Rorug02G0252700

Triacylglycerol lipase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
26445259 .. 26446956
1698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0252700.1

Sequence Viewer

Length: 474 bp
ATGGAATCATACCCTTGCCACGACATTCAGTTCCTCGATTTCGAGGGTTTCTCTAGTTTCCAGTATTGCCCTCTTCAGTTTGATTTGGAGTGTGATCCTTGCCAATTAAAGGGTATCAGTCACCCCAATGAACCCAGAGCCAAGCTTGTGGTTGATCACTCTTGCAGGCATCCTTGCGACGCAGGGCATTGCATATATATAGGAGTGGTCTACTTGGTGATGATCACAGCTTCGCCCAATCTAGAGGTTCACGATCTGGATGAGCTACCGGAGCAGTGGCGGAGGTTCAAGCTGGCTTGGCTTTGTAAGGAGCTGCCGTCGCATAATTCCGGGGCTTTGATTCAGATTAAGGATTATGATACCAAGAAGTCTGGTATTTTGAAAGAAATCTGCAGAAACTGTCCTGCAGTACAGCCTTCTTTGGTTGACCATGCTGCTGAGAAAGTACGTGTGGAGGTATTCATAGACTGTTAA

Protein Analysis

157

Amino Acids

17.95

Weight (kDa)

5.39

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 210
AciI CCGC 1 cut(s) 280
AclWI GGATC 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 59
AfaI GTAC 2 cut(s) 411, 447
AfiI CCNNNNNNNGG 1 cut(s) 109
AflIII ACRYGT 1 cut(s) 448
AgsI TTSAA 2 cut(s) 289, 382
AluBI AGCT 5 cut(s) 145, 230, 265, 292, 313
AluI AGCT 5 cut(s) 145, 230, 265, 292, 313
AlwI GGATC 1 cut(s) 89
AlwNI CAGNNNCTG 1 cut(s) 399
ApeKI GCWGC 2 cut(s) 313, 434
AsuC2I CCSGG 1 cut(s) 331
AsuHPI GGTGA 2 cut(s) 113, 229
BbvI GCAGC 2 cut(s) 300, 421
BceAI ACGGC 1 cut(s) 301
BclI TGATCA 2 cut(s) 154, 222
BcnI CCSGG 1 cut(s) 331
BfaI CTAG 2 cut(s) 54, 242
BfmI CTRYAG 2 cut(s) 391, 405
BisI GCNGC 2 cut(s) 314, 435
BlsI GCNGC 2 cut(s) 315, 436
Bme1390I CCNGG 1 cut(s) 331
BmrFI CCNGG 1 cut(s) 331
BmsI GCATC 1 cut(s) 178
BplI GAGNNNNNCTC 2 cut(s) 35, 67
BpuMI CCSGG 1 cut(s) 331
BsaAI YACGTR 1 cut(s) 449
BsaJI CCNNGG 1 cut(s) 330
BsaWI WCCGGW 1 cut(s) 268
BsaXI ACNNNNNCTCC 2 cut(s) 302, 332
Bsc4I CCNNNNNNNGG 1 cut(s) 109
Bse1I ACTGG 1 cut(s) 61
Bse3DI GCAATG 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 330
BseGI GGATG 2 cut(s) 169, 265
BseLI CCNNNNNNNGG 1 cut(s) 109
BseMI GCAATG 1 cut(s) 187
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 1 cut(s) 61
BseXI GCAGC 2 cut(s) 300, 421
BsiSI CCGG 2 cut(s) 269, 330
BslI CCNNNNNNNGG 1 cut(s) 109
Bsp143I GATC 4 cut(s) 94, 154, 222, 253
BspACI CCGC 1 cut(s) 280
BspCNI CTCAG 1 cut(s) 430
BspMAI CTGCAG 2 cut(s) 395, 409
BspPI GGATC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 187
BsrI ACTGG 1 cut(s) 61
BssECI CCNNGG 1 cut(s) 330
BssMI GATC 4 cut(s) 94, 154, 222, 253
Bst4CI ACNGT 2 cut(s) 401, 470
Bst6I CTCTTC 1 cut(s) 78
BstBAI YACGTR 1 cut(s) 449
BstC8I GCNNGC 2 cut(s) 167, 294
BstDEI CTNAG 1 cut(s) 438
BstF5I GGATG 2 cut(s) 169, 265
BstKTI GATC 4 cut(s) 97, 157, 225, 256
BstMBI GATC 4 cut(s) 94, 154, 222, 253
BstMWI GCNNNNNNNGC 3 cut(s) 271, 298, 319
BstSCI CCNGG 1 cut(s) 329
BstSFI CTRYAG 2 cut(s) 391, 405
BstV1I GCAGC 2 cut(s) 300, 421
BstXI CCANNNNNNTGG 1 cut(s) 148
BtsCI GGATG 2 cut(s) 169, 265
BtsI GCAGTG 1 cut(s) 281
BtsIMutI CAGTG 1 cut(s) 281
Cac8I GCNNGC 2 cut(s) 167, 294
CaiI CAGNNNCTG 1 cut(s) 399
CseI GACGC 1 cut(s) 188
Csp6I GTAC 2 cut(s) 410, 446
CviAII CATG 1 cut(s) 431
CviQI GTAC 2 cut(s) 410, 446
DdeI CTNAG 1 cut(s) 438
DpnI GATC 4 cut(s) 96, 156, 224, 255
DpnII GATC 4 cut(s) 94, 154, 222, 253
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
EciI GGCGGA 1 cut(s) 295
Eco57I CTGAAG 1 cut(s) 59
FaeI CATG 1 cut(s) 434
FaiI YATR 9 cut(s) 10, 194, 196, 198, 200, 324, 357, 432, 464
FatI CATG 1 cut(s) 430
FbaI TGATCA 2 cut(s) 154, 222
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 314, 435
FokI GGATG 2 cut(s) 156, 272
Fsp4HI GCNGC 2 cut(s) 314, 435
FspBI CTAG 2 cut(s) 54, 242
GluI GCNGC 2 cut(s) 314, 435
HapII CCGG 2 cut(s) 269, 330
HgaI GACGC 1 cut(s) 188
Hin1II CATG 1 cut(s) 434
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HindIII AAGCTT 1 cut(s) 143
HinfI GANTC 2 cut(s) 5, 340
HpaII CCGG 2 cut(s) 269, 330
HphI GGTGA 2 cut(s) 113, 229
Hpy166II GTNNAC 3 cut(s) 211, 250, 427
Hpy188I TCNGA 1 cut(s) 345
Hpy188III TCNNGA 3 cut(s) 242, 251, 257
Hpy8I GTNNAC 3 cut(s) 211, 250, 427
Hpy99I CGWCG 2 cut(s) 182, 322
HpyAV CCTTC 1 cut(s) 426
HpyCH4III ACNGT 2 cut(s) 401, 470
HpyCH4IV ACGT 1 cut(s) 448
HpyCH4V TGCA 4 cut(s) 165, 192, 393, 407
HpyF10VI GCNNNNNNNGC 3 cut(s) 271, 298, 319
HpyF3I CTNAG 1 cut(s) 438
HpySE526I ACGT 1 cut(s) 448
Hsp92II CATG 1 cut(s) 434
Ksp22I TGATCA 2 cut(s) 154, 222
Kzo9I GATC 4 cut(s) 94, 154, 222, 253
LmnI GCTCC 2 cut(s) 271, 310
Lsp1109I GCAGC 2 cut(s) 300, 421
LweI GCATC 1 cut(s) 178
MaeI CTAG 2 cut(s) 54, 242
MaeII ACGT 1 cut(s) 448
MaeIII GTNAC 1 cut(s) 119
MalI GATC 4 cut(s) 96, 156, 224, 255
MboI GATC 4 cut(s) 94, 154, 222, 253
MboII GAAGA 1 cut(s) 65
MluCI AATT 2 cut(s) 104, 325
MnlI CCTC 6 cut(s) 37, 44, 81, 238, 276, 448
MseI TTAA 3 cut(s) 107, 348, 472
MslI CAYNNNNRTG 1 cut(s) 126
MspI CCGG 2 cut(s) 269, 330
MspR9I CCNGG 1 cut(s) 331
MwoI GCNNNNNNNGC 3 cut(s) 271, 298, 319
NciI CCSGG 1 cut(s) 331
NdeII GATC 4 cut(s) 94, 154, 222, 253
NlaIII CATG 1 cut(s) 434
NmuCI GTSAC 1 cut(s) 119
PfeI GAWTC 2 cut(s) 5, 340
PkrI GCNGC 2 cut(s) 315, 436
Ppu21I YACGTR 1 cut(s) 449
PstI CTGCAG 2 cut(s) 395, 409
PstNI CAGNNNCTG 1 cut(s) 399
RsaI GTAC 2 cut(s) 411, 447
RsaNI GTAC 2 cut(s) 410, 446
RseI CAYNNNNRTG 1 cut(s) 126
SaqAI TTAA 3 cut(s) 107, 348, 472
SatI GCNGC 2 cut(s) 314, 435
Sau3AI GATC 4 cut(s) 94, 154, 222, 253
ScrFI CCNGG 1 cut(s) 331
SetI ASST 9 cut(s) 147, 232, 249, 267, 287, 294, 315, 451, 459
SfaNI GCATC 1 cut(s) 178
SfcI CTRYAG 2 cut(s) 391, 405
SmiMI CAYNNNNRTG 1 cut(s) 126
Sse9I AATT 2 cut(s) 104, 325
SsiI CCGC 1 cut(s) 280
SspMI CTAG 2 cut(s) 54, 242
StyD4I CCNGG 1 cut(s) 329
TaaI ACNGT 2 cut(s) 401, 470
TaiI ACGT 1 cut(s) 451
TaqI TCGA 2 cut(s) 36, 42
TasI AATT 2 cut(s) 104, 325
TatI WGTACW 1 cut(s) 409
TfiI GAWTC 2 cut(s) 5, 340
Tru1I TTAA 3 cut(s) 107, 348, 472
Tru9I TTAA 3 cut(s) 107, 348, 472
TscAI CASTG 1 cut(s) 281
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 2 cut(s) 313, 434
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 2 cut(s) 144, 451
TspRI CASTG 1 cut(s) 281
XbaI TCTAGA 1 cut(s) 241
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 2 cut(s) 54, 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.