MD17G1170400.v1.1

Protein of unknown function (DUF1296)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0005772
Physical Location & Seq
Reverse (-)
17460847 .. 17469946
9100 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1170400.v1.1.491

Sequence Viewer

Length: 2634 bp
ATGGTCGCCGGGTCGCGAATCGAAGGTGGGACTCAGATAATCTCAGCAGGAGTGAGAAAAACGATTCAATCCATTAAAGAAATAGTGGGTAATTACTCGGATTTTGATATCTATTGGGCTCTCAAAGAAACCGACATGGATCCTAATGAAACCGCCCAGAAATTGCTCAACCAAGACCCATTTCATGTTGTGAAGAGAAAAAGAGACAAAAGGAAGGAGGTATTCTCTAATAGTAATGGGCAGGTTCCTGTGGATGCAAGGAGACATTTTGAGAGTGCAGGCCAAGGACCCACATCAAATACATCCTCTGATCGTCCCCCTTCTCAAAATACAACTTCTGATCGTCCTTCATCTCACAGCACATTTTCTGATCGTCCCCCATATCGCAATACATTTTCTGATCGTAATGTTAGAAGAGGAGGTTATGCTCGTGGCAGTTCAACTGGAATCAGCAGAGAATTCCGTGTTGTGAGAGACAACCGAATTAACGGTAATGTCAATAAAGAAATGAAGCCTGCTTCACTACAGTGTACAACTTCCACCAATGAGCAAGCGTCAAATGATTCTGAAAAGGGCCAAACAGCAAGTTCAAAGAGTCAAAAGCCATCTAGCAGACAAAATTCGTCTCATGGATTGAATGGGCAAACTCAAATTAGAAGCAGTGGTGCTAATTCAACTGGTAATGTTAGAACAGAGACATTAGTGGAGAAGCGAGTCACTCTTCCAATTGCAGCTTCCCGGGTGCAAGCTGGGAAGCCAAACAATTCCCAACCACACTCTCCAGTGGTAGTATCGAGCAACTCTGTTGTTGGAGTGTATTCATCTTCCACAGATCCTGTTCATGTGCCATCTCCTGATTCCAGACCAGCTGCTTCTGTTGGTGCTATTAAACGAGAAGTTGGTATTAGGAGGCAAGCTTCTGGCAACTCCAAGCCCTCTGCTCCAGGTAGCTCTGTGACTTCTGTCTCAAATTCACTCTTGGGAAAAGAGGGTTCTACTGAGTCATTTCGACCTTTCACTGGAATCTCTAAAGCTGATCAAGTGAGCCAAACTTCTGAGTCTGTGATACCTAGCATGTCGGGCAGCAGACCGTTGTTAAGTAATCAGCACAACGTCAGGCCACACCCACCACCTGTGGGACATCAGAAAGGGTGCTTTTGGTCTTCCCAGACTAATAAGGAGTGGAAACCTAAATCAAGCCAAAAGCCAAGTTCTAACAGTCCTGGAGTCATTGGAACACCAACAAAGTCTATTTCACCTGCTTCTGGTGATTCTAAGGTTTCAGAGTCAGAAGCAGCTAAGTTGCAAGATAAGCTCGCATTAGTAAATGTATATGATAACTGTAATGTTGTCATAGCAGAGAGTATTAGGGTCCCAGACAGTGATCGTTTTCAATTAACGTTTGGAAGCTTGGGGACAGAGCTTGATTCAACAGGGAATATAGTTAATGGATTTCAAGCTGGAGATACAGAGGAGTCAAACAGGGAAGCTGCAGCAAGTTTGTCAGTATCAGCTCCAGAGTTGTGCAGTGATGAGGCTTCTGGCATCAAGCCGGTGGATTTATTAGATCACCAAGTTAGAAGTTCTGGCTCTGAATCCCCAGTATCAGGTGCAGTTGCTGAGCATCAATTGCCTGAGAAAAAAGAAACTTCTAGTCCCCAGAATTTGGGCAATTATGCAGATATTGGTTTGGTTCAAGACAACAGTTCATCCTATGCACCTTCCGATTCACAGCAGCAAGATCCATCAGAGTTACAAGGTTTTTCGGCATTTGATTCTCAGACTGGTTATGACATACCTTATTTCAGACCAAATATGGAGGAAAGCCGTGGACATCCTCCTCAAGAGGCCTTGAGCTCTCATACCGTCAACAGCATGGCTGCATCAACAGTTGCCATGGTGCAACAGCAACCACCCCCAGTGGCACAGATGTACCCACAAGTTCATGTTTCACATTATGCTAATCTCATGCCATATCGCCAATTTCTCTCACCAGTTTATGTTCCACCAATGGCTGTTCCTGGCTATTCTAACAACCCTGCATATCCTCACCTGTCTAATGGCAACAGCTACTTGCTGATGCCTGGAGGCGGTTCGCACCTAAATGCAAACAGCCTCAAGTATGGAGTGCAGCAGTTTAAGCCTGTCCCTGCTGGAAGTCCGACAGGGTTTGGGAATTTTACTAATCCCAACGGATATGCAATCAACGCCCCTGGTGTTGGAGGTGCCGCTGGGCTAGAAGATTCATCTCGAATCAAGTACAAAGATGGCAATCTATACGTCCCAAATCCTCAGGCTGAGACATCAGAGATTTGGATTCAGAATGCAAGGGAGCACCCGGGCATGCAATCCACCCCGTACTACAACATGCCTGCGCAAACGCCGCACGGTGCTTATATGCCATCTCACGGTGCTCATGCTTCCTTCAATGCAGCTGCAGCTCAATCTTCTCACATGCAGTTCCCAGGTTTGTACCATCCTCCTCAGCCCAGTGCAATTCCGAACCCGCACCATATGGGCCCTGCTATGGGCGGTAATGTCGGTGTTGGGGTTGGCGCAGCTGCTCCTGGGGCACAAGTTGGTGCATATCAGCAACCCCAACTGAACCACCTGAATTGGCAATCGAACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1296

Protein Analysis

878

Amino Acids

93.6

Weight (kDa)

8.37

Isoelectric Point (pI)

52.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 14 - 73 6.2e-29 GBF-interacting protein 1 N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1267
Acc16I TGCGCA 1 cut(s) 2376
Acc36I ACCTGC 2 cut(s) 232, 1267
AccB1I GGYRCC 1 cut(s) 2225
AccB7I CCANNNNNTGG 1 cut(s) 1666
AccII CGCG 1 cut(s) 16
AciI CCGC 6 cut(s) 153, 2091, 2229, 2384, 2507, 2532
AclI AACGTT 1 cut(s) 1400
AclWI GGATC 4 cut(s) 134, 147, 827, 1736
AcsI RAATTY 5 cut(s) 458, 619, 970, 1663, 2176
AfaI GTAC 5 cut(s) 532, 1934, 2261, 2360, 2474
AjnI CCWGG 7 cut(s) 943, 1222, 2020, 2083, 2212, 2464, 2566
AjuI GAANNNNNNNTTGG 4 cut(s) 165, 197, 718, 750
AleI CACNNNNGTG 1 cut(s) 526
Alw21I GWGCWC 3 cut(s) 1859, 2337, 2416
Alw26I GTCTC 7 cut(s) 198, 256, 468, 630, 689, 970, 2294
AlwI GGATC 4 cut(s) 134, 147, 827, 1736
AlwNI CAGNNNCTG 2 cut(s) 836, 1619
Ama87I CYCGRG 2 cut(s) 738, 2338
AoxI GGCC 5 cut(s) 280, 574, 1118, 1848, 2518
ApaI GGGCCC 1 cut(s) 2522
ApoI RAATTY 5 cut(s) 458, 619, 970, 1663, 2176
AspLEI GCGC 2 cut(s) 2377, 2558
AspS9I GGNCC 5 cut(s) 287, 574, 1372, 2518, 2519
AsuC2I CCSGG 5 cut(s) 10, 739, 740, 2339, 2340
AsuHPI GGTGA 5 cut(s) 1248, 1280, 1562, 1983, 2042
AvaI CYCGRG 2 cut(s) 738, 2338
AvaII GGWCC 2 cut(s) 287, 1372
AxyI CCTNAGG 1 cut(s) 2292
BaeGI GKGCMC 2 cut(s) 2522, 2575
BaeI ACNNNNGTAYC 2 cut(s) 1916, 1949
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 2225
BanII GRGCYC 3 cut(s) 121, 1859, 2522
BauI CACGAG 1 cut(s) 429
BbsI GAAGAC 1 cut(s) 1155
Bbv12I GWGCWC 3 cut(s) 1859, 2337, 2416
BbvCI CCTCAGC 1 cut(s) 2484
BccI CCATC 6 cut(s) 613, 856, 1753, 2261, 2410, 2484
BceAI ACGGC 1 cut(s) 1812
BciT130I CCWGG 7 cut(s) 945, 1224, 2022, 2085, 2214, 2466, 2568
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 5 cut(s) 10, 739, 740, 2339, 2340
BcoDI GTCTC 7 cut(s) 198, 256, 468, 630, 689, 970, 2294
BfaI CTAG 4 cut(s) 609, 1071, 1653, 2237
BfmI CTRYAG 3 cut(s) 524, 1491, 2436
BfuAI ACCTGC 2 cut(s) 232, 1267
BlpI GCTNAGC 1 cut(s) 1620
Bme18I GGWCC 2 cut(s) 287, 1372
BmeT110I CYCGRG 2 cut(s) 738, 2338
BmgT120I GGNCC 5 cut(s) 287, 574, 1372, 2518, 2519
BmiI GGNNCC 7 cut(s) 141, 246, 289, 1373, 1374, 2227, 2520
BmrI ACTGGG 3 cut(s) 1595, 1913, 2484
BmsI GCATC 5 cut(s) 244, 1554, 1633, 1892, 2070
BmuI ACTGGG 3 cut(s) 1595, 1913, 2484
BoxI GACNNNNGTC 1 cut(s) 962
BpiI GAAGAC 1 cut(s) 1155
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 6 cut(s) 765, 927, 1245, 1482, 1500, 2106
Bpu10I CCTNAGC 1 cut(s) 2484
Bpu1102I GCTNAGC 1 cut(s) 1620
BpuEI CTTGAG 3 cut(s) 1827, 1873, 2102
BpuMI CCSGG 5 cut(s) 10, 739, 740, 2339, 2340
BsaBI GATNNNNATC 1 cut(s) 2271
BsaJI CCNNGG 8 cut(s) 283, 738, 1828, 1896, 2212, 2338, 2464, 2567
Bse118I RCCGGY 1 cut(s) 1552
Bse1I ACTGG 9 cut(s) 448, 682, 782, 1024, 1601, 1789, 1919, 1994, 2490
Bse21I CCTNAGG 1 cut(s) 2292
Bse8I GATNNNNATC 1 cut(s) 2271
BseBI CCWGG 7 cut(s) 945, 1224, 2022, 2085, 2214, 2466, 2568
BseDI CCNNGG 8 cut(s) 283, 738, 1828, 1896, 2212, 2338, 2464, 2567
BseGI GGATG 5 cut(s) 259, 302, 1709, 1834, 2476
BseJI GATNNNNATC 1 cut(s) 2271
BseNI ACTGG 9 cut(s) 448, 682, 782, 1024, 1601, 1789, 1919, 1994, 2490
BseRI GAGGAG 4 cut(s) 432, 1487, 1830, 2472
BseSI GKGCMC 2 cut(s) 2522, 2575
BseYI CCCAGC 2 cut(s) 749, 2231
BsgI GTGCAG 4 cut(s) 297, 1546, 1632, 2150
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 5 cut(s) 282, 576, 1120, 1850, 2520
BshNI GGYRCC 1 cut(s) 2225
BsiHKAI GWGCWC 3 cut(s) 1859, 2337, 2416
BsiHKCI CYCGRG 2 cut(s) 738, 2338
BsiSI CCGG 4 cut(s) 9, 739, 1553, 2339
BslFI GGGAC 9 cut(s) 43, 300, 360, 1152, 1358, 1429, 1641, 2132, 2267
BsmAI GTCTC 7 cut(s) 198, 256, 468, 630, 689, 970, 2294
BsmBI CGTCTC 1 cut(s) 630
BsmFI GGGAC 9 cut(s) 43, 300, 360, 1152, 1358, 1429, 1641, 2132, 2267
BsmI GAATGC 1 cut(s) 2329
BsnI GGCC 5 cut(s) 282, 576, 1120, 1850, 2520
BsoBI CYCGRG 2 cut(s) 738, 2338
Bsp120I GGGCCC 1 cut(s) 2518
Bsp1286I GDGCHC 6 cut(s) 121, 1859, 2337, 2416, 2522, 2575
Bsp1407I TGTACA 1 cut(s) 530
Bsp1720I GCTNAGC 1 cut(s) 1620
Bsp19I CCATGG 1 cut(s) 1896
Bsp68I TCGCGA 1 cut(s) 16
BspACI CCGC 6 cut(s) 153, 2091, 2229, 2384, 2507, 2532
BspANI GGCC 5 cut(s) 282, 576, 1120, 1850, 2520
BspFNI CGCG 1 cut(s) 16
BspLI GGNNCC 7 cut(s) 141, 246, 289, 1373, 1374, 2227, 2520
BspMAI CTGCAG 2 cut(s) 1495, 2440
BspMI ACCTGC 2 cut(s) 232, 1267
BspPI GGATC 4 cut(s) 134, 147, 827, 1736
BspT107I GGYRCC 1 cut(s) 2225
BsrFI RCCGGY 1 cut(s) 1552
BsrGI TGTACA 1 cut(s) 530
BsrI ACTGG 9 cut(s) 448, 682, 782, 1024, 1601, 1789, 1919, 1994, 2490
BssAI RCCGGY 1 cut(s) 1552
BssECI CCNNGG 8 cut(s) 283, 738, 1828, 1896, 2212, 2338, 2464, 2567
BssSI CACGAG 1 cut(s) 429
BssT1I CCWWGG 2 cut(s) 283, 1896
Bst2BI CACGAG 1 cut(s) 429
Bst2UI CCWGG 7 cut(s) 945, 1224, 2022, 2085, 2214, 2466, 2568
Bst6I CTCTTC 3 cut(s) 188, 409, 726
BstAPI GCANNNNNTGC 1 cut(s) 1630
BstAUI TGTACA 1 cut(s) 530
BstC8I GCNNGC 8 cut(s) 280, 516, 552, 747, 915, 1317, 2345, 2373
BstDSI CCRYGG 2 cut(s) 1828, 1896
BstF5I GGATG 5 cut(s) 259, 302, 1709, 1834, 2476
BstFNI CGCG 1 cut(s) 16
BstHHI GCGC 2 cut(s) 2377, 2558
BstMAI GTCTC 7 cut(s) 198, 256, 468, 630, 689, 970, 2294
BstMWI GCNNNNNNNGC 8 cut(s) 1080, 1312, 1630, 2140, 2207, 2383, 2438, 2570
BstNI CCWGG 7 cut(s) 945, 1224, 2022, 2085, 2214, 2466, 2568
BstNSI RCATGY 4 cut(s) 1078, 2347, 2371, 2458
BstPAI GACNNNNGTC 1 cut(s) 962
BstSFI CTRYAG 3 cut(s) 524, 1491, 2436
BstSLI GKGCMC 2 cut(s) 2522, 2575
BstUI CGCG 1 cut(s) 16
BstV2I GAAGAC 1 cut(s) 1155
BstX2I RGATCY 3 cut(s) 139, 832, 1741
BstYI RGATCY 3 cut(s) 139, 832, 1741
Bsu36I CCTNAGG 1 cut(s) 2292
BsuRI GGCC 5 cut(s) 282, 576, 1120, 1850, 2520
BtgI CCRYGG 2 cut(s) 1828, 1896
BtsCI GGATG 5 cut(s) 259, 302, 1709, 1834, 2476
BtsI GCAGTG 2 cut(s) 667, 1534
BtsIMutI CAGTG 8 cut(s) 533, 667, 789, 1017, 1387, 1534, 1926, 2497
BtuMI TCGCGA 1 cut(s) 16
BveI ACCTGC 2 cut(s) 232, 1267
Cac8I GCNNGC 8 cut(s) 280, 516, 552, 747, 915, 1317, 2345, 2373
CaiI CAGNNNCTG 2 cut(s) 836, 1619
CfoI GCGC 2 cut(s) 2377, 2558
Cfr10I RCCGGY 1 cut(s) 1552
Cfr13I GGNCC 5 cut(s) 287, 574, 1372, 2518, 2519
Cfr9I CCCGGG 2 cut(s) 738, 2338
CseI GACGC 1 cut(s) 543
Csp6I GTAC 5 cut(s) 531, 1933, 2260, 2359, 2473
CspCI CAANNNNNGTGG 2 cut(s) 2597, 2632
CviQI GTAC 5 cut(s) 531, 1933, 2260, 2359, 2473
Eam1104I CTCTTC 3 cut(s) 188, 409, 726
EarI CTCTTC 3 cut(s) 188, 409, 726
Ecl136II GAGCTC 1 cut(s) 1857
Eco130I CCWWGG 2 cut(s) 283, 1896
Eco147I AGGCCT 1 cut(s) 1850
Eco24I GRGCYC 3 cut(s) 121, 1859, 2522
Eco32I GATATC 1 cut(s) 109
Eco47I GGWCC 2 cut(s) 287, 1372
Eco53kI GAGCTC 1 cut(s) 1857
Eco81I CCTNAGG 1 cut(s) 2292
Eco88I CYCGRG 2 cut(s) 738, 2338
EcoICRI GAGCTC 1 cut(s) 1857
EcoO109I RGGNCCY 3 cut(s) 287, 1372, 2519
EcoRI GAATTC 1 cut(s) 458
EcoRII CCWGG 7 cut(s) 943, 1222, 2020, 2083, 2212, 2464, 2566
EcoRV GATATC 1 cut(s) 109
EcoT14I CCWWGG 2 cut(s) 283, 1896
EcoT38I GRGCYC 3 cut(s) 121, 1859, 2522
ErhI CCWWGG 2 cut(s) 283, 1896
Esp3I CGTCTC 1 cut(s) 630
FaqI GGGAC 9 cut(s) 43, 300, 360, 1152, 1358, 1429, 1641, 2132, 2267
FauI CCCGC 1 cut(s) 2514
FauNDI CATATG 1 cut(s) 2514
FbaI TGATCA 1 cut(s) 1036
FokI GGATG 5 cut(s) 266, 289, 1696, 1821, 2463
FriOI GRGCYC 3 cut(s) 121, 1859, 2522
FspBI CTAG 4 cut(s) 609, 1071, 1653, 2237
FspI TGCGCA 1 cut(s) 2376
GlaI GCGC 2 cut(s) 2376, 2557
GsaI CCCAGC 2 cut(s) 753, 2235
GsuI CTGGAG 6 cut(s) 765, 927, 1245, 1482, 1500, 2106
HaeIII GGCC 5 cut(s) 282, 576, 1120, 1850, 2520
HapII CCGG 4 cut(s) 9, 739, 1553, 2339
HgaI GACGC 1 cut(s) 543
HhaI GCGC 2 cut(s) 2377, 2558
Hin6I GCGC 2 cut(s) 2375, 2556
HinP1I GCGC 2 cut(s) 2375, 2556
HincII GTYRAC 1 cut(s) 1870
HindII GTYRAC 1 cut(s) 1870
HindIII AAGCTT 2 cut(s) 915, 1408
HpaII CCGG 4 cut(s) 9, 739, 1553, 2339
HphI GGTGA 5 cut(s) 1248, 1280, 1562, 1983, 2042
Hpy166II GTNNAC 3 cut(s) 531, 1832, 1870
Hpy188III TCNNGA 7 cut(s) 15, 854, 861, 1517, 1697, 1844, 2250
Hpy8I GTNNAC 3 cut(s) 531, 1832, 1870
HpyAV CCTTC 6 cut(s) 17, 208, 330, 357, 1731, 2434
HpyCH4IV ACGT 3 cut(s) 1113, 1400, 2280
HpyF10VI GCNNNNNNNGC 8 cut(s) 1080, 1312, 1630, 2140, 2207, 2383, 2438, 2570
HpySE526I ACGT 3 cut(s) 1113, 1400, 2280
HspAI GCGC 2 cut(s) 2375, 2556
KflI GGGWCCC 1 cut(s) 1372
Ksp22I TGATCA 1 cut(s) 1036
LmnI GCTCC 4 cut(s) 946, 1519, 2332, 2569
LweI GCATC 5 cut(s) 244, 1554, 1633, 1892, 2070
MaeI CTAG 4 cut(s) 609, 1071, 1653, 2237
MaeII ACGT 3 cut(s) 1113, 1400, 2280
MaeIII GTNAC 3 cut(s) 715, 955, 1752
MboII GAAGA 7 cut(s) 205, 426, 713, 816, 1155, 2252, 2439
MfeI CAATTG 2 cut(s) 726, 1628
MflI RGATCY 3 cut(s) 139, 832, 1741
MhlI GDGCHC 6 cut(s) 121, 1859, 2337, 2416, 2522, 2575
MlyI GAGTC 8 cut(s) 25, 604, 723, 1010, 1067, 1236, 1295, 1484
MmeI TCCRAC 3 cut(s) 790, 2186, 2200
MseI TTAA 7 cut(s) 75, 486, 888, 1097, 1397, 1446, 2139
MslI CAYNNNNRTG 2 cut(s) 526, 2103
MspA1I CMGCKG 4 cut(s) 869, 2231, 2435, 2561
MspI CCGG 4 cut(s) 9, 739, 1553, 2339
MunI CAATTG 2 cut(s) 726, 1628
Mva1269I GAATGC 1 cut(s) 2329
MvaI CCWGG 7 cut(s) 945, 1224, 2022, 2085, 2214, 2466, 2568
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 8 cut(s) 1080, 1312, 1630, 2140, 2207, 2383, 2438, 2570
NciI CCSGG 5 cut(s) 10, 739, 740, 2339, 2340
NcoI CCATGG 1 cut(s) 1896
NdeI CATATG 1 cut(s) 2514
NlaIV GGNNCC 7 cut(s) 141, 246, 289, 1373, 1374, 2227, 2520
NmuCI GTSAC 2 cut(s) 715, 955
NruI TCGCGA 1 cut(s) 16
NsbI TGCGCA 1 cut(s) 2376
NspI RCATGY 4 cut(s) 1078, 2347, 2371, 2458
OliI CACNNNNGTG 1 cut(s) 526
PaeI GCATGC 1 cut(s) 2347
PaqCI CACCTGC 1 cut(s) 1267
PceI AGGCCT 1 cut(s) 1850
PctI GAATGC 1 cut(s) 2329
PflMI CCANNNNNTGG 1 cut(s) 1666
PfoI TCCNGGA 1 cut(s) 1222
PleI GAGTC 8 cut(s) 25, 603, 722, 1009, 1066, 1235, 1294, 1483
PpsI GAGTC 8 cut(s) 25, 603, 722, 1009, 1066, 1235, 1294, 1483
PpuMI RGGWCCY 2 cut(s) 287, 1372
PshAI GACNNNNGTC 1 cut(s) 962
Psp124BI GAGCTC 1 cut(s) 1859
Psp1406I AACGTT 1 cut(s) 1400
Psp5II RGGWCCY 2 cut(s) 287, 1372
Psp6I CCWGG 7 cut(s) 943, 1222, 2020, 2083, 2212, 2464, 2566
PspFI CCCAGC 2 cut(s) 749, 2231
PspGI CCWGG 7 cut(s) 943, 1222, 2020, 2083, 2212, 2464, 2566
PspN4I GGNNCC 7 cut(s) 141, 246, 289, 1373, 1374, 2227, 2520
PspOMI GGGCCC 1 cut(s) 2518
PspPI GGNCC 5 cut(s) 287, 574, 1372, 2518, 2519
PspPPI RGGWCCY 2 cut(s) 287, 1372
PstI CTGCAG 2 cut(s) 1495, 2440
PstNI CAGNNNCTG 2 cut(s) 836, 1619
PsuI RGATCY 3 cut(s) 139, 832, 1741
PvuII CAGCTG 3 cut(s) 869, 2435, 2561
RruI TCGCGA 1 cut(s) 16
RsaI GTAC 5 cut(s) 532, 1934, 2261, 2360, 2474
RsaNI GTAC 5 cut(s) 531, 1933, 2260, 2359, 2473
RseI CAYNNNNRTG 2 cut(s) 526, 2103
SacI GAGCTC 1 cut(s) 1859
SaqAI TTAA 7 cut(s) 75, 486, 888, 1097, 1397, 1446, 2139
Sau96I GGNCC 5 cut(s) 287, 574, 1372, 2518, 2519
SchI GAGTC 8 cut(s) 25, 604, 723, 1010, 1067, 1236, 1295, 1484
SduI GDGCHC 6 cut(s) 121, 1859, 2337, 2416, 2522, 2575
SfaNI GCATC 5 cut(s) 244, 1554, 1633, 1892, 2070
SfcI CTRYAG 3 cut(s) 524, 1491, 2436
SinI GGWCC 2 cut(s) 287, 1372
SmaI CCCGGG 2 cut(s) 740, 2340
SmiMI CAYNNNNRTG 2 cut(s) 526, 2103
SmlI CTYRAG 3 cut(s) 1842, 1852, 2117
SmoI CTYRAG 3 cut(s) 1842, 1852, 2117
SphI GCATGC 1 cut(s) 2347
SseBI AGGCCT 1 cut(s) 1850
SsiI CCGC 6 cut(s) 153, 2091, 2229, 2384, 2507, 2532
SspMI CTAG 4 cut(s) 609, 1071, 1653, 2237
SstI GAGCTC 1 cut(s) 1859
StuI AGGCCT 1 cut(s) 1850
StyI CCWWGG 2 cut(s) 283, 1896
TaiI ACGT 3 cut(s) 1116, 1403, 2283
TaqI TCGA 5 cut(s) 21, 794, 1009, 2251, 2624
TatI WGTACW 2 cut(s) 530, 2259
TauI GCSGC 2 cut(s) 2231, 2386
Tru1I TTAA 7 cut(s) 75, 486, 888, 1097, 1397, 1446, 2139
Tru9I TTAA 7 cut(s) 75, 486, 888, 1097, 1397, 1446, 2139
TscAI CASTG 8 cut(s) 533, 667, 789, 1024, 1387, 1534, 1926, 2497
TseFI GTSAC 2 cut(s) 715, 955
Tsp45I GTSAC 2 cut(s) 715, 955
TspDTI ATGAA 9 cut(s) 162, 173, 339, 524, 810, 830, 1698, 1934, 2235
TspGWI ACGGA 2 cut(s) 452, 2208
TspMI CCCGGG 2 cut(s) 738, 2338
TspRI CASTG 8 cut(s) 533, 667, 789, 1024, 1387, 1534, 1926, 2497
Van91I CCANNNNNTGG 1 cut(s) 1666
VpaK11BI GGWCC 2 cut(s) 287, 1372
XapI RAATTY 5 cut(s) 458, 619, 970, 1663, 2176
XceI RCATGY 4 cut(s) 1078, 2347, 2371, 2458
XmaI CCCGGG 2 cut(s) 738, 2338
XspI CTAG 4 cut(s) 609, 1071, 1653, 2237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.