Rmu_ssc0000020.1_g000002
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000020.1
Physical Location & Seq
Forward (+)
11770 .. 13669
1900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000020.1_g000002.1.cds

Sequence Viewer

Length: 1812 bp
atggacatcagcagcaatgagattagtggagaaattccatcaagcttgggaaagtgtagcagcctcacctccatcaacttggccatgaataagttaacaggagttataccagaggagctaggataccttgcagatcttcatattttggatctttcccacaacagtttggtgggtgctttgccttctagcctatccaattgcaccaaaatgctggagtttgatgtggggtccaacttcttgaatggctccattcctttgagtttgagtagttggacaggtttatctaaattggtattaagtgagaacaggtttactggcggcattccaaccttcttgtcagaatttaaagagctttcggagctacaacttggtggaaatttgttgggaggtgtgattccatcgtcagttggagcactgcagaatttgttttatgctctgaaccttagcaataatgcattgacaggtgtggttccttcagagcttggaaagttgacaatgctacagcgactagatttatctcataacaatctgacggggactttgagggctcttgatgggatgatttcattgattgaggttaatgtttcatacaatagcttcacaggtgcagtaccagaaacattgatgaacctgttaaactcatcctcattttccttttccagcaatccctccctatgtgtcagttaccttccatcatgtggcttcacttgtgctggaaacaacactattaagctctgtaatagtcaatcaagcaagcagaaaggacttagtaaagtggaaattgcatttatagccctaggatcatcgatactagttgtttctctgctgtatctactggtgtatttgttttgcttgcacaaaaggactacgcaggaggttggggtctcagctcgagagggtccatcttccttactctccaaagtcatggaggctacagagaaccttagtgatagatatatcattgggagtggagcccatggaactgtttatcgagcttctttggatgaagacaaagattttgctgtcaagaagcttgtatttgaagggcatgaaggaaggcgtttgagcatgattagagaacttcaaacccttgggaagatcaggcaccggaatctggttaaattggaagacttctggttaagaaaggactatggcttaatcttgtataggtacatgcaaaatgggagccttcatgatgttttgcacgaaattagccccccactaattctggagtggagtgtccgctacaagatagcactgggaactgcatacggcttagaatatctccattatgattgtgatcccccaatagtgcatcgagatatcaagccaatgaacattctgttagactctgatatggaagctcatattgctgattttggaattgctaaactcttggatcagtctactccttcaacggtgtccatctcagttgttggtacaaccggatatatcgcaccagaaaatgcattcagaacagcaagcagtgtggaatctgatgtgtacagttatggggttgttttacttgagctgataactagaaagaaggcattggatccatcatttatggagcaaactgacattgcaggatgggttaaatccgtgtggggcgacacagaaaaaattgataggattgttgattcaagccttgtgggggaacttctggactcagatatcagggaacaaattgttgatgtgcttcttgtggctttcagctgtactcataatgatcctaagaagcgacccacgatgagagatgttatcaagcaattattagatgtaaattccccaatgaggagcacaaaattctag
Functional Annotation

Protein Analysis

603

Amino Acids

66.1

Weight (kDa)

5.54

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011195)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1104
AccB7I CCANNNNNTGG 1 cut(s) 698
AccI GTMKAC 1 cut(s) 1406
AciI CCGC 2 cut(s) 318, 1243
AclWI GGATC 7 cut(s) 156, 808, 1295, 1407, 1550, 1563, 1724
AcoI YGGCCR 1 cut(s) 81
AcsI RAATTY 6 cut(s) 33, 341, 376, 421, 1783, 1805
AcuI CTGAAG 1 cut(s) 459
AfaI GTAC 5 cut(s) 612, 1172, 1441, 1505, 1720
AfiI CCNNNNNNNGG 4 cut(s) 698, 1114, 1654, 1794
AgsI TTSAA 5 cut(s) 241, 1043, 1085, 1416, 1644
AhlI ACTAGT 1 cut(s) 811
Alw21I GWGCWC 2 cut(s) 415, 1802
Alw26I GTCTC 1 cut(s) 889
AlwI GGATC 7 cut(s) 156, 808, 1295, 1407, 1550, 1563, 1724
Ama87I CYCGRG 1 cut(s) 891
AoxI GGCC 1 cut(s) 81
ApeKI GCWGC 2 cut(s) 12, 60
ApoI RAATTY 6 cut(s) 33, 341, 376, 421, 1783, 1805
ArsI GACNNNNNNTTYG 4 cut(s) 523, 555, 1001, 1033
AspA2I CCTAGG 1 cut(s) 796
AspS9I GGNCC 2 cut(s) 228, 899
AsuHPI GGTGA 1 cut(s) 58
AvaI CYCGRG 1 cut(s) 891
AvaII GGWCC 2 cut(s) 228, 899
AvrII CCTAGG 1 cut(s) 796
BalI TGGCCA 1 cut(s) 83
BamHI GGATCC 1 cut(s) 1555
BanI GGYRCC 1 cut(s) 1104
BanII GRGCYC 2 cut(s) 550, 976
BbsI GAAGAC 2 cut(s) 1014, 1134
Bbv12I GWGCWC 2 cut(s) 415, 1802
BbvI GCAGC 2 cut(s) 24, 72
BccI CCATC 9 cut(s) 46, 80, 406, 548, 700, 910, 1433, 1567, 1584
BceAI ACGGC 1 cut(s) 1288
BciVI GTATCC 1 cut(s) 116
BcoDI GTCTC 1 cut(s) 889
BcuI ACTAGT 1 cut(s) 811
BfaI CTAG 7 cut(s) 119, 186, 509, 797, 812, 1539, 1810
BfmI CTRYAG 3 cut(s) 416, 500, 933
BfuI GTATCC 1 cut(s) 116
BglII AGATCT 1 cut(s) 133
BisI GCNGC 3 cut(s) 13, 61, 319
BlnI CCTAGG 1 cut(s) 796
BlsI GCNGC 3 cut(s) 14, 62, 320
Bme18I GGWCC 2 cut(s) 228, 899
BmeT110I CYCGRG 1 cut(s) 891
BmgT120I GGNCC 2 cut(s) 228, 899
BmiI GGNNCC 8 cut(s) 229, 247, 471, 900, 973, 1106, 1187, 1557
BmrI ACTGGG 1 cut(s) 1268
BmsI GCATC 1 cut(s) 1324
BmuI ACTGGG 1 cut(s) 1268
BpiI GAAGAC 2 cut(s) 1014, 1134
BpmI CTGGAG 2 cut(s) 233, 1250
Bpu10I CCTNAGC 1 cut(s) 443
BpuEI CTTGAG 1 cut(s) 1547
Bsa29I ATCGAT 1 cut(s) 806
BsaBI GATNNNNATC 1 cut(s) 1299
BsaI GGTCTC 1 cut(s) 889
BsaJI CCNNGG 3 cut(s) 796, 976, 1090
BsaWI WCCGGW 2 cut(s) 1107, 1445
Bsc4I CCNNNNNNNGG 4 cut(s) 698, 1114, 1654, 1794
Bse1I ACTGG 3 cut(s) 319, 840, 1263
Bse3DI GCAATG 2 cut(s) 22, 1581
Bse8I GATNNNNATC 1 cut(s) 1299
BseCI ATCGAT 1 cut(s) 806
BseDI CCNNGG 3 cut(s) 796, 976, 1090
BseGI GGATG 4 cut(s) 564, 641, 1009, 1595
BseJI GATNNNNATC 1 cut(s) 1299
BseLI CCNNNNNNNGG 4 cut(s) 698, 1114, 1654, 1794
BseMI GCAATG 2 cut(s) 22, 1581
BseMII CTCAG 3 cut(s) 900, 1443, 1683
BseNI ACTGG 3 cut(s) 319, 840, 1263
BseRI GAGGAG 2 cut(s) 128, 1810
BseXI GCAGC 2 cut(s) 24, 72
BsgI GTGCAG 1 cut(s) 627
BshFI GGCC 1 cut(s) 83
BshNI GGYRCC 1 cut(s) 1104
BshVI ATCGAT 1 cut(s) 806
BsiHKAI GWGCWC 2 cut(s) 415, 1802
BsiHKCI CYCGRG 1 cut(s) 891
BsiSI CCGG 2 cut(s) 1108, 1446
BslFI GGGAC 1 cut(s) 550
BslI CCNNNNNNNGG 4 cut(s) 698, 1114, 1654, 1794
BsmAI GTCTC 1 cut(s) 889
BsmFI GGGAC 1 cut(s) 550
BsmI GAATGC 2 cut(s) 321, 1469
BsnI GGCC 1 cut(s) 83
Bso31I GGTCTC 1 cut(s) 889
BsoBI CYCGRG 1 cut(s) 891
Bsp1286I GDGCHC 4 cut(s) 415, 550, 976, 1802
Bsp1407I TGTACA 1 cut(s) 1503
Bsp143I GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
Bsp19I CCATGG 1 cut(s) 976
BspACI CCGC 2 cut(s) 318, 1243
BspANI GGCC 1 cut(s) 83
BspCNI CTCAG 3 cut(s) 899, 1442, 1682
BspDI ATCGAT 1 cut(s) 806
BspHI TCATGA 1 cut(s) 1192
BspLI GGNNCC 8 cut(s) 229, 247, 471, 900, 973, 1106, 1187, 1557
BspMAI CTGCAG 1 cut(s) 420
BspPI GGATC 7 cut(s) 156, 808, 1295, 1407, 1550, 1563, 1724
BspT107I GGYRCC 1 cut(s) 1104
BspTNI GGTCTC 1 cut(s) 889
BsrDI GCAATG 2 cut(s) 22, 1581
BsrGI TGTACA 1 cut(s) 1503
BsrI ACTGG 3 cut(s) 319, 840, 1263
BssECI CCNNGG 3 cut(s) 796, 976, 1090
BssMI GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
BssT1I CCWWGG 3 cut(s) 796, 976, 1090
Bst4CI ACNGT 4 cut(s) 164, 985, 1420, 1508
BstAUI TGTACA 1 cut(s) 1503
BstC8I GCNNGC 3 cut(s) 755, 854, 1483
BstDEI CTNAG 8 cut(s) 443, 767, 886, 944, 1276, 1429, 1669, 1734
BstDSI CCRYGG 1 cut(s) 976
BstF5I GGATG 4 cut(s) 564, 641, 1009, 1595
BstKTI GATC 8 cut(s) 136, 151, 803, 1101, 1303, 1402, 1558, 1732
BstMAI GTCTC 1 cut(s) 889
BstMBI GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
BstMWI GCNNNNNNNGC 3 cut(s) 358, 791, 1370
BstNSI RCATGY 1 cut(s) 1177
BstSFI CTRYAG 3 cut(s) 416, 500, 933
BstV1I GCAGC 2 cut(s) 24, 72
BstV2I GAAGAC 2 cut(s) 1014, 1134
BstX2I RGATCY 3 cut(s) 133, 148, 1555
BstXI CCANNNNNNTGG 3 cut(s) 79, 211, 925
BstYI RGATCY 3 cut(s) 133, 148, 1555
Bsu15I ATCGAT 1 cut(s) 806
BsuI GTATCC 1 cut(s) 116
BsuRI GGCC 1 cut(s) 83
BsuTUI ATCGAT 1 cut(s) 806
BtgI CCRYGG 1 cut(s) 976
BtsCI GGATG 4 cut(s) 564, 641, 1009, 1595
BtsI GCAGTG 2 cut(s) 413, 1492
BtsIMutI CAGTG 3 cut(s) 413, 1256, 1492
Cac8I GCNNGC 3 cut(s) 755, 854, 1483
CciI TCATGA 1 cut(s) 1192
Cfr13I GGNCC 2 cut(s) 228, 899
ClaI ATCGAT 1 cut(s) 806
Csp6I GTAC 5 cut(s) 611, 1171, 1440, 1504, 1719
CspCI CAANNNNNGTGG 4 cut(s) 1470, 1505, 1632, 1667
CviAII CATG 8 cut(s) 85, 696, 925, 977, 1049, 1069, 1174, 1193
CviQI GTAC 5 cut(s) 611, 1171, 1440, 1504, 1719
DdeI CTNAG 8 cut(s) 443, 767, 886, 944, 1276, 1429, 1669, 1734
DpnI GATC 8 cut(s) 135, 150, 802, 1100, 1302, 1401, 1557, 1731
DpnII GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
DraI TTTAAA 1 cut(s) 346
EaeI YGGCCR 1 cut(s) 81
Eco130I CCWWGG 3 cut(s) 796, 976, 1090
Eco24I GRGCYC 2 cut(s) 550, 976
Eco31I GGTCTC 1 cut(s) 889
Eco32I GATATC 2 cut(s) 1324, 1675
Eco47I GGWCC 2 cut(s) 228, 899
Eco57I CTGAAG 1 cut(s) 459
Eco88I CYCGRG 1 cut(s) 891
EcoRV GATATC 2 cut(s) 1324, 1675
EcoT14I CCWWGG 3 cut(s) 796, 976, 1090
EcoT22I ATGCAT 2 cut(s) 457, 1471
EcoT38I GRGCYC 2 cut(s) 550, 976
ErhI CCWWGG 3 cut(s) 796, 976, 1090
FaeI CATG 8 cut(s) 88, 699, 928, 980, 1052, 1072, 1177, 1196
FaqI GGGAC 1 cut(s) 550
FatI CATG 8 cut(s) 84, 695, 924, 976, 1048, 1068, 1173, 1192
FblI GTMKAC 1 cut(s) 1406
Fnu4HI GCNGC 3 cut(s) 13, 61, 319
FokI GGATG 4 cut(s) 571, 628, 1016, 1602
FriOI GRGCYC 2 cut(s) 550, 976
Fsp4HI GCNGC 3 cut(s) 13, 61, 319
FspBI CTAG 7 cut(s) 119, 186, 509, 797, 812, 1539, 1810
GluI GCNGC 3 cut(s) 13, 61, 319
GsuI CTGGAG 2 cut(s) 233, 1250
HaeIII GGCC 1 cut(s) 83
HapII CCGG 2 cut(s) 1108, 1446
Hin1II CATG 8 cut(s) 88, 699, 928, 980, 1052, 1072, 1177, 1196
HincII GTYRAC 2 cut(s) 96, 492
HindII GTYRAC 2 cut(s) 96, 492
HindIII AAGCTT 2 cut(s) 43, 1031
HinfI GANTC 6 cut(s) 394, 1111, 1349, 1493, 1640, 1667
HpaI GTTAAC 1 cut(s) 96
HpaII CCGG 2 cut(s) 1108, 1446
HphI GGTGA 1 cut(s) 58
Hpy166II GTNNAC 5 cut(s) 96, 312, 492, 1407, 1504
Hpy188I TCNGA 9 cut(s) 340, 358, 438, 478, 531, 1354, 1475, 1498, 1672
Hpy188III TCNNGA 8 cut(s) 238, 551, 893, 1027, 1193, 1229, 1319, 1664
Hpy8I GTNNAC 5 cut(s) 96, 312, 492, 1407, 1504
HpyCH4III ACNGT 4 cut(s) 164, 985, 1420, 1508
HpyF10VI GCNNNNNNNGC 3 cut(s) 358, 791, 1370
HpyF3I CTNAG 8 cut(s) 443, 767, 886, 944, 1276, 1429, 1669, 1734
Hsp92II CATG 8 cut(s) 88, 699, 928, 980, 1052, 1072, 1177, 1196
KspAI GTTAAC 1 cut(s) 96
Kzo9I GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
LmnI GCTCC 8 cut(s) 115, 251, 358, 410, 971, 1185, 1570, 1797
Lsp1109I GCAGC 2 cut(s) 24, 72
LweI GCATC 1 cut(s) 1324
MaeI CTAG 7 cut(s) 119, 186, 509, 797, 812, 1539, 1810
MaeIII GTNAC 1 cut(s) 683
MalI GATC 8 cut(s) 135, 150, 802, 1100, 1302, 1401, 1557, 1731
MboI GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
MboII GAAGA 5 cut(s) 128, 897, 1019, 1108, 1139
MfeI CAATTG 1 cut(s) 196
MflI RGATCY 3 cut(s) 133, 148, 1555
MhlI GDGCHC 4 cut(s) 415, 550, 976, 1802
MlsI TGGCCA 1 cut(s) 83
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 2 cut(s) 1343, 1661
MmeI TCCRAC 4 cut(s) 251, 255, 350, 388
Mox20I TGGCCA 1 cut(s) 83
Mph1103I ATGCAT 2 cut(s) 457, 1471
MscI TGGCCA 1 cut(s) 83
MslI CAYNNNNRTG 1 cut(s) 206
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 1716
MspI CCGG 2 cut(s) 1108, 1446
MunI CAATTG 1 cut(s) 196
Mva1269I GAATGC 2 cut(s) 321, 1469
MwoI GCNNNNNNNGC 3 cut(s) 358, 791, 1370
NcoI CCATGG 1 cut(s) 976
NdeII GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
NlaIII CATG 8 cut(s) 88, 699, 928, 980, 1052, 1072, 1177, 1196
NlaIV GGNNCC 8 cut(s) 229, 247, 471, 900, 973, 1106, 1187, 1557
NsiI ATGCAT 2 cut(s) 457, 1471
NspI RCATGY 1 cut(s) 1177
PaeR7I CTCGAG 1 cut(s) 891
PagI TCATGA 1 cut(s) 1192
PctI GAATGC 2 cut(s) 321, 1469
PfeI GAWTC 4 cut(s) 394, 1111, 1493, 1640
PflMI CCANNNNNTGG 1 cut(s) 698
PkrI GCNGC 3 cut(s) 14, 62, 320
PleI GAGTC 2 cut(s) 1343, 1661
PpsI GAGTC 2 cut(s) 1343, 1661
PspN4I GGNNCC 8 cut(s) 229, 247, 471, 900, 973, 1106, 1187, 1557
PspPI GGNCC 2 cut(s) 228, 899
PstI CTGCAG 1 cut(s) 420
PsuI RGATCY 3 cut(s) 133, 148, 1555
PvuII CAGCTG 1 cut(s) 1716
RsaI GTAC 5 cut(s) 612, 1172, 1441, 1505, 1720
RsaNI GTAC 5 cut(s) 611, 1171, 1440, 1504, 1719
RseI CAYNNNNRTG 1 cut(s) 206
SatI GCNGC 3 cut(s) 13, 61, 319
Sau3AI GATC 8 cut(s) 133, 148, 800, 1098, 1300, 1399, 1555, 1729
Sau96I GGNCC 2 cut(s) 228, 899
SchI GAGTC 2 cut(s) 1343, 1661
SduI GDGCHC 4 cut(s) 415, 550, 976, 1802
SfaNI GCATC 1 cut(s) 1324
SfcI CTRYAG 3 cut(s) 416, 500, 933
Sfr274I CTCGAG 1 cut(s) 891
SinI GGWCC 2 cut(s) 228, 899
SlaI CTCGAG 1 cut(s) 891
SmiMI CAYNNNNRTG 1 cut(s) 206
SmlI CTYRAG 2 cut(s) 891, 1526
SmoI CTYRAG 2 cut(s) 891, 1526
SpeI ACTAGT 1 cut(s) 811
SsiI CCGC 2 cut(s) 318, 1243
SspMI CTAG 7 cut(s) 119, 186, 509, 797, 812, 1539, 1810
StyI CCWWGG 3 cut(s) 796, 976, 1090
TaaI ACNGT 4 cut(s) 164, 985, 1420, 1508
TaqI TCGA 4 cut(s) 806, 892, 991, 1318
TatI WGTACW 2 cut(s) 1503, 1718
TauI GCSGC 1 cut(s) 321
TfiI GAWTC 4 cut(s) 394, 1111, 1493, 1640
TscAI CASTG 3 cut(s) 420, 1263, 1492
TseI GCWGC 2 cut(s) 12, 60
TspDTI ATGAA 9 cut(s) 101, 128, 555, 576, 641, 1020, 1065, 1181, 1349
TspGWI ACGGA 1 cut(s) 1591
TspRI CASTG 3 cut(s) 420, 1263, 1492
Van91I CCANNNNNTGG 1 cut(s) 698
VpaK11BI GGWCC 2 cut(s) 228, 899
XapI RAATTY 6 cut(s) 33, 341, 376, 421, 1783, 1805
XceI RCATGY 1 cut(s) 1177
XhoI CTCGAG 1 cut(s) 891
XmaJI CCTAGG 1 cut(s) 796
XmiI GTMKAC 1 cut(s) 1406
XspI CTAG 7 cut(s) 119, 186, 509, 797, 812, 1539, 1810
Zsp2I ATGCAT 2 cut(s) 457, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.