No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G42975 |
| fragaria_vesca | FvH4_6g38570 |
| malus_domestica | MD09G1149700.v1.1 MD17G1136600.v1.1 |
| prunus_persica | Prupe.3G176400_v2.0.a1 |
| pyrus_communis | pycom09g06910 pycom17g13010 |
| rosa_chinensis | RchiOBHm_Chr2g0151981 |
| rosa_laevigata | RLG00000020596 |
| rosa_multiflora | Rmu_sc0017048.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00096080 |
| rosa_rugosa | Rorug02G0430000 |
| rosa_samantha | Rh2AG490700 Rh2BG503000 Rh2CG477100 Rh2DG514200 |
| rosa_wichuraiana | Rw0G020210 Rw2G040330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 430 |
| AclWI | GGATC | 2 cut(s) | 217, 246 |
| AfaI | GTAC | 3 cut(s) | 116, 513, 564 |
| AgsI | TTSAA | 2 cut(s) | 457, 483 |
| AluBI | AGCT | 7 cut(s) | 112, 164, 171, 267, 303, 449, 568 |
| AluI | AGCT | 7 cut(s) | 112, 164, 171, 267, 303, 449, 568 |
| Alw26I | GTCTC | 1 cut(s) | 424 |
| AlwI | GGATC | 2 cut(s) | 217, 246 |
| AoxI | GGCC | 1 cut(s) | 18 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 3 cut(s) | 38, 358, 371 |
| AsuNHI | GCTAGC | 1 cut(s) | 299 |
| BbsI | GAAGAC | 2 cut(s) | 192, 448 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 3 cut(s) | 133, 326, 350 |
| BceAI | ACGGC | 1 cut(s) | 248 |
| BcoDI | GTCTC | 1 cut(s) | 424 |
| BfaI | CTAG | 3 cut(s) | 264, 300, 332 |
| BfmI | CTRYAG | 1 cut(s) | 546 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| BmsI | GCATC | 1 cut(s) | 286 |
| BmtI | GCTAGC | 1 cut(s) | 303 |
| BpiI | GAAGAC | 2 cut(s) | 192, 448 |
| BpuEI | CTTGAG | 1 cut(s) | 43 |
| BsaBI | GATNNNNATC | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 1 cut(s) | 405 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 495, 525 |
| Bse8I | GATNNNNATC | 1 cut(s) | 214 |
| BseDI | CCNNGG | 1 cut(s) | 405 |
| BseGI | GGATG | 1 cut(s) | 318 |
| BseJI | GATNNNNATC | 1 cut(s) | 214 |
| BseMII | CTCAG | 4 cut(s) | 147, 156, 164, 482 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshFI | GGCC | 1 cut(s) | 20 |
| BslFI | GGGAC | 1 cut(s) | 387 |
| BsmAI | GTCTC | 1 cut(s) | 424 |
| BsmFI | GGGAC | 1 cut(s) | 387 |
| BsnI | GGCC | 1 cut(s) | 20 |
| Bsp1407I | TGTACA | 1 cut(s) | 562 |
| Bsp143I | GATC | 2 cut(s) | 209, 238 |
| BspACI | CCGC | 1 cut(s) | 430 |
| BspANI | GGCC | 1 cut(s) | 20 |
| BspCNI | CTCAG | 4 cut(s) | 148, 157, 163, 481 |
| BspOI | GCTAGC | 1 cut(s) | 303 |
| BspPI | GGATC | 2 cut(s) | 217, 246 |
| BsrGI | TGTACA | 1 cut(s) | 562 |
| BssECI | CCNNGG | 1 cut(s) | 405 |
| BssMI | GATC | 2 cut(s) | 209, 238 |
| BssT1I | CCWWGG | 1 cut(s) | 405 |
| Bst4CI | ACNGT | 2 cut(s) | 339, 418 |
| Bst6I | CTCTTC | 2 cut(s) | 48, 70 |
| BstAUI | TGTACA | 1 cut(s) | 562 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstDEI | CTNAG | 5 cut(s) | 150, 156, 165, 468, 569 |
| BstF5I | GGATG | 1 cut(s) | 318 |
| BstKTI | GATC | 2 cut(s) | 212, 241 |
| BstMAI | GTCTC | 1 cut(s) | 424 |
| BstMBI | GATC | 2 cut(s) | 209, 238 |
| BstSFI | CTRYAG | 1 cut(s) | 546 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 2 cut(s) | 192, 448 |
| BstX2I | RGATCY | 2 cut(s) | 209, 238 |
| BstYI | RGATCY | 2 cut(s) | 209, 238 |
| BsuRI | GGCC | 1 cut(s) | 20 |
| BtsCI | GGATG | 1 cut(s) | 318 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| Csp6I | GTAC | 3 cut(s) | 115, 512, 563 |
| CviJI | RGCY | 9 cut(s) | 20, 112, 164, 171, 235, 267, 303, 449, 568 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 112, 164, 171, 235, 267, 303, 449, 568 |
| CviQI | GTAC | 3 cut(s) | 115, 512, 563 |
| DdeI | CTNAG | 5 cut(s) | 150, 156, 165, 468, 569 |
| DpnI | GATC | 2 cut(s) | 211, 240 |
| DpnII | GATC | 2 cut(s) | 209, 238 |
| Eam1104I | CTCTTC | 2 cut(s) | 48, 70 |
| EarI | CTCTTC | 2 cut(s) | 48, 70 |
| Eco130I | CCWWGG | 1 cut(s) | 405 |
| EcoT14I | CCWWGG | 1 cut(s) | 405 |
| ErhI | CCWWGG | 1 cut(s) | 405 |
| FaiI | YATR | 4 cut(s) | 17, 288, 548, 561 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 433, 465 |
| FaqI | GGGAC | 1 cut(s) | 387 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FokI | GGATG | 1 cut(s) | 305 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| FspBI | CTAG | 3 cut(s) | 264, 300, 332 |
| GluI | GCNGC | 1 cut(s) | 36 |
| HaeIII | GGCC | 1 cut(s) | 20 |
| HincII | GTYRAC | 1 cut(s) | 277 |
| HindII | GTYRAC | 1 cut(s) | 277 |
| HindIII | AAGCTT | 1 cut(s) | 447 |
| HinfI | GANTC | 1 cut(s) | 479 |
| HphI | GGTGA | 3 cut(s) | 38, 358, 371 |
| Hpy166II | GTNNAC | 1 cut(s) | 277 |
| Hpy188I | TCNGA | 5 cut(s) | 137, 157, 392, 440, 471 |
| Hpy188III | TCNNGA | 2 cut(s) | 207, 306 |
| Hpy8I | GTNNAC | 1 cut(s) | 277 |
| HpyAV | CCTTC | 4 cut(s) | 66, 153, 201, 387 |
| HpyCH4III | ACNGT | 2 cut(s) | 339, 418 |
| HpyF3I | CTNAG | 5 cut(s) | 150, 156, 165, 468, 569 |
| Kzo9I | GATC | 2 cut(s) | 209, 238 |
| LmnI | GCTCC | 4 cut(s) | 161, 247, 308, 503 |
| LpnPI | CCDG | 4 cut(s) | 157, 192, 221, 540 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| LweI | GCATC | 1 cut(s) | 286 |
| MaeI | CTAG | 3 cut(s) | 264, 300, 332 |
| MaeIII | GTNAC | 1 cut(s) | 3 |
| MalI | GATC | 2 cut(s) | 211, 240 |
| MboI | GATC | 2 cut(s) | 209, 238 |
| MflI | RGATCY | 2 cut(s) | 209, 238 |
| MluCI | AATT | 2 cut(s) | 540, 580 |
| MnlI | CCTC | 7 cut(s) | 114, 151, 175, 268, 275, 465, 534 |
| MroXI | GAANNNNTTC | 1 cut(s) | 142 |
| MseI | TTAA | 5 cut(s) | 29, 177, 413, 579, 583 |
| NdeII | GATC | 2 cut(s) | 209, 238 |
| NheI | GCTAGC | 1 cut(s) | 299 |
| NmuCI | GTSAC | 1 cut(s) | 3 |
| PacI | TTAATTAA | 1 cut(s) | 583 |
| PdmI | GAANNNNTTC | 1 cut(s) | 142 |
| PfeI | GAWTC | 1 cut(s) | 479 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PsuI | RGATCY | 2 cut(s) | 209, 238 |
| RsaI | GTAC | 3 cut(s) | 116, 513, 564 |
| RsaNI | GTAC | 3 cut(s) | 115, 512, 563 |
| SaqAI | TTAA | 5 cut(s) | 29, 177, 413, 579, 583 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 2 cut(s) | 209, 238 |
| SfaNI | GCATC | 1 cut(s) | 286 |
| SfcI | CTRYAG | 1 cut(s) | 546 |
| SmlI | CTYRAG | 1 cut(s) | 22 |
| SmoI | CTYRAG | 1 cut(s) | 22 |
| Sse9I | AATT | 2 cut(s) | 540, 580 |
| SsiI | CCGC | 1 cut(s) | 430 |
| SspI | AATATT | 1 cut(s) | 534 |
| SspMI | CTAG | 3 cut(s) | 264, 300, 332 |
| StyI | CCWWGG | 1 cut(s) | 405 |
| TaaI | ACNGT | 2 cut(s) | 339, 418 |
| TasI | AATT | 2 cut(s) | 540, 580 |
| TatI | WGTACW | 2 cut(s) | 511, 562 |
| TfiI | GAWTC | 1 cut(s) | 479 |
| Tru1I | TTAA | 5 cut(s) | 29, 177, 413, 579, 583 |
| Tru9I | TTAA | 5 cut(s) | 29, 177, 413, 579, 583 |
| TseFI | GTSAC | 1 cut(s) | 3 |
| TseI | GCWGC | 1 cut(s) | 35 |
| Tsp45I | GTSAC | 1 cut(s) | 3 |
| TspDTI | ATGAA | 4 cut(s) | 66, 192, 204, 474 |
| TspGWI | ACGGA | 2 cut(s) | 294, 311 |
| XmnI | GAANNNNTTC | 1 cut(s) | 142 |
| XspI | CTAG | 3 cut(s) | 264, 300, 332 |