Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007372

Physical Location & Seq

Genomic Coordinates Forward (+)

37589140 .. 37593139

Gene Structure 4000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G025220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGGATATAAGTAATGAAGCCAGTGTTGATCCATTTCCTATTGGACCTTCAACCTTTGTTGGTCGGACCATTGCTTTCCGGGTTTTGTTCTGCAAGTCAATGTCGCATTTGAGACATCAAATCTTTCATATGTTGTTTATCCTCGTCTTTAGATTCAGGGACTTTTTGGCTCCTATGTTCTCATGGTTGCATCCTCGAAACCCGCAAGGGATATTGGCAATGGTGACAATCATTGCCTTTCTGTTGAAACGATACACAAATGTAAAAGTGAAGGCTGAAATGGCTTATCGGAGGAAATTTTGGAGAAATATGATGAGGACTGCATTGACATATGAGGAGTGGGCTCATGCTGCTAAAATGCTTGATAAAGAGACCCCTAAGATGAATGAATCAGACCTTTATGATGAAGAAGTGGTTAAGAACAAGCTTCAAGAACTCCACCACCGTCGTGAAGAGGGTTCTCTCCGAGATATAATATTCTGTATGCGAGCAGATCTTGTTAGAAATCTGGGTAACATGTGCAACCCTGAGCTTCACAAGGGGAGACTTCATGTGCCCAAACTTATAAAGGAATATATTGATGAGGTCTCAACTCAGTTGAGAATGGTTTGCGATTCAGACTCAGAAGAGCTCTCATTGGAAGAGAAGCTTGCTTTCATGCATGAAACAAGACACGCTTTTGGGAGAACTGCCTTGCTCTTGAGTGGGGGTGCTTCTCTTGGATCATTTCATGTCGGTGTAGTTAAAACGCTGGTGGAACATAAGCTTATGCCGAGAATAATTGCTGGTTCTAGTGTGGGGTCCATTATGTGTTCTGTTGTTGCCACTAGGTCTTGGCCAGAGCTGCAAAGTTTTTTTGAGGATTCTTGGCACTCGTTGCAGTTTTTTGATCAGATGGGTGGGATTTTTACAGTTGTGAAGAGGGTCATGACTCGTGGAGCTGTCCATGAGATCAGGCAGTTGCAAATGATGTTAAGGCATTTAACCAGTAATCTAACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGAATAACTGTTTGCTCCCCAAGGAAGCATGAGCCACCTAGATGCCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGTGCAGTGACAGCTTCTTGTGCTTTCCCAGGCCTTTTTGAGGCCCAGGAACTAATGGCGAAAGATAGAAGTGGTGAGATTGTTCCTTATCATCCTCCATTTAATTTGGATCCAGAGGCAGGGACAATGCCAGTGCGCAGGTGGCGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGCTAAAAGAATTGTTCAACGTTAATCATTTTATAGTCAGTCAGGCAAATCCTCATATTGCACCATTATTAAGACTAAAGGAATTTGTGAGAGCTTGTGGAGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTTGAGATGGAGGTTAAACATAGATGTAACCAGATCCTGGAACTTGGTTTTCCATTAGGTGGACTTGCAAAGCTGTTTGCTCAAGATTGGGAGGGTGATGTTACTGTTGTGATGCCTGCCACACTAGCTCAGTATTCGAAAATTATACAAAACCCAACATATGTTGAGCTTCAAAAGGCAGCTAACCAAGGTAGACGGTGCACTTGGGAGAAACTGTCAGCCATTAAAGCAAACTGTGGCATTGAGCTCGCCTTGATGAGTCTGTTGAGTGCTGAAAGAGCTGCTGCTTCTTCTCATGGCCTACCTAGCACGGTCAGGTTCAGTGCATCAAGAAGAATTCCATCTTGGAATTGCATTGCTCGTGAGAATTCTAGTGGTTCCCTTGAAGAAGACCTCCTTGGAGATGCTGGTTCCTCATTCCATCATGGAGTTGGTCCATCCACCAGTGGTAAAATCTTCCATACCCACCGTAACATACATGATGGTCATGGAAGTGACAGCGAATCTGAGAGTGCTGATTTAAATTCTTGGACAAGATCCGGTGGACCCTTGATGAGGACGACATCAGCAACTAAATTCATCGACTTTGTCCAAAACTTGGACGTTGATGCTGAACTGAATAGAGGTTTGTTGGTTAATCCCAACTCAGTTGCAACGCTTCAGTTGGGGGGCAGTAATCAATACTATCACAGCCCAAGGGGGACCACACCAGACCGTAGCCCTGACAGCACAAAATTTGATAAGAGGGATTTCGCGAGTGTGGCTTCAGTAAACGGTTCTAGCATTATGGTGACAGCAGGTGATCTTTTGCAGCCAGAAAGGATACATAATGGGATTGTGTTCAACGTTGTGAAGAAAGAAGACTTGTCATTGTCAAGTAGTAGGAGTCAGGATATGGAAAATTATAACAGTGAAGTTGCTGAGTGTGTGCAACTTGACTCTCTTGAAAAGGAGATGGATACTAGATCTGCATCTGAATATGGCGATGCTGATACTGCTTCAGAAATCGGATTAAATGATACAGCACCTTGCCAGTCCACAGATCAATCTAACATTGCTGATGATTCTAATAATCAGAGCTCTGCAGAGCGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004806 GO:0005575 GO:0005622 GO:0005623 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012511 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0019433 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044424 GO:0044464 GO:0046461 GO:0046464 GO:0046486 GO:0046503 GO:0052689 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00100 ko00561 ko00564 ko00565 ko00590 ko00591 ko00592 ko01100 ko01110 map00100 map00561 map00564 map00565 map00590 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

DUF3336 Patatin

Protein Analysis

841

Amino Acids

94.23

Weight (kDa)

6.42

Isoelectric Point (pI)

48.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3336	PF11815	94 - 225	3e-32	Domain of unknown function (DUF3336)
Patatin	PF01734	232 - 425	6.1e-19	Patatin-like phospholipase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04040 AT5G04040
fragaria_vesca	FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040 FvH4_6g25040
malus_domestica	MD12G1087400.v1.1 MD14G1083100.v1.1
prunus_persica	Prupe.7G047400_v2.0.a1
pyrus_communis	pycom12g07540 pycom14g07220
rosa_chinensis	RchiOBHm_Chr2g0124811
rosa_laevigata	RLG00000018823
rosa_multiflora	Rmu_sc0002939.1_g000008
rosa_roxburghii	Rroxscaffold_2G00119660
rosa_rugosa	Rorug02G0252600 Rorug02G0252700 Rorug02G0252800
rosa_samantha	Rh2AG312300 Rh2BG320500 Rh2CG300500 Rh2DG337700
rosa_wichuraiana	Rw2G025220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	566, 2334
AarI	CACCTGC	2 cut(s)	1245, 2216
Acc16I	TGCGCA	1 cut(s)	1253
Acc36I	ACCTGC	2 cut(s)	1245, 2216
AccB7I	CCANNNNNTGG	3 cut(s)	1465, 1487, 2026
AccI	GTMKAC	1 cut(s)	1621
AccII	CGCG	1 cut(s)	2183
AciI	CCGC	2 cut(s)	203, 1261
AclI	AACGTT	2 cut(s)	1317, 2274
AclWI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1959
AcoI	YGGCCR	1 cut(s)	836
AcsI	RAATTY	8 cut(s)	296, 1029, 1379, 1764, 1795, 1951, 2003, 2162
AcuI	CTGAAG	3 cut(s)	2072, 2178, 2412
AfiI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 1983, 2026
AflIII	ACRYGT	1 cut(s)	516
AgsI	TTSAA	9 cut(s)	51, 247, 431, 1004, 1315, 1601, 1814, 2272, 2375
AjnI	CCWGG	3 cut(s)	1144, 1161, 1464
AjuI	GAANNNNNNNTTGG	4 cut(s)	1756, 1788, 1809, 1841
AleI	CACNNNNGTG	1 cut(s)	447
Alw21I	GWGCWC	4 cut(s)	633, 1631, 1677, 2510
Alw26I	GTCTC	4 cut(s)	106, 365, 538, 592
Alw44I	GTGCAC	1 cut(s)	1627
AlwI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1959
AlwNI	CAGNNNCTG	1 cut(s)	1465
AoxI	GGCC	4 cut(s)	836, 1147, 1158, 1726
ApaLI	GTGCAC	1 cut(s)	1627
ApeKI	GCWGC	8 cut(s)	350, 844, 1297, 1409, 1607, 1709, 1712, 2239
ApoI	RAATTY	8 cut(s)	296, 1029, 1379, 1764, 1795, 1951, 2003, 2162
AspLEI	GCGC	2 cut(s)	1254, 2520
AspS9I	GGNCC	7 cut(s)	44, 66, 801, 1159, 1862, 1973, 2130
AsuC2I	CCSGG	1 cut(s)	80
AsuHPI	GGTGA	6 cut(s)	235, 1089, 1202, 1535, 2230, 2240
AsuII	TTCGAA	1 cut(s)	1565
AvaII	GGWCC	6 cut(s)	44, 66, 801, 1862, 1973, 2130
BaeGI	GKGCMC	2 cut(s)	558, 1631
BalI	TGGCCA	1 cut(s)	838
BamHI	GGATCC	1 cut(s)	1225
BanII	GRGCYC	4 cut(s)	346, 633, 1677, 2510
BauI	CACGAG	2 cut(s)	933, 1788
BbsI	GAAGAC	2 cut(s)	1824, 2295
Bbv12I	GWGCWC	4 cut(s)	633, 1631, 1677, 2510
BbvI	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1696, 1699, 2251
BccI	CCATC	8 cut(s)	889, 1259, 1429, 1777, 1857, 1873, 1904, 2377
BcgI	CGANNNNNNTGC	2 cut(s)	1657, 1691
BciT130I	CCWGG	3 cut(s)	1146, 1163, 1466
BciVI	GTATCC	2 cut(s)	2244, 2380
BclI	TGATCA	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	80
BcoDI	GTCTC	4 cut(s)	106, 365, 538, 592
BfaI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1734, 1800, 2208, 2391
BfmI	CTRYAG	1 cut(s)	2511
BfuAI	ACCTGC	2 cut(s)	1245, 2216
BfuI	GTATCC	2 cut(s)	2244, 2380
BglII	AGATCT	2 cut(s)	493, 2393
BisI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1710, 1713, 2240
BlsI	GCNGC	8 cut(s)	352, 846, 1299, 1411, 1609, 1711, 1714, 2241
Bme1390I	CCNGG	4 cut(s)	80, 1146, 1163, 1466
Bme18I	GGWCC	6 cut(s)	44, 66, 801, 1862, 1973, 2130
BmgT120I	GGNCC	7 cut(s)	44, 66, 801, 1159, 1862, 1973, 2130
BmiI	GGNNCC	7 cut(s)	171, 802, 1227, 1807, 1840, 1975, 2131
BmrFI	CCNGG	4 cut(s)	80, 1146, 1163, 1466
BmsI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1763, 1822, 2026, 2404, 2408
BpiI	GAAGAC	2 cut(s)	1824, 2295
Bpu10I	CCTNAGC	1 cut(s)	528
Bpu14I	TTCGAA	1 cut(s)	1565
BpuEI	CTTGAG	2 cut(s)	721, 1494
BpuMI	CCSGG	1 cut(s)	80
BsaBI	GATNNNNATC	1 cut(s)	2398
BsaI	GGTCTC	2 cut(s)	365, 592
BsaJI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1825, 2123
BsaWI	WCCGGW	1 cut(s)	1967
BsaXI	ACNNNNNCTCC	2 cut(s)	1628, 1658
Bsc4I	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 1983, 2026
Bse1I	ACTGG	5 cut(s)	21, 987, 1247, 1872, 2461
Bse3DI	GCAATG	5 cut(s)	69, 225, 231, 1782, 2481
Bse8I	GATNNNNATC	1 cut(s)	2398
BseBI	CCWGG	3 cut(s)	1146, 1163, 1466
BseDI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1825, 2123
BseGI	GGATG	4 cut(s)	190, 1207, 1270, 1865
BseJI	GATNNNNATC	1 cut(s)	2398
BseLI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 1983, 2026
BseMI	GCAATG	5 cut(s)	69, 225, 231, 1782, 2481
BseMII	CTCAG	7 cut(s)	519, 608, 636, 1571, 1926, 2088, 2340
BseNI	ACTGG	5 cut(s)	21, 987, 1247, 1872, 2461
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	2 cut(s)	558, 1631
BseXI	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1696, 1699, 2251
BsgI	GTGCAG	1 cut(s)	1140
Bsh1236I	CGCG	1 cut(s)	2183
BshFI	GGCC	4 cut(s)	838, 1149, 1160, 1728
BsiHKAI	GWGCWC	4 cut(s)	633, 1631, 1677, 2510
BsiSI	CCGG	2 cut(s)	79, 1968
BslFI	GGGAC	3 cut(s)	173, 1252, 2143
BslI	CCNNNNNNNGG	6 cut(s)	1156, 1235, 1465, 1487, 1983, 2026
BsmAI	GTCTC	4 cut(s)	106, 365, 538, 592
BsmFI	GGGAC	3 cut(s)	173, 1252, 2143
BsnI	GGCC	4 cut(s)	838, 1149, 1160, 1728
Bso31I	GGTCTC	2 cut(s)	365, 592
Bsp119I	TTCGAA	1 cut(s)	1565
Bsp1286I	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1677, 2510
Bsp68I	TCGCGA	1 cut(s)	2183
BspACI	CCGC	2 cut(s)	203, 1261
BspANI	GGCC	4 cut(s)	838, 1149, 1160, 1728
BspCNI	CTCAG	7 cut(s)	520, 607, 635, 1570, 1927, 2087, 2341
BspFNI	CGCG	1 cut(s)	2183
BspHI	TCATGA	1 cut(s)	927
BspLI	GGNNCC	7 cut(s)	171, 802, 1227, 1807, 1840, 1975, 2131
BspMAI	CTGCAG	1 cut(s)	2515
BspMI	ACCTGC	2 cut(s)	1245, 2216
BspPI	GGATC	6 cut(s)	23, 730, 1220, 1233, 1456, 1959
BspQI	GCTCTTC	1 cut(s)	621
BspT104I	TTCGAA	1 cut(s)	1565
BspTNI	GGTCTC	2 cut(s)	365, 592
BsrDI	GCAATG	5 cut(s)	69, 225, 231, 1782, 2481
BsrI	ACTGG	5 cut(s)	21, 987, 1247, 1872, 2461
BssECI	CCNNGG	6 cut(s)	1055, 1144, 1161, 1615, 1825, 2123
BssSI	CACGAG	2 cut(s)	933, 1788
BssT1I	CCWWGG	4 cut(s)	1055, 1615, 1825, 2123
Bst2BI	CACGAG	2 cut(s)	933, 1788
Bst2UI	CCWGG	3 cut(s)	1146, 1163, 1466
Bst6I	CTCTTC	4 cut(s)	447, 621, 636, 914
BstAPI	GCANNNNNTGC	1 cut(s)	877
BstBI	TTCGAA	1 cut(s)	1565
BstC8I	GCNNGC	5 cut(s)	489, 651, 1419, 1545, 1677
BstDEI	CTNAG	8 cut(s)	378, 528, 594, 622, 1557, 1935, 2074, 2349
BstENI	CCTNNNNNAGG	2 cut(s)	1154, 1981
BstF5I	GGATG	4 cut(s)	190, 1207, 1270, 1865
BstFNI	CGCG	1 cut(s)	2183
BstHHI	GCGC	2 cut(s)	1254, 2520
BstMAI	GTCTC	4 cut(s)	106, 365, 538, 592
BstNI	CCWGG	3 cut(s)	1146, 1163, 1466
BstNSI	RCATGY	1 cut(s)	520
BstSCI	CCNGG	4 cut(s)	78, 1144, 1161, 1464
BstSFI	CTRYAG	1 cut(s)	2511
BstSLI	GKGCMC	2 cut(s)	558, 1631
BstUI	CGCG	1 cut(s)	2183
BstV1I	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1696, 1699, 2251
BstV2I	GAAGAC	2 cut(s)	1824, 2295
BstX2I	RGATCY	5 cut(s)	493, 1225, 1461, 1964, 2393
BstYI	RGATCY	5 cut(s)	493, 1225, 1461, 1964, 2393
BsuI	GTATCC	2 cut(s)	2244, 2380
BsuRI	GGCC	4 cut(s)	838, 1149, 1160, 1728
BtgZI	GCGATG	1 cut(s)	2427
BtsCI	GGATG	4 cut(s)	190, 1207, 1270, 1865
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	6 cut(s)	28, 1128, 1254, 1756, 1879, 2344
BtuMI	TCGCGA	1 cut(s)	2183
BveI	ACCTGC	2 cut(s)	1245, 2216
Cac8I	GCNNGC	5 cut(s)	489, 651, 1419, 1545, 1677
CaiI	CAGNNNCTG	1 cut(s)	1465
CciI	TCATGA	1 cut(s)	927
CfoI	GCGC	2 cut(s)	1254, 2520
Cfr13I	GGNCC	7 cut(s)	44, 66, 801, 1159, 1862, 1973, 2130
DdeI	CTNAG	8 cut(s)	378, 528, 594, 622, 1557, 1935, 2074, 2349
DraI	TTTAAA	1 cut(s)	1950
EaeI	YGGCCR	1 cut(s)	836
Eam1104I	CTCTTC	4 cut(s)	447, 621, 636, 914
EarI	CTCTTC	4 cut(s)	447, 621, 636, 914
Ecl136II	GAGCTC	3 cut(s)	631, 1675, 2508
Eco130I	CCWWGG	4 cut(s)	1055, 1615, 1825, 2123
Eco147I	AGGCCT	1 cut(s)	1149
Eco24I	GRGCYC	4 cut(s)	346, 633, 1677, 2510
Eco31I	GGTCTC	2 cut(s)	365, 592
Eco47I	GGWCC	6 cut(s)	44, 66, 801, 1862, 1973, 2130
Eco53kI	GAGCTC	3 cut(s)	631, 1675, 2508
Eco57I	CTGAAG	3 cut(s)	2072, 2178, 2412
EcoICRI	GAGCTC	3 cut(s)	631, 1675, 2508
EcoNI	CCTNNNNNAGG	2 cut(s)	1154, 1981
EcoRI	GAATTC	3 cut(s)	1029, 1764, 1795
EcoRII	CCWGG	3 cut(s)	1144, 1161, 1464
EcoT14I	CCWWGG	4 cut(s)	1055, 1615, 1825, 2123
EcoT22I	ATGCAT	1 cut(s)	663
EcoT38I	GRGCYC	4 cut(s)	346, 633, 1677, 2510
ErhI	CCWWGG	4 cut(s)	1055, 1615, 1825, 2123
FalI	AAGNNNNNCTT	6 cut(s)	633, 665, 661, 693, 1809, 1841
FaqI	GGGAC	3 cut(s)	173, 1252, 2143
FauI	CCCGC	2 cut(s)	210, 1254
FauNDI	CATATG	3 cut(s)	129, 331, 1588
FbaI	TGATCA	1 cut(s)	889
FblI	GTMKAC	1 cut(s)	1621
Fnu4HI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1710, 1713, 2240
FokI	GGATG	4 cut(s)	177, 1194, 1277, 1852
FriOI	GRGCYC	4 cut(s)	346, 633, 1677, 2510
Fsp4HI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1710, 1713, 2240
FspBI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1734, 1800, 2208, 2391
FspI	TGCGCA	1 cut(s)	1253
GlaI	GCGC	2 cut(s)	1253, 2519
GluI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1710, 1713, 2240
HaeIII	GGCC	4 cut(s)	838, 1149, 1160, 1728
HapII	CCGG	2 cut(s)	79, 1968
HhaI	GCGC	2 cut(s)	1254, 2520
Hin6I	GCGC	2 cut(s)	1252, 2518
HinP1I	GCGC	2 cut(s)	1252, 2518
HindIII	AAGCTT	5 cut(s)	425, 647, 764, 1008, 1415
HpaII	CCGG	2 cut(s)	79, 1968
HphI	GGTGA	6 cut(s)	235, 1089, 1202, 1535, 2230, 2240
Hpy166II	GTNNAC	6 cut(s)	1490, 1622, 1629, 1973, 2200, 2466
Hpy8I	GTNNAC	6 cut(s)	1490, 1622, 1629, 1973, 2200, 2466
Hpy99I	CGWCG	1 cut(s)	450
HpyAV	CCTTC	2 cut(s)	57, 265
HpyCH4IV	ACGT	3 cut(s)	1317, 2031, 2274
HpyF3I	CTNAG	8 cut(s)	378, 528, 594, 622, 1557, 1935, 2074, 2349
HpySE526I	ACGT	3 cut(s)	1317, 2031, 2274
HspAI	GCGC	2 cut(s)	1252, 2518
Ksp22I	TGATCA	1 cut(s)	889
LguI	GCTCTTC	1 cut(s)	621
LmnI	GCTCC	3 cut(s)	175, 938, 1055
Lsp1109I	GCAGC	8 cut(s)	337, 831, 1309, 1396, 1619, 1696, 1699, 2251
LweI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1763, 1822, 2026, 2404, 2408
MaeI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1734, 1800, 2208, 2391
MaeII	ACGT	3 cut(s)	1317, 2031, 2274
MaeIII	GTNAC	8 cut(s)	223, 512, 1123, 1454, 1528, 1898, 1922, 2218
MflI	RGATCY	5 cut(s)	493, 1225, 1461, 1964, 2393
MhlI	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1677, 2510
MlsI	TGGCCA	1 cut(s)	838
MluNI	TGGCCA	1 cut(s)	838
MlyI	GAGTC	5 cut(s)	614, 925, 1696, 2323, 2360
MmeI	TCCRAC	1 cut(s)	44
Mox20I	TGGCCA	1 cut(s)	838
Mph1103I	ATGCAT	1 cut(s)	663
MscI	TGGCCA	1 cut(s)	838
MslI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1920, 2216
Msp20I	TGGCCA	1 cut(s)	838
MspI	CCGG	2 cut(s)	79, 1968
MspR9I	CCNGG	4 cut(s)	80, 1146, 1163, 1466
MvaI	CCWGG	3 cut(s)	1146, 1163, 1466
MvnI	CGCG	1 cut(s)	2183
NciI	CCSGG	1 cut(s)	80
NdeI	CATATG	3 cut(s)	129, 331, 1588
NlaIV	GGNNCC	7 cut(s)	171, 802, 1227, 1807, 1840, 1975, 2131
NmeAIII	GCCGAG	1 cut(s)	798
NmuCI	GTSAC	4 cut(s)	223, 1123, 1922, 2218
NruI	TCGCGA	1 cut(s)	2183
NsbI	TGCGCA	1 cut(s)	1253
NsiI	ATGCAT	1 cut(s)	663
NspI	RCATGY	1 cut(s)	520
NspV	TTCGAA	1 cut(s)	1565
OliI	CACNNNNGTG	1 cut(s)	447
PagI	TCATGA	1 cut(s)	927
PaqCI	CACCTGC	2 cut(s)	1245, 2216
PceI	AGGCCT	1 cut(s)	1149
PciI	ACATGT	1 cut(s)	516
PciSI	GCTCTTC	1 cut(s)	621
PfeI	GAWTC	6 cut(s)	153, 389, 614, 863, 1931, 2492
PflFI	GACNNNGTC	1 cut(s)	2015
PflMI	CCANNNNNTGG	3 cut(s)	1465, 1487, 2026
PfoI	TCCNGGA	1 cut(s)	1464
PkrI	GCNGC	8 cut(s)	352, 846, 1299, 1411, 1609, 1711, 1714, 2241
PleI	GAGTC	5 cut(s)	614, 925, 1695, 2322, 2360
PpsI	GAGTC	5 cut(s)	614, 925, 1695, 2322, 2360
PscI	ACATGT	1 cut(s)	516
PsiI	TTATAA	2 cut(s)	566, 2334
Psp124BI	GAGCTC	3 cut(s)	633, 1677, 2510
Psp1406I	AACGTT	2 cut(s)	1317, 2274
Psp6I	CCWGG	3 cut(s)	1144, 1161, 1464
PspGI	CCWGG	3 cut(s)	1144, 1161, 1464
PspN4I	GGNNCC	7 cut(s)	171, 802, 1227, 1807, 1840, 1975, 2131
PspPI	GGNCC	7 cut(s)	44, 66, 801, 1159, 1862, 1973, 2130
PstI	CTGCAG	1 cut(s)	2515
PstNI	CAGNNNCTG	1 cut(s)	1465
PsuI	RGATCY	5 cut(s)	493, 1225, 1461, 1964, 2393
PsyI	GACNNNGTC	1 cut(s)	2015
RruI	TCGCGA	1 cut(s)	2183
RseI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1920, 2216
SacI	GAGCTC	3 cut(s)	633, 1677, 2510
SapI	GCTCTTC	1 cut(s)	621
SatI	GCNGC	8 cut(s)	351, 845, 1298, 1410, 1608, 1710, 1713, 2240
Sau96I	GGNCC	7 cut(s)	44, 66, 801, 1159, 1862, 1973, 2130
SchI	GAGTC	5 cut(s)	614, 925, 1696, 2323, 2360
ScrFI	CCNGG	4 cut(s)	80, 1146, 1163, 1466
SduI	GDGCHC	6 cut(s)	346, 558, 633, 1631, 1677, 2510
SfaNI	GCATC	9 cut(s)	199, 1067, 1284, 1530, 1763, 1822, 2026, 2404, 2408
SfcI	CTRYAG	1 cut(s)	2511
SfuI	TTCGAA	1 cut(s)	1565
SinI	GGWCC	6 cut(s)	44, 66, 801, 1862, 1973, 2130
SmiI	ATTTAAAT	1 cut(s)	1950
SmiMI	CAYNNNNRTG	5 cut(s)	447, 735, 1075, 1920, 2216
SmlI	CTYRAG	2 cut(s)	700, 1509
SmoI	CTYRAG	2 cut(s)	700, 1509
SseBI	AGGCCT	1 cut(s)	1149
SsiI	CCGC	2 cut(s)	203, 1261
SspI	AATATT	1 cut(s)	477
SspMI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1734, 1800, 2208, 2391
SstI	GAGCTC	3 cut(s)	633, 1677, 2510
StuI	AGGCCT	1 cut(s)	1149
StyD4I	CCNGG	4 cut(s)	78, 1144, 1161, 1464
StyI	CCWWGG	4 cut(s)	1055, 1615, 1825, 2123
SwaI	ATTTAAAT	1 cut(s)	1950
TaiI	ACGT	3 cut(s)	1320, 2034, 2277
TaqI	TCGA	4 cut(s)	196, 1027, 1565, 2010
TfiI	GAWTC	6 cut(s)	153, 389, 614, 863, 1931, 2492
TscAI	CASTG	6 cut(s)	28, 1128, 1254, 1756, 1879, 2344
TseFI	GTSAC	4 cut(s)	223, 1123, 1922, 2218
TseI	GCWGC	8 cut(s)	350, 844, 1297, 1409, 1607, 1709, 1712, 2239
Tsp45I	GTSAC	4 cut(s)	223, 1123, 1922, 2218
TspRI	CASTG	6 cut(s)	28, 1128, 1254, 1756, 1879, 2344
Tth111I	GACNNNGTC	1 cut(s)	2015
Van91I	CCANNNNNTGG	3 cut(s)	1465, 1487, 2026
VneI	GTGCAC	1 cut(s)	1627
VpaK11BI	GGWCC	6 cut(s)	44, 66, 801, 1862, 1973, 2130
XagI	CCTNNNNNAGG	2 cut(s)	1154, 1981
XapI	RAATTY	8 cut(s)	296, 1029, 1379, 1764, 1795, 1951, 2003, 2162
XceI	RCATGY	1 cut(s)	520
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1254, 1856
XmiI	GTMKAC	1 cut(s)	1621
XspI	CTAG	8 cut(s)	792, 828, 1074, 1553, 1734, 1800, 2208, 2391
Zsp2I	ATGCAT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.