Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0012252

Physical Location & Seq

Genomic Coordinates Forward (+)

8017771 .. 8020071

Gene Structure 2301 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g07560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGCTCATAAACCTCAGAAGAAGAATAACCATTCTTCCATTTCACACAAATCCTTCACCCTCCATTCCTCTGAATCTCATCTCAACTTCCACACAAATCCCACGCTCAGACTCTACAAATCCCCTATCAGAATCCCAACTCAAATCTATAGTTCTAAGCCAATACAGCCATGGCAAATTCACAAACCTCCTCCAAAACGTCGTCGCTTTGCCCGCTCTTCTCCTCACCGCCTGCCAAAACCTCACTACGCCAAAAACCCAGAACGGCAACGGCCTCAGCCCCTCCCTTCTCGATTCGGTTTCGAAGCGGTTCTCAATCCACGAAATGGGTCGGCAGCTGTGCGAGAATCGGTTTGATGTCGGAGCTTGCAGCGTTGCGGTGGCGGCCCAGAGAAACAGAGGTGAGTCTTTGGTGTTGCCTAACTTGAAATTGAAGGTTTTGATTGAAGCTATTGGGATGGTATTGGGAATTGTTTATGATGAACGTTTTGTGACATTTTCTTATGGTGGTCGTGTTAATATGGGACGGCATACTGCCATTAGGTACCTTAAGAACTCTGTAGAAAACCCCAGTTGGTGGTTTAGTGTTGGATTTAACCGCGAAAAGTTTGATCAACGAAATGTGAATAAGTTGTGCTTATTTATGCAAGAGAAGATAGATGATGAGATTTTGATTGATGTTATAAAGAAGTTGTTTGAATGCGGCGCAGTGAGAATTGAATTGGGTAGTTGTTGCTTTGGAAGAGGGTTTCCTCAGGAAAGCGGGTTGAGTTCGATTTTGATGAATATCTACTTTAATGGGTTTGATAAAGAAATTCAAGAAATGCGTCTGAAGAAGAATCAAGAACATCCGAAATTTGATTCGACTGAACTTGTTTCAAAGCATGATGTGTTTTTTAAGCCAGTGAAGATATATGCGGTTAGATACTTGGATGAGATATTAATAATAACCTCTGGATCTAAGATGTTGACTATGGATTTGAAGAACTGGGTTGTGAAGTACTTAGAGGGAACACTGGAATTGAAGGTGGATGGGCTAAAAACAGCTATTCATAGCGCAGTTTCTGAGAAGATTGATTTTATGGGGATGGAATTACAGGCAGTTCCGCCTTCGGTTTTGAATCCCCCCATGTCAGAAAAGGCCATCAGAGCACGAAAAAAGTACCTAAGACAGAAGGAAGTCAGAGCTCTGGAATTGAGAAATGCTAGAGAGAGGAACAGGAAGAAATTGGGATTGAAAATAATGAGTCATGTTTATAAGAAGTTGAAGAGAAGTAGTGGGTTTAAATCTGAACATCAAATTGAGAATGAAGTCAGGGAAATCTTCAGAACCTGGGGTGGCGAGACAGTGCAAGAGTTTCTTGGGTCGTTGGAGGAGCGTTGGGAATGGTACCATAGTTTATTAGCAGGTGATTTTCTCTCTTTGAGGCACATTAGAGATCAACTGCCTCAAGAGCTTGTTGATGCTTATGATAATTTCCAAGGGCAAGTACACAAGCATTTGAACCCAGTCAAAGCTAGAAGGGCATTGGAGGAAAAAGAAAGGAGGGCAAAAGAAGAAGAGGAACAGAAATATGCTAAGGCCACAGTCGAGGATTTGGCAAAGCTCTGTGTGAAAGCCGATGCACCGATAGAACTTATTAGGAAGATGGTTAGGTTGATTGGGTTTACAAATCATATGGGTCGTCCCCAACCAATTAATTTACTAACTGCACTGGAAGATGCTGATATCATTAAGTGGTATGCGGGTATAGGGAGAAGATGGCTGGAATTTTACTGCTGCTGCCATAACTTCAAGATGGTCAAAACTGTTGTGACTTATCACATGAGGTTCTCTTGCATATTGACTCTAGCGGAAAAGCACGAATCCACGAAACGGGAAGCCATGAAACATTATACTAAAGATTTGAAAGTGTTTGATTCAGATGGAAATGAAGAAGTACACTTTCCCACAGAAAGGGATGTGAAAATGATGGGAGATAAAAATCTCTCTGATCCAAAACCTGTGGATGGGGCGTTATCTTTGGCTTTGATTAGATTAGCTTCTGATGAGCCTCCGTATTCATGTGTCGCTCATTTCTGCGACAGAACTGATACCATTGTTTATCGGGTCCGACTACTGCAAAATCACTTGAATGTGAACCCCATGGATGAAAAGAAATGGGTCCCTGGTATGGGTGCAATTAACGAAAGCCTCAACTTGAAATGTTTTCCGGTTTGTCCTGATCATATACATGATTTATACATGGGGAGAATCACCTTTCAGGACATTGATTGTACTTCATTTGTGGAGGTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003674 GO:0003824 GO:0003964 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006278 GO:0006310 GO:0006314 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090615 GO:0140053 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

767

Amino Acids

88.01

Weight (kDa)

8.84

Isoelectric Point (pI)

45.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Intron_maturas2	PF01348	541 - 644	7.7e-16	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04050 AT5G04050
fragaria_vesca	FvH4_6g25070
malus_domestica	MD12G1089700.v1.1
prunus_persica	Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1
pyrus_communis	pycom12g07560
rosa_chinensis	RchiOBHm_Chr2g0124831
rosa_laevigata	RLG00000018826
rosa_multiflora	Rmu_co8339159.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119620
rosa_rugosa	Rorug02G0253000
rosa_samantha	Rh2AG068200 Rh2AG312500 Rh2BG320700 Rh2CG300700 Rh2DG338000
rosa_wichuraiana	Rw2G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	683, 1257
AarI	CACCTGC	1 cut(s)	1397
Acc36I	ACCTGC	1 cut(s)	1397
Acc65I	GGTACC	2 cut(s)	543, 1389
AccB1I	GGYRCC	2 cut(s)	543, 1389
AccB7I	CCANNNNNTGG	2 cut(s)	325, 576
AccBSI	CCGCTC	1 cut(s)	215
AccI	GTMKAC	1 cut(s)	2295
AccII	CGCG	1 cut(s)	600
AclI	AACGTT	1 cut(s)	484
AclWI	GGATC	2 cut(s)	964, 1988
AcsI	RAATTY	4 cut(s)	176, 813, 854, 1769
AcuI	CTGAAG	2 cut(s)	851, 1309
AfaI	GTAC	7 cut(s)	545, 1001, 1163, 1391, 1491, 1941, 2278
AfiI	CCNNNNNNNGG	7 cut(s)	325, 576, 1875, 1956, 2009, 2173, 2174
AflII	CTTAAG	1 cut(s)	548
AjnI	CCWGG	2 cut(s)	1331, 2167
AluBI	AGCT	9 cut(s)	337, 365, 449, 1046, 1187, 1456, 1517, 1606, 2042
AluI	AGCT	9 cut(s)	337, 365, 449, 1046, 1187, 1456, 1517, 1606, 2042
Alw21I	GWGCWC	2 cut(s)	1153, 1189
Alw26I	GTCTC	1 cut(s)	1337
AlwI	GGATC	2 cut(s)	964, 1988
AlwNI	CAGNNNCTG	2 cut(s)	1064, 1332
AoxI	GGCC	4 cut(s)	271, 384, 1140, 1581
ApeKI	GCWGC	4 cut(s)	334, 369, 1779, 1782
ApoI	RAATTY	4 cut(s)	176, 813, 854, 1769
ArsI	GACNNNNNNTTYG	2 cut(s)	961, 993
AseI	ATTAAT	2 cut(s)	941, 1698
Asp700I	GAANNNNTTC	1 cut(s)	308
Asp718I	GGTACC	2 cut(s)	543, 1389
AspLEI	GCGC	2 cut(s)	707, 1058
AspS9I	GGNCC	3 cut(s)	385, 2110, 2164
AsuHPI	GGTGA	5 cut(s)	48, 217, 413, 1421, 2248
AsuII	TTCGAA	1 cut(s)	302
AvaII	GGWCC	2 cut(s)	2110, 2164
AxyI	CCTNAGG	1 cut(s)	753
BaeI	ACNNNNGTAYC	4 cut(s)	1381, 1414, 2085, 2118
BanI	GGYRCC	2 cut(s)	543, 1389
BanII	GRGCYC	1 cut(s)	1189
Bbv12I	GWGCWC	2 cut(s)	1153, 1189
BbvCI	CCTCAGC	1 cut(s)	275
BbvI	GCAGC	4 cut(s)	346, 381, 1766, 1769
BceAI	ACGGC	3 cut(s)	280, 286, 542
BciT130I	CCWGG	2 cut(s)	1333, 2169
BclI	TGATCA	2 cut(s)	610, 2224
BcoDI	GTCTC	1 cut(s)	1337
BfaI	CTAG	3 cut(s)	1206, 1518, 1850
BfmI	CTRYAG	2 cut(s)	147, 558
BfrI	CTTAAG	1 cut(s)	548
BfuAI	ACCTGC	1 cut(s)	1397
BisI	GCNGC	6 cut(s)	335, 370, 384, 703, 1780, 1783
BlsI	GCNGC	6 cut(s)	336, 371, 385, 704, 1781, 1784
BmcAI	AGTACT	1 cut(s)	1001
Bme1390I	CCNGG	2 cut(s)	1333, 2169
Bme18I	GGWCC	2 cut(s)	2110, 2164
BmgT120I	GGNCC	3 cut(s)	385, 2110, 2164
BmiI	GGNNCC	5 cut(s)	545, 1391, 2111, 2165, 2166
BmrFI	CCNGG	2 cut(s)	1333, 2169
BmrI	ACTGGG	3 cut(s)	564, 997, 1502
BmsI	GCATC	3 cut(s)	1453, 1612, 1711
BmuI	ACTGGG	3 cut(s)	564, 997, 1502
Bpu10I	CCTNAGC	2 cut(s)	275, 1578
Bpu14I	TTCGAA	1 cut(s)	302
BpuEI	CTTGAG	1 cut(s)	1434
BsaBI	GATNNNNATC	2 cut(s)	785, 1983
BsaJI	CCNNGG	5 cut(s)	169, 1332, 1480, 2145, 2167
BsaWI	WCCGGW	1 cut(s)	2212
Bsc4I	CCNNNNNNNGG	7 cut(s)	325, 576, 1875, 1956, 2009, 2173, 2174
Bse1I	ACTGG	6 cut(s)	570, 902, 992, 1020, 1508, 1719
Bse21I	CCTNAGG	1 cut(s)	753
Bse8I	GATNNNNATC	2 cut(s)	785, 1983
BseBI	CCWGG	2 cut(s)	1333, 2169
BseDI	CCNNGG	5 cut(s)	169, 1332, 1480, 2145, 2167
BseGI	GGATG	8 cut(s)	462, 847, 937, 1036, 1092, 1966, 2014, 2155
BseJI	GATNNNNATC	2 cut(s)	785, 1983
BseLI	CCNNNNNNNGG	7 cut(s)	325, 576, 1875, 1956, 2009, 2173, 2174
BseMII	CTCAG	5 cut(s)	28, 120, 289, 767, 1056
BseNI	ACTGG	6 cut(s)	570, 902, 992, 1020, 1508, 1719
BseRI	GAGGAG	3 cut(s)	179, 212, 1388
BseXI	GCAGC	4 cut(s)	346, 381, 1766, 1769
BsgI	GTGCAG	1 cut(s)	1695
Bsh1236I	CGCG	1 cut(s)	600
BshFI	GGCC	4 cut(s)	273, 386, 1142, 1583
BshNI	GGYRCC	2 cut(s)	543, 1389
BsiHKAI	GWGCWC	2 cut(s)	1153, 1189
BsiSI	CCGG	1 cut(s)	2213
BslFI	GGGAC	3 cut(s)	537, 1671, 2150
BslI	CCNNNNNNNGG	7 cut(s)	325, 576, 1875, 1956, 2009, 2173, 2174
BsmAI	GTCTC	1 cut(s)	1337
BsmFI	GGGAC	3 cut(s)	537, 1671, 2150
BsmI	GAATGC	1 cut(s)	704
BsnI	GGCC	4 cut(s)	273, 386, 1142, 1583
Bsp119I	TTCGAA	1 cut(s)	302
Bsp1286I	GDGCHC	2 cut(s)	1153, 1189
Bsp143I	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
Bsp19I	CCATGG	2 cut(s)	169, 2145
BspANI	GGCC	4 cut(s)	273, 386, 1142, 1583
BspCNI	CTCAG	5 cut(s)	27, 119, 288, 766, 1057
BspFNI	CGCG	1 cut(s)	600
BspLI	GGNNCC	5 cut(s)	545, 1391, 2111, 2165, 2166
BspMI	ACCTGC	1 cut(s)	1397
BspPI	GGATC	2 cut(s)	964, 1988
BspQI	GCTCTTC	1 cut(s)	222
BspT104I	TTCGAA	1 cut(s)	302
BspT107I	GGYRCC	2 cut(s)	543, 1389
BspTI	CTTAAG	1 cut(s)	548
BsrBI	CCGCTC	1 cut(s)	215
BsrI	ACTGG	6 cut(s)	570, 902, 992, 1020, 1508, 1719
BssECI	CCNNGG	5 cut(s)	169, 1332, 1480, 2145, 2167
BssMI	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
BssT1I	CCWWGG	3 cut(s)	169, 1480, 2145
Bst2UI	CCWGG	2 cut(s)	1333, 2169
Bst4CI	ACNGT	3 cut(s)	1348, 1588, 1810
Bst6I	CTCTTC	4 cut(s)	222, 736, 1262, 1554
BstAFI	CTTAAG	1 cut(s)	548
BstBI	TTCGAA	1 cut(s)	302
BstC8I	GCNNGC	3 cut(s)	213, 232, 367
BstDSI	CCRYGG	2 cut(s)	169, 2145
BstF5I	GGATG	8 cut(s)	462, 847, 937, 1036, 1092, 1966, 2014, 2155
BstFNI	CGCG	1 cut(s)	600
BstHHI	GCGC	2 cut(s)	707, 1058
BstKTI	GATC	5 cut(s)	613, 959, 1441, 1996, 2227
BstMAI	GTCTC	1 cut(s)	1337
BstMBI	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
BstMWI	GCNNNNNNNGC	6 cut(s)	165, 212, 383, 1148, 1453, 1523
BstNI	CCWGG	2 cut(s)	1333, 2169
BstSCI	CCNGG	2 cut(s)	1331, 2167
BstSFI	CTRYAG	2 cut(s)	147, 558
BstUI	CGCG	1 cut(s)	600
BstV1I	GCAGC	4 cut(s)	346, 381, 1766, 1769
BstX2I	RGATCY	1 cut(s)	956
BstYI	RGATCY	1 cut(s)	956
Bsu36I	CCTNAGG	1 cut(s)	753
BsuRI	GGCC	4 cut(s)	273, 386, 1142, 1583
BtgI	CCRYGG	2 cut(s)	169, 2145
BtsCI	GGATG	8 cut(s)	462, 847, 937, 1036, 1092, 1966, 2014, 2155
BtsI	GCAGTG	1 cut(s)	714
BtsIMutI	CAGTG	5 cut(s)	714, 909, 1013, 1353, 1712
BveI	ACCTGC	1 cut(s)	1397
Cac8I	GCNNGC	3 cut(s)	213, 232, 367
CaiI	CAGNNNCTG	2 cut(s)	1064, 1332
CfoI	GCGC	2 cut(s)	707, 1058
Cfr13I	GGNCC	3 cut(s)	385, 2110, 2164
CseI	GACGC	1 cut(s)	815
Csp6I	GTAC	7 cut(s)	544, 1000, 1162, 1390, 1490, 1940, 2277
CspCI	CAANNNNNGTGG	2 cut(s)	1986, 2021
CviQI	GTAC	7 cut(s)	544, 1000, 1162, 1390, 1490, 1940, 2277
DpnI	GATC	5 cut(s)	612, 958, 1440, 1995, 2226
DpnII	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
DraI	TTTAAA	1 cut(s)	1285
Eam1104I	CTCTTC	4 cut(s)	222, 736, 1262, 1554
EarI	CTCTTC	4 cut(s)	222, 736, 1262, 1554
EciI	GGCGGA	1 cut(s)	1095
Ecl136II	GAGCTC	1 cut(s)	1187
Eco130I	CCWWGG	3 cut(s)	169, 1480, 2145
Eco24I	GRGCYC	1 cut(s)	1189
Eco32I	GATATC	1 cut(s)	1729
Eco47I	GGWCC	2 cut(s)	2110, 2164
Eco53kI	GAGCTC	1 cut(s)	1187
Eco57I	CTGAAG	2 cut(s)	851, 1309
Eco81I	CCTNAGG	1 cut(s)	753
EcoICRI	GAGCTC	1 cut(s)	1187
EcoO109I	RGGNCCY	1 cut(s)	2164
EcoRII	CCWGG	2 cut(s)	1331, 2167
EcoRV	GATATC	1 cut(s)	1729
EcoT14I	CCWWGG	3 cut(s)	169, 1480, 2145
EcoT38I	GRGCYC	1 cut(s)	1189
ErhI	CCWWGG	3 cut(s)	169, 1480, 2145
FalI	AAGNNNNNCTT	4 cut(s)	620, 652, 1344, 1376
FaqI	GGGAC	3 cut(s)	537, 1671, 2150
FauI	CCCGC	3 cut(s)	220, 755, 1738
FauNDI	CATATG	1 cut(s)	1677
FbaI	TGATCA	2 cut(s)	610, 2224
FblI	GTMKAC	1 cut(s)	2295
Fnu4HI	GCNGC	6 cut(s)	335, 370, 384, 703, 1780, 1783
FokI	GGATG	8 cut(s)	469, 834, 944, 1043, 1099, 1973, 2021, 2162
FriOI	GRGCYC	1 cut(s)	1189
Fsp4HI	GCNGC	6 cut(s)	335, 370, 384, 703, 1780, 1783
FspBI	CTAG	3 cut(s)	1206, 1518, 1850
GlaI	GCGC	2 cut(s)	706, 1057
GluI	GCNGC	6 cut(s)	335, 370, 384, 703, 1780, 1783
HaeIII	GGCC	4 cut(s)	273, 386, 1142, 1583
HapII	CCGG	1 cut(s)	2213
HgaI	GACGC	1 cut(s)	815
HhaI	GCGC	2 cut(s)	707, 1058
Hin6I	GCGC	2 cut(s)	705, 1056
HinP1I	GCGC	2 cut(s)	705, 1056
HincII	GTYRAC	1 cut(s)	969
HindII	GTYRAC	1 cut(s)	969
HpaII	CCGG	1 cut(s)	2213
HphI	GGTGA	5 cut(s)	48, 217, 413, 1421, 2248
Hpy166II	GTNNAC	6 cut(s)	969, 1492, 1668, 1942, 2140, 2296
Hpy8I	GTNNAC	6 cut(s)	969, 1492, 1668, 1942, 2140, 2296
Hpy99I	CGWCG	2 cut(s)	203, 206
HpyAV	CCTTC	7 cut(s)	63, 296, 427, 1018, 1119, 1168, 1515
HpyCH4III	ACNGT	3 cut(s)	1348, 1588, 1810
HpyCH4IV	ACGT	2 cut(s)	198, 484
HpyCH4V	TGCA	8 cut(s)	369, 646, 1351, 1625, 1712, 1839, 2122, 2180
HpyF10VI	GCNNNNNNNGC	6 cut(s)	165, 212, 383, 1148, 1453, 1523
HpySE526I	ACGT	2 cut(s)	198, 484
HspAI	GCGC	2 cut(s)	705, 1056
KflI	GGGWCCC	1 cut(s)	2164
KpnI	GGTACC	2 cut(s)	547, 1393
Ksp22I	TGATCA	2 cut(s)	610, 2224
Kzo9I	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
LguI	GCTCTTC	1 cut(s)	222
LmnI	GCTCC	2 cut(s)	362, 1375
Lsp1109I	GCAGC	4 cut(s)	346, 381, 1766, 1769
LweI	GCATC	3 cut(s)	1453, 1612, 1711
MaeI	CTAG	3 cut(s)	1206, 1518, 1850
MaeII	ACGT	2 cut(s)	198, 484
MaeIII	GTNAC	2 cut(s)	490, 1813
MalI	GATC	5 cut(s)	612, 958, 1440, 1995, 2226
MbiI	CCGCTC	1 cut(s)	215
MboI	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
MflI	RGATCY	1 cut(s)	956
MhlI	GDGCHC	2 cut(s)	1153, 1189
MlyI	GAGTC	4 cut(s)	104, 413, 1255, 1840
MmeI	TCCRAC	4 cut(s)	340, 568, 1350, 2137
MroXI	GAANNNNTTC	1 cut(s)	308
MslI	CAYNNNNRTG	2 cut(s)	2133, 2232
MspA1I	CMGCKG	1 cut(s)	337
MspCI	CTTAAG	1 cut(s)	548
MspI	CCGG	1 cut(s)	2213
MspR9I	CCNGG	2 cut(s)	1333, 2169
Mva1269I	GAATGC	1 cut(s)	704
MvaI	CCWGG	2 cut(s)	1333, 2169
MvnI	CGCG	1 cut(s)	600
MwoI	GCNNNNNNNGC	6 cut(s)	165, 212, 383, 1148, 1453, 1523
NcoI	CCATGG	2 cut(s)	169, 2145
NdeI	CATATG	1 cut(s)	1677
NdeII	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
NlaIV	GGNNCC	5 cut(s)	545, 1391, 2111, 2165, 2166
NmuCI	GTSAC	2 cut(s)	490, 1813
NspV	TTCGAA	1 cut(s)	302
PaqCI	CACCTGC	1 cut(s)	1397
PciSI	GCTCTTC	1 cut(s)	222
PctI	GAATGC	1 cut(s)	704
PdmI	GAANNNNTTC	1 cut(s)	308
PflMI	CCANNNNNTGG	2 cut(s)	325, 576
PkrI	GCNGC	6 cut(s)	336, 371, 385, 704, 1781, 1784
PleI	GAGTC	4 cut(s)	104, 412, 1254, 1840
PpsI	GAGTC	4 cut(s)	104, 412, 1254, 1840
PpuMI	RGGWCCY	1 cut(s)	2164
PshBI	ATTAAT	2 cut(s)	941, 1698
PsiI	TTATAA	2 cut(s)	683, 1257
Psp124BI	GAGCTC	1 cut(s)	1189
Psp1406I	AACGTT	1 cut(s)	484
Psp5II	RGGWCCY	1 cut(s)	2164
Psp6I	CCWGG	2 cut(s)	1331, 2167
PspGI	CCWGG	2 cut(s)	1331, 2167
PspN4I	GGNNCC	5 cut(s)	545, 1391, 2111, 2165, 2166
PspPI	GGNCC	3 cut(s)	385, 2110, 2164
PspPPI	RGGWCCY	1 cut(s)	2164
PstNI	CAGNNNCTG	2 cut(s)	1064, 1332
PsuI	RGATCY	1 cut(s)	956
PvuII	CAGCTG	1 cut(s)	337
RsaI	GTAC	7 cut(s)	545, 1001, 1163, 1391, 1491, 1941, 2278
RsaNI	GTAC	7 cut(s)	544, 1000, 1162, 1390, 1490, 1940, 2277
RseI	CAYNNNNRTG	2 cut(s)	2133, 2232
SacI	GAGCTC	1 cut(s)	1189
SapI	GCTCTTC	1 cut(s)	222
SatI	GCNGC	6 cut(s)	335, 370, 384, 703, 1780, 1783
Sau3AI	GATC	5 cut(s)	610, 956, 1438, 1993, 2224
Sau96I	GGNCC	3 cut(s)	385, 2110, 2164
ScaI	AGTACT	1 cut(s)	1001
SchI	GAGTC	4 cut(s)	104, 413, 1255, 1840
ScrFI	CCNGG	2 cut(s)	1333, 2169
SduI	GDGCHC	2 cut(s)	1153, 1189
SfaNI	GCATC	3 cut(s)	1453, 1612, 1711
SfcI	CTRYAG	2 cut(s)	147, 558
SfuI	TTCGAA	1 cut(s)	302
SinI	GGWCC	2 cut(s)	2110, 2164
SmiMI	CAYNNNNRTG	2 cut(s)	2133, 2232
SmlI	CTYRAG	2 cut(s)	548, 1449
SmoI	CTYRAG	2 cut(s)	548, 1449
SspMI	CTAG	3 cut(s)	1206, 1518, 1850
SstI	GAGCTC	1 cut(s)	1189
StyD4I	CCNGG	2 cut(s)	1331, 2167
StyI	CCWWGG	3 cut(s)	169, 1480, 2145
TaaI	ACNGT	3 cut(s)	1348, 1588, 1810
TaiI	ACGT	2 cut(s)	201, 487
TaqI	TCGA	5 cut(s)	291, 302, 773, 863, 1590
TatI	WGTACW	4 cut(s)	999, 1489, 1939, 2276
TauI	GCSGC	2 cut(s)	386, 705
TscAI	CASTG	5 cut(s)	714, 909, 1020, 1353, 1719
TseFI	GTSAC	2 cut(s)	490, 1813
TseI	GCWGC	4 cut(s)	334, 369, 1779, 1782
Tsp45I	GTSAC	2 cut(s)	490, 1813
TspDTI	ATGAA	9 cut(s)	495, 797, 1040, 1323, 1901, 1947, 2052, 2166, 2271
TspGWI	ACGGA	1 cut(s)	2046
TspRI	CASTG	5 cut(s)	714, 909, 1020, 1353, 1719
Van91I	CCANNNNNTGG	2 cut(s)	325, 576
Vha464I	CTTAAG	1 cut(s)	548
VpaK11BI	GGWCC	2 cut(s)	2110, 2164
VspI	ATTAAT	2 cut(s)	941, 1698
XapI	RAATTY	4 cut(s)	176, 813, 854, 1769
XcmI	CCANNNNNNNNNTGG	1 cut(s)	167
XmiI	GTMKAC	1 cut(s)	2295
XmnI	GAANNNNTTC	1 cut(s)	308
XspI	CTAG	3 cut(s)	1206, 1518, 1850
ZrmI	AGTACT	1 cut(s)	1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.