FvH4_6g34480

Protein of unknown function (DUF1296)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005772
Physical Location & Seq
Forward (+)
27208262 .. 27216775
8514 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g34480.t1

Sequence Viewer

Length: 2748 bp
ATGGTCTCCGGGTCGCGAATCGAAGGTGGGAATCAGATAATCTCCGCCGGAGTGAGAAAAACTATCCAAACCATCAAAGAAATAGTGGGCAATCACTCTGATATTGATATCTATTGGGCTCTTAAAGAGACCGATATGGATCCTAATGAAACTGCCCAGAAATTACTCAACCAAGACCCGTTTCATGAGGTGAAGAGAAAAAGAGACAAAAAGAAGGAGGTGCCACCTAAGAGTATCGGCCAAAAGGTTCTTACCGAACCAAGAAGACATGTTGAGAGTGCTGGTCAAGGACCAAGATCAAATACAACTTCTGAACGTGTTGTGGAGCCTAAAAGACATTTTGAGACTGCTGTCCAAGGACCTAGATCCAATACAAATTCTGATCGTAATGTTGAGCCTAGAAGACAGTTTGACAGTGCAGGTCATGGACCAAAATTTAATAAGTTTTCTGATCGGAATGTTGAGCCAAGAAGACATTTTGAGAATGCAGGTCAAGGACCAAGACAAAGCTCATTTTCTGATCGGAATGTTAGAAGAGGTGGTTATGTTCGGAGGGGTTTCCCTGGAATCAGCAGAGGTACAGGAATTAGCAGAGAGTTTCGTGTTGTGAGAGACAACAGAGCTAACCATAATATGGATGGAGAAACCAAGCCTGCTTCACCTCAATGTACTACATCGACCAACGAGCAAGTGATTTCAAATGTTTCTGAGAAGGGCCAAACAGGAATTTCAAGTAATCAAAAGTCATTTAATAGACAGCACGCCTCACAAGCATTGAACGGGCAAACTGATTCTCGAATTAGAACCAGTGATGCTAATTCAACTGGTACGATTAGAAAGGAGACATCAGCGGAGAAGCGAGTTGCTCTTCCAAATTCAGCTTCACGGGTACAAGCAGGGAGGCCAAACAACTCGCAACCACATTCTGCATCAAACACCTCTGTTATTGGAGTGTATTCCTCGTCCACAGATCCTGTTCATGTGCCGTCTCCTGATTCTAGACCGTCTGCTTCTGTTGGTGCAATTAAGCGTGAAGTTGGGGTGGTTGGCGTTCGGAAACAGTCTTCTGACAACTCCAAGTCAGCTGTACCAAGTAGTTCTTTCTCTAATTCACTTTTGGGGAAAGAAGGCACTGCGGAATCATTTAGATCTTTGACTGGTATCTCTAAACCTGATCAGCTCGACCAAACTTCTGAATCTGTGATGCCTAGCATACCAGTCAGCAGAACTTTCATCAGTAATCAGCACAATGTCAGGCCTCATCAACAACCTGTGGGTCATCAGAAAGATGCAGCTTCCCAGCCTAACAAGGAGTGGAAACCTAAATCAAGTCAGAAGCCAAGCTCTAATAATCCTGGAGTCATTGGAACACCAACAAAATCTGCTTCTCCTCCTGATGATTCAAAGGTCTCAGAGTCTGAAGCGGTTCAGTTGCAAGATAAGCTTGCCCGAGTAAATATATATGAGAACTGCAATGTTGTGATAGCGCAAAATATTAGAGTCCCTGAGAGTGACCGTTTTCGGCTAACCTTTGGAAGCTTGGGGACAGAGTTAGTTAATGGATTTCAAGCTGGACCTACAGAGGAGTCGAACAGGGAACCTCAAGCAAGTTTGTCAACATCAGCTCCCGAGTCACACAGTGATGAGGCCAGCACGAAGCCAATAGATTTATTAGATGACCAAGTTAGGAATTCAGGATCCGATTTTTCCGCACCATCTGCAGTGCCTGAGCATCTGCCTGAGAAAAGAGAGACATCGAGTCCTCAGAGTTTGGACAATTATGCAGATATTGGTTTGGTTCGAGACAATAGTCCATCCTTTACACCTTCAGATTCGCAGAACCAAGATCCACCAGAGATGCAAGGTTTTACGGCATTTGATCCTCAGACTGGTTATGATATACCTTATTACAGACCCAGTATGGATGAAAGTGTACACGGACAGGGTCTACCTTCTCCTCAGGAGGCATTGAGTTCACACAATTCCAACAGTATCCCTGCATCAACAGTTGCCATGGTACAACAGCAACCACCGCATGTGGCGCAGATGTACCCGCAAGTTCATGTTTCACATTATGCTAATATGATGCCATATCGTCAGTATATCTCACCAGTTTATGTTCCACCAATGGCTGTGCCTGGCTATTCCAATAATCCTGCCTATCCTCACATGTCTAATGGCAACAGCTACTTGCTGATGCCTGGAGGTGCTTCCCACCTAAATGCTAACAGCCTCAAGTATGGTGTTCAGCAATTTAAGCCCGTAGCTGGAAGTCCCACTGGGTTTGGAAATTTTACTAACCCAGCGGGTTATGCAATGAATGCCCCTGGTGTAGTTGGAGGTGCTACTGGACTCGAAGACTCATCAAGAATGAAATACAAAGATGGCAATCTTTATGTTCCAAATCCACAGGCGGAGACATCAGAGATTTGGATTCAGAACCCTAGGGAGCATCCAGGAATGCAATCCGCTCCATATTACAACATGCCTGGGCAAACACCTCATGCTGCTTATATGCCGTCCCATGGTGGCCACGCTTCCTTCAATGCAGCTGCTGCACAATCTTCACACATGCAGTACCCAGGAATGTACCATCCTCCTCAGCCTGCTGCAATGGCCAGTCCGCACCATATGGGCCCTGCAATGCCTGGTAATGTTGGAGTGGGGGTGGCTGCAGCTGCTCCTGGGGCACAGGCATATCAGCAGCAGCCCCAGTTGAACCATATGAACTGGACAACAAACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1296

Protein Analysis

916

Amino Acids

99.23

Weight (kDa)

8.85

Isoelectric Point (pI)

53.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 14 - 73 2.4e-30 GBF-interacting protein 1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 410, 479
AccB1I GGYRCC 1 cut(s) 220
AccB7I CCANNNNNTGG 1 cut(s) 634
AccBSI CCGCTC 1 cut(s) 2471
AccI GTMKAC 1 cut(s) 1948
AccII CGCG 1 cut(s) 16
AclWI GGATC 8 cut(s) 134, 147, 360, 965, 1692, 1705, 1841, 1874
AcoI YGGCCR 3 cut(s) 238, 2530, 2616
AcsI RAATTY 6 cut(s) 376, 434, 726, 874, 1690, 2290
AcuI CTGAAG 2 cut(s) 1440, 1812
AdeI CACNNNGTG 1 cut(s) 1640
AfiI CCNNNNNNNGG 4 cut(s) 634, 1889, 2267, 2525
AflIII ACRYGT 3 cut(s) 268, 316, 2169
AgsI TTSAA 8 cut(s) 699, 732, 778, 822, 1404, 1568, 2545, 2719
AhdI GACNNNNNGTC 1 cut(s) 1758
AjuI GAANNNNNNNTTGG 4 cut(s) 165, 197, 865, 897
AlwI GGATC 8 cut(s) 134, 147, 360, 965, 1692, 1705, 1841, 1874
AlwNI CAGNNNCTG 4 cut(s) 974, 1418, 1727, 2555
Ama87I CYCGRG 2 cut(s) 1449, 1628
AoxI GGCC 8 cut(s) 238, 715, 902, 1256, 1647, 2530, 2616, 2635
ApaI GGGCCC 1 cut(s) 2639
ApoI RAATTY 6 cut(s) 376, 434, 726, 874, 1690, 2290
Asp700I GAANNNNTTC 1 cut(s) 1425
AspA2I CCTAGG 1 cut(s) 2444
AspLEI GCGC 2 cut(s) 1489, 2044
AspS9I GGNCC 8 cut(s) 290, 359, 428, 497, 715, 1574, 2635, 2636
AsuC2I CCSGG 1 cut(s) 10
AsuHPI GGTGA 3 cut(s) 202, 651, 2100
AvaI CYCGRG 2 cut(s) 1449, 1628
AvaII GGWCC 5 cut(s) 290, 359, 428, 497, 1574
AvrII CCTAGG 1 cut(s) 2444
AxyI CCTNAGG 1 cut(s) 1959
BaeGI GKGCMC 2 cut(s) 2639, 2692
BalI TGGCCA 2 cut(s) 2532, 2618
BamHI GGATCC 2 cut(s) 139, 1697
BanI GGYRCC 1 cut(s) 220
BanII GRGCYC 2 cut(s) 121, 2639
BbsI GAAGAC 5 cut(s) 271, 409, 478, 1056, 2364
BbvCI CCTCAGC 1 cut(s) 2601
BccI CCATC 6 cut(s) 80, 632, 1723, 1822, 2378, 2601
BceAI ACGGC 3 cut(s) 970, 1887, 2503
BciVI GTATCC 1 cut(s) 2003
BclI TGATCA 1 cut(s) 1174
BcnI CCSGG 1 cut(s) 10
BfaI CTAG 5 cut(s) 363, 399, 999, 1209, 2445
BfmI CTRYAG 3 cut(s) 1578, 1719, 2673
BfuAI ACCTGC 2 cut(s) 410, 479
BfuI GTATCC 1 cut(s) 2003
BglII AGATCT 1 cut(s) 1148
BlnI CCTAGG 1 cut(s) 2444
Bme18I GGWCC 5 cut(s) 290, 359, 428, 497, 1574
BmeRI GACNNNNNGTC 1 cut(s) 1758
BmeT110I CYCGRG 2 cut(s) 1449, 1628
BmgT120I GGNCC 8 cut(s) 290, 359, 428, 497, 715, 1574, 2635, 2636
BmiI GGNNCC 6 cut(s) 141, 222, 327, 1599, 1699, 2637
BmrI ACTGGG 3 cut(s) 1911, 2289, 2707
BmuI ACTGGG 3 cut(s) 1911, 2289, 2707
BoxI GACNNNNGTC 2 cut(s) 350, 1809
BpiI GAAGAC 5 cut(s) 271, 409, 478, 1056, 2364
BpmI CTGGAG 2 cut(s) 1377, 2223
Bpu10I CCTNAGC 2 cut(s) 1728, 2601
BpuEI CTTGAG 2 cut(s) 1587, 2219
BpuMI CCSGG 1 cut(s) 10
BsaBI GATNNNNATC 2 cut(s) 138, 2388
BsaI GGTCTC 3 cut(s) 10, 122, 1414
BsaJI CCNNGG 9 cut(s) 355, 562, 2013, 2326, 2444, 2489, 2524, 2581, 2684
BsaXI ACNNNNNCTCC 4 cut(s) 1609, 1639, 2652, 2682
Bsc4I CCNNNNNNNGG 4 cut(s) 634, 1889, 2267, 2525
Bse21I CCTNAGG 1 cut(s) 1959
Bse3DI GCAATG 4 cut(s) 1480, 2322, 2619, 2649
Bse8I GATNNNNATC 2 cut(s) 138, 2388
BseDI CCNNGG 9 cut(s) 355, 562, 2013, 2326, 2444, 2489, 2524, 2581, 2684
BseGI GGATG 5 cut(s) 643, 1814, 1930, 2452, 2593
BseJI GATNNNNATC 2 cut(s) 138, 2388
BseLI CCNNNNNNNGG 4 cut(s) 634, 1889, 2267, 2525
BseMI GCAATG 4 cut(s) 1480, 2322, 2619, 2649
BseMII CTCAG 9 cut(s) 699, 1425, 1497, 1719, 1731, 1778, 1898, 1973, 2615
BseRI GAGGAG 4 cut(s) 1380, 1598, 1947, 2589
BseSI GKGCMC 2 cut(s) 2639, 2692
BseYI CCCAGC 2 cut(s) 1299, 2302
BsgI GTGCAG 2 cut(s) 438, 2541
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 8 cut(s) 240, 717, 904, 1258, 1649, 2532, 2618, 2637
BshNI GGYRCC 1 cut(s) 220
BsiHKCI CYCGRG 2 cut(s) 1449, 1628
BsiSI CCGG 2 cut(s) 9, 48
BslFI GGGAC 4 cut(s) 1487, 1558, 2259, 2506
BslI CCNNNNNNNGG 4 cut(s) 634, 1889, 2267, 2525
BsmBI CGTCTC 1 cut(s) 993
BsmFI GGGAC 4 cut(s) 1487, 1558, 2259, 2506
BsmI GAATGC 3 cut(s) 490, 2326, 2466
BsnI GGCC 8 cut(s) 240, 717, 904, 1258, 1649, 2532, 2618, 2637
Bso31I GGTCTC 3 cut(s) 10, 122, 1414
BsoBI CYCGRG 2 cut(s) 1449, 1628
Bsp120I GGGCCC 1 cut(s) 2635
Bsp1286I GDGCHC 3 cut(s) 121, 2639, 2692
Bsp1407I TGTACA 1 cut(s) 1933
Bsp19I CCATGG 2 cut(s) 2013, 2524
Bsp68I TCGCGA 1 cut(s) 16
BspANI GGCC 8 cut(s) 240, 717, 904, 1258, 1649, 2532, 2618, 2637
BspCNI CTCAG 9 cut(s) 700, 1424, 1498, 1720, 1732, 1777, 1897, 1972, 2614
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 6 cut(s) 141, 222, 327, 1599, 1699, 2637
BspMAI CTGCAG 2 cut(s) 1723, 2677
BspMI ACCTGC 2 cut(s) 410, 479
BspPI GGATC 8 cut(s) 134, 147, 360, 965, 1692, 1705, 1841, 1874
BspQI GCTCTTC 1 cut(s) 873
BspT107I GGYRCC 1 cut(s) 220
BspTNI GGTCTC 3 cut(s) 10, 122, 1414
BsrBI CCGCTC 1 cut(s) 2471
BsrDI GCAATG 4 cut(s) 1480, 2322, 2619, 2649
BsrGI TGTACA 1 cut(s) 1933
BssECI CCNNGG 9 cut(s) 355, 562, 2013, 2326, 2444, 2489, 2524, 2581, 2684
BssT1I CCWWGG 4 cut(s) 355, 2013, 2444, 2524
Bst4CI ACNGT 8 cut(s) 408, 416, 1005, 1062, 1517, 1640, 1991, 2008
Bst6I CTCTTC 3 cut(s) 188, 529, 873
BstAPI GCANNNNNTGC 3 cut(s) 1718, 2321, 2555
BstAUI TGTACA 1 cut(s) 1933
BstC8I GCNNGC 5 cut(s) 654, 762, 1446, 1651, 2607
BstDSI CCRYGG 2 cut(s) 2013, 2524
BstF5I GGATG 5 cut(s) 643, 1814, 1930, 2452, 2593
BstFNI CGCG 1 cut(s) 16
BstHHI GCGC 2 cut(s) 1489, 2044
BstNSI RCATGY 5 cut(s) 272, 2039, 2173, 2488, 2575
BstPAI GACNNNNGTC 2 cut(s) 350, 1809
BstSFI CTRYAG 3 cut(s) 1578, 1719, 2673
BstSLI GKGCMC 2 cut(s) 2639, 2692
BstUI CGCG 1 cut(s) 16
BstV2I GAAGAC 5 cut(s) 271, 409, 478, 1056, 2364
BstX2I RGATCY 6 cut(s) 139, 365, 970, 1148, 1697, 1846
BstYI RGATCY 6 cut(s) 139, 365, 970, 1148, 1697, 1846
Bsu36I CCTNAGG 1 cut(s) 1959
BsuI GTATCC 1 cut(s) 2003
BsuRI GGCC 8 cut(s) 240, 717, 904, 1258, 1649, 2532, 2618, 2637
BtgI CCRYGG 2 cut(s) 2013, 2524
BtsCI GGATG 5 cut(s) 643, 1814, 1930, 2452, 2593
BtsI GCAGTG 2 cut(s) 1131, 1728
BtsIMutI CAGTG 6 cut(s) 421, 814, 1131, 1645, 1728, 2277
BtuMI TCGCGA 1 cut(s) 16
BveI ACCTGC 2 cut(s) 410, 479
Cac8I GCNNGC 5 cut(s) 654, 762, 1446, 1651, 2607
CaiI CAGNNNCTG 4 cut(s) 974, 1418, 1727, 2555
CciI TCATGA 1 cut(s) 184
CfoI GCGC 2 cut(s) 1489, 2044
Cfr13I GGNCC 8 cut(s) 290, 359, 428, 497, 715, 1574, 2635, 2636
CspCI CAANNNNNGTGG 2 cut(s) 2266, 2301
DraIII CACNNNGTG 1 cut(s) 1640
DriI GACNNNNNGTC 1 cut(s) 1758
EaeI YGGCCR 3 cut(s) 238, 2530, 2616
Eam1104I CTCTTC 3 cut(s) 188, 529, 873
Eam1105I GACNNNNNGTC 1 cut(s) 1758
EarI CTCTTC 3 cut(s) 188, 529, 873
EciI GGCGGA 2 cut(s) 34, 2429
Eco130I CCWWGG 4 cut(s) 355, 2013, 2444, 2524
Eco147I AGGCCT 1 cut(s) 1258
Eco24I GRGCYC 2 cut(s) 121, 2639
Eco31I GGTCTC 3 cut(s) 10, 122, 1414
Eco32I GATATC 1 cut(s) 109
Eco47I GGWCC 5 cut(s) 290, 359, 428, 497, 1574
Eco57I CTGAAG 2 cut(s) 1440, 1812
Eco81I CCTNAGG 1 cut(s) 1959
Eco88I CYCGRG 2 cut(s) 1449, 1628
EcoO109I RGGNCCY 2 cut(s) 359, 2636
EcoRI GAATTC 1 cut(s) 1690
EcoRV GATATC 1 cut(s) 109
EcoT14I CCWWGG 4 cut(s) 355, 2013, 2444, 2524
EcoT38I GRGCYC 2 cut(s) 121, 2639
ErhI CCWWGG 4 cut(s) 355, 2013, 2444, 2524
Esp3I CGTCTC 1 cut(s) 993
FalI AAGNNNNNCTT 4 cut(s) 1084, 1116, 1428, 1460
FaqI GGGAC 4 cut(s) 1487, 1558, 2259, 2506
FauI CCCGC 2 cut(s) 2061, 2299
FauNDI CATATG 2 cut(s) 2631, 2724
FbaI TGATCA 1 cut(s) 1174
FblI GTMKAC 1 cut(s) 1948
FokI GGATG 5 cut(s) 650, 1801, 1937, 2439, 2580
FriOI GRGCYC 2 cut(s) 121, 2639
FspBI CTAG 5 cut(s) 363, 399, 999, 1209, 2445
GlaI GCGC 2 cut(s) 1488, 2043
GsaI CCCAGC 2 cut(s) 1303, 2306
GsuI CTGGAG 2 cut(s) 1377, 2223
HaeIII GGCC 8 cut(s) 240, 717, 904, 1258, 1649, 2532, 2618, 2637
HapII CCGG 2 cut(s) 9, 48
HhaI GCGC 2 cut(s) 1489, 2044
Hin6I GCGC 2 cut(s) 1487, 2042
HinP1I GCGC 2 cut(s) 1487, 2042
HincII GTYRAC 1 cut(s) 1617
HindII GTYRAC 1 cut(s) 1617
HindIII AAGCTT 2 cut(s) 1442, 1537
HpaII CCGG 2 cut(s) 9, 48
HphI GGTGA 3 cut(s) 202, 651, 2100
Hpy166II GTNNAC 6 cut(s) 966, 1617, 1934, 1936, 1949, 1976
Hpy8I GTNNAC 6 cut(s) 966, 1617, 1934, 1936, 1949, 1976
HpyAV CCTTC 7 cut(s) 17, 208, 706, 1121, 1836, 1962, 2551
HpyCH4III ACNGT 8 cut(s) 408, 416, 1005, 1062, 1517, 1640, 1991, 2008
HpyCH4IV ACGT 1 cut(s) 316
HpySE526I ACGT 1 cut(s) 316
HspAI GCGC 2 cut(s) 1487, 2042
Ksp22I TGATCA 1 cut(s) 1174
LguI GCTCTTC 1 cut(s) 873
LmnI GCTCC 5 cut(s) 325, 1630, 2449, 2476, 2686
MaeI CTAG 5 cut(s) 363, 399, 999, 1209, 2445
MaeII ACGT 1 cut(s) 316
MaeIII GTNAC 2 cut(s) 1511, 1632
MbiI CCGCTC 1 cut(s) 2471
MboII GAAGA 9 cut(s) 205, 276, 414, 483, 546, 860, 1056, 2369, 2556
MflI RGATCY 6 cut(s) 139, 365, 970, 1148, 1697, 1846
MhlI GDGCHC 3 cut(s) 121, 2639, 2692
MlsI TGGCCA 2 cut(s) 2532, 2618
MluNI TGGCCA 2 cut(s) 2532, 2618
MlyI GAGTC 8 cut(s) 1368, 1424, 1509, 1595, 1640, 1768, 2346, 2354
MmeI TCCRAC 3 cut(s) 2010, 2317, 2638
Mox20I TGGCCA 2 cut(s) 2532, 2618
MroXI GAANNNNTTC 1 cut(s) 1425
MscI TGGCCA 2 cut(s) 2532, 2618
MseI TTAA 6 cut(s) 123, 438, 750, 1026, 1557, 2256
MslI CAYNNNNRTG 3 cut(s) 664, 1641, 2220
Msp20I TGGCCA 2 cut(s) 2532, 2618
MspA1I CMGCKG 5 cut(s) 851, 1085, 2306, 2552, 2678
MspI CCGG 2 cut(s) 9, 48
Mva1269I GAATGC 3 cut(s) 490, 2326, 2466
MvnI CGCG 1 cut(s) 16
NciI CCSGG 1 cut(s) 10
NcoI CCATGG 2 cut(s) 2013, 2524
NdeI CATATG 2 cut(s) 2631, 2724
NlaIV GGNNCC 6 cut(s) 141, 222, 327, 1599, 1699, 2637
NmuCI GTSAC 2 cut(s) 1511, 1632
NruI TCGCGA 1 cut(s) 16
NspI RCATGY 5 cut(s) 272, 2039, 2173, 2488, 2575
PagI TCATGA 1 cut(s) 184
PceI AGGCCT 1 cut(s) 1258
PciI ACATGT 2 cut(s) 268, 2169
PciSI GCTCTTC 1 cut(s) 873
PctI GAATGC 3 cut(s) 490, 2326, 2466
PdmI GAANNNNTTC 1 cut(s) 1425
PflFI GACNNNGTC 1 cut(s) 1944
PflMI CCANNNNNTGG 1 cut(s) 634
PfoI TCCNGGA 2 cut(s) 1354, 2455
PleI GAGTC 8 cut(s) 1367, 1423, 1508, 1594, 1639, 1767, 2346, 2354
PpsI GAGTC 8 cut(s) 1367, 1423, 1508, 1594, 1639, 1767, 2346, 2354
PpuMI RGGWCCY 1 cut(s) 359
PscI ACATGT 2 cut(s) 268, 2169
PshAI GACNNNNGTC 2 cut(s) 350, 1809
Psp5II RGGWCCY 1 cut(s) 359
PspFI CCCAGC 2 cut(s) 1299, 2302
PspN4I GGNNCC 6 cut(s) 141, 222, 327, 1599, 1699, 2637
PspOMI GGGCCC 1 cut(s) 2635
PspPI GGNCC 8 cut(s) 290, 359, 428, 497, 715, 1574, 2635, 2636
PspPPI RGGWCCY 1 cut(s) 359
PstI CTGCAG 2 cut(s) 1723, 2677
PstNI CAGNNNCTG 4 cut(s) 974, 1418, 1727, 2555
PsuI RGATCY 6 cut(s) 139, 365, 970, 1148, 1697, 1846
PsyI GACNNNGTC 1 cut(s) 1944
PvuII CAGCTG 3 cut(s) 1085, 2552, 2678
RruI TCGCGA 1 cut(s) 16
RseI CAYNNNNRTG 3 cut(s) 664, 1641, 2220
SapI GCTCTTC 1 cut(s) 873
SaqAI TTAA 6 cut(s) 123, 438, 750, 1026, 1557, 2256
Sau96I GGNCC 8 cut(s) 290, 359, 428, 497, 715, 1574, 2635, 2636
SchI GAGTC 8 cut(s) 1368, 1424, 1509, 1595, 1640, 1768, 2346, 2354
SduI GDGCHC 3 cut(s) 121, 2639, 2692
SfcI CTRYAG 3 cut(s) 1578, 1719, 2673
SinI GGWCC 5 cut(s) 290, 359, 428, 497, 1574
SmiMI CAYNNNNRTG 3 cut(s) 664, 1641, 2220
SmlI CTYRAG 2 cut(s) 1602, 2234
SmoI CTYRAG 2 cut(s) 1602, 2234
SseBI AGGCCT 1 cut(s) 1258
SspI AATATT 1 cut(s) 1495
SspMI CTAG 5 cut(s) 363, 399, 999, 1209, 2445
StuI AGGCCT 1 cut(s) 1258
StyI CCWWGG 4 cut(s) 355, 2013, 2444, 2524
TaaI ACNGT 8 cut(s) 408, 416, 1005, 1062, 1517, 1640, 1991, 2008
TaiI ACGT 1 cut(s) 319
TaqI TCGA 8 cut(s) 21, 677, 796, 1182, 1589, 1757, 1801, 2355
TaqII GACCGA 1 cut(s) 146
TatI WGTACW 2 cut(s) 668, 1933
Tru1I TTAA 6 cut(s) 123, 438, 750, 1026, 1557, 2256
Tru9I TTAA 6 cut(s) 123, 438, 750, 1026, 1557, 2256
TscAI CASTG 6 cut(s) 421, 814, 1138, 1645, 1728, 2284
TseFI GTSAC 2 cut(s) 1511, 1632
Tsp45I GTSAC 2 cut(s) 1511, 1632
TspDTI ATGAA 9 cut(s) 162, 173, 968, 1222, 1941, 2051, 2333, 2387, 2741
TspGWI ACGGA 1 cut(s) 1953
TspRI CASTG 6 cut(s) 421, 814, 1138, 1645, 1728, 2284
Tth111I GACNNNGTC 1 cut(s) 1944
Van91I CCANNNNNTGG 1 cut(s) 634
VpaK11BI GGWCC 5 cut(s) 290, 359, 428, 497, 1574
XapI RAATTY 6 cut(s) 376, 434, 726, 874, 1690, 2290
XbaI TCTAGA 1 cut(s) 998
XceI RCATGY 5 cut(s) 272, 2039, 2173, 2488, 2575
XcmI CCANNNNNNNNNTGG 1 cut(s) 635
XmaJI CCTAGG 1 cut(s) 2444
XmiI GTMKAC 1 cut(s) 1948
XmnI GAANNNNTTC 1 cut(s) 1425
XspI CTAG 5 cut(s) 363, 399, 999, 1209, 2445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.