, 3348, 5243
BsrFI	RCCGGY	1 cut(s)	4268
BssAI	RCCGGY	1 cut(s)	4268
BssHII	GCGCGC	1 cut(s)	5099
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	4 cut(s)	302, 975, 1374, 5436
BssT1I	CCWWGG	9 cut(s)	120, 1819, 1967, 2113, 2360, 2775, 4723, 4837, 4991
Bst2BI	CACGAG	4 cut(s)	302, 975, 1374, 5436
Bst6I	CTCTTC	7 cut(s)	231, 844, 2503, 2869, 5139, 5561, 5709
BstACI	GRCGYC	1 cut(s)	144
BstBAI	YACGTR	2 cut(s)	1023, 5749
BstDSI	CCRYGG	3 cut(s)	120, 730, 2113
BstEII	GGTNACC	1 cut(s)	2029
BstFNI	CGCG	3 cut(s)	195, 5101, 5634
BstH2I	RGCGCY	1 cut(s)	3579
BstHHI	GCGC	6 cut(s)	195, 645, 3578, 5101, 5103, 5636
BstMAI	GTCTC	5 cut(s)	36, 3712, 4207, 4724, 5120
BstMWI	GCNNNNNNNGC	8 cut(s)	488, 640, 1739, 2328, 3501, 3679, 5117, 5401
BstNSI	RCATGY	3 cut(s)	1208, 3488, 3763
BstPAI	GACNNNNGTC	1 cut(s)	4417
BstPI	GGTNACC	1 cut(s)	2029
BstSFI	CTRYAG	3 cut(s)	2280, 4710, 4890
BstSLI	GKGCMC	1 cut(s)	2084
BstSNI	TACGTA	1 cut(s)	1023
BstUI	CGCG	3 cut(s)	195, 5101, 5634
BstV1I	GCAGC	7 cut(s)	142, 577, 826, 1726, 2013, 2544, 4970
BstV2I	GAAGAC	6 cut(s)	3, 144, 443, 732, 1095, 2683
BstXI	CCANNNNNNTGG	2 cut(s)	3869, 4844
BsuI	GTATCC	1 cut(s)	3920
BsuRI	GGCC	6 cut(s)	462, 1266, 1866, 2418, 3071, 5741
BtgI	CCRYGG	3 cut(s)	120, 730, 2113
BtgZI	GCGATG	2 cut(s)	210, 4857
BtsI	GCAGTG	3 cut(s)	826, 2623, 3336
BtsIMutI	CAGTG	9 cut(s)	826, 1163, 2184, 2313, 2623, 3061, 3336, 3395, 4887
CaiI	CAGNNNCTG	3 cut(s)	1862, 2999, 3037
CciI	TCATGA	1 cut(s)	4750
CfoI	GCGC	6 cut(s)	195, 645, 3578, 5101, 5103, 5636
Cfr10I	RCCGGY	1 cut(s)	4268
Cfr9I	CCCGGG	1 cut(s)	955
CseI	GACGC	1 cut(s)	5708
CsiI	ACCWGGT	1 cut(s)	2946
DraI	TTTAAA	1 cut(s)	5236
DraIII	CACNNNGTG	1 cut(s)	2319
DriI	GACNNNNNGTC	2 cut(s)	1895, 3050
EaeI	YGGCCR	1 cut(s)	2416
Eam1104I	CTCTTC	7 cut(s)	231, 844, 2503, 2869, 5139, 5561, 5709
Eam1105I	GACNNNNNGTC	2 cut(s)	1895, 3050
EarI	CTCTTC	7 cut(s)	231, 844, 2503, 2869, 5139, 5561, 5709
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	1 cut(s)	174
Eco105I	TACGTA	1 cut(s)	1023
Eco130I	CCWWGG	9 cut(s)	120, 1819, 1967, 2113, 2360, 2775, 4723, 4837, 4991
Eco24I	GRGCYC	3 cut(s)	176, 320, 3556
Eco31I	GGTCTC	1 cut(s)	36
Eco47III	AGCGCT	1 cut(s)	3577
Eco53kI	GAGCTC	1 cut(s)	174
Eco57I	CTGAAG	7 cut(s)	255, 269, 652, 1353, 2208, 3301, 4896
Eco88I	CYCGRG	3 cut(s)	159, 955, 4415
Eco91I	GGTNACC	1 cut(s)	2029
EcoICRI	GAGCTC	1 cut(s)	174
EcoO109I	RGGNCCY	4 cut(s)	436, 460, 2392, 3958
EcoO65I	GGTNACC	1 cut(s)	2029
EcoRI	GAATTC	6 cut(s)	224, 1389, 2569, 2813, 4194, 4244
EcoT14I	CCWWGG	9 cut(s)	120, 1819, 1967, 2113, 2360, 2775, 4723, 4837, 4991
EcoT22I	ATGCAT	1 cut(s)	2992
EcoT38I	GRGCYC	3 cut(s)	176, 320, 3556
ErhI	CCWWGG	9 cut(s)	120, 1819, 1967, 2113, 2360, 2775, 4723, 4837, 4991
Esp3I	CGTCTC	2 cut(s)	3712, 5120
FalI	AAGNNNNNCTT	4 cut(s)	2379, 2411, 4806, 4838
FaqI	GGGAC	6 cut(s)	131, 938, 2405, 3843, 4742, 4861
FauI	CCCGC	1 cut(s)	5376
FauNDI	CATATG	6 cut(s)	879, 1581, 1729, 3864, 4077, 4423
FbaI	TGATCA	4 cut(s)	2164, 4621, 4747, 5596
FblI	GTMKAC	1 cut(s)	4713
Fnu4HI	GCNGC	8 cut(s)	117, 131, 566, 840, 1740, 2002, 2558, 4959
FriOI	GRGCYC	3 cut(s)	176, 320, 3556
Fsp4HI	GCNGC	8 cut(s)	117, 131, 566, 840, 1740, 2002, 2558, 4959
GlaI	GCGC	6 cut(s)	194, 644, 3577, 5100, 5102, 5635
GluI	GCNGC	8 cut(s)	117, 131, 566, 840, 1740, 2002, 2558, 4959
GsaI	CCCAGC	3 cut(s)	3096, 3807, 5672
GsuI	CTGGAG	2 cut(s)	1287, 5193
HaeII	RGCGCY	1 cut(s)	3579
HaeIII	GGCC	6 cut(s)	462, 1266, 1866, 2418, 3071, 5741
HapII	CCGG	7 cut(s)	342, 455, 956, 2026, 2428, 4269, 4576
HgaI	GACGC	1 cut(s)	5708
HhaI	GCGC	6 cut(s)	195, 645, 3578, 5101, 5103, 5636
Hin1I	GRCGYC	1 cut(s)	144
Hin6I	GCGC	6 cut(s)	193, 643, 3576, 5099, 5101, 5634
HinP1I	GCGC	6 cut(s)	193, 643, 3576, 5099, 5101, 5634
HincII	GTYRAC	7 cut(s)	827, 1519, 2023, 2794, 3420, 3531, 3724
HindII	GTYRAC	7 cut(s)	827, 1519, 2023, 2794, 3420, 3531, 3724
HindIII	AAGCTT	3 cut(s)	1346, 3821, 4181
HpaI	GTTAAC	2 cut(s)	3420, 3531
HpaII	CCGG	7 cut(s)	342, 455, 956, 2026, 2428, 4269, 4576
HphI	GGTGA	7 cut(s)	331, 341, 2002, 2102, 3745, 4549, 4906
Hpy99I	CGWCG	2 cut(s)	146, 515
HpyCH4IV	ACGT	5 cut(s)	144, 1022, 1786, 4455, 5748
HpyF10VI	GCNNNNNNNGC	8 cut(s)	488, 640, 1739, 2328, 3501, 3679, 5117, 5401
HpySE526I	ACGT	5 cut(s)	144, 1022, 1786, 4455, 5748
Hsp92I	GRCGYC	1 cut(s)	144
HspAI	GCGC	6 cut(s)	193, 643, 3576, 5099, 5101, 5634
Kpn2I	TCCGGA	1 cut(s)	2427
KpnI	GGTACC	1 cut(s)	2727
Ksp22I	TGATCA	4 cut(s)	2164, 4621, 4747, 5596
KspAI	GTTAAC	2 cut(s)	3420, 3531
LguI	GCTCTTC	2 cut(s)	2503, 5709
LmnI	GCTCC	9 cut(s)	10, 171, 244, 1198, 1852, 2242, 4081, 4288, 4942
Lsp1109I	GCAGC	7 cut(s)	142, 577, 826, 1726, 2013, 2544, 4970
MabI	ACCWGGT	1 cut(s)	2946
MaeII	ACGT	5 cut(s)	144, 1022, 1786, 4455, 5748
MfeI	CAATTG	4 cut(s)	939, 2610, 3474, 4440
MhlI	GDGCHC	7 cut(s)	176, 320, 2084, 2498, 2787, 3556, 5076
MlsI	TGGCCA	1 cut(s)	2418
MluNI	TGGCCA	1 cut(s)	2418
MlyI	GAGTC	6 cut(s)	1824, 3137, 3893, 4407, 4427, 4823
MmeI	TCCRAC	7 cut(s)	573, 1867, 3604, 3936, 4234, 4363, 4441
Mox20I	TGGCCA	1 cut(s)	2418
Mph1103I	ATGCAT	1 cut(s)	2992
MroI	TCCGGA	1 cut(s)	2427
MroXI	GAANNNNTTC	3 cut(s)	77, 1338, 5547
MscI	TGGCCA	1 cut(s)	2418
MslI	CAYNNNNRTG	8 cut(s)	1473, 1580, 1762, 3783, 3867, 3885, 4755, 5727
Msp20I	TGGCCA	1 cut(s)	2418
MspA1I	CMGCKG	2 cut(s)	3134, 4961
MspI	CCGG	7 cut(s)	342, 455, 956, 2026, 2428, 4269, 4576
MunI	CAATTG	4 cut(s)	939, 2610, 3474, 4440
Mva1269I	GAATGC	1 cut(s)	3772
MvnI	CGCG	3 cut(s)	195, 5101, 5634
MwoI	GCNNNNNNNGC	8 cut(s)	488, 640, 1739, 2328, 3501, 3679, 5117, 5401
NciI	CCSGG	5 cut(s)	456, 956, 957, 2027, 4577
NcoI	CCATGG	2 cut(s)	120, 2113
NdeI	CATATG	6 cut(s)	879, 1581, 1729, 3864, 4077, 4423
NmuCI	GTSAC	9 cut(s)	913, 3334, 3399, 3733, 4344, 4537, 4816, 5481, 5720
NsiI	ATGCAT	1 cut(s)	2992
NspI	RCATGY	3 cut(s)	1208, 3488, 3763
OliI	CACNNNNGTG	1 cut(s)	1762
PaeI	GCATGC	1 cut(s)	3763
PaeR7I	CTCGAG	1 cut(s)	4415
PagI	TCATGA	1 cut(s)	4750
PauI	GCGCGC	1 cut(s)	5099
PciI	ACATGT	2 cut(s)	1204, 3484
PciSI	GCTCTTC	2 cut(s)	2503, 5709
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 147
PctI	GAATGC	1 cut(s)	3772
PdmI	GAANNNNTTC	3 cut(s)	77, 1338, 5547
PflFI	GACNNNGTC	1 cut(s)	143
PflMI	CCANNNNNTGG	5 cut(s)	1862, 2119, 3833, 3923, 4738
PfoI	TCCNGGA	2 cut(s)	2520, 2637
PkrI	GCNGC	8 cut(s)	118, 132, 567, 841, 1741, 2003, 2559, 4960
PleI	GAGTC	6 cut(s)	1823, 3136, 3893, 4407, 4426, 4823
PpsI	GAGTC	6 cut(s)	1823, 3136, 3893, 4407, 4426, 4823
Ppu21I	YACGTR	2 cut(s)	1023, 5749
PpuMI	RGGWCCY	3 cut(s)	436, 2392, 3958
PscI	ACATGT	2 cut(s)	1204, 3484
PshAI	GACNNNNGTC	1 cut(s)	4417
PshBI	ATTAAT	1 cut(s)	1751
Psp124BI	GAGCTC	1 cut(s)	176
Psp5II	RGGWCCY	3 cut(s)	436, 2392, 3958
PspEI	GGTNACC	1 cut(s)	2029
PspFI	CCCAGC	3 cut(s)	3092, 3803, 5668
PspPPI	RGGWCCY	3 cut(s)	436, 2392, 3958
PspXI	VCTCGAGB	1 cut(s)	4415
PstNI	CAGNNNCTG	3 cut(s)	1862, 2999, 3037
PsyI	GACNNNGTC	1 cut(s)	143
PteI	GCGCGC	1 cut(s)	5099
PvuII	CAGCTG	2 cut(s)	3134, 4961
RseI	CAYNNNNRTG	8 cut(s)	1473, 1580, 1762, 3783, 3867, 3885, 4755, 5727
SacI	GAGCTC	1 cut(s)	176
SapI	GCTCTTC	2 cut(s)	2503, 5709
SatI	GCNGC	8 cut(s)	117, 131, 566, 840, 1740, 2002, 2558, 4959
ScaI	AGTACT	2 cut(s)	1873, 2434
SchI	GAGTC	6 cut(s)	1824, 3137, 3893, 4407, 4427, 4823
SduI	GDGCHC	7 cut(s)	176, 320, 2084, 2498, 2787, 3556, 5076
SexAI	ACCWGGT	1 cut(s)	2946
SfcI	CTRYAG	3 cut(s)	2280, 4710, 4890
Sfr274I	CTCGAG	1 cut(s)	4415
SlaI	CTCGAG	1 cut(s)	4415
SmaI	CCCGGG	1 cut(s)	957
SmiMI	CAYNNNNRTG	8 cut(s)	1473, 1580, 1762, 3783, 3867, 3885, 4755, 5727
SmlI	CTYRAG	3 cut(s)	926, 4415, 5498
SmoI	CTYRAG	3 cut(s)	926, 4415, 5498
SnaBI	TACGTA	1 cut(s)	1023
SpeI	ACTAGT	3 cut(s)	472, 5017, 5654
SphI	GCATGC	1 cut(s)	3763
SsiI	CCGC	5 cut(s)	117, 209, 865, 4808, 5383
SspI	AATATT	3 cut(s)	1125, 2565, 5548
SstI	GAGCTC	1 cut(s)	176
StyI	CCWWGG	9 cut(s)	120, 1819, 1967, 2113, 2360, 2775, 4723, 4837, 4991
TaiI	ACGT	5 cut(s)	147, 1025, 1789, 4458, 5751
TaqI	TCGA	9 cut(s)	135, 184, 228, 478, 723, 1120, 2442, 4416, 4864
TatI	WGTACW	4 cut(s)	1871, 2284, 2432, 2761
TauI	GCSGC	1 cut(s)	119
TscAI	CASTG	9 cut(s)	826, 1170, 2191, 2320, 2623, 3061, 3343, 3395, 4894
TseFI	GTSAC	9 cut(s)	913, 3334, 3399, 3733, 4344, 4537, 4816, 5481, 5720
TseI	GCWGC	7 cut(s)	130, 565, 839, 1739, 2001, 2557, 4958
Tsp45I	GTSAC	9 cut(s)	913, 3334, 3399, 3733, 4344, 4537, 4816, 5481, 5720
TspGWI	ACGGA	5 cut(s)	637, 1634, 1761, 3257, 4192
TspMI	CCCGGG	1 cut(s)	955
TspRI	CASTG	9 cut(s)	826, 1170, 2191, 2320, 2623, 3061, 3343, 3395, 4894
Tth111I	GACNNNGTC	1 cut(s)	143
Van91I	CCANNNNNTGG	5 cut(s)	1862, 2119, 3833, 3923, 4738
VspI	ATTAAT	1 cut(s)	1751
XceI	RCATGY	3 cut(s)	1208, 3488, 3763
XcmI	CCANNNNNNNNNTGG	4 cut(s)	118, 1808, 2044, 3178
XhoI	CTCGAG	1 cut(s)	4415
XmaI	CCCGGG	1 cut(s)	955
XmaJI	CCTAGG	1 cut(s)	4991
XmiI	GTMKAC	1 cut(s)	4713
XmnI	GAANNNNTTC	3 cut(s)	77, 1338, 5547
ZraI	GACGTC	1 cut(s)	145
ZrmI	AGTACT	2 cut(s)	1873, 2434
Zsp2I	ATGCAT	1 cut(s)	2992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.