Prupe.3G167900_v2.0.a1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0011195
Physical Location & Seq
Reverse (-)
18691353 .. 18695566
4214 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G167900.1

Sequence Viewer

Length: 3273 bp
ATGCAGCTTTATCTGTTCAATTTTTTGTTGTTGTTGTGCTTGTCTGTGTCCATATCCACTGTATCTAGTTTGAACTCTGATGGGGTGGCTTTGTTGTCACTCTCCAAGCATTGGACCTCTGTCCCTGCTTCCATATCCTCAAGCTGGAATGCTTCTGATTCCACTCCATGCCAATGGGTTGGGATAGAATGTGACAATGACCACAATGTGGTTTCCCTGAAGCTCACTGGTTATGGAATTTCTGGTCAATTGGGACCTGAAATTAGCAGATTTAGGTACTTGAAGATTCTTGATTTGAGTGTTAACAAATTTTCTGGCAAAATTCCAACAGAATTGGCCAATTGTAGTCTTCTTGAAAACTTGGACTTGTATGAAAATGGCTTTTCTGGTGAAATTCCTGAATCCTTCTTTGCAATTCCTGCCTTAGCTTATGTGCATCTGTATAGTAACCGTTTGAATGGTTCCATCCCTGGAAATGTTGGGAATCTGAGTGAGCTTGTGCATCTGGATTTATATGAGAATCAGTTTTCAGGAGTCATTCCTTCATCCGTTGGAAACTGTAGTAAATTGGAGGACTTGTATTTGGCTGAGAACCAGTTGATAGGAGAACTTCCTAAGAGTCTGAACAAGCTTGAGAACCTGGTATATCTAGATGTGGCTAACAATAGTCTTGAGGGTAGCATTCCCTTGGGTTCAGGTACTTGCAAGAATTTAATTTACTTGGATTTTTCATACAATAAGTTTAGTGGAGGTATTCCACCAGGACTTGGAAATTGTAGTAATTTAACACAATTTTCTGCTGTGGGTAGCAATTTAGAGGGGACTATTCCATCTTCCTTTGGCCAACTCAAGTACCTTTCCATCCTGTACCTTCCTCTAAATCATTTGTCTGGTAAAATACCTCCTGAACTTGGCAAGTGTGAATCCTTGAAGGAACTACACTTGTATACAAACCAACTAGTGGGAGAAATTCCTGGTGAATTGGGGATGCTGACTCAATTACAGGACCTTAAATTATTTGAGAATCGGTTAACTGGTGAAATTCCAGTTAGCATATGGAAGATTCAAAGTCTTCAGCATATCCTTGTGTACAATAATAGCCTCACCGGGGAACTGCCTGTAGTGATGACTGAGTTGAAGCAGCTAAAAAATATATCATTGTTCAACAACCTGTTTTTTGGAGTTATACCTCAAACTTTGGGGATTAACAGCAGTTTGTGGCTGTTAGATTTTACCAATAATAAGTTCACTGGTAAAATCCCTCCAAGTCTTTGCCGTGGAAAGCAGTTATGGAAGTTGAATATGGGTTTCAATCGAATTCAAGGTACCATTCCTTCTGATGTTGGAAATTGCTCTAGTCTAAGCAGGTTGAAACTGGGACACAATAACCTCACTGGGGTTCTACCACAGTTTGCAAAAAATTCAAGACTTTTATATATGGACATCAGCAACAATGAGATTAGTGGAGAAATCCCATCTATCTTGGGAAATTGTAGCAATCTCACAACCATCAATTTGTCCATAAACAAGTTAACAGGAGGTATACCCCAGGAGCTAGGGAATCTTGAAGAGCTTCGTTCTTTGATTCTTTTCAAGAACAATTTGGTTGGTCCTCTACCTCCTCAGCTTTCAAAGTGTACCAAAATGGATAAGTTTGACGTGGGATCAAATTTGTTGAATGGTTCCATTCCATCGAGTTTGAGAAGTTGGACAGATTTATCAACACTGATTTTAAGTGACAATAGTTTTACTGGAGAAATTCCACGTTTCTTCACAGAGTTTGAAAAACTTATAGAGCTACGACTTGGTGGAAATTTGTTTGCAGGTGCGATTCCCTCATCAATCGGAGCATTGGTTAGTCTATCATATGCATTGAATCTTAGCAATAATGCATTGACAGGTCGGATTCCTTCAGAGCTTGGGAAGTTGACAAGCCTACAACAACTCGATCTATCTCATAACAATTTGACAGGGACTTTAAAAGCTCTTGATCATATGATTTCATTGACTGAGGTGGATGTTTCAGACAATAACTTCACAGGTTCAGTACCAGAGACGTTTATGAAGCTGTTGAACTCATCATCATTATCATTTTTGGGCAATCCCTACCTATGTGTCAGTTACCTTCCATTATGTGGCTCAACTTGTGGAAGAAACAACAGTTTTAAGCTGTGCAACCGTCAATTAAGCAATCATAAAGGCCTTAGTAAAGTAGAAATTGCATTTACAGCCCTGGGGTCTTCATTATTCGTTGTTTTTGTGCTTTATGGACTGGTTTATATGTTCCTCTTACGCAAAAAGACCAAGCAGGAACTTGAGGTCTCTGCTCAAGACAGGCTGTCTTCCCTACTCAAGGAAGTAATGGAGGCCACAGAAAATCTTAATGATCAATATATCATTGGGAAAGGAGCCCATGGAACTGTCTATAAGGCCTTTTTGGCTCCAGACAAAGATTATGCCGTCAAGAAGCTTGTATTTGCAGGGCATGAAGGAACGCGTTCAAGCATGGTTAGAGAAATTCAAACCCTGGGGACGATAAGGCATCGAAATCTAGTTAAATTGGAAGACTTCTGGTTGAGAAAGGACCATGGTTTAATCTTGTACAGGTACATGGAAAATGGGAGCCTTCATGATGCTCTACATGAAATTAAACCCCCACCAACTCTTGAGTGGATTGTCCGCTACAGGATAGCACTTGGAACTGCATACGGTTTGGAGTATCTCCATTTTGATTGTGACCCCCGTATAGTTCATCGAGATGTAAAACCAATGAACATTCTCTTAGACTCTGATATGGAGCCTCATGTCGCTGATTTTGGTATTGCTAAACTTTTGGATCAGTCTTCTGCATCAACGGCGTCCGCTGCAGTTGTGGGTACAACTGGATATATTGCACCAGAAAATGCATCTAGACCATCAACGAGTGTGGAATCTGATGTGTACAGTTATGGGGTTGTTTTACTTGAGCTGATAACTAGGAAGAAGGCATTGGATCCAGCATTTGGGGAGCAAACTGACATTGTAGGATGGGCTAGGTCAGCGTGGAGCAACACAGAAGACATTGATCAGATCGTTGATTCAAGCCTTAAGGAGGAACTCCCGCATTCAAATATAATCGACCAAGTTGTGGATGTGCTTATGGTGGCTTTCAGATGTACTGATAAAAATCCTAGAAAGAGACCGACGATGAGAGATGTTATCCAGCAATTATTAGATGCAAATCCCCAAGTGAGAAAAAGAAGGATATTGAATCCTCGTAATGGTTTGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001653 GO:0002376 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004888 GO:0005488 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0005911 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009719 GO:0009725 GO:0009753 GO:0009975 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019199 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030054 GO:0033218 GO:0034641 GO:0034654 GO:0036211 GO:0038023 GO:0042221 GO:0042277 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044464 GO:0045087 GO:0046068 GO:0046390 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052652 GO:0055044 GO:0055086 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:0098542 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1091

Amino Acids

120.2

Weight (kDa)

6.14

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011195)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73080
fragaria_vesca FvH4_6g37420 FvH4_6g37430
malus_domestica MD09G1158300.v1.1 MD17G1144300.v1.1
prunus_persica Prupe.3G167800_v2.0.a1 Prupe.3G167800_v2.0.a1 Prupe.3G167900_v2.0.a1
pyrus_communis pycom09g07690 pycom17g13740
rosa_chinensis RchiOBHm_Chr2g0150241
rosa_laevigata RLG00000020481
rosa_multiflora Rmu_ssc0000020.1_g000002
rosa_roxburghii Rroxscaffold_2G00097340
rosa_rugosa Rorug02G0420100
rosa_samantha Rh2AG479100 Rh2BG491400 Rh2CG465300 Rh2DG500200
rosa_wichuraiana Rw2G039090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1814
Acc36I ACCTGC 2 cut(s) 1356, 1814
Acc65I GGTACC 1 cut(s) 1325
AccB1I GGYRCC 1 cut(s) 1325
AccB7I CCANNNNNTGG 7 cut(s) 111, 208, 767, 961, 2135, 3002, 3127
AccI GTMKAC 2 cut(s) 947, 1543
AccII CGCG 1 cut(s) 2497
AciI CCGC 3 cut(s) 2680, 2862, 3101
AclWI GGATC 4 cut(s) 1672, 2844, 2987, 3000
AcoI YGGCCR 2 cut(s) 336, 841
AcuI CTGAAG 3 cut(s) 239, 1058, 1896
AcyI GRCGYC 1 cut(s) 2858
AdeI CACNNNGTG 1 cut(s) 208
AflII CTTAAG 1 cut(s) 3086
AflIII ACRYGT 1 cut(s) 2495
AhdI GACNNNNNGTC 1 cut(s) 2338
AhlI ACTAGT 1 cut(s) 958
AjiI CACGTC 1 cut(s) 1660
AjnI CCWGG 7 cut(s) 469, 639, 760, 973, 1548, 2232, 2526
AjuI GAANNNNNNNTTGG 4 cut(s) 1229, 1261, 2972, 3004
Alw26I GTCTC 3 cut(s) 2048, 2326, 3172
AlwI GGATC 4 cut(s) 1672, 2844, 2987, 3000
AoxI GGCC 5 cut(s) 336, 841, 2200, 2367, 2430
ApeKI GCWGC 3 cut(s) 4, 1141, 2864
Asp700I GAANNNNTTC 2 cut(s) 1572, 2497
Asp718I GGTACC 1 cut(s) 1325
AspS9I GGNCC 5 cut(s) 114, 254, 1006, 1610, 2584
AsuC2I CCSGG 1 cut(s) 1108
AsuHPI GGTGA 4 cut(s) 401, 989, 1049, 1096
AvaII GGWCC 5 cut(s) 114, 254, 1006, 1610, 2584
BaeI ACNNNNGTAYC 2 cut(s) 836, 869
BalI TGGCCA 2 cut(s) 338, 843
BamHI GGATCC 1 cut(s) 2992
BanI GGYRCC 1 cut(s) 1325
BanII GRGCYC 1 cut(s) 2413
BarI GAAGNNNNNNTAC 2 cut(s) 1318, 1350
BbsI GAAGAC 7 cut(s) 341, 1064, 2232, 2334, 2571, 2835, 3063
BbvCI CCTCAGC 1 cut(s) 1623
BbvI GCAGC 3 cut(s) 16, 1153, 2851
BccI CCATC 9 cut(s) 74, 473, 838, 869, 1483, 1517, 1699, 2923, 3021
BceAI ACGGC 3 cut(s) 1260, 2444, 2871
BciT130I CCWGG 7 cut(s) 471, 641, 762, 975, 1550, 2234, 2528
BclI TGATCA 3 cut(s) 1990, 2386, 3064
BcnI CCSGG 1 cut(s) 1108
BcoDI GTCTC 3 cut(s) 2048, 2326, 3172
BcuI ACTAGT 1 cut(s) 958
BfmI CTRYAG 4 cut(s) 559, 1119, 2683, 2865
BfrI CTTAAG 1 cut(s) 3086
BfuAI ACCTGC 2 cut(s) 1356, 1814
BglI GCCNNNNNGGC 1 cut(s) 2438
BisI GCNGC 3 cut(s) 5, 1142, 2865
BlsI GCNGC 3 cut(s) 6, 1143, 2866
Bme1390I CCNGG 8 cut(s) 471, 641, 762, 975, 1108, 1550, 2234, 2528
Bme18I GGWCC 5 cut(s) 114, 254, 1006, 1610, 2584
BmeRI GACNNNNNGTC 1 cut(s) 2338
BmgBI CACGTC 1 cut(s) 1660
BmgT120I GGNCC 5 cut(s) 114, 254, 1006, 1610, 2584
BmiI GGNNCC 9 cut(s) 255, 463, 1327, 1684, 2410, 2442, 2624, 2799, 2994
BmrFI CCNGG 8 cut(s) 471, 641, 762, 975, 1108, 1550, 2234, 2528
BmrI ACTGGG 2 cut(s) 1385, 1404
BmsI GCATC 8 cut(s) 445, 511, 978, 2551, 2623, 2858, 2915, 3205
BmuI ACTGGG 2 cut(s) 1385, 1404
BoxI GACNNNNGTC 1 cut(s) 119
BpiI GAAGAC 7 cut(s) 341, 1064, 2232, 2334, 2571, 2835, 3063
BpmI CTGGAG 2 cut(s) 1773, 2427
Bpu10I CCTNAGC 2 cut(s) 424, 1623
BpuEI CTTGAG 9 cut(s) 124, 653, 692, 833, 2313, 2336, 2336, 2687, 2984
BpuMI CCSGG 1 cut(s) 1108
BsaBI GATNNNNATC 2 cut(s) 3165, 3219
BsaHI GRCGYC 1 cut(s) 2858
BsaI GGTCTC 2 cut(s) 2326, 3172
BsaXI ACNNNNNCTCC 4 cut(s) 563, 593, 1839, 1869
Bse8I GATNNNNATC 2 cut(s) 3165, 3219
BseBI CCWGG 7 cut(s) 471, 641, 762, 975, 1550, 2234, 2528
BseGI GGATG 7 cut(s) 465, 545, 861, 993, 2023, 3032, 3136
BseJI GATNNNNATC 2 cut(s) 3165, 3219
BseMII CTCAG 5 cut(s) 479, 579, 1122, 1637, 2001
BseRI GAGGAG 1 cut(s) 1611
BseXI GCAGC 3 cut(s) 16, 1153, 2851
Bsh1236I CGCG 1 cut(s) 2497
BshFI GGCC 5 cut(s) 338, 843, 2202, 2369, 2432
BshNI GGYRCC 1 cut(s) 1325
BsiSI CCGG 1 cut(s) 1107
BslFI GGGAC 6 cut(s) 107, 267, 835, 1392, 1987, 2545
BsmAI GTCTC 3 cut(s) 2048, 2326, 3172
BsmBI CGTCTC 1 cut(s) 2048
BsmFI GGGAC 6 cut(s) 107, 267, 835, 1392, 1987, 2545
BsmI GAATGC 3 cut(s) 154, 681, 3103
BsnI GGCC 5 cut(s) 338, 843, 2202, 2369, 2432
Bso31I GGTCTC 2 cut(s) 2326, 3172
Bsp1286I GDGCHC 1 cut(s) 2413
Bsp1407I TGTACA 3 cut(s) 1089, 2601, 2940
Bsp143I GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
Bsp19I CCATGG 2 cut(s) 2413, 2587
BspACI CCGC 3 cut(s) 2680, 2862, 3101
BspANI GGCC 5 cut(s) 338, 843, 2202, 2369, 2432
BspCNI CTCAG 5 cut(s) 480, 580, 1123, 1636, 2002
BspFNI CGCG 1 cut(s) 2497
BspHI TCATGA 1 cut(s) 2629
BspLI GGNNCC 9 cut(s) 255, 463, 1327, 1684, 2410, 2442, 2624, 2799, 2994
BspMAI CTGCAG 1 cut(s) 2869
BspMI ACCTGC 2 cut(s) 1356, 1814
BspPI GGATC 4 cut(s) 1672, 2844, 2987, 3000
BspQI GCTCTTC 1 cut(s) 1563
BspT107I GGYRCC 1 cut(s) 1325
BspTI CTTAAG 1 cut(s) 3086
BspTNI GGTCTC 2 cut(s) 2326, 3172
BsrGI TGTACA 3 cut(s) 1089, 2601, 2940
BssMI GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
BssNAI GTATAC 2 cut(s) 948, 1544
BssNI GRCGYC 1 cut(s) 2858
BssT1I CCWWGG 3 cut(s) 687, 2413, 2587
Bst1107I GTATAC 2 cut(s) 948, 1544
Bst2UI CCWGG 7 cut(s) 471, 641, 762, 975, 1550, 2234, 2528
Bst4CI ACNGT 9 cut(s) 61, 452, 560, 1410, 2162, 2180, 2422, 2711, 2945
Bst6I CTCTTC 1 cut(s) 1563
BstACI GRCGYC 1 cut(s) 2858
BstAFI CTTAAG 1 cut(s) 3086
BstAPI GCANNNNNTGC 1 cut(s) 419
BstAUI TGTACA 3 cut(s) 1089, 2601, 2940
BstDSI CCRYGG 3 cut(s) 1276, 2413, 2587
BstENI CCTNNNNNAGG 2 cut(s) 2351, 3089
BstF5I GGATG 7 cut(s) 465, 545, 861, 993, 2023, 3032, 3136
BstFNI CGCG 1 cut(s) 2497
BstKTI GATC 8 cut(s) 1667, 1951, 1993, 2389, 2839, 2995, 3067, 3072
BstMAI GTCTC 3 cut(s) 2048, 2326, 3172
BstMBI GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
BstMWI GCNNNNNNNGC 6 cut(s) 419, 2228, 2438, 2855, 2864, 3038
BstNI CCWGG 7 cut(s) 471, 641, 762, 975, 1550, 2234, 2528
BstPAI GACNNNNGTC 1 cut(s) 119
BstSCI CCNGG 8 cut(s) 469, 639, 760, 973, 1106, 1548, 2232, 2526
BstSFI CTRYAG 4 cut(s) 559, 1119, 2683, 2865
BstUI CGCG 1 cut(s) 2497
BstV1I GCAGC 3 cut(s) 16, 1153, 2851
BstV2I GAAGAC 7 cut(s) 341, 1064, 2232, 2334, 2571, 2835, 3063
BstX2I RGATCY 1 cut(s) 2992
BstXI CCANNNNNNTGG 2 cut(s) 174, 179
BstYI RGATCY 1 cut(s) 2992
BstZ17I GTATAC 2 cut(s) 948, 1544
BsuRI GGCC 5 cut(s) 338, 843, 2202, 2369, 2432
BtgI CCRYGG 3 cut(s) 1276, 2413, 2587
BtrI CACGTC 1 cut(s) 1660
BtsCI GGATG 7 cut(s) 465, 545, 861, 993, 2023, 3032, 3136
BtsIMutI CAGTG 5 cut(s) 57, 225, 1248, 1392, 1724
BveI ACCTGC 2 cut(s) 1356, 1814
CciI TCATGA 1 cut(s) 2629
Cfr13I GGNCC 5 cut(s) 114, 254, 1006, 1610, 2584
CseI GACGC 1 cut(s) 2847
CsiI ACCWGGT 1 cut(s) 639
CspCI CAANNNNNGTGG 2 cut(s) 2907, 2942
CviAII CATG 9 cut(s) 168, 2414, 2486, 2506, 2588, 2611, 2630, 2642, 2804
DpnI GATC 8 cut(s) 1666, 1950, 1992, 2388, 2838, 2994, 3066, 3071
DpnII GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
DraI TTTAAA 1 cut(s) 1980
DraIII CACNNNGTG 1 cut(s) 208
DriI GACNNNNNGTC 1 cut(s) 2338
EaeI YGGCCR 2 cut(s) 336, 841
Eam1104I CTCTTC 1 cut(s) 1563
Eam1105I GACNNNNNGTC 1 cut(s) 2338
EarI CTCTTC 1 cut(s) 1563
Eco130I CCWWGG 3 cut(s) 687, 2413, 2587
Eco147I AGGCCT 2 cut(s) 2202, 2432
Eco24I GRGCYC 1 cut(s) 2413
Eco31I GGTCTC 2 cut(s) 2326, 3172
Eco47I GGWCC 5 cut(s) 114, 254, 1006, 1610, 2584
Eco57I CTGAAG 3 cut(s) 239, 1058, 1896
EcoNI CCTNNNNNAGG 2 cut(s) 2351, 3089
EcoO109I RGGNCCY 2 cut(s) 254, 1006
EcoRI GAATTC 1 cut(s) 1317
EcoRII CCWGG 7 cut(s) 469, 639, 760, 973, 1548, 2232, 2526
EcoT14I CCWWGG 3 cut(s) 687, 2413, 2587
EcoT22I ATGCAT 3 cut(s) 1873, 1894, 2908
EcoT38I GRGCYC 1 cut(s) 2413
ErhI CCWWGG 3 cut(s) 687, 2413, 2587
Esp3I CGTCTC 1 cut(s) 2048
FaeI CATG 9 cut(s) 171, 2417, 2489, 2509, 2591, 2614, 2633, 2645, 2807
FaqI GGGAC 6 cut(s) 107, 267, 835, 1392, 1987, 2545
FatI CATG 9 cut(s) 167, 2413, 2485, 2505, 2587, 2610, 2629, 2641, 2803
FauI CCCGC 1 cut(s) 3108
FauNDI CATATG 3 cut(s) 1055, 1867, 1995
FbaI TGATCA 3 cut(s) 1990, 2386, 3064
FblI GTMKAC 2 cut(s) 947, 1543
Fnu4HI GCNGC 3 cut(s) 5, 1142, 2865
FokI GGATG 7 cut(s) 452, 532, 848, 1000, 2030, 3039, 3143
FriOI GRGCYC 1 cut(s) 2413
Fsp4HI GCNGC 3 cut(s) 5, 1142, 2865
GluI GCNGC 3 cut(s) 5, 1142, 2865
GsuI CTGGAG 2 cut(s) 1773, 2427
HaeIII GGCC 5 cut(s) 338, 843, 2202, 2369, 2432
HapII CCGG 1 cut(s) 1107
HgaI GACGC 1 cut(s) 2847
Hin1I GRCGYC 1 cut(s) 2858
Hin1II CATG 9 cut(s) 171, 2417, 2489, 2509, 2591, 2614, 2633, 2645, 2807
HincII GTYRAC 4 cut(s) 304, 1032, 1533, 1929
HindII GTYRAC 4 cut(s) 304, 1032, 1533, 1929
HindIII AAGCTT 2 cut(s) 629, 2468
HpaI GTTAAC 3 cut(s) 304, 1032, 1533
HpaII CCGG 1 cut(s) 1107
HphI GGTGA 4 cut(s) 401, 989, 1049, 1096
Hpy99I CGWCG 1 cut(s) 3187
HpyCH4III ACNGT 9 cut(s) 61, 452, 560, 1410, 2162, 2180, 2422, 2711, 2945
HpyCH4IV ACGT 3 cut(s) 1659, 1765, 2057
HpyF10VI GCNNNNNNNGC 6 cut(s) 419, 2228, 2438, 2855, 2864, 3038
HpySE526I ACGT 3 cut(s) 1659, 1765, 2057
Hsp92I GRCGYC 1 cut(s) 2858
Hsp92II CATG 9 cut(s) 171, 2417, 2489, 2509, 2591, 2614, 2633, 2645, 2807
KpnI GGTACC 1 cut(s) 1329
Ksp22I TGATCA 3 cut(s) 1990, 2386, 3064
KspAI GTTAAC 3 cut(s) 304, 1032, 1533
Kzo9I GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
LguI GCTCTTC 1 cut(s) 1563
LmnI GCTCC 8 cut(s) 1552, 1847, 2408, 2446, 2622, 2797, 3007, 3045
Lsp1109I GCAGC 3 cut(s) 16, 1153, 2851
LweI GCATC 8 cut(s) 445, 511, 978, 2551, 2623, 2858, 2915, 3205
MabI ACCWGGT 1 cut(s) 639
MaeII ACGT 3 cut(s) 1659, 1765, 2057
MaeIII GTNAC 6 cut(s) 96, 191, 446, 1736, 2120, 2735
MalI GATC 8 cut(s) 1666, 1950, 1992, 2388, 2838, 2994, 3066, 3071
MboI GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
MfeI CAATTG 2 cut(s) 248, 340
MflI RGATCY 1 cut(s) 2992
MhlI GDGCHC 1 cut(s) 2413
MlsI TGGCCA 2 cut(s) 338, 843
MluI ACGCGT 1 cut(s) 2495
MluNI TGGCCA 2 cut(s) 338, 843
MlyI GAGTC 4 cut(s) 543, 628, 988, 2780
MmeI TCCRAC 5 cut(s) 350, 532, 1324, 1688, 1883
Mox20I TGGCCA 2 cut(s) 338, 843
Mph1103I ATGCAT 3 cut(s) 1873, 1894, 2908
MroXI GAANNNNTTC 2 cut(s) 1572, 2497
MscI TGGCCA 2 cut(s) 338, 843
MslI CAYNNNNRTG 2 cut(s) 172, 2757
Msp20I TGGCCA 2 cut(s) 338, 843
MspA1I CMGCKG 1 cut(s) 2864
MspCI CTTAAG 1 cut(s) 3086
MspI CCGG 1 cut(s) 1107
MspR9I CCNGG 8 cut(s) 471, 641, 762, 975, 1108, 1550, 2234, 2528
MunI CAATTG 2 cut(s) 248, 340
Mva1269I GAATGC 3 cut(s) 154, 681, 3103
MvaI CCWGG 7 cut(s) 471, 641, 762, 975, 1550, 2234, 2528
MvnI CGCG 1 cut(s) 2497
MwoI GCNNNNNNNGC 6 cut(s) 419, 2228, 2438, 2855, 2864, 3038
NciI CCSGG 1 cut(s) 1108
NcoI CCATGG 2 cut(s) 2413, 2587
NdeI CATATG 3 cut(s) 1055, 1867, 1995
NdeII GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
NlaIII CATG 9 cut(s) 171, 2417, 2489, 2509, 2591, 2614, 2633, 2645, 2807
NlaIV GGNNCC 9 cut(s) 255, 463, 1327, 1684, 2410, 2442, 2624, 2799, 2994
NmuCI GTSAC 4 cut(s) 96, 191, 1736, 2735
NsiI ATGCAT 3 cut(s) 1873, 1894, 2908
PagI TCATGA 1 cut(s) 2629
PaqCI CACCTGC 1 cut(s) 1814
PasI CCCWGGG 2 cut(s) 2233, 2527
PceI AGGCCT 2 cut(s) 2202, 2432
PciSI GCTCTTC 1 cut(s) 1563
PctI GAATGC 3 cut(s) 154, 681, 3103
PdmI GAANNNNTTC 2 cut(s) 1572, 2497
PflMI CCANNNNNTGG 7 cut(s) 111, 208, 767, 961, 2135, 3002, 3127
PkrI GCNGC 3 cut(s) 6, 1143, 2866
PleI GAGTC 4 cut(s) 542, 627, 988, 2780
PpsI GAGTC 4 cut(s) 542, 627, 988, 2780
PpuMI RGGWCCY 2 cut(s) 254, 1006
PshAI GACNNNNGTC 1 cut(s) 119
Psp5II RGGWCCY 2 cut(s) 254, 1006
Psp6I CCWGG 7 cut(s) 469, 639, 760, 973, 1548, 2232, 2526
PspGI CCWGG 7 cut(s) 469, 639, 760, 973, 1548, 2232, 2526
PspN4I GGNNCC 9 cut(s) 255, 463, 1327, 1684, 2410, 2442, 2624, 2799, 2994
PspPI GGNCC 5 cut(s) 114, 254, 1006, 1610, 2584
PspPPI RGGWCCY 2 cut(s) 254, 1006
PstI CTGCAG 1 cut(s) 2869
PsuI RGATCY 1 cut(s) 2992
RseI CAYNNNNRTG 2 cut(s) 172, 2757
SapI GCTCTTC 1 cut(s) 1563
SatI GCNGC 3 cut(s) 5, 1142, 2865
Sau3AI GATC 8 cut(s) 1664, 1948, 1990, 2386, 2836, 2992, 3064, 3069
Sau96I GGNCC 5 cut(s) 114, 254, 1006, 1610, 2584
SchI GAGTC 4 cut(s) 543, 628, 988, 2780
ScrFI CCNGG 8 cut(s) 471, 641, 762, 975, 1108, 1550, 2234, 2528
SduI GDGCHC 1 cut(s) 2413
SexAI ACCWGGT 1 cut(s) 639
SfaNI GCATC 8 cut(s) 445, 511, 978, 2551, 2623, 2858, 2915, 3205
SfcI CTRYAG 4 cut(s) 559, 1119, 2683, 2865
SinI GGWCC 5 cut(s) 114, 254, 1006, 1610, 2584
SmiMI CAYNNNNRTG 2 cut(s) 172, 2757
SpeI ACTAGT 1 cut(s) 958
SseBI AGGCCT 2 cut(s) 2202, 2432
SsiI CCGC 3 cut(s) 2680, 2862, 3101
StuI AGGCCT 2 cut(s) 2202, 2432
StyD4I CCNGG 8 cut(s) 469, 639, 760, 973, 1106, 1548, 2232, 2526
StyI CCWWGG 3 cut(s) 687, 2413, 2587
TaaI ACNGT 9 cut(s) 61, 452, 560, 1410, 2162, 2180, 2422, 2711, 2945
TaiI ACGT 3 cut(s) 1662, 1768, 2060
TaqI TCGA 6 cut(s) 1315, 1694, 1947, 2545, 2755, 3117
TaqII GACCGA 1 cut(s) 3196
TatI WGTACW 4 cut(s) 1089, 2601, 2940, 3155
TscAI CASTG 5 cut(s) 64, 232, 1255, 1399, 1731
TseFI GTSAC 4 cut(s) 96, 191, 1736, 2735
TseI GCWGC 3 cut(s) 4, 1141, 2864
Tsp45I GTSAC 4 cut(s) 96, 191, 1736, 2735
TspGWI ACGGA 1 cut(s) 538
TspRI CASTG 5 cut(s) 64, 232, 1255, 1399, 1731
Van91I CCANNNNNTGG 7 cut(s) 111, 208, 767, 961, 2135, 3002, 3127
Vha464I CTTAAG 1 cut(s) 3086
VpaK11BI GGWCC 5 cut(s) 114, 254, 1006, 1610, 2584
XagI CCTNNNNNAGG 2 cut(s) 2351, 3089
XbaI TCTAGA 2 cut(s) 649, 2909
XcmI CCANNNNNNNNNTGG 2 cut(s) 1053, 2667
XmiI GTMKAC 2 cut(s) 947, 1543
XmnI GAANNNNTTC 2 cut(s) 1572, 2497
Zsp2I ATGCAT 3 cut(s) 1873, 1894, 2908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.