Rorug02G0252600

Triacylglycerol lipase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
26435057 .. 26435363
307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0252600.1

Sequence Viewer

Length: 255 bp
ATGAATCAATATGTTAATAAGAAGTTCAGCAATCAATACAAGGCGACTATTGGAGCTGATTTCTTGACGAAAGAAGTGCAGTTCGAAGATAGGCTCTTCACCTTACAGATCTGGGATACCGCTGGTCAAGAACGGTTTCAGAGCCTTGGTGTAGCATTTTATCGCGGTGCTGATTGCTGTGTTCTTGTTTATGACGTTAATTCAATGAAATCTTTTGATAACCTGATTTCAATCAACAACAAGAGAGCATTTTGA

Protein Analysis

84

Amino Acids

9.76

Weight (kDa)

7.74

Isoelectric Point (pI)

24.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Roc PF08477 1 - 74 1.6e-19 Ras of Complex, Roc, domain of DAPkinase
Ras PF00071 2 - 76 6.9e-27 Ras family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 165
AciI CCGC 2 cut(s) 120, 165
AgsI TTSAA 2 cut(s) 204, 231
AluBI AGCT 1 cut(s) 56
AluI AGCT 1 cut(s) 56
Asp700I GAANNNNTTC 1 cut(s) 135
AsuHPI GGTGA 1 cut(s) 91
AsuII TTCGAA 1 cut(s) 84
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BciVI GTATCC 1 cut(s) 109
BfuI GTATCC 1 cut(s) 109
BglII AGATCT 1 cut(s) 108
Bpu14I TTCGAA 1 cut(s) 84
BsaBI GATNNNNATC 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 145
Bse8I GATNNNNATC 1 cut(s) 230
BseDI CCNNGG 1 cut(s) 145
BseJI GATNNNNATC 1 cut(s) 230
BsgI GTGCAG 1 cut(s) 98
Bsh1236I CGCG 1 cut(s) 165
Bsp119I TTCGAA 1 cut(s) 84
Bsp143I GATC 1 cut(s) 108
BspACI CCGC 2 cut(s) 120, 165
BspFNI CGCG 1 cut(s) 165
BspQI GCTCTTC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 84
BssECI CCNNGG 1 cut(s) 145
BssMI GATC 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 145
Bst4CI ACNGT 1 cut(s) 135
Bst6I CTCTTC 1 cut(s) 101
BstBI TTCGAA 1 cut(s) 84
BstFNI CGCG 1 cut(s) 165
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
BstUI CGCG 1 cut(s) 165
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BsuI GTATCC 1 cut(s) 109
CviJI RGCY 3 cut(s) 56, 94, 144
CviKI_1 RGCY 3 cut(s) 56, 94, 144
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
Eam1104I CTCTTC 1 cut(s) 101
EarI CTCTTC 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 145
EcoT14I CCWWGG 1 cut(s) 145
ErhI CCWWGG 1 cut(s) 145
FaiI YATR 2 cut(s) 12, 192
HinfI GANTC 1 cut(s) 4
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 141
Hpy188III TCNNGA 2 cut(s) 64, 128
HpyCH4III ACNGT 1 cut(s) 135
HpyCH4IV ACGT 1 cut(s) 195
HpyCH4V TGCA 1 cut(s) 79
HpySE526I ACGT 1 cut(s) 195
Kzo9I GATC 1 cut(s) 108
LguI GCTCTTC 1 cut(s) 101
LmnI GCTCC 1 cut(s) 53
LpnPI CCDG 3 cut(s) 97, 108, 236
MaeII ACGT 1 cut(s) 195
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 2 cut(s) 88, 98
MflI RGATCY 1 cut(s) 108
MluCI AATT 1 cut(s) 199
MroXI GAANNNNTTC 1 cut(s) 135
MseI TTAA 2 cut(s) 15, 198
MspA1I CMGCKG 1 cut(s) 122
MvnI CGCG 1 cut(s) 165
NdeII GATC 1 cut(s) 108
NspV TTCGAA 1 cut(s) 84
PciSI GCTCTTC 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 135
PfeI GAWTC 1 cut(s) 4
PsuI RGATCY 1 cut(s) 108
SapI GCTCTTC 1 cut(s) 101
SaqAI TTAA 2 cut(s) 15, 198
Sau3AI GATC 1 cut(s) 108
SetI ASST 4 cut(s) 58, 104, 198, 225
SfuI TTCGAA 1 cut(s) 84
SgeI CNNG 9 cut(s) 52, 76, 124, 135, 140, 158, 176, 197, 235
Sse9I AATT 1 cut(s) 199
SsiI CCGC 2 cut(s) 120, 165
StyI CCWWGG 1 cut(s) 145
TaaI ACNGT 1 cut(s) 135
TaiI ACGT 1 cut(s) 198
TaqI TCGA 1 cut(s) 84
TasI AATT 1 cut(s) 199
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 2 cut(s) 15, 198
Tru9I TTAA 2 cut(s) 15, 198
TspDTI ATGAA 2 cut(s) 17, 221
XmnI GAANNNNTTC 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.