Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012252

Physical Location & Seq

Genomic Coordinates Forward (+)

18975772 .. 18978186

Gene Structure 2415 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g25070.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGATGGCTTGGTACTGGAATTGGGCAAACTATTTCTAGTTGCAGGATTAAAATATCAAATATTAGACAAGACTGCTGCTTTATTTGTAGCAAATAACCAAGGAAGGGTTTTGGATGACATGCTCATATTGGGATCGGCTTCGATGCTCTTAAACCTCAGAAGAAGATTTCACCCAAACCGCTCACTCTGCAACCTCCTCTCAACTAGCACACTTCCCTCCGACTCTACACCACAGGAGCCTCTTTCAGACTCCCAACTCAAATCCTTAGTCCTCAGCCACTACACTCCTCGCGGCAAATTCACCAACCTGCTCCAAAACGTCGTCGCTTTGCCCGCCGTTCTCCTCACCGCCTGCCAAAACCTCACCGCCACAACCCCTCAACCCCTTCACAATGGCCTTCTCCACTCCGTCTCCAAGCGCTTCTCTCTTCACGAAATGGGTCGCCAGCTCCGCGAGAATCGCTTCGATGTGGGAGCTTCTAGCGTCTCAATGGGCGACGGAGGTGAGTCTTTGTTGGTCTTACCCACTTTGAAACTCAAAGTTTTGATTGAAGCTATTAGGATTGTACTGGGCGTTGTTTATGATGAACGCTTTGTCACGTTTTCTTATGGCGGTCGTGTTAATCTGGGGCGGCACACGGCCATTAGGTACCTTAAGAACTCTGTTGAAAATCCCACCTGGTGGTTTAGTGTTGGCTTTAGTCGGGGAGTGTTCGAAAAACGACATGTGAGTAAGCTATGCTTGTTTATGGAAGAGAAGATAGAGGATGAGGTTTTGATTGGTATCATTAAGACATTGTTTGAATGTGGCGTTGTGAGAATTGAATTGGGTAGTTTTTGCTTTGGAAGAGGGTTTCCTCAGGAGAGTGGGTTGAGTTCAGTTTTGATGAACATTTACTTTAATGGTTTCGATAAAGAGATTCAGGAGATGCGTCTGAGGAAGAATCAGGAGCATCCCAAGTTCGAGTCGGATGAGCTTGTTTCCAAGGATGGTGTTTTCTACAAGCCTGTGAAGATATATGCGGTTAGGTACTTGGATGAGATATTAGTGATGACGTCCGGGTCTAAAATGTTGACTATGGATTTGAAGAACTGGGTTGTCAACTACTTGGAAGGGAGTTTGGAATTGATGGTGGATAAGGTAAAGACATCTATTCACAGTGCAGTGTCTGAGAAGATTGATTTCATGGGCATGGAATTACGGGCAGTTCCACCTTCGGTGTCGCACCCCCCTATGTCTGAAAAAGCTATTAGAGCACGGAAAAAGTACCTTAGACAGAAGGAAGTCAGAGCTATAGAATTGAAAAATGCTAGGGAGAGGAATAGAAAGAAATTGGGAATGAAAATTATGGGCCATGTTTTTAAAAAGCTGAAGACTGGTGATAGATTGAAATCTGAGTATCAAATTGAGAATGAAGTCAGAGAAATATTCAGCACCTGGGCTGATGAAGTAGTGAAAGAGTTCCTTGGGTCCTTGGATGAGCGTTGGGAATGGTATCGAAAGTTATCAGCAGGTACTTTTCTGTCTCTAAGGCACATTAGAAAACAATTGTCTGAAGAGCTTGTAGATTCTTATGATAAGTTCCAAGAGCAAGTAGACAAGCATCTGAACCCAGTCAGAGATAGAAAGGCAAGGGAGGAAGAAGAAAGGAGGGTAACAGAAGAAGCAGAGCAGAAATATGCTAAGAGAACAGTTGAGGATTTGACAAAGGTCTGTATCAAAGCTGATGCGCCTATAGAAGTTTTGAGGAAGATGGTTAAGTTGATTGGGTTTACAAATTCTATGGGTCGTCCCAGGCCGATCACGTTACTAACTGCTCTTGAAGATGCTGACATCATCAAGTGGTATGCTGGTGTAGGGAGAAGATGGCTTGATTTTTACTGCTGCTGCCATAACTTTAAGATGGTGAAAACTATTGTAACTTATCATTTGAGGTTCTCTTGTATCCTGACTCTAGCTGAAAAGCATGAATCCACCAAACGTGAAGCCATGCAACATTATACTAAGGATTTAAAAGTCTTTGATATAAATGGAAATGAAGAAGTATTCTTTCCCACCGAAAGAGAGGTAAAGATGATGGGAGATAAAAATCTTTCTGATCCAAAACCTGTGGATGGGGCATTTTCTTTGGCTTTGATTAGATTAGCTTCTGATGAGCCTCCATATTCTTGTGTTGCTCATTTCTGTGACAGAACAGATACTATTGTTTATCGGGTACGATTATTGCAAAGTCGATTGAATGTAACCCCCTTGGATGAAAATAAATGGGTGCCGGGGATGGGCGCAATCAATGGGAGTCTCCATCTGAAATGTTTCCCTCTTTGTCCTGATCACATACATGATTTATACATGGGAAGAATCACGTTTCAAGATATTGATAGTACTTCCTTTGTGTTTGTGGATGTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003674 GO:0003824 GO:0003964 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006278 GO:0006310 GO:0006314 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090615 GO:0140053 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

805

Amino Acids

92.21

Weight (kDa)

8.84

Isoelectric Point (pI)

41.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Intron_maturas2	PF01348	577 - 691	8.4e-16	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04050 AT5G04050
fragaria_vesca	FvH4_6g25070
malus_domestica	MD12G1089700.v1.1
prunus_persica	Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1
pyrus_communis	pycom12g07560
rosa_chinensis	RchiOBHm_Chr2g0124831
rosa_laevigata	RLG00000018826
rosa_multiflora	Rmu_co8339159.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119620
rosa_rugosa	Rorug02G0253000
rosa_samantha	Rh2AG068200 Rh2AG312500 Rh2BG320700 Rh2CG300700 Rh2DG338000
rosa_wichuraiana	Rw2G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1063
AatII	GACGTC	1 cut(s)	1061
Acc36I	ACCTGC	2 cut(s)	318, 1505
Acc65I	GGTACC	1 cut(s)	651
AccB1I	GGYRCC	2 cut(s)	651, 2272
AccB7I	CCANNNNNTGG	1 cut(s)	684
AccBSI	CCGCTC	1 cut(s)	183
AccI	GTMKAC	2 cut(s)	1599, 2409
AccII	CGCG	2 cut(s)	294, 456
AciI	CCGC	9 cut(s)	181, 294, 336, 351, 369, 454, 615, 634, 1025
AclWI	GGATC	2 cut(s)	142, 2096
AcoI	YGGCCR	1 cut(s)	642
AcsI	RAATTY	2 cut(s)	299, 1780
AcuI	CTGAAG	2 cut(s)	1394, 1578
AcyI	GRCGYC	1 cut(s)	1058
AdeI	CACNNNGTG	1 cut(s)	684
AfaI	GTAC	8 cut(s)	15, 570, 653, 1034, 1271, 1519, 2220, 2386
AfeI	AGCGCT	1 cut(s)	422
AfiI	CCNNNNNNNGG	4 cut(s)	106, 684, 2117, 2282
AflII	CTTAAG	1 cut(s)	656
AflIII	ACRYGT	1 cut(s)	727
AjnI	CCWGG	3 cut(s)	680, 1439, 1796
Alw21I	GWGCWC	1 cut(s)	1261
Alw26I	GTCTC	4 cut(s)	418, 493, 1533, 2306
AlwI	GGATC	2 cut(s)	142, 2096
AlwNI	CAGNNNCTG	2 cut(s)	1172, 1440
Aor51HI	AGCGCT	1 cut(s)	422
AoxI	GGCC	4 cut(s)	397, 642, 1354, 1799
ApeKI	GCWGC	3 cut(s)	77, 1887, 1890
ApoI	RAATTY	2 cut(s)	299, 1780
ArsI	GACNNNNNNTTYG	4 cut(s)	255, 287, 1069, 1101
Asp700I	GAANNNNTTC	3 cut(s)	464, 1463, 2315
Asp718I	GGTACC	1 cut(s)	651
AspLEI	GCGC	3 cut(s)	423, 1735, 2288
AspS9I	GGNCC	2 cut(s)	1354, 1473
AsuC2I	CCSGG	2 cut(s)	1063, 2277
AsuHPI	GGTGA	7 cut(s)	164, 295, 340, 358, 518, 1394, 1921
AsuII	TTCGAA	1 cut(s)	717
AvaII	GGWCC	1 cut(s)	1473
AxyI	CCTNAGG	1 cut(s)	861
BaeI	ACNNNNGTAYC	2 cut(s)	2193, 2226
BanI	GGYRCC	2 cut(s)	651, 2272
BbsI	GAAGAC	1 cut(s)	1382
Bbv12I	GWGCWC	1 cut(s)	1261
BbvCI	CCTCAGC	1 cut(s)	275
BbvI	GCAGC	3 cut(s)	64, 1874, 1877
BccI	CCATC	9 cut(s)	986, 1126, 1750, 1863, 1900, 2074, 2111, 2275, 2313
BceAI	ACGGC	2 cut(s)	323, 657
BciT130I	CCWGG	3 cut(s)	682, 1441, 1798
BciVI	GTATCC	1 cut(s)	1958
BclI	TGATCA	1 cut(s)	2332
BcnI	CCSGG	2 cut(s)	1063, 2277
BcoDI	GTCTC	4 cut(s)	418, 493, 1533, 2306
BfaI	CTAG	5 cut(s)	38, 207, 483, 1314, 1958
BfmI	CTRYAG	2 cut(s)	1296, 1737
BfoI	RGCGCY	1 cut(s)	424
BfrI	CTTAAG	1 cut(s)	656
BfuAI	ACCTGC	2 cut(s)	318, 1505
BfuI	GTATCC	1 cut(s)	1958
BisI	GCNGC	5 cut(s)	78, 295, 635, 1888, 1891
BlsI	GCNGC	5 cut(s)	79, 296, 636, 1889, 1892
BmcAI	AGTACT	1 cut(s)	2386
Bme1390I	CCNGG	5 cut(s)	682, 1063, 1441, 1798, 2277
Bme18I	GGWCC	1 cut(s)	1473
BmgT120I	GGNCC	2 cut(s)	1354, 1473
BmiI	GGNNCC	4 cut(s)	240, 653, 1474, 2274
BmrFI	CCNGG	5 cut(s)	682, 1063, 1441, 1798, 2277
BmrI	ACTGGG	3 cut(s)	581, 1105, 1610
BmsI	GCATC	6 cut(s)	135, 921, 964, 1615, 1720, 1819
BmuI	ACTGGG	3 cut(s)	581, 1105, 1610
BoxI	GACNNNNGTC	1 cut(s)	1712
BpiI	GAAGAC	1 cut(s)	1382
Bpu10I	CCTNAGC	1 cut(s)	275
Bpu14I	TTCGAA	1 cut(s)	717
BpuMI	CCSGG	2 cut(s)	1063, 2277
BsaBI	GATNNNNATC	3 cut(s)	785, 1393, 2091
BsaHI	GRCGYC	1 cut(s)	1058
BsaJI	CCNNGG	8 cut(s)	100, 987, 1440, 1468, 1476, 1796, 2253, 2276
BsaXI	ACNNNNNCTCC	4 cut(s)	398, 428, 857, 887
Bsc4I	CCNNNNNNNGG	4 cut(s)	106, 684, 2117, 2282
Bse1I	ACTGG	5 cut(s)	21, 576, 1100, 1384, 1616
Bse21I	CCTNAGG	1 cut(s)	861
Bse8I	GATNNNNATC	3 cut(s)	785, 1393, 2091
BseBI	CCWGG	3 cut(s)	682, 1441, 1798
BseDI	CCNNGG	8 cut(s)	100, 987, 1440, 1468, 1476, 1796, 2253, 2276
BseJI	GATNNNNATC	3 cut(s)	785, 1393, 2091
BseLI	CCNNNNNNNGG	4 cut(s)	106, 684, 2117, 2282
BseMII	CTCAG	6 cut(s)	172, 289, 875, 929, 1164, 1389
BseNI	ACTGG	5 cut(s)	21, 576, 1100, 1384, 1616
BseRI	GAGGAG	3 cut(s)	188, 279, 335
BseXI	GCAGC	3 cut(s)	64, 1874, 1877
BsgI	GTGCAG	1 cut(s)	1185
Bsh1236I	CGCG	2 cut(s)	294, 456
Bsh1285I	CGRYCG	1 cut(s)	619
BshFI	GGCC	4 cut(s)	399, 644, 1356, 1801
BshNI	GGYRCC	2 cut(s)	651, 2272
BsiEI	CGRYCG	1 cut(s)	619
BsiHKAI	GWGCWC	1 cut(s)	1261
BsiSI	CCGG	2 cut(s)	1062, 2276
BslFI	GGGAC	1 cut(s)	1779
BslI	CCNNNNNNNGG	4 cut(s)	106, 684, 2117, 2282
BsmAI	GTCTC	4 cut(s)	418, 493, 1533, 2306
BsmBI	CGTCTC	2 cut(s)	418, 493
BsmFI	GGGAC	1 cut(s)	1779
BsnI	GGCC	4 cut(s)	399, 644, 1356, 1801
Bsp119I	TTCGAA	1 cut(s)	717
Bsp1286I	GDGCHC	1 cut(s)	1261
Bsp143I	GATC	4 cut(s)	134, 1803, 2101, 2332
BspACI	CCGC	9 cut(s)	181, 294, 336, 351, 369, 454, 615, 634, 1025
BspANI	GGCC	4 cut(s)	399, 644, 1356, 1801
BspCNI	CTCAG	6 cut(s)	171, 288, 874, 930, 1165, 1390
BspFNI	CGCG	2 cut(s)	294, 456
BspLI	GGNNCC	4 cut(s)	240, 653, 1474, 2274
BspMI	ACCTGC	2 cut(s)	318, 1505
BspPI	GGATC	2 cut(s)	142, 2096
BspQI	GCTCTTC	1 cut(s)	1554
BspT104I	TTCGAA	1 cut(s)	717
BspT107I	GGYRCC	2 cut(s)	651, 2272
BspTI	CTTAAG	1 cut(s)	656
BsrBI	CCGCTC	1 cut(s)	183
BsrI	ACTGG	5 cut(s)	21, 576, 1100, 1384, 1616
BssECI	CCNNGG	8 cut(s)	100, 987, 1440, 1468, 1476, 1796, 2253, 2276
BssMI	GATC	4 cut(s)	134, 1803, 2101, 2332
BssNI	GRCGYC	1 cut(s)	1058
BssT1I	CCWWGG	5 cut(s)	100, 987, 1468, 1476, 2253
Bst2UI	CCWGG	3 cut(s)	682, 1441, 1798
Bst4CI	ACNGT	2 cut(s)	1163, 1696
Bst6I	CTCTTC	4 cut(s)	435, 750, 844, 1554
BstACI	GRCGYC	1 cut(s)	1058
BstAFI	CTTAAG	1 cut(s)	656
BstBI	TTCGAA	1 cut(s)	717
BstC8I	GCNNGC	3 cut(s)	336, 355, 449
BstFNI	CGCG	2 cut(s)	294, 456
BstH2I	RGCGCY	1 cut(s)	424
BstHHI	GCGC	3 cut(s)	423, 1735, 2288
BstKTI	GATC	4 cut(s)	137, 1806, 2104, 2335
BstMAI	GTCTC	4 cut(s)	418, 493, 1533, 2306
BstMBI	GATC	4 cut(s)	134, 1803, 2101, 2332
BstMCI	CGRYCG	1 cut(s)	619
BstMWI	GCNNNNNNNGC	5 cut(s)	189, 335, 453, 462, 1256
BstNI	CCWGG	3 cut(s)	682, 1441, 1798
BstNSI	RCATGY	2 cut(s)	124, 731
BstPAI	GACNNNNGTC	1 cut(s)	1712
BstSCI	CCNGG	5 cut(s)	680, 1061, 1439, 1796, 2275
BstSFI	CTRYAG	2 cut(s)	1296, 1737
BstUI	CGCG	2 cut(s)	294, 456
BstV1I	GCAGC	3 cut(s)	64, 1874, 1877
BstV2I	GAAGAC	1 cut(s)	1382
Bsu36I	CCTNAGG	1 cut(s)	861
BsuI	GTATCC	1 cut(s)	1958
BsuRI	GGCC	4 cut(s)	399, 644, 1356, 1801
BtsI	GCAGTG	1 cut(s)	1173
BtsIMutI	CAGTG	2 cut(s)	1168, 1173
BveI	ACCTGC	2 cut(s)	318, 1505
Cac8I	GCNNGC	3 cut(s)	336, 355, 449
CaiI	CAGNNNCTG	2 cut(s)	1172, 1440
CfoI	GCGC	3 cut(s)	423, 1735, 2288
Cfr13I	GGNCC	2 cut(s)	1354, 1473
CseI	GACGC	2 cut(s)	475, 923
CsiI	ACCWGGT	1 cut(s)	680
Csp6I	GTAC	8 cut(s)	14, 569, 652, 1033, 1270, 1518, 2219, 2385
CspCI	CAANNNNNGTGG	2 cut(s)	2094, 2129
CviAII	CATG	9 cut(s)	121, 728, 1189, 1195, 1358, 1970, 1993, 2342, 2353
CviQI	GTAC	8 cut(s)	14, 569, 652, 1033, 1270, 1518, 2219, 2385
DpnI	GATC	4 cut(s)	136, 1805, 2103, 2334
DpnII	GATC	4 cut(s)	134, 1803, 2101, 2332
DraI	TTTAAA	2 cut(s)	1366, 2016
DraIII	CACNNNGTG	1 cut(s)	684
DrdI	GACNNNNNNGTC	1 cut(s)	1063
DseDI	GACNNNNNNGTC	1 cut(s)	1063
EaeI	YGGCCR	1 cut(s)	642
Eam1104I	CTCTTC	4 cut(s)	435, 750, 844, 1554
EarI	CTCTTC	4 cut(s)	435, 750, 844, 1554
Eco130I	CCWWGG	5 cut(s)	100, 987, 1468, 1476, 2253
Eco47I	GGWCC	1 cut(s)	1473
Eco47III	AGCGCT	1 cut(s)	422
Eco57I	CTGAAG	2 cut(s)	1394, 1578
Eco81I	CCTNAGG	1 cut(s)	861
EcoO109I	RGGNCCY	1 cut(s)	1473
EcoRII	CCWGG	3 cut(s)	680, 1439, 1796
EcoT14I	CCWWGG	5 cut(s)	100, 987, 1468, 1476, 2253
ErhI	CCWWGG	5 cut(s)	100, 987, 1468, 1476, 2253
Esp3I	CGTCTC	2 cut(s)	418, 493
FaeI	CATG	9 cut(s)	124, 731, 1192, 1198, 1361, 1973, 1996, 2345, 2356
FalI	AAGNNNNNCTT	4 cut(s)	728, 760, 1452, 1484
FaqI	GGGAC	1 cut(s)	1779
FatI	CATG	9 cut(s)	120, 727, 1188, 1194, 1357, 1969, 1992, 2341, 2352
FauI	CCCGC	1 cut(s)	343
FbaI	TGATCA	1 cut(s)	2332
FblI	GTMKAC	2 cut(s)	1599, 2409
Fnu4HI	GCNGC	5 cut(s)	78, 295, 635, 1888, 1891
Fsp4HI	GCNGC	5 cut(s)	78, 295, 635, 1888, 1891
FspBI	CTAG	5 cut(s)	38, 207, 483, 1314, 1958
GlaI	GCGC	3 cut(s)	422, 1734, 2287
GluI	GCNGC	5 cut(s)	78, 295, 635, 1888, 1891
HaeII	RGCGCY	1 cut(s)	424
HaeIII	GGCC	4 cut(s)	399, 644, 1356, 1801
HapII	CCGG	2 cut(s)	1062, 2276
HgaI	GACGC	2 cut(s)	475, 923
HhaI	GCGC	3 cut(s)	423, 1735, 2288
Hin1I	GRCGYC	1 cut(s)	1058
Hin1II	CATG	9 cut(s)	124, 731, 1192, 1198, 1361, 1973, 1996, 2345, 2356
Hin6I	GCGC	3 cut(s)	421, 1733, 2286
HinP1I	GCGC	3 cut(s)	421, 1733, 2286
HincII	GTYRAC	2 cut(s)	1077, 1105
HindII	GTYRAC	2 cut(s)	1077, 1105
HpaII	CCGG	2 cut(s)	1062, 2276
HphI	GGTGA	7 cut(s)	164, 295, 340, 358, 518, 1394, 1921
Hpy166II	GTNNAC	5 cut(s)	1077, 1105, 1600, 1776, 2410
Hpy188III	TCNNGA	8 cut(s)	434, 863, 926, 950, 1823, 1951, 2330, 2372
Hpy8I	GTNNAC	5 cut(s)	1077, 1105, 1600, 1776, 2410
Hpy99I	CGWCG	3 cut(s)	326, 329, 503
HpyAV	CCTTC	6 cut(s)	99, 398, 410, 1109, 1227, 1276
HpyCH4III	ACNGT	2 cut(s)	1163, 1696
HpyCH4IV	ACGT	6 cut(s)	321, 602, 1058, 1808, 1984, 2366
HpyCH4V	TGCA	5 cut(s)	44, 192, 1166, 1996, 2230
HpyF10VI	GCNNNNNNNGC	5 cut(s)	189, 335, 453, 462, 1256
HpySE526I	ACGT	6 cut(s)	321, 602, 1058, 1808, 1984, 2366
Hsp92I	GRCGYC	1 cut(s)	1058
Hsp92II	CATG	9 cut(s)	124, 731, 1192, 1198, 1361, 1973, 1996, 2345, 2356
HspAI	GCGC	3 cut(s)	421, 1733, 2286
KpnI	GGTACC	1 cut(s)	655
Ksp22I	TGATCA	1 cut(s)	2332
Kzo9I	GATC	4 cut(s)	134, 1803, 2101, 2332
LguI	GCTCTTC	1 cut(s)	1554
LmnI	GCTCC	5 cut(s)	238, 318, 456, 476, 952
Lsp1109I	GCAGC	3 cut(s)	64, 1874, 1877
LweI	GCATC	6 cut(s)	135, 921, 964, 1615, 1720, 1819
MabI	ACCWGGT	1 cut(s)	680
MaeI	CTAG	5 cut(s)	38, 207, 483, 1314, 1958
MaeII	ACGT	6 cut(s)	321, 602, 1058, 1808, 1984, 2366
MaeIII	GTNAC	6 cut(s)	598, 1657, 1809, 1921, 2189, 2245
MalI	GATC	4 cut(s)	136, 1805, 2103, 2334
MbiI	CCGCTC	1 cut(s)	183
MboI	GATC	4 cut(s)	134, 1803, 2101, 2332
MfeI	CAATTG	1 cut(s)	1550
MhlI	GDGCHC	1 cut(s)	1261
MlyI	GAGTC	6 cut(s)	218, 245, 518, 977, 1948, 2308
MmeI	TCCRAC	2 cut(s)	246, 951
MroXI	GAANNNNTTC	3 cut(s)	464, 1463, 2315
MslI	CAYNNNNRTG	3 cut(s)	1193, 2187, 2340
MspCI	CTTAAG	1 cut(s)	656
MspI	CCGG	2 cut(s)	1062, 2276
MspR9I	CCNGG	5 cut(s)	682, 1063, 1441, 1798, 2277
MunI	CAATTG	1 cut(s)	1550
MvaI	CCWGG	3 cut(s)	682, 1441, 1798
MvnI	CGCG	2 cut(s)	294, 456
MwoI	GCNNNNNNNGC	5 cut(s)	189, 335, 453, 462, 1256
NciI	CCSGG	2 cut(s)	1063, 2277
NdeII	GATC	4 cut(s)	134, 1803, 2101, 2332
NlaIII	CATG	9 cut(s)	124, 731, 1192, 1198, 1361, 1973, 1996, 2345, 2356
NlaIV	GGNNCC	4 cut(s)	240, 653, 1474, 2274
NmuCI	GTSAC	2 cut(s)	598, 2189
NspI	RCATGY	2 cut(s)	124, 731
NspV	TTCGAA	1 cut(s)	717
PciI	ACATGT	1 cut(s)	727
PciSI	GCTCTTC	1 cut(s)	1554
PdmI	GAANNNNTTC	3 cut(s)	464, 1463, 2315
PfeI	GAWTC	6 cut(s)	460, 922, 946, 1571, 1973, 2361
PflMI	CCANNNNNTGG	1 cut(s)	684
PkrI	GCNGC	5 cut(s)	79, 296, 636, 1889, 1892
PleI	GAGTC	6 cut(s)	218, 245, 517, 976, 1948, 2307
PpsI	GAGTC	6 cut(s)	218, 245, 517, 976, 1948, 2307
PpuMI	RGGWCCY	1 cut(s)	1473
PscI	ACATGT	1 cut(s)	727
PshAI	GACNNNNGTC	1 cut(s)	1712
Psp5II	RGGWCCY	1 cut(s)	1473
Psp6I	CCWGG	3 cut(s)	680, 1439, 1796
PspGI	CCWGG	3 cut(s)	680, 1439, 1796
PspN4I	GGNNCC	4 cut(s)	240, 653, 1474, 2274
PspPI	GGNCC	2 cut(s)	1354, 1473
PspPPI	RGGWCCY	1 cut(s)	1473
PstNI	CAGNNNCTG	2 cut(s)	1172, 1440
RsaI	GTAC	8 cut(s)	15, 570, 653, 1034, 1271, 1519, 2220, 2386
RsaNI	GTAC	8 cut(s)	14, 569, 652, 1033, 1270, 1518, 2219, 2385
RseI	CAYNNNNRTG	3 cut(s)	1193, 2187, 2340
SapI	GCTCTTC	1 cut(s)	1554
SatI	GCNGC	5 cut(s)	78, 295, 635, 1888, 1891
Sau3AI	GATC	4 cut(s)	134, 1803, 2101, 2332
Sau96I	GGNCC	2 cut(s)	1354, 1473
ScaI	AGTACT	1 cut(s)	2386
SchI	GAGTC	6 cut(s)	218, 245, 518, 977, 1948, 2308
ScrFI	CCNGG	5 cut(s)	682, 1063, 1441, 1798, 2277
SduI	GDGCHC	1 cut(s)	1261
SexAI	ACCWGGT	1 cut(s)	680
SfaNI	GCATC	6 cut(s)	135, 921, 964, 1615, 1720, 1819
SfcI	CTRYAG	2 cut(s)	1296, 1737
SfuI	TTCGAA	1 cut(s)	717
SinI	GGWCC	1 cut(s)	1473
SmiMI	CAYNNNNRTG	3 cut(s)	1193, 2187, 2340
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
SsiI	CCGC	9 cut(s)	181, 294, 336, 351, 369, 454, 615, 634, 1025
SspI	AATATT	2 cut(s)	63, 1431
SspMI	CTAG	5 cut(s)	38, 207, 483, 1314, 1958
StyD4I	CCNGG	5 cut(s)	680, 1061, 1439, 1796, 2275
StyI	CCWWGG	5 cut(s)	100, 987, 1468, 1476, 2253
TaaI	ACNGT	2 cut(s)	1163, 1696
TaiI	ACGT	6 cut(s)	324, 605, 1061, 1811, 1987, 2369
TaqI	TCGA	7 cut(s)	143, 468, 717, 912, 966, 1501, 2236
TatI	WGTACW	2 cut(s)	568, 2384
TauI	GCSGC	2 cut(s)	297, 637
TfiI	GAWTC	6 cut(s)	460, 922, 946, 1571, 1973, 2361
TscAI	CASTG	2 cut(s)	1168, 1173
TseFI	GTSAC	2 cut(s)	598, 2189
TseI	GCWGC	3 cut(s)	77, 1887, 1890
Tsp45I	GTSAC	2 cut(s)	598, 2189
TspDTI	ATGAA	9 cut(s)	603, 905, 1177, 1358, 1431, 1464, 1986, 2055, 2274
TspGWI	ACGGA	3 cut(s)	400, 516, 1276
TspRI	CASTG	2 cut(s)	1168, 1173
Van91I	CCANNNNNTGG	1 cut(s)	684
Vha464I	CTTAAG	1 cut(s)	656
VpaK11BI	GGWCC	1 cut(s)	1473
XapI	RAATTY	2 cut(s)	299, 1780
XceI	RCATGY	2 cut(s)	124, 731
XmiI	GTMKAC	2 cut(s)	1599, 2409
XmnI	GAANNNNTTC	3 cut(s)	464, 1463, 2315
XspI	CTAG	5 cut(s)	38, 207, 483, 1314, 1958
ZraI	GACGTC	1 cut(s)	1059
ZrmI	AGTACT	1 cut(s)	2386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.