Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0007372

Physical Location & Seq

Genomic Coordinates Forward (+)

18960896 .. 18966227

Gene Structure 5332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g25040.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGATATAAGTAATGAAGCCAGTGTTGATCCATTTCCTATTGGACCTTCAACCATTATTGGTCGGACCATTGCTTTCCGGATTTTGTTCTGCAAGTCCATGACTCATTTGAGACATCAGATCTTTAGTATGTTGTTTAGTCTCGTCTTTAGATTCAGGAATTTTTTGGCTCCTATGTTCTCATGGTTGCATCCTAGAAACCCGCAAGGGATATTGGCAATGGTGACAATTATCGCCTTTGTGTTGAAACGATACACAAATGTAAAAGTGAAGGCTGAAATGGCTTATCGGAGGAAATTTTGGAGAAATATGATGAGGACTGCCTTGACATACGAGGAGTGGGCTCATGCTGCTAAGATGCTTGATAAGGAGACCCCAAAGATGAATGAATCAGACCTTTATGATGAAGAAGTGGTTAGGAACAAGCTTCAAGAACTCCACCACCGTCGTGAAGAGGGTTCTCTCCGAGATATAATTTTCTGTATGCGAGCAGATCTTGTTAGAAATCTTGGTAACATGTGCAACCCTGAGCTTCACAAGGGGAGACTTCACGTGCCCAAACTTATAAAAGAATATATTGATGAGGTATCAACTCAGCTGAGAATGGTTTGTGATTCAGACTCAGAAGAGCTCTCATTGGAAGAGAAGCTTGCTTTCATGCATGAAACAAGACACGCTTTTGGGAGAACTGCCTTGCTCTTGAGTGGGGGTGCTTCTCTTGGATCATTTCATGTTGGTGTAGTTAAAACACTGGTGGAACATAAGCTTATGCCAAGAATAATTGCTGGTTCTAGTGTTGGGTCCATTATGTGTTCTGTTGTTGCCACTAGGTCTTGGCCAGAGCTGCAAAGTTTTTTTGAGGATTCTTGGCACTCGTTGCAGTTTTTTGATCAGATGGGTGGAATTTTTACAGTTGTGAAGAGGGTCATGACACGTGGGGCTGTCCATGAGATCAGGCAGTTGCAAATGATGCTAAGGCATTTAACCAGTAATTTAACATTTCAGGAAGCATACGACATGACAGGTCGAATTCTTGGGATAACTGTTTGCTCCCCAAGGAAGCACGAGCCACCTAGATGTCTGAACTACTTGACATCACCTCACGTTGTTATATGGAGTGCAGTGACAGCTTCTTGTGCTTTCCCAGGCCTTTTTGAGGCCCAGGAACTAATGGCGAAAGATAGAAGTGGAGAGATTGTTCCTTACCATCCTCCATTTAATTTGGATCCAGAGGCAGGGACAATGCCAGTGCGTAGGTGGCGGGACGGTAGTCTGGAAATTGATTTGCCTATGATGCAACTAAAAGAACTGTTCAATGTCAATCATTTTATAGTCAGTCAGGCAAATCCTCATATTGCACCATTATTAAGACTAAAGGAATTTGTGAGAGCTATTGGAGGCAACTTTGCTGCCAAGCTTGCGCATCTTGTTGAGATGGAGGTGAAACATAGATGTAACCAGATCCTTGAACTTGGTTTTCCCTTAGGCGGACTTGCTAAGCTGTTTGCTCAAGACTGGGAGGGCGATGTTACTATTGTGATGCCTGCCACTCTAGCTCAGTATTCAAAAATTATACAAAACCCAACATATGTTGAGCTTCAAAAGGCTGCCAACCAAGGTAGACGGTGCACTTGGGAGAAACTGTCAGCGATAAAAGCAAACTGTGGCATTGAACTTGCTCTTGATGAGTCTGTTGTTATTCTCAATCACATGCGTAGACTGAAAAGGAGTGCTGAAAGAGCTGCTGCTTCTTCTCATGGCCTACTGAGCACAGTCAGATTCAGTGCATCAAAAAGAATTCCATCTTGGAATTGCATTGCTCGTGAGAATTCTAGTGGTTCTCTTGAAGAAGACCTCCTTGGAGATGCTGGTTCCTCATTCCATCATGGAGTTGGCACACCCACCGGTGGTAAAAACTTCCATACCCACCGTAACATACATGATGGTCATGGAAGTGACAGCGAATCTGAGAATGCCGATTTAAATTCTTGGACCAGATCCGGTGGACCCTTGATGAGAACGACGTCAGCAACTAAATTCATCGACTTTGTCCAAAACTTGGACATTGATGCGGAACTGAACAGAGGATTGTTGGTTAATCCTAACTCAGGTACGACGCTCCAATTGGGGGGCAGTAATCAATACCATCACAGCTCAAGGGGGAGTACACCAGACCGTAGCCCGGACAGCACAAGATTTGATAGGAGGGATTTCGGGAATGTGGCTTCAGTAAACAGTGCTAGCATTATGGTGACAGAAGGTGATCTTTTGCAGCCGGAAAGGATACATAACGGGATTGTATTCAATGTTGTGAAGAAAGAAGACTTGTCATTGTCAAGTAGTAGGAGTCAGGATATGGAAAATTTTAACACTGAAGTTGCTGAGTGTGTGCAACTCGACTCTCTCGAAAAGGAGATGGATACTAGATCTGCATCTGAATATGGCGATGCTGATTCTGCTTCAGAAATAGGATTAAATGATACAGCGGCCAGCTGTAGCCAGTCTACAGATCAATCTATCACTGCTGATGATTCTAATAATCAGAGCTCTGAAGAGTGCAGGCAGTTGTTAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012511 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019433 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044424 GO:0044464 GO:0046461 GO:0046464 GO:0046486 GO:0046503 GO:0052689 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00100 ko00561 ko00564 ko00565 ko00590 ko00591 ko00592 ko01100 ko01110 map00100 map00561 map00564 map00565 map00590 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

DUF3336 Patatin

Protein Analysis

859

Amino Acids

96.27

Weight (kDa)

6.44

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3336	PF11815	94 - 225	2.4e-32	Domain of unknown function (DUF3336)
Patatin	PF01734	232 - 425	6.3e-19	Patatin-like phospholipase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04040 AT5G04040
fragaria_vesca	FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040
malus_domestica	MD12G1087400.v1.1 MD14G1083100.v1.1
prunus_persica	Prupe.7G047400_v2.0.a1
pyrus_communis	pycom12g07540 pycom14g07220
rosa_chinensis	RchiOBHm_Chr2g0124811
rosa_laevigata	RLG00000018823
rosa_multiflora	Rmu_sc0002939.1_g000008
rosa_roxburghii	Rroxscaffold_2G00119660
rosa_rugosa	Rorug02G0252600 Rorug02G0252700 Rorug02G0252800
rosa_samantha	Rh2AG312300 Rh2BG320500 Rh2CG300500 Rh2DG337700
rosa_wichuraiana	Rw2G025220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
AatII	GACGTC	1 cut(s)	2027
Acc16I	TGCGCA	1 cut(s)	1422
AccB7I	CCANNNNNTGG	1 cut(s)	2059
AccI	GTMKAC	3 cut(s)	1621, 1717, 2504
AccIII	TCCGGA	1 cut(s)	78
AciI	CCGC	5 cut(s)	203, 1261, 1488, 2072, 2486
AclWI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1992
AcoI	YGGCCR	2 cut(s)	836, 2487
AcuI	CTGAAG	4 cut(s)	2211, 2394, 2445, 2571
AcvI	CACGTG	2 cut(s)	553, 935
AcyI	GRCGYC	1 cut(s)	2024
AfaI	GTAC	2 cut(s)	2113, 2167
AfiI	CCNNNNNNNGG	8 cut(s)	1156, 1235, 1487, 1907, 2059, 2108, 2128, 2182
AflIII	ACRYGT	2 cut(s)	516, 932
AgeI	ACCGGT	1 cut(s)	1904
AjnI	CCWGG	2 cut(s)	1144, 1161
AjuI	GAANNNNNNNTTGG	4 cut(s)	1789, 1821, 1842, 1874
AleI	CACNNNNGTG	1 cut(s)	447
AloI	GAACNNNNNNTCC	2 cut(s)	1182, 1214
Alw21I	GWGCWC	4 cut(s)	633, 1631, 1772, 2549
Alw26I	GTCTC	4 cut(s)	106, 146, 365, 538
Alw44I	GTGCAC	1 cut(s)	1627
AlwI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1992
Aor13HI	TCCGGA	1 cut(s)	78
AoxI	GGCC	5 cut(s)	836, 1147, 1158, 1759, 2487
ApaLI	GTGCAC	1 cut(s)	1627
ApeKI	GCWGC	7 cut(s)	350, 844, 1409, 1607, 1742, 1745, 2272
AsiGI	ACCGGT	1 cut(s)	1904
AspLEI	GCGC	1 cut(s)	1423
AspS9I	GGNCC	6 cut(s)	44, 66, 801, 1159, 1992, 2006
AsuC2I	CCSGG	1 cut(s)	2183
AsuHPI	GGTGA	5 cut(s)	235, 1089, 1453, 2263, 2273
AsuNHI	GCTAGC	1 cut(s)	2240
AvaII	GGWCC	5 cut(s)	44, 66, 801, 1992, 2006
AxyI	CCTNAGG	1 cut(s)	1483
BaeGI	GKGCMC	2 cut(s)	558, 1631
BalI	TGGCCA	1 cut(s)	838
BamHI	GGATCC	1 cut(s)	1225
BanII	GRGCYC	3 cut(s)	346, 633, 2549
BauI	CACGAG	2 cut(s)	1064, 1821
BbrPI	CACGTG	2 cut(s)	553, 935
BbsI	GAAGAC	2 cut(s)	1857, 2328
Bbv12I	GWGCWC	4 cut(s)	633, 1631, 1772, 2549
BbvI	GCAGC	7 cut(s)	337, 831, 1396, 1594, 1729, 1732, 2284
BccI	CCATC	8 cut(s)	889, 1215, 1429, 1810, 1890, 1937, 2154, 2410
BciT130I	CCWGG	2 cut(s)	1146, 1163
BciVI	GTATCC	2 cut(s)	2277, 2413
BclI	TGATCA	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	2183
BcoDI	GTCTC	4 cut(s)	106, 146, 365, 538
BfaI	CTAG	8 cut(s)	195, 792, 828, 1074, 1553, 1833, 2241, 2424
BfmI	CTRYAG	2 cut(s)	2494, 2505
BfuI	GTATCC	2 cut(s)	2277, 2413
BglII	AGATCT	3 cut(s)	120, 493, 2426
BisI	GCNGC	8 cut(s)	351, 845, 1410, 1608, 1743, 1746, 2273, 2487
BlpI	GCTNAGC	1 cut(s)	1497
BlsI	GCNGC	8 cut(s)	352, 846, 1411, 1609, 1744, 1747, 2274, 2488
Bme1390I	CCNGG	3 cut(s)	1146, 1163, 2183
Bme18I	GGWCC	5 cut(s)	44, 66, 801, 1992, 2006
BmgT120I	GGNCC	6 cut(s)	44, 66, 801, 1159, 1992, 2006
BmiI	GGNNCC	5 cut(s)	171, 802, 1227, 1873, 2008
BmrFI	CCNGG	3 cut(s)	1146, 1163, 2183
BmrI	ACTGGG	1 cut(s)	1525
BmtI	GCTAGC	1 cut(s)	2244
BmuI	ACTGGG	1 cut(s)	1525
BoxI	GACNNNNGTC	1 cut(s)	1269
BpiI	GAAGAC	2 cut(s)	1857, 2328
Bpu10I	CCTNAGC	2 cut(s)	528, 974
Bpu1102I	GCTNAGC	1 cut(s)	1497
BpuEI	CTTGAG	3 cut(s)	721, 1494, 2140
BpuMI	CCSGG	1 cut(s)	2183
BsaAI	YACGTR	2 cut(s)	553, 935
BsaBI	GATNNNNATC	1 cut(s)	2431
BsaHI	GRCGYC	1 cut(s)	2024
BsaI	GGTCTC	1 cut(s)	365
BsaJI	CCNNGG	5 cut(s)	1055, 1144, 1161, 1615, 1858
BsaWI	WCCGGW	3 cut(s)	78, 1904, 2000
BsaXI	ACNNNNNCTCC	4 cut(s)	1182, 1212, 1628, 1658
Bsc4I	CCNNNNNNNGG	8 cut(s)	1156, 1235, 1487, 1907, 2059, 2108, 2128, 2182
Bse118I	RCCGGY	1 cut(s)	1904
Bse1I	ACTGG	6 cut(s)	21, 756, 987, 1247, 1520, 2500
Bse21I	CCTNAGG	1 cut(s)	1483
Bse3DI	GCAATG	3 cut(s)	69, 225, 1815
Bse8I	GATNNNNATC	1 cut(s)	2431
BseAI	TCCGGA	1 cut(s)	78
BseBI	CCWGG	2 cut(s)	1146, 1163
BseDI	CCNNGG	5 cut(s)	1055, 1144, 1161, 1615, 1858
BseGI	GGATG	2 cut(s)	190, 1207
BseJI	GATNNNNATC	1 cut(s)	2431
BseLI	CCNNNNNNNGG	8 cut(s)	1156, 1235, 1487, 1907, 2059, 2108, 2128, 2182
BseMI	GCAATG	3 cut(s)	69, 225, 1815
BseMII	CTCAG	9 cut(s)	519, 590, 608, 636, 1571, 1757, 1959, 2121, 2373
BseNI	ACTGG	6 cut(s)	21, 756, 987, 1247, 1520, 2500
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	2 cut(s)	558, 1631
BseXI	GCAGC	7 cut(s)	337, 831, 1396, 1594, 1729, 1732, 2284
BsgI	GTGCAG	1 cut(s)	1140
BshFI	GGCC	5 cut(s)	838, 1149, 1160, 1761, 2489
BshTI	ACCGGT	1 cut(s)	1904
BsiHKAI	GWGCWC	4 cut(s)	633, 1631, 1772, 2549
BsiSI	CCGG	5 cut(s)	79, 1905, 2001, 2183, 2276
BslFI	GGGAC	2 cut(s)	1252, 1277
BslI	CCNNNNNNNGG	8 cut(s)	1156, 1235, 1487, 1907, 2059, 2108, 2128, 2182
BsmAI	GTCTC	4 cut(s)	106, 146, 365, 538
BsmFI	GGGAC	2 cut(s)	1252, 1277
BsmI	GAATGC	1 cut(s)	1978
BsnI	GGCC	5 cut(s)	838, 1149, 1160, 1761, 2489
Bso31I	GGTCTC	1 cut(s)	365
Bsp1286I	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1772, 2549
Bsp13I	TCCGGA	1 cut(s)	78
Bsp1720I	GCTNAGC	1 cut(s)	1497
BspACI	CCGC	5 cut(s)	203, 1261, 1488, 2072, 2486
BspANI	GGCC	5 cut(s)	838, 1149, 1160, 1761, 2489
BspCNI	CTCAG	9 cut(s)	520, 591, 607, 635, 1570, 1758, 1960, 2120, 2374
BspEI	TCCGGA	1 cut(s)	78
BspHI	TCATGA	1 cut(s)	927
BspLI	GGNNCC	5 cut(s)	171, 802, 1227, 1873, 2008
BspOI	GCTAGC	1 cut(s)	2244
BspPI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1992
BspQI	GCTCTTC	1 cut(s)	621
BspTNI	GGTCTC	1 cut(s)	365
BsrDI	GCAATG	3 cut(s)	69, 225, 1815
BsrFI	RCCGGY	1 cut(s)	1904
BsrI	ACTGG	6 cut(s)	21, 756, 987, 1247, 1520, 2500
BssAI	RCCGGY	1 cut(s)	1904
BssECI	CCNNGG	5 cut(s)	1055, 1144, 1161, 1615, 1858
BssNI	GRCGYC	1 cut(s)	2024
BssSI	CACGAG	2 cut(s)	1064, 1821
BssT1I	CCWWGG	3 cut(s)	1055, 1615, 1858
Bst2BI	CACGAG	2 cut(s)	1064, 1821
Bst2UI	CCWGG	2 cut(s)	1146, 1163
Bst6I	CTCTTC	5 cut(s)	447, 621, 636, 914, 2547
BstACI	GRCGYC	1 cut(s)	2024
BstAPI	GCANNNNNTGC	2 cut(s)	877, 970
BstBAI	YACGTR	2 cut(s)	553, 935
BstC8I	GCNNGC	7 cut(s)	489, 651, 1419, 1545, 2242, 2491, 2561
BstENI	CCTNNNNNAGG	2 cut(s)	1154, 2106
BstF5I	GGATG	2 cut(s)	190, 1207
BstHHI	GCGC	1 cut(s)	1423
BstMAI	GTCTC	4 cut(s)	106, 146, 365, 538
BstNI	CCWGG	2 cut(s)	1146, 1163
BstNSI	RCATGY	2 cut(s)	520, 1714
BstPAI	GACNNNNGTC	1 cut(s)	1269
BstSCI	CCNGG	3 cut(s)	1144, 1161, 2181
BstSFI	CTRYAG	2 cut(s)	2494, 2505
BstSLI	GKGCMC	2 cut(s)	558, 1631
BstV1I	GCAGC	7 cut(s)	337, 831, 1396, 1594, 1729, 1732, 2284
BstV2I	GAAGAC	2 cut(s)	1857, 2328
BstX2I	RGATCY	6 cut(s)	120, 493, 1225, 1461, 1997, 2426
BstYI	RGATCY	6 cut(s)	120, 493, 1225, 1461, 1997, 2426
Bsu36I	CCTNAGG	1 cut(s)	1483
BsuI	GTATCC	2 cut(s)	2277, 2413
BsuRI	GGCC	5 cut(s)	838, 1149, 1160, 1761, 2489
BtgZI	GCGATG	2 cut(s)	1539, 2460
BtsCI	GGATG	2 cut(s)	190, 1207
BtsI	GCAGTG	2 cut(s)	1128, 2520
BtsIMutI	CAGTG	8 cut(s)	28, 749, 1128, 1254, 1789, 2242, 2370, 2520
Cac8I	GCNNGC	7 cut(s)	489, 651, 1419, 1545, 2242, 2491, 2561
CciI	TCATGA	1 cut(s)	927
CfoI	GCGC	1 cut(s)	1423
Cfr10I	RCCGGY	1 cut(s)	1904
Cfr13I	GGNCC	6 cut(s)	44, 66, 801, 1159, 1992, 2006
CseI	GACGC	1 cut(s)	2125
Csp6I	GTAC	2 cut(s)	2112, 2166
CspAI	ACCGGT	1 cut(s)	1904
CviQI	GTAC	2 cut(s)	2112, 2166
DraI	TTTAAA	1 cut(s)	1983
EaeI	YGGCCR	2 cut(s)	836, 2487
Eam1104I	CTCTTC	5 cut(s)	447, 621, 636, 914, 2547
EarI	CTCTTC	5 cut(s)	447, 621, 636, 914, 2547
EciI	GGCGGA	1 cut(s)	1503
Ecl136II	GAGCTC	2 cut(s)	631, 2547
Eco130I	CCWWGG	3 cut(s)	1055, 1615, 1858
Eco147I	AGGCCT	1 cut(s)	1149
Eco24I	GRGCYC	3 cut(s)	346, 633, 2549
Eco31I	GGTCTC	1 cut(s)	365
Eco47I	GGWCC	5 cut(s)	44, 66, 801, 1992, 2006
Eco53kI	GAGCTC	2 cut(s)	631, 2547
Eco57I	CTGAAG	4 cut(s)	2211, 2394, 2445, 2571
Eco72I	CACGTG	2 cut(s)	553, 935
Eco81I	CCTNAGG	1 cut(s)	1483
EcoICRI	GAGCTC	2 cut(s)	631, 2547
EcoNI	CCTNNNNNAGG	2 cut(s)	1154, 2106
EcoRI	GAATTC	3 cut(s)	1029, 1797, 1828
EcoRII	CCWGG	2 cut(s)	1144, 1161
EcoT14I	CCWWGG	3 cut(s)	1055, 1615, 1858
EcoT22I	ATGCAT	1 cut(s)	663
EcoT38I	GRGCYC	3 cut(s)	346, 633, 2549
ErhI	CCWWGG	3 cut(s)	1055, 1615, 1858
FalI	AAGNNNNNCTT	8 cut(s)	633, 665, 661, 693, 1842, 1874, 2250, 2282
FaqI	GGGAC	2 cut(s)	1252, 1277
FauI	CCCGC	2 cut(s)	210, 1254
FauNDI	CATATG	1 cut(s)	1588
FbaI	TGATCA	1 cut(s)	889
FblI	GTMKAC	3 cut(s)	1621, 1717, 2504
Fnu4HI	GCNGC	8 cut(s)	351, 845, 1410, 1608, 1743, 1746, 2273, 2487
FokI	GGATG	2 cut(s)	177, 1194
FriOI	GRGCYC	3 cut(s)	346, 633, 2549
Fsp4HI	GCNGC	8 cut(s)	351, 845, 1410, 1608, 1743, 1746, 2273, 2487
FspBI	CTAG	8 cut(s)	195, 792, 828, 1074, 1553, 1833, 2241, 2424
FspI	TGCGCA	1 cut(s)	1422
GlaI	GCGC	1 cut(s)	1422
GluI	GCNGC	8 cut(s)	351, 845, 1410, 1608, 1743, 1746, 2273, 2487
HaeIII	GGCC	5 cut(s)	838, 1149, 1160, 1761, 2489
HapII	CCGG	5 cut(s)	79, 1905, 2001, 2183, 2276
HgaI	GACGC	1 cut(s)	2125
HhaI	GCGC	1 cut(s)	1423
Hin1I	GRCGYC	1 cut(s)	2024
Hin6I	GCGC	1 cut(s)	1421
HinP1I	GCGC	1 cut(s)	1421
HindIII	AAGCTT	4 cut(s)	425, 647, 764, 1415
HpaII	CCGG	5 cut(s)	79, 1905, 2001, 2183, 2276
HphI	GGTGA	5 cut(s)	235, 1089, 1453, 2263, 2273
Hpy166II	GTNNAC	7 cut(s)	1622, 1629, 1718, 2006, 2168, 2233, 2505
Hpy8I	GTNNAC	7 cut(s)	1622, 1629, 1718, 2006, 2168, 2233, 2505
Hpy99I	CGWCG	3 cut(s)	450, 2026, 2119
HpyAV	CCTTC	3 cut(s)	57, 265, 2252
HpyCH4IV	ACGT	4 cut(s)	552, 934, 1104, 2024
HpySE526I	ACGT	4 cut(s)	552, 934, 1104, 2024
Hsp92I	GRCGYC	1 cut(s)	2024
HspAI	GCGC	1 cut(s)	1421
Kpn2I	TCCGGA	1 cut(s)	78
Ksp22I	TGATCA	1 cut(s)	889
LguI	GCTCTTC	1 cut(s)	621
LmnI	GCTCC	3 cut(s)	175, 1055, 2124
Lsp1109I	GCAGC	7 cut(s)	337, 831, 1396, 1594, 1729, 1732, 2284
MaeI	CTAG	8 cut(s)	195, 792, 828, 1074, 1553, 1833, 2241, 2424
MaeII	ACGT	4 cut(s)	552, 934, 1104, 2024
MaeIII	GTNAC	8 cut(s)	223, 512, 1123, 1454, 1528, 1931, 1955, 2251
MfeI	CAATTG	1 cut(s)	2123
MflI	RGATCY	6 cut(s)	120, 493, 1225, 1461, 1997, 2426
MhlI	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1772, 2549
MlsI	TGGCCA	1 cut(s)	838
MluNI	TGGCCA	1 cut(s)	838
MlyI	GAGTC	5 cut(s)	97, 614, 1697, 2356, 2393
MmeI	TCCRAC	1 cut(s)	44
Mox20I	TGGCCA	1 cut(s)	838
Mph1103I	ATGCAT	1 cut(s)	663
MroI	TCCGGA	1 cut(s)	78
MscI	TGGCCA	1 cut(s)	838
MseI	TTAA	9 cut(s)	744, 983, 995, 1218, 1367, 1982, 2097, 2367, 2474
MslI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
Msp20I	TGGCCA	1 cut(s)	838
MspA1I	CMGCKG	3 cut(s)	598, 2486, 2493
MspI	CCGG	5 cut(s)	79, 1905, 2001, 2183, 2276
MspR9I	CCNGG	3 cut(s)	1146, 1163, 2183
MunI	CAATTG	1 cut(s)	2123
Mva1269I	GAATGC	1 cut(s)	1978
MvaI	CCWGG	2 cut(s)	1146, 1163
NciI	CCSGG	1 cut(s)	2183
NdeI	CATATG	1 cut(s)	1588
NheI	GCTAGC	1 cut(s)	2240
NlaIV	GGNNCC	5 cut(s)	171, 802, 1227, 1873, 2008
NmuCI	GTSAC	4 cut(s)	223, 1123, 1955, 2251
NsbI	TGCGCA	1 cut(s)	1422
NsiI	ATGCAT	1 cut(s)	663
NspI	RCATGY	2 cut(s)	520, 1714
OliI	CACNNNNGTG	1 cut(s)	447
PagI	TCATGA	1 cut(s)	927
PceI	AGGCCT	1 cut(s)	1149
PciI	ACATGT	1 cut(s)	516
PciSI	GCTCTTC	1 cut(s)	621
PcsI	WCGNNNNNNNCGW	1 cut(s)	2403
PctI	GAATGC	1 cut(s)	1978
PfeI	GAWTC	8 cut(s)	153, 389, 614, 863, 1779, 1964, 2453, 2531
PflFI	GACNNNGTC	1 cut(s)	2048
PflMI	CCANNNNNTGG	1 cut(s)	2059
PinAI	ACCGGT	1 cut(s)	1904
PkrI	GCNGC	8 cut(s)	352, 846, 1411, 1609, 1744, 1747, 2274, 2488
PleI	GAGTC	5 cut(s)	97, 614, 1696, 2355, 2393
PmaCI	CACGTG	2 cut(s)	553, 935
PmlI	CACGTG	2 cut(s)	553, 935
PpsI	GAGTC	5 cut(s)	97, 614, 1696, 2355, 2393
Ppu21I	YACGTR	2 cut(s)	553, 935
PscI	ACATGT	1 cut(s)	516
PshAI	GACNNNNGTC	1 cut(s)	1269
PsiI	TTATAA	1 cut(s)	566
Psp124BI	GAGCTC	2 cut(s)	633, 2549
Psp6I	CCWGG	2 cut(s)	1144, 1161
PspCI	CACGTG	2 cut(s)	553, 935
PspGI	CCWGG	2 cut(s)	1144, 1161
PspN4I	GGNNCC	5 cut(s)	171, 802, 1227, 1873, 2008
PspPI	GGNCC	6 cut(s)	44, 66, 801, 1159, 1992, 2006
PsuI	RGATCY	6 cut(s)	120, 493, 1225, 1461, 1997, 2426
PsyI	GACNNNGTC	1 cut(s)	2048
PvuII	CAGCTG	2 cut(s)	598, 2493
RsaI	GTAC	2 cut(s)	2113, 2167
RsaNI	GTAC	2 cut(s)	2112, 2166
RseI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
SacI	GAGCTC	2 cut(s)	633, 2549
SapI	GCTCTTC	1 cut(s)	621
SaqAI	TTAA	9 cut(s)	744, 983, 995, 1218, 1367, 1982, 2097, 2367, 2474
SatI	GCNGC	8 cut(s)	351, 845, 1410, 1608, 1743, 1746, 2273, 2487
Sau96I	GGNCC	6 cut(s)	44, 66, 801, 1159, 1992, 2006
SchI	GAGTC	5 cut(s)	97, 614, 1697, 2356, 2393
ScrFI	CCNGG	3 cut(s)	1146, 1163, 2183
SduI	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1772, 2549
SfcI	CTRYAG	2 cut(s)	2494, 2505
SgrAI	CRCCGGYG	1 cut(s)	1904
SinI	GGWCC	5 cut(s)	44, 66, 801, 1992, 2006
SmiI	ATTTAAAT	1 cut(s)	1983
SmiMI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
SmlI	CTYRAG	3 cut(s)	700, 1509, 2155
SmoI	CTYRAG	3 cut(s)	700, 1509, 2155
SseBI	AGGCCT	1 cut(s)	1149
SsiI	CCGC	5 cut(s)	203, 1261, 1488, 2072, 2486
SspMI	CTAG	8 cut(s)	195, 792, 828, 1074, 1553, 1833, 2241, 2424
SstI	GAGCTC	2 cut(s)	633, 2549
StuI	AGGCCT	1 cut(s)	1149
StyD4I	CCNGG	3 cut(s)	1144, 1161, 2181
StyI	CCWWGG	3 cut(s)	1055, 1615, 1858
SwaI	ATTTAAAT	1 cut(s)	1983
TaiI	ACGT	4 cut(s)	555, 937, 1107, 2027
TaqI	TCGA	4 cut(s)	1027, 2043, 2397, 2406
TatI	WGTACW	1 cut(s)	2165
TauI	GCSGC	1 cut(s)	2489
TfiI	GAWTC	8 cut(s)	153, 389, 614, 863, 1779, 1964, 2453, 2531
Tru1I	TTAA	9 cut(s)	744, 983, 995, 1218, 1367, 1982, 2097, 2367, 2474
Tru9I	TTAA	9 cut(s)	744, 983, 995, 1218, 1367, 1982, 2097, 2367, 2474
TscAI	CASTG	8 cut(s)	28, 756, 1128, 1254, 1789, 2242, 2377, 2527
TseFI	GTSAC	4 cut(s)	223, 1123, 1955, 2251
TseI	GCWGC	7 cut(s)	350, 844, 1409, 1607, 1742, 1745, 2272
Tsp45I	GTSAC	4 cut(s)	223, 1123, 1955, 2251
TspDTI	ATGAA	8 cut(s)	30, 398, 402, 420, 646, 678, 719, 2029
TspRI	CASTG	8 cut(s)	28, 756, 1128, 1254, 1789, 2242, 2377, 2527
Tth111I	GACNNNGTC	1 cut(s)	2048
Van91I	CCANNNNNTGG	1 cut(s)	2059
VneI	GTGCAC	1 cut(s)	1627
VpaK11BI	GGWCC	5 cut(s)	44, 66, 801, 1992, 2006
XagI	CCTNNNNNAGG	2 cut(s)	1154, 2106
XceI	RCATGY	2 cut(s)	520, 1714
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1254, 1889
XmiI	GTMKAC	3 cut(s)	1621, 1717, 2504
XspI	CTAG	8 cut(s)	195, 792, 828, 1074, 1553, 1833, 2241, 2424
ZraI	GACGTC	1 cut(s)	2025
Zsp2I	ATGCAT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.