Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007372

Physical Location & Seq

Genomic Coordinates Reverse (-)

51591074 .. 51595916

Gene Structure 4843 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00119660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGATATAAGTAATGAAGCCAGTGTTGATCCATTTCCTATCGGCCCTTCAACCTTTGTTGGTCGGACCATTGCTTTCCGGGTTTTGTTCTGCAAGTCAATGTCGCATTTGAGACATCAAATCTTTCATTTGTTGTTTAGCCTCGTCTTTAGATTCAGGGACTTTTTGGCTCCTATGTTCTCATGGTTGCATCCTCGAAACCCGCAAGGGATATTGGCAATGGTGACAATCATCGCCTTTCTGTTGAAACGATACACAAATGTAAAAGTGAAGGCTGAAATGGCTTATCGGAGGAAATTTTGGAGAAATATGATGAGGACTGCATTGACATATGAGGAGTGGGCTCATGCTGCTAAAATGCTTGATAAAGAGACCCCAAAGATGAATGAATCAGACCTTTATGATGAAGAAGTGGTTAAGAACAAGCTTCAAGAACTCCACCACCGTCGTGAAGAGGGTTCTCTCCGAGATATAATATTCTGTATGCGAGCAGATCTTGTTAGAAATCTGGGTAACATGTGCAACCCTGAGCTTCACAAGGGGAGACTTCATGTGCCCAAACTTATAAAGGAATATATTGATGAGGTCTCAACTCAGTTGAGAATGGTTTGCGATTCAGACTCAGAAGAGCTCTCATTGGAAGAGAAGCTTGCTTTCATGCATGAAACAAGACACGCTTTTGGGAGAACTGCCTTGCTCTTGAGTGGGGGTGCTTCTCTTGGATCGTTTCATGTCGGTGTAGTTAAAACGCTGGTGGAACATAAGCTTATGCCCAGAATAATTGCTGGTTCTAGTGTGGGGTCCATTATGTGTTCTGTTGTTGCCACTAGGTCTTGGCCAGAGCTGCAAAGTTTTTTTGAGGATTCTTGGCACTCGTTGCAGTTTTTTGATCAGATGGGTGGGATTTTTACAGTTGTGAAGAGGGTCATGACTCGTGGAGCTGTCCATGAGATCAGGCAGTTGCAAATGATGTTAAGGCATTTAACCAGTAATCTAACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACTGTTTGCTCCCCAAGGAAGCATGAGCCACCTAGATGCCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCAGTGACAGCTTCTTGTGCTTTCCCAGGCCTTTTTGAGGCCCAGGAGCTAATGGCGAAAGATAGAAGTGGTGAGATTGTTCCTTATCATCCTCCATTTAATTTGGGTCCAGAGGCAGGGACAATGCCAGTGCGCAGGTGGCGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGCTAAAAGAATTGTTCAACGTTAATCATTTTATAGTCAGTCAGGCAAATCCTCATATTGCACCATTATTAAGACTAAAGGAATTTGTGAGAGCTTGTGGAGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTTGAGATGGAGGTTAAACATAGATGTAACCAGATCCTGGAACTTGGTTTTCCATTAGGTGGACTTGCAAAGCTGTTTGCTCAAGATTGGGAGGGTGATGTTACTGTTGTGATGCCTGCCACACTAGCTCAGTATTCAAAAATTATACAAAACCCAACATATGTTGAGCTTCAAAAGGCAGCTAACCAAGGTAGACGGTGCACTTGGGAGAAACTGTCAGCCATAAAAGCAAACTGTGGCATTGAGCTTGCTCTTGATGAGTCTGTAGTTATTCTCAATCACATGCGTAGACTGAAAAGGAGTGCTGAAAGAGCTGCTGCTTCTTCTCATGGCCTACCTAGCACGGTCAGGTTCAGTGCATCAAGAAGAATTCCATCTTGGAATTGCATTGCTCGTGAGAATTCTAGTGGTTCCCTTGAAGAAGACCTCCTTGGAGATGCTGGTTCCTCATTCCATCATGGAGTTGGTCCATCCACCAGCGGTAAAATCTTCCATACCCACCGTAATATACATGATGGTCATGGAAGTGACAGCGAATCTGAGAGTGCCGATTTAAATTCTTGGACAAGATCTGGTGGACCCTTGATGAGGACGACATCAGCAACTAAATTCATCGACTTTGTCCAAAACTTGGACGTTGATGCTGAACTGAACAGAGGTTTGTTGGTTAATCCTAACTCAGTTGCGACGCTTCAGTTGGGGGGCAGTAATCAATACTATCACAGCCCAAGGGGGACCACACCAGACCGTAGCCCTGACAGCACAAAATTTGATAAGAGGGATTTCGCGAGTGTGGCTTCAGTAAACGGTTCTAGCATTATGGTGACAGCAGGTGATCTTTTGCAGCCGGAAAGGATACATAACGGGATTGTGTTCAATGTTGTAAAGAAAGAAGACTTGTCATTGTCAAGTAGTAGGAGTCAGGATATGGAAAATTATAACAGTGAAGTTGCTGAGTGTGTGCAACTTGACTCTCTTGAAAAGGAGATGGATACTAGATCTGCATCTGAATATGGCGATGCTGATACTGCTTCAGAAATCGGGTTAAATGATACAGCACCTTGTCAGTCCACAGATCAATCTAACATTGCTGATGATTCTAATAATCAGAGCTCTGCAGAGTGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012511 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019433 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044424 GO:0044464 GO:0046461 GO:0046464 GO:0046486 GO:0046503 GO:0052689 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00100 ko00561 ko00564 ko00565 ko00590 ko00591 ko00592 ko01100 ko01110 map00100 map00561 map00564 map00565 map00590 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

DUF3336 Patatin

Protein Analysis

852

Amino Acids

95.47

Weight (kDa)

6.57

Isoelectric Point (pI)

48.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3336	PF11815	94 - 225	3.1e-32	Domain of unknown function (DUF3336)
Patatin	PF01734	232 - 404	9.6e-19	Patatin-like phospholipase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04040 AT5G04040
fragaria_vesca	FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040
malus_domestica	MD12G1087400.v1.1 MD14G1083100.v1.1
prunus_persica	Prupe.7G047400_v2.0.a1
pyrus_communis	pycom12g07540 pycom14g07220
rosa_chinensis	RchiOBHm_Chr2g0124811
rosa_laevigata	RLG00000018823
rosa_multiflora	Rmu_sc0002939.1_g000008
rosa_roxburghii	Rroxscaffold_2G00119660
rosa_rugosa	Rorug02G0252600 Rorug02G0252700 Rorug02G0252800
rosa_samantha	Rh2AG312300 Rh2BG320500 Rh2CG300500 Rh2DG337700
rosa_wichuraiana	Rw2G025220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	566, 2367
AarI	CACCTGC	2 cut(s)	1245, 2249
Acc16I	TGCGCA	1 cut(s)	1253
Acc36I	ACCTGC	2 cut(s)	1245, 2249
AccB7I	CCANNNNNTGG	3 cut(s)	1465, 1487, 2059
AccI	GTMKAC	2 cut(s)	1621, 1717
AccII	CGCG	1 cut(s)	2216
AciI	CCGC	3 cut(s)	203, 1261, 1908
AclI	AACGTT	1 cut(s)	1317
AclWI	GGATC	3 cut(s)	23, 730, 1456
AcoI	YGGCCR	1 cut(s)	836
AcsI	RAATTY	8 cut(s)	296, 1029, 1379, 1797, 1828, 1984, 2036, 2195
AcuI	CTGAAG	3 cut(s)	2105, 2211, 2445
AfiI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 2016, 2059
AflIII	ACRYGT	1 cut(s)	516
AjnI	CCWGG	3 cut(s)	1144, 1161, 1464
AjuI	GAANNNNNNNTTGG	4 cut(s)	1789, 1821, 1842, 1874
AleI	CACNNNNGTG	1 cut(s)	447
Alw21I	GWGCWC	3 cut(s)	633, 1631, 2543
Alw26I	GTCTC	4 cut(s)	106, 365, 538, 592
Alw44I	GTGCAC	1 cut(s)	1627
AlwI	GGATC	3 cut(s)	23, 730, 1456
AlwNI	CAGNNNCTG	1 cut(s)	1465
AoxI	GGCC	5 cut(s)	43, 836, 1147, 1158, 1759
ApaLI	GTGCAC	1 cut(s)	1627
ApeKI	GCWGC	8 cut(s)	350, 844, 1297, 1409, 1607, 1742, 1745, 2272
ApoI	RAATTY	8 cut(s)	296, 1029, 1379, 1797, 1828, 1984, 2036, 2195
AspLEI	GCGC	1 cut(s)	1254
AspS9I	GGNCC	8 cut(s)	44, 66, 801, 1159, 1226, 1895, 2006, 2163
AsuC2I	CCSGG	1 cut(s)	80
AsuHPI	GGTGA	6 cut(s)	235, 1089, 1202, 1535, 2263, 2273
AvaII	GGWCC	6 cut(s)	66, 801, 1226, 1895, 2006, 2163
BaeGI	GKGCMC	2 cut(s)	558, 1631
BalI	TGGCCA	1 cut(s)	838
BanII	GRGCYC	3 cut(s)	346, 633, 2543
BauI	CACGAG	2 cut(s)	933, 1821
BbsI	GAAGAC	2 cut(s)	1857, 2328
Bbv12I	GWGCWC	3 cut(s)	633, 1631, 2543
BbvI	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1729, 1732, 2284
BccI	CCATC	8 cut(s)	889, 1259, 1429, 1810, 1890, 1906, 1937, 2410
BciT130I	CCWGG	3 cut(s)	1146, 1163, 1466
BciVI	GTATCC	2 cut(s)	2277, 2413
BclI	TGATCA	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	80
BcoDI	GTCTC	4 cut(s)	106, 365, 538, 592
BfaI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1767, 1833, 2241, 2424
BfmI	CTRYAG	2 cut(s)	1692, 2544
BfuAI	ACCTGC	2 cut(s)	1245, 2249
BfuI	GTATCC	2 cut(s)	2277, 2413
BglII	AGATCT	3 cut(s)	493, 1997, 2426
BisI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1743, 1746, 2273
BlsI	GCNGC	8 cut(s)	352, 846, 1299, 1411, 1609, 1744, 1747, 2274
Bme1390I	CCNGG	4 cut(s)	80, 1146, 1163, 1466
Bme18I	GGWCC	6 cut(s)	66, 801, 1226, 1895, 2006, 2163
BmgT120I	GGNCC	8 cut(s)	44, 66, 801, 1159, 1226, 1895, 2006, 2163
BmiI	GGNNCC	7 cut(s)	171, 802, 1227, 1840, 1873, 2008, 2164
BmrFI	CCNGG	4 cut(s)	80, 1146, 1163, 1466
BmsI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1796, 1855, 2059, 2437, 2441
BpiI	GAAGAC	2 cut(s)	1857, 2328
Bpu10I	CCTNAGC	1 cut(s)	528
BpuEI	CTTGAG	2 cut(s)	721, 1494
BpuMI	CCSGG	1 cut(s)	80
BsaBI	GATNNNNATC	1 cut(s)	2431
BsaI	GGTCTC	2 cut(s)	365, 592
BsaJI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1858, 2156
BsaXI	ACNNNNNCTCC	2 cut(s)	1628, 1658
Bsc4I	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 2016, 2059
Bse1I	ACTGG	3 cut(s)	21, 987, 1247
Bse3DI	GCAATG	4 cut(s)	69, 225, 1815, 2514
Bse8I	GATNNNNATC	1 cut(s)	2431
BseBI	CCWGG	3 cut(s)	1146, 1163, 1466
BseDI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1858, 2156
BseGI	GGATG	4 cut(s)	190, 1207, 1270, 1898
BseJI	GATNNNNATC	1 cut(s)	2431
BseLI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 2016, 2059
BseMI	GCAATG	4 cut(s)	69, 225, 1815, 2514
BseMII	CTCAG	7 cut(s)	519, 608, 636, 1571, 1959, 2121, 2373
BseNI	ACTGG	3 cut(s)	21, 987, 1247
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	2 cut(s)	558, 1631
BseXI	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1729, 1732, 2284
BsgI	GTGCAG	1 cut(s)	1140
Bsh1236I	CGCG	1 cut(s)	2216
BshFI	GGCC	5 cut(s)	45, 838, 1149, 1160, 1761
BsiHKAI	GWGCWC	3 cut(s)	633, 1631, 2543
BsiSI	CCGG	2 cut(s)	79, 2276
BslFI	GGGAC	3 cut(s)	173, 1252, 2176
BslI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 2016, 2059
BsmAI	GTCTC	4 cut(s)	106, 365, 538, 592
BsmFI	GGGAC	3 cut(s)	173, 1252, 2176
BsnI	GGCC	5 cut(s)	45, 838, 1149, 1160, 1761
Bso31I	GGTCTC	2 cut(s)	365, 592
Bsp1286I	GDGCHC	5 cut(s)	346, 558, 633, 1631, 2543
Bsp68I	TCGCGA	1 cut(s)	2216
BspACI	CCGC	3 cut(s)	203, 1261, 1908
BspANI	GGCC	5 cut(s)	45, 838, 1149, 1160, 1761
BspCNI	CTCAG	7 cut(s)	520, 607, 635, 1570, 1960, 2120, 2374
BspFNI	CGCG	1 cut(s)	2216
BspHI	TCATGA	1 cut(s)	927
BspLI	GGNNCC	7 cut(s)	171, 802, 1227, 1840, 1873, 2008, 2164
BspMAI	CTGCAG	1 cut(s)	2548
BspMI	ACCTGC	2 cut(s)	1245, 2249
BspPI	GGATC	3 cut(s)	23, 730, 1456
BspQI	GCTCTTC	1 cut(s)	621
BspTNI	GGTCTC	2 cut(s)	365, 592
BsrDI	GCAATG	4 cut(s)	69, 225, 1815, 2514
BsrI	ACTGG	3 cut(s)	21, 987, 1247
BssECI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1858, 2156
BssSI	CACGAG	2 cut(s)	933, 1821
BssT1I	CCWWGG	4 cut(s)	1055, 1615, 1858, 2156
Bst2BI	CACGAG	2 cut(s)	933, 1821
Bst2UI	CCWGG	3 cut(s)	1146, 1163, 1466
Bst6I	CTCTTC	4 cut(s)	447, 621, 636, 914
BstAPI	GCANNNNNTGC	1 cut(s)	877
BstC8I	GCNNGC	5 cut(s)	489, 651, 1419, 1545, 1677
BstDEI	CTNAG	7 cut(s)	528, 594, 622, 1557, 1968, 2107, 2382
BstENI	CCTNNNNNAGG	2 cut(s)	1154, 2014
BstF5I	GGATG	4 cut(s)	190, 1207, 1270, 1898
BstFNI	CGCG	1 cut(s)	2216
BstHHI	GCGC	1 cut(s)	1254
BstMAI	GTCTC	4 cut(s)	106, 365, 538, 592
BstNI	CCWGG	3 cut(s)	1146, 1163, 1466
BstNSI	RCATGY	2 cut(s)	520, 1714
BstSCI	CCNGG	4 cut(s)	78, 1144, 1161, 1464
BstSFI	CTRYAG	2 cut(s)	1692, 2544
BstSLI	GKGCMC	2 cut(s)	558, 1631
BstUI	CGCG	1 cut(s)	2216
BstV1I	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1729, 1732, 2284
BstV2I	GAAGAC	2 cut(s)	1857, 2328
BstX2I	RGATCY	4 cut(s)	493, 1461, 1997, 2426
BstYI	RGATCY	4 cut(s)	493, 1461, 1997, 2426
BsuI	GTATCC	2 cut(s)	2277, 2413
BsuRI	GGCC	5 cut(s)	45, 838, 1149, 1160, 1761
BtgZI	GCGATG	2 cut(s)	217, 2460
BtsCI	GGATG	4 cut(s)	190, 1207, 1270, 1898
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	5 cut(s)	28, 1128, 1254, 1789, 2377
BtuMI	TCGCGA	1 cut(s)	2216
BveI	ACCTGC	2 cut(s)	1245, 2249
Cac8I	GCNNGC	5 cut(s)	489, 651, 1419, 1545, 1677
CaiI	CAGNNNCTG	1 cut(s)	1465
CciI	TCATGA	1 cut(s)	927
CfoI	GCGC	1 cut(s)	1254
Cfr13I	GGNCC	8 cut(s)	44, 66, 801, 1159, 1226, 1895, 2006, 2163
CseI	GACGC	1 cut(s)	2125
DdeI	CTNAG	7 cut(s)	528, 594, 622, 1557, 1968, 2107, 2382
DraI	TTTAAA	1 cut(s)	1983
EaeI	YGGCCR	1 cut(s)	836
Eam1104I	CTCTTC	4 cut(s)	447, 621, 636, 914
EarI	CTCTTC	4 cut(s)	447, 621, 636, 914
Ecl136II	GAGCTC	2 cut(s)	631, 2541
Eco130I	CCWWGG	4 cut(s)	1055, 1615, 1858, 2156
Eco147I	AGGCCT	1 cut(s)	1149
Eco24I	GRGCYC	3 cut(s)	346, 633, 2543
Eco31I	GGTCTC	2 cut(s)	365, 592
Eco47I	GGWCC	6 cut(s)	66, 801, 1226, 1895, 2006, 2163
Eco53kI	GAGCTC	2 cut(s)	631, 2541
Eco57I	CTGAAG	3 cut(s)	2105, 2211, 2445
EcoICRI	GAGCTC	2 cut(s)	631, 2541
EcoNI	CCTNNNNNAGG	2 cut(s)	1154, 2014
EcoRI	GAATTC	3 cut(s)	1029, 1797, 1828
EcoRII	CCWGG	3 cut(s)	1144, 1161, 1464
EcoT14I	CCWWGG	4 cut(s)	1055, 1615, 1858, 2156
EcoT22I	ATGCAT	1 cut(s)	663
EcoT38I	GRGCYC	3 cut(s)	346, 633, 2543
ErhI	CCWWGG	4 cut(s)	1055, 1615, 1858, 2156
FalI	AAGNNNNNCTT	6 cut(s)	633, 665, 661, 693, 1842, 1874
FaqI	GGGAC	3 cut(s)	173, 1252, 2176
FauI	CCCGC	2 cut(s)	210, 1254
FauNDI	CATATG	2 cut(s)	331, 1588
FbaI	TGATCA	1 cut(s)	889
FblI	GTMKAC	2 cut(s)	1621, 1717
Fnu4HI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1743, 1746, 2273
FokI	GGATG	4 cut(s)	177, 1194, 1277, 1885
FriOI	GRGCYC	3 cut(s)	346, 633, 2543
Fsp4HI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1743, 1746, 2273
FspBI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1767, 1833, 2241, 2424
FspI	TGCGCA	1 cut(s)	1253
GlaI	GCGC	1 cut(s)	1253
GluI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1743, 1746, 2273
HaeIII	GGCC	5 cut(s)	45, 838, 1149, 1160, 1761
HapII	CCGG	2 cut(s)	79, 2276
HgaI	GACGC	1 cut(s)	2125
HhaI	GCGC	1 cut(s)	1254
Hin6I	GCGC	1 cut(s)	1252
HinP1I	GCGC	1 cut(s)	1252
HindIII	AAGCTT	5 cut(s)	425, 647, 764, 1008, 1415
HpaII	CCGG	2 cut(s)	79, 2276
HphI	GGTGA	6 cut(s)	235, 1089, 1202, 1535, 2263, 2273
Hpy166II	GTNNAC	7 cut(s)	1490, 1622, 1629, 1718, 2006, 2233, 2499
Hpy8I	GTNNAC	7 cut(s)	1490, 1622, 1629, 1718, 2006, 2233, 2499
Hpy99I	CGWCG	2 cut(s)	450, 2119
HpyAV	CCTTC	2 cut(s)	57, 265
HpyCH4IV	ACGT	2 cut(s)	1317, 2064
HpyF3I	CTNAG	7 cut(s)	528, 594, 622, 1557, 1968, 2107, 2382
HpySE526I	ACGT	2 cut(s)	1317, 2064
HspAI	GCGC	1 cut(s)	1252
Ksp22I	TGATCA	1 cut(s)	889
LguI	GCTCTTC	1 cut(s)	621
LmnI	GCTCC	4 cut(s)	175, 938, 1055, 1165
Lsp1109I	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1729, 1732, 2284
LweI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1796, 1855, 2059, 2437, 2441
MaeI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1767, 1833, 2241, 2424
MaeII	ACGT	2 cut(s)	1317, 2064
MaeIII	GTNAC	7 cut(s)	223, 512, 1123, 1454, 1528, 1955, 2251
MflI	RGATCY	4 cut(s)	493, 1461, 1997, 2426
MhlI	GDGCHC	5 cut(s)	346, 558, 633, 1631, 2543
MlsI	TGGCCA	1 cut(s)	838
MluNI	TGGCCA	1 cut(s)	838
MlyI	GAGTC	5 cut(s)	614, 925, 1697, 2356, 2393
MmeI	TCCRAC	1 cut(s)	44
Mox20I	TGGCCA	1 cut(s)	838
Mph1103I	ATGCAT	1 cut(s)	663
MscI	TGGCCA	1 cut(s)	838
MslI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
Msp20I	TGGCCA	1 cut(s)	838
MspA1I	CMGCKG	1 cut(s)	1908
MspI	CCGG	2 cut(s)	79, 2276
MspR9I	CCNGG	4 cut(s)	80, 1146, 1163, 1466
MvaI	CCWGG	3 cut(s)	1146, 1163, 1466
MvnI	CGCG	1 cut(s)	2216
NciI	CCSGG	1 cut(s)	80
NdeI	CATATG	2 cut(s)	331, 1588
NlaIV	GGNNCC	7 cut(s)	171, 802, 1227, 1840, 1873, 2008, 2164
NmuCI	GTSAC	4 cut(s)	223, 1123, 1955, 2251
NruI	TCGCGA	1 cut(s)	2216
NsbI	TGCGCA	1 cut(s)	1253
NsiI	ATGCAT	1 cut(s)	663
NspI	RCATGY	2 cut(s)	520, 1714
OliI	CACNNNNGTG	1 cut(s)	447
PagI	TCATGA	1 cut(s)	927
PaqCI	CACCTGC	2 cut(s)	1245, 2249
PceI	AGGCCT	1 cut(s)	1149
PciI	ACATGT	1 cut(s)	516
PciSI	GCTCTTC	1 cut(s)	621
PfeI	GAWTC	6 cut(s)	153, 389, 614, 863, 1964, 2525
PflFI	GACNNNGTC	1 cut(s)	2048
PflMI	CCANNNNNTGG	3 cut(s)	1465, 1487, 2059
PfoI	TCCNGGA	1 cut(s)	1464
PkrI	GCNGC	8 cut(s)	352, 846, 1299, 1411, 1609, 1744, 1747, 2274
PleI	GAGTC	5 cut(s)	614, 925, 1696, 2355, 2393
PpsI	GAGTC	5 cut(s)	614, 925, 1696, 2355, 2393
PscI	ACATGT	1 cut(s)	516
PsiI	TTATAA	2 cut(s)	566, 2367
Psp124BI	GAGCTC	2 cut(s)	633, 2543
Psp1406I	AACGTT	1 cut(s)	1317
Psp6I	CCWGG	3 cut(s)	1144, 1161, 1464
PspGI	CCWGG	3 cut(s)	1144, 1161, 1464
PspN4I	GGNNCC	7 cut(s)	171, 802, 1227, 1840, 1873, 2008, 2164
PspPI	GGNCC	8 cut(s)	44, 66, 801, 1159, 1226, 1895, 2006, 2163
PstI	CTGCAG	1 cut(s)	2548
PstNI	CAGNNNCTG	1 cut(s)	1465
PsuI	RGATCY	4 cut(s)	493, 1461, 1997, 2426
PsyI	GACNNNGTC	1 cut(s)	2048
RruI	TCGCGA	1 cut(s)	2216
RseI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
SacI	GAGCTC	2 cut(s)	633, 2543
SapI	GCTCTTC	1 cut(s)	621
SatI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1743, 1746, 2273
Sau96I	GGNCC	8 cut(s)	44, 66, 801, 1159, 1226, 1895, 2006, 2163
SchI	GAGTC	5 cut(s)	614, 925, 1697, 2356, 2393
ScrFI	CCNGG	4 cut(s)	80, 1146, 1163, 1466
SduI	GDGCHC	5 cut(s)	346, 558, 633, 1631, 2543
SfaNI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1796, 1855, 2059, 2437, 2441
SfcI	CTRYAG	2 cut(s)	1692, 2544
SinI	GGWCC	6 cut(s)	66, 801, 1226, 1895, 2006, 2163
SmiI	ATTTAAAT	1 cut(s)	1983
SmiMI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1953, 2249
SmlI	CTYRAG	2 cut(s)	700, 1509
SmoI	CTYRAG	2 cut(s)	700, 1509
SseBI	AGGCCT	1 cut(s)	1149
SsiI	CCGC	3 cut(s)	203, 1261, 1908
SspI	AATATT	1 cut(s)	477
SspMI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1767, 1833, 2241, 2424
SstI	GAGCTC	2 cut(s)	633, 2543
StuI	AGGCCT	1 cut(s)	1149
StyD4I	CCNGG	4 cut(s)	78, 1144, 1161, 1464
StyI	CCWWGG	4 cut(s)	1055, 1615, 1858, 2156
SwaI	ATTTAAAT	1 cut(s)	1983
TaiI	ACGT	2 cut(s)	1320, 2067
TaqI	TCGA	3 cut(s)	196, 1027, 2043
TfiI	GAWTC	6 cut(s)	153, 389, 614, 863, 1964, 2525
TscAI	CASTG	5 cut(s)	28, 1128, 1254, 1789, 2377
TseFI	GTSAC	4 cut(s)	223, 1123, 1955, 2251
TseI	GCWGC	8 cut(s)	350, 844, 1297, 1409, 1607, 1742, 1745, 2272
Tsp45I	GTSAC	4 cut(s)	223, 1123, 1955, 2251
TspRI	CASTG	5 cut(s)	28, 1128, 1254, 1789, 2377
Tth111I	GACNNNGTC	1 cut(s)	2048
Van91I	CCANNNNNTGG	3 cut(s)	1465, 1487, 2059
VneI	GTGCAC	1 cut(s)	1627
VpaK11BI	GGWCC	6 cut(s)	66, 801, 1226, 1895, 2006, 2163
XagI	CCTNNNNNAGG	2 cut(s)	1154, 2014
XapI	RAATTY	8 cut(s)	296, 1029, 1379, 1797, 1828, 1984, 2036, 2195
XceI	RCATGY	2 cut(s)	520, 1714
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1254, 1889
XmiI	GTMKAC	2 cut(s)	1621, 1717
XspI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1767, 1833, 2241, 2424
Zsp2I	ATGCAT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.