FvH4_6g37420
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0011195
Physical Location & Seq
Reverse (-)
29438816 .. 29445423
6608 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g37420.t1

Sequence Viewer

Length: 3333 bp
ATGCAGCTTTCATTGTGCCATTTCCTGTTCTTGTTCTTGTGCTTCTCTGTTTCCATAACCACTATAACTAGTTTGAACTCTGATGGACTTGCTTTACTGTCCCTCTTAAACCGCTGGACTTTTGTTCCCACACCCATTTCTTCAAGCTGGAATCTTTCTGATTCCACACCATGTAAATGGGTAGGAATAGAATGTGACACTGCCCAAAATGTGTTTGCCTTGAATGTCTCTAGTTATGGAATTTCTGGTCTGTTAGGACCTGAAATTGGGAACTTGAGTCTCTTACAGATTCTTGTTTTGAGTGTCAATAGTTTTTCGGGTCAAATTCCAATGGAGTTGGCCAATTGTAGTCTTCTTGAGACCTTGGACTTGTCTGGAAATGGTTTCACTGGGAAGTTACCTGATAACTTGCACAAGTTGAAGAATCTACAGTACTTAGGCTTGTATGATAATTTTCTGGATGGGCAGATTCCTGAGTCCTTGTTTACAATTCCAAAATTGGCCTTTGTTTATCTATACAATAACAGTTTGAATGGTTCAATTCCTGGAAGTATAGGTTCATTGAGTCATTTGAGTGAGCTTGTGCATTTGTATTTGGACTATAATGAATTGTCCGGAGGGATTCCTTCATCCATTGGGAATTGTAGTAAATTGGAGGAATTGACTTTGAGTTACAACCAGTTGAGTGGAGTATTGCCCGAGAGTCTGAACAACCTTAAGAACCTGTCGTATGTACTAGTCAGTAAGAACAGTCTTGAGGGTACCATTTCTTTTGGTTCAGAAAATTGCAAGAAATTGTTTTTCTTGGATCTGTCATACAATAAGTTTAGGGGAAGTCTTCCATCAGCCCTTGGCAATTGTACTGGTTTAATGTCTTTTATGGCCATAAGTAACAACTTGGTTGGTTCAATACCTTCTTCTTTTGGCCTACTAGATAAGCTAGAACTCTTGTACCTTCCTGTGAATCAGCTGTCTGGAAGAATACCTCCAGAACTCGGTCAGTGCAAGTCGTTGACCGGACTACAATTGAATATGAACCAACTAGTTGGAGAAATTCCTGATGAGTTGGGAATGTTGGACAACCTGCAAGACCTTCGATTATCCCAAAACAACTTAACTGGTGAAGTTCCAGTTAGCATATGGAAGATTCAAACTCTTCAATATGTCCATCTCTACATGAATAACCTCACTGGGGAACTGCCTTTAGAGATGACTGAACTCAAGCAACTGAAAAACATCTCATTGTTTAACAACCAGTTTTATGGAGTTATACCTCAAGCTTTGGGGATTAACAGCAGTCTAGAGCTGGTAGATTTTATGTATAATATGTTCACCGGTAGCATCCCTCCAAATCTTTGCTTTGGAAAGCAGCTAATGGTATTGGTTATGGGGTTCAATCAACTTCAAGGTACCATACCTTCTGATGTCGGAGGTTGTTCAACTCTTTCGAGGTTGAGACTCGAACAGAATAACCTGACCGGAGTTCTCCCACAATTTGTGAAAAATTCTGAGCTTTCATATATGGACATCAGCAGCAATGAGATTACTGGAGAAATTCCATCAAGCTTGGGAAACTGTAGCAACCTCACCACTATCATCTTGTCCATGAACAAGTTGACAGGAGTCATACCAGAGGAGCTTGGTTACCTTGCAGATCTTCAAACTTTGGATCTTTCCGACAACAATTTGGTGGGTGCTTTGCCTTCTAGCCTATCCAATTGTACCAAAATGGAGCATTTCAATGTGGCATCCAACTTCTTGAATGGCTCCATTCCTTCCAGTTTGAGTAGTTGGACAGGTTTATCTGAATTGGTATTAAGTGATAACAAGTTTACTGGCGGCATTCCACCATTCTTGTCAGAATTTGAAATGCTTTCAGAGCTAAATCTTGGTGGAAATTTGTTGGGAGGTGTGATTCCATCATCAGTTGGAGCACTGCAGAATTTGTTTTATGCCCTGAACCTTAGCAATAATGCATTGACAGGTTTGGTTCCTTCAGAGCTTGGAAAGTTGATAATGCTACAGAGGCTAGATTTATCTCAAAACAAATTGACAGGGACTTTGAGTGCTCTTGATGGCATGAAATCATTAATTGAGGTTAATGTTTCATACAATAACTTCACAGGTGCAGTACCACAAAGACTGATGAACCTGTTGAACTCATCCAGATTTTCCTTTTCCAGCAATCCCTCTCTATGTGTCAGTTATCTTCCATCATGTGGCTTAACTTGTGCTGGAAACTACACTATTAGGCTCTGCAAAAGTCAATCAAGCAAGCAGAAAGGACTTAGCAAAATGGGAATTGCATTTATAGCCCTCGGATCATCGATACTTGCTGTTTCTCTGCTGTATCTACTGGTGTATTTGTTTTGCTTGAGAAGAAGGACTAAGCAGGAAGTTGGGGTCTCAGCCCGAGAGGGACCATCTTCCTTACTCACCAAAGTCATGGAGGCTACAGAGGATCTAAATGATAGATATATCATTGGGAGAGGAAGTCATGGAACTGTTTATAGGGCTTCTTTGGATGAAGACAAGGATTTTGCTGTCAAGAAGCTTGTATTTGCCGGGCATGCCGGAAGGCGTTTGAGCATGATTAGAGAACTTCAAACCCTTGGGAAGATCAAGCACCGGAATCTGGTCAAATTAGAAGACTTCTGGTTAAGAAAGGACTATGGCTTAATCTTGTATAGGTACATGCAAAATGGAAGCCTTCATGATGTCTTACACGAAATTAGTCCCCGGTTAATTCTGGAGTGGAGTATGCGCTACAATATAGCACTGGGAACTGCATATGGCTTGGAATATCTCCATTATGATTGTGATCCTCCTATAGTGCATCGAGATATCAAGCCAATGAACATTCTGTTAGACTCAGAGATGGAAGCTCACATTGCTGATTTTGGTATTGCTAAACTCTTAGATCAGTCAACTCCTTCAATGGTGTCTATCTCAGTTGTTGGTACAACCGGATATATCGCACCAGAGAATGCATTCAGAACAGCAAACAGTGTGGAGTCTGATGTGTACAGTTATGGGGTTGTTTTACTTGAGCTGATAACTAGAAAGAAGGCATTGGATCCATCTTTTATGGAGCAATCTGATATTGTAGGATGGGTTAGATCAGTGTGGAGGGATACAGAAAGAATTGATAGGATTGTCGATTCAAGCCTTGTGGAGGAACTTCTGGACTCAAATATCAGGAACCAGATTGTTGATGTGCTTCTGTTGGCTCTCAGCTGTACTCATGATGATCCTAAAAAGCGACCCACGATGAGAGATGTTATCAAGATATTATTAGAGATAAATTCCCCAATGAGGAGCACATTGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004888 GO:0005488 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009975 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019199 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030054 GO:0033218 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0042221 GO:0042277 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044464 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052652 GO:0055044 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:0098542 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1111

Amino Acids

122.18

Weight (kDa)

5.32

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 25 - 66 1e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 193 - 252 2e-06 Leucine rich repeat
LRR_8 PF13855 504 - 563 1.1e-08 Leucine rich repeat
LRR_8 PF13855 625 - 684 3.8e-06 Leucine rich repeat
Pkinase PF00069 827 - 1096 1.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 827 - 1097 3.4e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011195)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73080
fragaria_vesca FvH4_6g37420 FvH4_6g37430
malus_domestica MD09G1158300.v1.1 MD17G1144300.v1.1
prunus_persica Prupe.3G167800_v2.0.a1 Prupe.3G167800_v2.0.a1 Prupe.3G167900_v2.0.a1
pyrus_communis pycom09g07690 pycom17g13740
rosa_chinensis RchiOBHm_Chr2g0150241
rosa_laevigata RLG00000020481
rosa_multiflora Rmu_ssc0000020.1_g000002
rosa_roxburghii Rroxscaffold_2G00097340
rosa_rugosa Rorug02G0420100
rosa_samantha Rh2AG479100 Rh2BG491400 Rh2CG465300 Rh2DG500200
rosa_wichuraiana Rw2G039090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1092
Acc65I GGTACC 2 cut(s) 761, 1409
AccB1I GGYRCC 2 cut(s) 761, 1409
AccB7I CCANNNNNTGG 1 cut(s) 2219
AccIII TCCGGA 1 cut(s) 614
AciI CCGC 2 cut(s) 112, 1839
AclWI GGATC 8 cut(s) 816, 1677, 2329, 2469, 2816, 3071, 3084, 3245
AcoI YGGCCR 2 cut(s) 339, 882
AcsI RAATTY 9 cut(s) 240, 324, 1053, 1504, 1554, 1862, 1897, 1942, 3304
AcuI CTGAAG 1 cut(s) 1980
AfiI CCNNNNNNNGG 7 cut(s) 266, 995, 1192, 2219, 2635, 3175, 3315
AflII CTTAAG 1 cut(s) 716
AgeI ACCGGT 1 cut(s) 1334
AhlI ACTAGT 3 cut(s) 68, 736, 1042
AjnI CCWGG 1 cut(s) 544
Alw21I GWGCWC 3 cut(s) 1936, 2071, 3323
Alw26I GTCTC 5 cut(s) 232, 284, 353, 1450, 2410
AlwI GGATC 8 cut(s) 816, 1677, 2329, 2469, 2816, 3071, 3084, 3245
Ama87I CYCGRG 2 cut(s) 698, 2412
Aor13HI TCCGGA 1 cut(s) 614
AoxI GGCC 4 cut(s) 339, 501, 882, 925
ApeKI GCWGC 3 cut(s) 4, 1369, 1533
ApoI RAATTY 9 cut(s) 240, 324, 1053, 1504, 1554, 1862, 1897, 1942, 3304
ArsI GACNNNNNNTTYG 4 cut(s) 2044, 2076, 2522, 2554
AseI ATTAAT 1 cut(s) 2090
AsiGI ACCGGT 1 cut(s) 1334
Asp700I GAANNNNTTC 1 cut(s) 2990
Asp718I GGTACC 2 cut(s) 761, 1409
AspLEI GCGC 1 cut(s) 2766
AspS9I GGNCC 2 cut(s) 257, 2420
AsuC2I CCSGG 2 cut(s) 2566, 2740
AsuHPI GGTGA 4 cut(s) 1133, 1324, 1579, 2428
AvaI CYCGRG 2 cut(s) 698, 2412
AvaII GGWCC 2 cut(s) 257, 2420
BaeI ACNNNNGTAYC 2 cut(s) 935, 968
BalI TGGCCA 2 cut(s) 341, 884
BamHI GGATCC 1 cut(s) 3076
BanI GGYRCC 2 cut(s) 761, 1409
BarI GAAGNNNNNNTAC 2 cut(s) 1402, 1434
BbsI GAAGAC 4 cut(s) 344, 830, 2535, 2655
Bbv12I GWGCWC 3 cut(s) 1936, 2071, 3323
BbvI GCAGC 3 cut(s) 16, 1381, 1545
BcgI CGANNNNNNTGC 2 cut(s) 1076, 1110
BciT130I CCWGG 1 cut(s) 546
BciVI GTATCC 1 cut(s) 3127
BcnI CCSGG 2 cut(s) 2566, 2740
BcoDI GTCTC 5 cut(s) 232, 284, 353, 1450, 2410
BcuI ACTAGT 3 cut(s) 68, 736, 1042
BfmI CTRYAG 6 cut(s) 428, 1576, 1937, 2021, 2454, 2829
BfrI CTTAAG 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 1092
BfuI GTATCC 1 cut(s) 3127
BglII AGATCT 1 cut(s) 1654
BisI GCNGC 4 cut(s) 5, 1370, 1534, 1840
BlsI GCNGC 4 cut(s) 6, 1371, 1535, 1841
BmcAI AGTACT 1 cut(s) 434
Bme1390I CCNGG 3 cut(s) 546, 2566, 2740
Bme18I GGWCC 2 cut(s) 257, 2420
BmeT110I CYCGRG 2 cut(s) 698, 2412
BmgT120I GGNCC 2 cut(s) 257, 2420
BmiI GGNNCC 7 cut(s) 763, 1411, 1768, 1992, 2421, 3078, 3203
BmrFI CCNGG 3 cut(s) 546, 2566, 2740
BmrI ACTGGG 3 cut(s) 399, 1200, 2789
BmsI GCATC 3 cut(s) 1350, 1757, 2845
BmuI ACTGGG 3 cut(s) 399, 1200, 2789
BoxI GACNNNNGTC 1 cut(s) 1622
BpiI GAAGAC 4 cut(s) 344, 830, 2535, 2655
BpmI CTGGAG 3 cut(s) 972, 1569, 2771
Bpu10I CCTNAGC 1 cut(s) 1964
BpuEI CTTGAG 7 cut(s) 295, 377, 776, 1205, 1260, 2395, 3068
BpuMI CCSGG 2 cut(s) 2566, 2740
Bsa29I ATCGAT 1 cut(s) 2327
BsaBI GATNNNNATC 1 cut(s) 2820
BsaI GGTCTC 2 cut(s) 353, 2410
BsaJI CCNNGG 5 cut(s) 363, 850, 2317, 2611, 2738
BsaWI WCCGGW 6 cut(s) 614, 1016, 1334, 1478, 2628, 2966
BsaXI ACNNNNNCTCC 2 cut(s) 2479, 2509
Bsc4I CCNNNNNNNGG 7 cut(s) 266, 995, 1192, 2219, 2635, 3175, 3315
Bse118I RCCGGY 1 cut(s) 1334
Bse3DI GCAATG 2 cut(s) 1543, 2889
Bse8I GATNNNNATC 1 cut(s) 2820
BseAI TCCGGA 1 cut(s) 614
BseBI CCWGG 1 cut(s) 546
BseCI ATCGAT 1 cut(s) 2327
BseDI CCNNGG 5 cut(s) 363, 850, 2317, 2611, 2738
BseGI GGATG 7 cut(s) 466, 629, 1341, 1748, 2162, 2530, 3116
BseJI GATNNNNATC 1 cut(s) 2820
BseLI CCNNNNNNNGG 7 cut(s) 266, 995, 1192, 2219, 2635, 3175, 3315
BseMI GCAATG 2 cut(s) 1543, 2889
BseMII CTCAG 6 cut(s) 465, 1500, 2421, 2886, 2964, 3247
BseRI GAGGAG 2 cut(s) 1649, 3331
BseXI GCAGC 3 cut(s) 16, 1381, 1545
BsgI GTGCAG 1 cut(s) 2148
BshFI GGCC 4 cut(s) 341, 503, 884, 927
BshNI GGYRCC 2 cut(s) 761, 1409
BshTI ACCGGT 1 cut(s) 1334
BshVI ATCGAT 1 cut(s) 2327
BsiHKAI GWGCWC 3 cut(s) 1936, 2071, 3323
BsiHKCI CYCGRG 2 cut(s) 698, 2412
BsiSI CCGG 9 cut(s) 615, 1017, 1335, 1479, 2565, 2574, 2629, 2740, 2967
BslFI GGGAC 4 cut(s) 85, 2071, 2433, 2721
BslI CCNNNNNNNGG 7 cut(s) 266, 995, 1192, 2219, 2635, 3175, 3315
BsmAI GTCTC 5 cut(s) 232, 284, 353, 1450, 2410
BsmFI GGGAC 4 cut(s) 85, 2071, 2433, 2721
BsmI GAATGC 3 cut(s) 1842, 2990, 2992
BsnI GGCC 4 cut(s) 341, 503, 884, 927
Bso31I GGTCTC 2 cut(s) 353, 2410
BsoBI CYCGRG 2 cut(s) 698, 2412
Bsp1286I GDGCHC 3 cut(s) 1936, 2071, 3323
Bsp13I TCCGGA 1 cut(s) 614
Bsp1407I TGTACA 1 cut(s) 3024
BspACI CCGC 2 cut(s) 112, 1839
BspANI GGCC 4 cut(s) 341, 503, 884, 927
BspCNI CTCAG 6 cut(s) 466, 1501, 2420, 2885, 2963, 3246
BspDI ATCGAT 1 cut(s) 2327
BspEI TCCGGA 1 cut(s) 614
BspHI TCATGA 2 cut(s) 2713, 3244
BspLI GGNNCC 7 cut(s) 763, 1411, 1768, 1992, 2421, 3078, 3203
BspMAI CTGCAG 1 cut(s) 1941
BspMI ACCTGC 1 cut(s) 1092
BspPI GGATC 8 cut(s) 816, 1677, 2329, 2469, 2816, 3071, 3084, 3245
BspT107I GGYRCC 2 cut(s) 761, 1409
BspTI CTTAAG 1 cut(s) 716
BspTNI GGTCTC 2 cut(s) 353, 2410
BsrDI GCAATG 2 cut(s) 1543, 2889
BsrFI RCCGGY 1 cut(s) 1334
BsrGI TGTACA 1 cut(s) 3024
BssAI RCCGGY 1 cut(s) 1334
BssECI CCNNGG 5 cut(s) 363, 850, 2317, 2611, 2738
BssT1I CCWWGG 3 cut(s) 363, 850, 2611
Bst2UI CCWGG 1 cut(s) 546
Bst4CI ACNGT 8 cut(s) 99, 432, 527, 752, 1577, 2506, 3008, 3029
Bst6I CTCTTC 1 cut(s) 1161
BstAFI CTTAAG 1 cut(s) 716
BstAUI TGTACA 1 cut(s) 3024
BstC8I GCNNGC 2 cut(s) 2276, 2571
BstEII GGTNACC 1 cut(s) 1643
BstENI CCTNNNNNAGG 1 cut(s) 3173
BstF5I GGATG 7 cut(s) 466, 629, 1341, 1748, 2162, 2530, 3116
BstHHI GCGC 1 cut(s) 2766
BstMAI GTCTC 5 cut(s) 232, 284, 353, 1450, 2410
BstMWI GCNNNNNNNGC 5 cut(s) 1879, 2026, 2312, 2570, 2891
BstNI CCWGG 1 cut(s) 546
BstNSI RCATGY 2 cut(s) 2573, 2698
BstPAI GACNNNNGTC 1 cut(s) 1622
BstPI GGTNACC 1 cut(s) 1643
BstSCI CCNGG 3 cut(s) 544, 2564, 2738
BstSFI CTRYAG 6 cut(s) 428, 1576, 1937, 2021, 2454, 2829
BstV1I GCAGC 3 cut(s) 16, 1381, 1545
BstV2I GAAGAC 4 cut(s) 344, 830, 2535, 2655
BstX2I RGATCY 5 cut(s) 808, 1654, 1669, 2461, 3076
BstXI CCANNNNNNTGG 5 cut(s) 177, 686, 1046, 1262, 2446
BstYI RGATCY 5 cut(s) 808, 1654, 1669, 2461, 3076
Bsu15I ATCGAT 1 cut(s) 2327
BsuI GTATCC 1 cut(s) 3127
BsuRI GGCC 4 cut(s) 341, 503, 884, 927
BsuTUI ATCGAT 1 cut(s) 2327
BtsCI GGATG 7 cut(s) 466, 629, 1341, 1748, 2162, 2530, 3116
BtsI GCAGTG 2 cut(s) 198, 1934
BtsIMutI CAGTG 8 cut(s) 198, 387, 1007, 1188, 1934, 2777, 3013, 3129
BveI ACCTGC 1 cut(s) 1092
Cac8I GCNNGC 2 cut(s) 2276, 2571
CciI TCATGA 2 cut(s) 2713, 3244
CfoI GCGC 1 cut(s) 2766
Cfr10I RCCGGY 1 cut(s) 1334
Cfr13I GGNCC 2 cut(s) 257, 2420
ClaI ATCGAT 1 cut(s) 2327
CspAI ACCGGT 1 cut(s) 1334
CspCI CAANNNNNGTGG 6 cut(s) 1836, 1871, 2991, 3026, 3153, 3188
EaeI YGGCCR 2 cut(s) 339, 882
Eam1104I CTCTTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 1161
Eco130I CCWWGG 3 cut(s) 363, 850, 2611
Eco31I GGTCTC 2 cut(s) 353, 2410
Eco32I GATATC 1 cut(s) 2845
Eco47I GGWCC 2 cut(s) 257, 2420
Eco57I CTGAAG 1 cut(s) 1980
Eco88I CYCGRG 2 cut(s) 698, 2412
Eco91I GGTNACC 1 cut(s) 1643
EcoNI CCTNNNNNAGG 1 cut(s) 3173
EcoO109I RGGNCCY 1 cut(s) 257
EcoO65I GGTNACC 1 cut(s) 1643
EcoRII CCWGG 1 cut(s) 544
EcoRV GATATC 1 cut(s) 2845
EcoT14I CCWWGG 3 cut(s) 363, 850, 2611
EcoT22I ATGCAT 2 cut(s) 1978, 2992
ErhI CCWWGG 3 cut(s) 363, 850, 2611
FaqI GGGAC 4 cut(s) 85, 2071, 2433, 2721
FauNDI CATATG 2 cut(s) 1139, 2791
Fnu4HI GCNGC 4 cut(s) 5, 1370, 1534, 1840
FokI GGATG 7 cut(s) 473, 616, 1328, 1735, 2149, 2537, 3123
Fsp4HI GCNGC 4 cut(s) 5, 1370, 1534, 1840
GlaI GCGC 1 cut(s) 2765
GluI GCNGC 4 cut(s) 5, 1370, 1534, 1840
GsuI CTGGAG 3 cut(s) 972, 1569, 2771
HaeIII GGCC 4 cut(s) 341, 503, 884, 927
HapII CCGG 9 cut(s) 615, 1017, 1335, 1479, 2565, 2574, 2629, 2740, 2967
HhaI GCGC 1 cut(s) 2766
Hin6I GCGC 1 cut(s) 2764
HinP1I GCGC 1 cut(s) 2764
HincII GTYRAC 3 cut(s) 1014, 1617, 2928
HindII GTYRAC 3 cut(s) 1014, 1617, 2928
HindIII AAGCTT 3 cut(s) 1278, 1564, 2552
HpaII CCGG 9 cut(s) 615, 1017, 1335, 1479, 2565, 2574, 2629, 2740, 2967
HphI GGTGA 4 cut(s) 1133, 1324, 1579, 2428
Hpy166II GTNNAC 7 cut(s) 486, 1014, 1332, 1617, 1833, 2928, 3025
Hpy8I GTNNAC 7 cut(s) 486, 1014, 1332, 1617, 1833, 2928, 3025
HpyCH4III ACNGT 8 cut(s) 99, 432, 527, 752, 1577, 2506, 3008, 3029
HpyF10VI GCNNNNNNNGC 5 cut(s) 1879, 2026, 2312, 2570, 2891
HspAI GCGC 1 cut(s) 2764
Kpn2I TCCGGA 1 cut(s) 614
KpnI GGTACC 2 cut(s) 765, 1413
LmnI GCTCC 6 cut(s) 1636, 1732, 1772, 1931, 3091, 3318
Lsp1109I GCAGC 3 cut(s) 16, 1381, 1545
LweI GCATC 3 cut(s) 1350, 1757, 2845
MaeIII GTNAC 5 cut(s) 194, 396, 671, 890, 1643
MfeI CAATTG 4 cut(s) 343, 856, 1025, 1717
MflI RGATCY 5 cut(s) 808, 1654, 1669, 2461, 3076
MhlI GDGCHC 3 cut(s) 1936, 2071, 3323
MlsI TGGCCA 2 cut(s) 341, 884
MluNI TGGCCA 2 cut(s) 341, 884
MlyI GAGTC 9 cut(s) 286, 485, 574, 712, 1452, 1632, 2864, 3023, 3182
MmeI TCCRAC 7 cut(s) 1027, 1056, 1408, 1701, 1772, 1776, 1909
Mox20I TGGCCA 2 cut(s) 341, 884
Mph1103I ATGCAT 2 cut(s) 1978, 2992
MroI TCCGGA 1 cut(s) 614
MroXI GAANNNNTTC 1 cut(s) 2990
MscI TGGCCA 2 cut(s) 341, 884
MslI CAYNNNNRTG 3 cut(s) 175, 573, 1740
Msp20I TGGCCA 2 cut(s) 341, 884
MspA1I CMGCKG 3 cut(s) 114, 970, 3237
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 9 cut(s) 615, 1017, 1335, 1479, 2565, 2574, 2629, 2740, 2967
MspR9I CCNGG 3 cut(s) 546, 2566, 2740
MunI CAATTG 4 cut(s) 343, 856, 1025, 1717
Mva1269I GAATGC 3 cut(s) 1842, 2990, 2992
MvaI CCWGG 1 cut(s) 546
MwoI GCNNNNNNNGC 5 cut(s) 1879, 2026, 2312, 2570, 2891
NciI CCSGG 2 cut(s) 2566, 2740
NdeI CATATG 2 cut(s) 1139, 2791
NlaIV GGNNCC 7 cut(s) 763, 1411, 1768, 1992, 2421, 3078, 3203
NmuCI GTSAC 1 cut(s) 194
NsiI ATGCAT 2 cut(s) 1978, 2992
NspI RCATGY 2 cut(s) 2573, 2698
PaeI GCATGC 1 cut(s) 2573
PagI TCATGA 2 cut(s) 2713, 3244
PctI GAATGC 3 cut(s) 1842, 2990, 2992
PdmI GAANNNNTTC 1 cut(s) 2990
PflMI CCANNNNNTGG 1 cut(s) 2219
PfoI TCCNGGA 1 cut(s) 544
PinAI ACCGGT 1 cut(s) 1334
PkrI GCNGC 4 cut(s) 6, 1371, 1535, 1841
PleI GAGTC 9 cut(s) 285, 484, 573, 711, 1452, 1631, 2864, 3022, 3182
PpsI GAGTC 9 cut(s) 285, 484, 573, 711, 1452, 1631, 2864, 3022, 3182
PpuMI RGGWCCY 1 cut(s) 257
PshAI GACNNNNGTC 1 cut(s) 1622
PshBI ATTAAT 1 cut(s) 2090
Psp5II RGGWCCY 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 544
PspEI GGTNACC 1 cut(s) 1643
PspGI CCWGG 1 cut(s) 544
PspN4I GGNNCC 7 cut(s) 763, 1411, 1768, 1992, 2421, 3078, 3203
PspPI GGNCC 2 cut(s) 257, 2420
PspPPI RGGWCCY 1 cut(s) 257
PsrI GAACNNNNNNTAC 2 cut(s) 1313, 1345
PstI CTGCAG 1 cut(s) 1941
PsuI RGATCY 5 cut(s) 808, 1654, 1669, 2461, 3076
PvuII CAGCTG 2 cut(s) 970, 3237
RseI CAYNNNNRTG 3 cut(s) 175, 573, 1740
SatI GCNGC 4 cut(s) 5, 1370, 1534, 1840
Sau96I GGNCC 2 cut(s) 257, 2420
ScaI AGTACT 1 cut(s) 434
SchI GAGTC 9 cut(s) 286, 485, 574, 712, 1452, 1632, 2864, 3023, 3182
ScrFI CCNGG 3 cut(s) 546, 2566, 2740
SduI GDGCHC 3 cut(s) 1936, 2071, 3323
SfaNI GCATC 3 cut(s) 1350, 1757, 2845
SfcI CTRYAG 6 cut(s) 428, 1576, 1937, 2021, 2454, 2829
SinI GGWCC 2 cut(s) 257, 2420
SmiMI CAYNNNNRTG 3 cut(s) 175, 573, 1740
SmlI CTYRAG 8 cut(s) 274, 356, 716, 755, 1220, 1275, 2374, 3047
SmoI CTYRAG 8 cut(s) 274, 356, 716, 755, 1220, 1275, 2374, 3047
SpeI ACTAGT 3 cut(s) 68, 736, 1042
SphI GCATGC 1 cut(s) 2573
SsiI CCGC 2 cut(s) 112, 1839
StyD4I CCNGG 3 cut(s) 544, 2564, 2738
StyI CCWWGG 3 cut(s) 363, 850, 2611
TaaI ACNGT 8 cut(s) 99, 432, 527, 752, 1577, 2506, 3008, 3029
TaqI TCGA 6 cut(s) 1096, 1448, 1461, 2327, 2839, 3159
TaqII GACCGA 1 cut(s) 986
TatI WGTACW 5 cut(s) 432, 733, 860, 3024, 3239
TauI GCSGC 1 cut(s) 1842
TscAI CASTG 8 cut(s) 205, 394, 1007, 1195, 1941, 2784, 3013, 3129
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 3 cut(s) 4, 1369, 1533
Tsp45I GTSAC 1 cut(s) 194
TspRI CASTG 8 cut(s) 205, 394, 1007, 1195, 1941, 2784, 3013, 3129
Van91I CCANNNNNTGG 1 cut(s) 2219
Vha464I CTTAAG 1 cut(s) 716
VpaK11BI GGWCC 2 cut(s) 257, 2420
VspI ATTAAT 1 cut(s) 2090
XagI CCTNNNNNAGG 1 cut(s) 3173
XapI RAATTY 9 cut(s) 240, 324, 1053, 1504, 1554, 1862, 1897, 1942, 3304
XbaI TCTAGA 1 cut(s) 1300
XceI RCATGY 2 cut(s) 2573, 2698
XcmI CCANNNNNNNNNTGG 1 cut(s) 1137
XmnI GAANNNNTTC 1 cut(s) 2990
ZrmI AGTACT 1 cut(s) 434
Zsp2I ATGCAT 2 cut(s) 1978, 2992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.