FvH4_6g43080
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0014534
Physical Location & Seq
Forward (+)
33374136 .. 33377341
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g43080.t1

Sequence Viewer

Length: 1620 bp
ATGATCATGAGCCACAGCGGAGATGGATCAATGGACTTGAGCGAGATGGTTGCTGCGGCAAGCCAGTTAGGATGTGGGGGCCACCACCAGCTTCATCAACCTCTCCGGGGGCTGAAGAAGGGGCCATGGACAGCGGCCGAGGATTCGATTCTGATGGAGTACGTGAAGAAACACGGTGAGGGGAACTGGAACGCCGTGCAGAAGAACTCAGGGCTTGCGAGGTGCGGCAAGAGCTGCAGACTCAGGTGGGCTAACCATTTGAGGCCAAATCTCAAGAAAGGCTCTCTCACTGCCGAGGAGGAGCGAATCATCATCGAACTTCATGCCAAATACGGCAACAAATGGGCTCGCATGGCCTCTCAGTTACCGGGAAGGACTGACAATGAGATAAAGAACTACTGGAACACAAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATTTACCCACACGAGCTTCAACATGAAGGCGCCACTGCTCCATTTCACCACCAACAAGCTCATCATCATCAGCAGCAGAGGCATAACTCAAACTTGTCCTCTTCATTTTCATCACTCCTTTGTTCCTCTCATCCTCGAAAAGCAAATTACAGCTCTACTCCCTCGCTCTCTCTATATGACCATACCAGTTTTGATGCCCCGCTGCAGAACCACCACAACTCTCCTTCTCTTAATTACTCCAACCCCGCCATGACGGCCCAGTTCAACGCTAACGGTGGCTTTGCTATCCCACTATCTCCGGTTTCACCGGTTTCGCCATTTGGGTCCTCATCTTCAGCTCTGTTCAACCAGACCACTTTTCCAAACCAAACCGTATTGTCCACTCCATCTCAGTACTACAACTCAGGCCTTGGGGGATTTGGTAATTACAGTACTCTTACCCATAGCTCGATGATCATGGGAACTCCAACTTATGAACCAATGAACTCGGAGCTCCCTTCTAACCAAACGACACCACCATATTCGCCATACACCCCCACGAAACCTGCTTCTTCTTCTGCTAACTTTAATGGCGGAGAGGGTGTGATGGAGGCTGCTTCCGGCAACACCAATGGCTATGAGATTGAAACTGTAACCTCTCTAGGAAAGAGAGGTAGTGGTCTGTTAGACGATGTGTTGGTGCAAGCTGGTACACTGTCTCGGAACAAGAGATCAAGGAGTGGAGACAGCTCGTCCGGCGAGTCAGGCAAAGACAAATATATTGTGGAGGAGGACGTCGAGTCTGCTGGTGAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGTGGTGAGAATAGTGCTGAAAACCTAAGGGATGGTAGCTCATCTCCATCAGTTGGGATGAAACCAAGTGAAGATCCACTAGAGGACATGGACGATGACTTGTTAAGCCTGCTCAACTTCCAAAATTCAGCGCCAGTCTCCGAGTCGTGGTACGTGGGAAGCATTTCTGATCAGGCATCACCAGGCATGATTGGTGCAAGTGACATTAATGTGAGTCTAGATGTTCAGCAAAACACATCAACATATGCATCCACGGTGAACATGAGTGCAGCCAAACCTGATGTTGAAATTAAGCGCAGCCTTCCTCCATGCTTCTGGAACAACATGCCTGACATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

540

Amino Acids

58.61

Weight (kDa)

5.72

Isoelectric Point (pI)

55.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 40 - 87 1.6e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 43 - 101 1.9e-11 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 93 - 136 4.7e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 97 - 140 6.1e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1218
Acc36I ACCTGC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 470
AccB7I CCANNNNNTGG 1 cut(s) 1331
AciI CCGC 7 cut(s) 18, 56, 134, 225, 641, 687, 1014
AclWI GGATC 2 cut(s) 34, 1346
AcoI YGGCCR 1 cut(s) 135
AcsI RAATTY 1 cut(s) 1402
AcuI CTGAAG 2 cut(s) 134, 759
AcyI GRCGYC 3 cut(s) 421, 471, 1215
AfaI GTAC 5 cut(s) 161, 836, 874, 1132, 1430
AfiI CCNNNNNNNGG 3 cut(s) 107, 1331, 1425
AgeI ACCGGT 1 cut(s) 748
AgsI TTSAA 5 cut(s) 461, 706, 787, 1067, 1565
AhdI GACNNNNNGTC 2 cut(s) 1171, 1219
AjnI CCWGG 1 cut(s) 1459
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 4 cut(s) 412, 1143, 1158, 1420
AlwI GGATC 2 cut(s) 34, 1346
AoxI GGCC 7 cut(s) 79, 122, 135, 263, 354, 696, 847
ApeKI GCWGC 7 cut(s) 53, 234, 514, 643, 1034, 1547, 1575
ApoI RAATTY 1 cut(s) 1402
AseI ATTAAT 1 cut(s) 1485
AsiGI ACCGGT 1 cut(s) 748
Asp700I GAANNNNTTC 1 cut(s) 1441
AspLEI GCGC 3 cut(s) 473, 1411, 1575
AspS9I GGNCC 4 cut(s) 79, 122, 697, 765
AsuC2I CCSGG 2 cut(s) 107, 369
AsuHPI GGTGA 7 cut(s) 188, 479, 738, 1241, 1295, 1449, 1546
AvaII GGWCC 1 cut(s) 765
AxyI CCTNAGG 1 cut(s) 1304
BanI GGYRCC 1 cut(s) 470
BanII GRGCYC 2 cut(s) 349, 936
BauI CACGAG 1 cut(s) 452
BbsI GAAGAC 1 cut(s) 1251
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 7 cut(s) 40, 221, 526, 630, 1021, 1559, 1587
BccI CCATC 7 cut(s) 17, 40, 148, 835, 1021, 1304, 1333
BceAI ACGGC 3 cut(s) 179, 349, 711
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 305, 339
BciT130I CCWGG 1 cut(s) 1461
BclI TGATCA 3 cut(s) 3, 894, 1447
BcnI CCSGG 2 cut(s) 107, 369
BcoDI GTCTC 4 cut(s) 412, 1143, 1158, 1420
BfaI CTAG 3 cut(s) 1082, 1358, 1496
BfmI CTRYAG 2 cut(s) 235, 644
BfoI RGCGCY 2 cut(s) 474, 1412
BfuAI ACCTGC 1 cut(s) 994
BglI GCCNNNNNGGC 1 cut(s) 695
BmcAI AGTACT 2 cut(s) 836, 874
Bme1390I CCNGG 3 cut(s) 107, 369, 1461
Bme18I GGWCC 1 cut(s) 765
BmeRI GACNNNNNGTC 2 cut(s) 1171, 1219
BmgT120I GGNCC 4 cut(s) 79, 122, 697, 765
BmiI GGNNCC 4 cut(s) 80, 123, 472, 766
BmrFI CCNGG 3 cut(s) 107, 369, 1461
BmrI ACTGGG 1 cut(s) 694
BmsI GCATC 3 cut(s) 625, 1463, 1535
BmuI ACTGGG 1 cut(s) 694
BpiI GAAGAC 1 cut(s) 1251
BpuEI CTTGAG 2 cut(s) 58, 257
BpuMI CCSGG 2 cut(s) 107, 369
BsaAI YACGTR 2 cut(s) 163, 1432
BsaHI GRCGYC 3 cut(s) 421, 471, 1215
BsaJI CCNNGG 6 cut(s) 106, 125, 138, 294, 850, 1530
BsaWI WCCGGW 2 cut(s) 739, 748
BsaXI ACNNNNNCTCC 2 cut(s) 1008, 1038
Bsc4I CCNNNNNNNGG 3 cut(s) 107, 1331, 1425
Bse118I RCCGGY 1 cut(s) 748
Bse1I ACTGG 6 cut(s) 64, 191, 404, 627, 700, 1412
Bse21I CCTNAGG 1 cut(s) 1304
BseBI CCWGG 1 cut(s) 1461
BseDI CCNNGG 6 cut(s) 106, 125, 138, 294, 850, 1530
BseGI GGATG 5 cut(s) 77, 571, 1315, 1341, 1526
BseLI CCNNNNNNNGG 3 cut(s) 107, 1331, 1425
BseMII CTCAG 5 cut(s) 222, 256, 374, 845, 858
BseNI ACTGG 6 cut(s) 64, 191, 404, 627, 700, 1412
BseRI GAGGAG 3 cut(s) 311, 314, 1223
BseX3I CGGCCG 1 cut(s) 135
BseXI GCAGC 7 cut(s) 40, 221, 526, 630, 1021, 1559, 1587
BsgI GTGCAG 2 cut(s) 218, 1566
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 7 cut(s) 81, 124, 137, 265, 356, 698, 849
BshNI GGYRCC 1 cut(s) 470
BshTI ACCGGT 1 cut(s) 748
BsiEI CGRYCG 1 cut(s) 138
BsiHKAI GWGCWC 1 cut(s) 936
BsiSI CCGG 7 cut(s) 106, 368, 432, 740, 749, 1041, 1176
BslI CCNNNNNNNGG 3 cut(s) 107, 1331, 1425
BsmAI GTCTC 4 cut(s) 412, 1143, 1158, 1420
BsmBI CGTCTC 1 cut(s) 412
BsnI GGCC 7 cut(s) 81, 124, 137, 265, 356, 698, 849
Bsp1286I GDGCHC 2 cut(s) 349, 936
Bsp143I GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
Bsp19I CCATGG 1 cut(s) 125
BspACI CCGC 7 cut(s) 18, 56, 134, 225, 641, 687, 1014
BspANI GGCC 7 cut(s) 81, 124, 137, 265, 356, 698, 849
BspCNI CTCAG 5 cut(s) 221, 255, 373, 844, 857
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 4 cut(s) 80, 123, 472, 766
BspMAI CTGCAG 2 cut(s) 239, 648
BspMI ACCTGC 1 cut(s) 994
BspPI GGATC 2 cut(s) 34, 1346
BspQI GCTCTTC 1 cut(s) 1268
BspT107I GGYRCC 1 cut(s) 470
BsrFI RCCGGY 1 cut(s) 748
BsrI ACTGG 6 cut(s) 64, 191, 404, 627, 700, 1412
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 6 cut(s) 106, 125, 138, 294, 850, 1530
BssMI GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
BssNI GRCGYC 3 cut(s) 421, 471, 1215
BssSI CACGAG 1 cut(s) 452
BssT1I CCWWGG 2 cut(s) 125, 850
Bst2BI CACGAG 1 cut(s) 452
Bst2UI CCWGG 1 cut(s) 1461
Bst4CI ACNGT 7 cut(s) 176, 716, 814, 872, 1072, 1137, 1534
Bst6I CTCTTC 4 cut(s) 410, 547, 1230, 1268
BstACI GRCGYC 3 cut(s) 421, 471, 1215
BstAPI GCANNNNNTGC 1 cut(s) 234
BstBAI YACGTR 2 cut(s) 163, 1432
BstC8I GCNNGC 5 cut(s) 61, 216, 349, 1125, 1388
BstDEI CTNAG 6 cut(s) 208, 242, 360, 831, 844, 1304
BstDSI CCRYGG 2 cut(s) 125, 1530
BstF5I GGATG 5 cut(s) 77, 571, 1315, 1341, 1526
BstH2I RGCGCY 2 cut(s) 474, 1412
BstHHI GCGC 3 cut(s) 473, 1411, 1575
BstKTI GATC 6 cut(s) 6, 29, 897, 1154, 1354, 1450
BstMAI GTCTC 4 cut(s) 412, 1143, 1158, 1420
BstMBI GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
BstMCI CGRYCG 1 cut(s) 138
BstMWI GCNNNNNNNGC 7 cut(s) 231, 234, 353, 520, 695, 1176, 1185
BstNI CCWGG 1 cut(s) 1461
BstNSI RCATGY 1 cut(s) 1606
BstSCI CCNGG 3 cut(s) 105, 367, 1459
BstSFI CTRYAG 2 cut(s) 235, 644
BstV1I GCAGC 7 cut(s) 40, 221, 526, 630, 1021, 1559, 1587
BstV2I GAAGAC 1 cut(s) 1251
BstX2I RGATCY 1 cut(s) 1351
BstXI CCANNNNNNTGG 1 cut(s) 1593
BstYI RGATCY 1 cut(s) 1351
BstZI CGGCCG 1 cut(s) 135
Bsu36I CCTNAGG 1 cut(s) 1304
BsuRI GGCC 7 cut(s) 81, 124, 137, 265, 356, 698, 849
BtgI CCRYGG 2 cut(s) 125, 1530
BtsCI GGATG 5 cut(s) 77, 571, 1315, 1341, 1526
BtsI GCAGTG 3 cut(s) 288, 474, 1285
BtsIMutI CAGTG 4 cut(s) 288, 474, 1133, 1285
BveI ACCTGC 1 cut(s) 994
Cac8I GCNNGC 5 cut(s) 61, 216, 349, 1125, 1388
CciI TCATGA 1 cut(s) 6
CfoI GCGC 3 cut(s) 473, 1411, 1575
Cfr10I RCCGGY 1 cut(s) 748
Cfr13I GGNCC 4 cut(s) 79, 122, 697, 765
CseI GACGC 1 cut(s) 429
Csp6I GTAC 5 cut(s) 160, 835, 873, 1131, 1429
CspAI ACCGGT 1 cut(s) 748
CviQI GTAC 5 cut(s) 160, 835, 873, 1131, 1429
DdeI CTNAG 6 cut(s) 208, 242, 360, 831, 844, 1304
DinI GGCGCC 1 cut(s) 472
DpnI GATC 6 cut(s) 5, 28, 896, 1153, 1353, 1449
DpnII GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
DriI GACNNNNNGTC 2 cut(s) 1171, 1219
EaeI YGGCCR 1 cut(s) 135
EagI CGGCCG 1 cut(s) 135
Eam1104I CTCTTC 4 cut(s) 410, 547, 1230, 1268
Eam1105I GACNNNNNGTC 2 cut(s) 1171, 1219
EarI CTCTTC 4 cut(s) 410, 547, 1230, 1268
EciI GGCGGA 1 cut(s) 1029
Ecl136II GAGCTC 1 cut(s) 934
EclXI CGGCCG 1 cut(s) 135
Eco130I CCWWGG 2 cut(s) 125, 850
Eco147I AGGCCT 1 cut(s) 849
Eco24I GRGCYC 2 cut(s) 349, 936
Eco47I GGWCC 1 cut(s) 765
Eco52I CGGCCG 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 2 cut(s) 134, 759
Eco81I CCTNAGG 1 cut(s) 1304
EcoICRI GAGCTC 1 cut(s) 934
EcoO109I RGGNCCY 1 cut(s) 765
EcoRII CCWGG 1 cut(s) 1459
EcoT14I CCWWGG 2 cut(s) 125, 850
EcoT22I ATGCAT 1 cut(s) 1528
EcoT38I GRGCYC 2 cut(s) 349, 936
EgeI GGCGCC 1 cut(s) 472
EheI GGCGCC 1 cut(s) 472
ErhI CCWWGG 2 cut(s) 125, 850
Esp3I CGTCTC 1 cut(s) 412
FauI CCCGC 2 cut(s) 648, 694
FauNDI CATATG 1 cut(s) 1522
FbaI TGATCA 3 cut(s) 3, 894, 1447
FokI GGATG 5 cut(s) 84, 558, 1322, 1348, 1513
FriOI GRGCYC 2 cut(s) 349, 936
FspBI CTAG 3 cut(s) 1082, 1358, 1496
GlaI GCGC 3 cut(s) 472, 1410, 1574
HaeII RGCGCY 2 cut(s) 474, 1412
HaeIII GGCC 7 cut(s) 81, 124, 137, 265, 356, 698, 849
HapII CCGG 7 cut(s) 106, 368, 432, 740, 749, 1041, 1176
HgaI GACGC 1 cut(s) 429
HhaI GCGC 3 cut(s) 473, 1411, 1575
Hin1I GRCGYC 3 cut(s) 421, 471, 1215
Hin6I GCGC 3 cut(s) 471, 1409, 1573
HinP1I GCGC 3 cut(s) 471, 1409, 1573
HinfI GANTC 9 cut(s) 143, 148, 240, 306, 1181, 1220, 1262, 1421, 1492
HpaII CCGG 7 cut(s) 106, 368, 432, 740, 749, 1041, 1176
HphI GGTGA 7 cut(s) 188, 479, 738, 1241, 1295, 1449, 1546
Hpy166II GTNNAC 3 cut(s) 822, 1133, 1537
Hpy188I TCNGA 5 cut(s) 153, 931, 1143, 1420, 1447
Hpy188III TCNNGA 4 cut(s) 7, 274, 1496, 1594
Hpy8I GTNNAC 3 cut(s) 822, 1133, 1537
Hpy99I CGWCG 1 cut(s) 1220
HpyAV CCTTC 6 cut(s) 112, 366, 461, 675, 948, 1589
HpyCH4III ACNGT 7 cut(s) 176, 716, 814, 872, 1072, 1137, 1534
HpyCH4IV ACGT 3 cut(s) 162, 1215, 1431
HpyCH4V TGCA 8 cut(s) 199, 237, 646, 1123, 1255, 1475, 1526, 1547
HpyF10VI GCNNNNNNNGC 7 cut(s) 231, 234, 353, 520, 695, 1176, 1185
HpyF3I CTNAG 6 cut(s) 208, 242, 360, 831, 844, 1304
HpySE526I ACGT 3 cut(s) 162, 1215, 1431
Hsp92I GRCGYC 3 cut(s) 421, 471, 1215
HspAI GCGC 3 cut(s) 471, 1409, 1573
KasI GGCGCC 1 cut(s) 470
Ksp22I TGATCA 3 cut(s) 3, 894, 1447
Kzo9I GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
LguI GCTCTTC 1 cut(s) 1268
LmnI GCTCC 4 cut(s) 301, 484, 931, 939
Lsp1109I GCAGC 7 cut(s) 40, 221, 526, 630, 1021, 1559, 1587
LweI GCATC 3 cut(s) 625, 1463, 1535
MaeI CTAG 3 cut(s) 1082, 1358, 1496
MaeII ACGT 3 cut(s) 162, 1215, 1431
MaeIII GTNAC 3 cut(s) 363, 1072, 1478
MalI GATC 6 cut(s) 5, 28, 896, 1153, 1353, 1449
MboI GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
MflI RGATCY 1 cut(s) 1351
MhlI GDGCHC 2 cut(s) 349, 936
MluCI AATT 6 cut(s) 441, 586, 673, 865, 1402, 1566
Mly113I GGCGCC 1 cut(s) 471
MlyI GAGTC 5 cut(s) 234, 1190, 1229, 1430, 1501
MmeI TCCRAC 2 cut(s) 705, 932
Mph1103I ATGCAT 1 cut(s) 1528
MroXI GAANNNNTTC 1 cut(s) 1441
MseI TTAA 5 cut(s) 672, 1008, 1382, 1485, 1569
MslI CAYNNNNRTG 2 cut(s) 410, 1487
MspA1I CMGCKG 3 cut(s) 18, 134, 643
MspI CCGG 7 cut(s) 106, 368, 432, 740, 749, 1041, 1176
MspR9I CCNGG 3 cut(s) 107, 369, 1461
MvaI CCWGG 1 cut(s) 1461
MwoI GCNNNNNNNGC 7 cut(s) 231, 234, 353, 520, 695, 1176, 1185
NarI GGCGCC 1 cut(s) 471
NciI CCSGG 2 cut(s) 107, 369
NcoI CCATGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 1522
NdeII GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
NlaIV GGNNCC 4 cut(s) 80, 123, 472, 766
NmeAIII GCCGAG 2 cut(s) 163, 319
NmuCI GTSAC 1 cut(s) 1478
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 1 cut(s) 1606
PagI TCATGA 1 cut(s) 6
PceI AGGCCT 1 cut(s) 849
PciSI GCTCTTC 1 cut(s) 1268
PdmI GAANNNNTTC 1 cut(s) 1441
PfeI GAWTC 4 cut(s) 143, 148, 306, 1262
PflMI CCANNNNNTGG 1 cut(s) 1331
PinAI ACCGGT 1 cut(s) 748
PleI GAGTC 5 cut(s) 234, 1189, 1228, 1429, 1500
PluTI GGCGCC 1 cut(s) 474
PpsI GAGTC 5 cut(s) 234, 1189, 1228, 1429, 1500
Ppu21I YACGTR 2 cut(s) 163, 1432
PpuMI RGGWCCY 1 cut(s) 765
PshBI ATTAAT 1 cut(s) 1485
Psp124BI GAGCTC 1 cut(s) 936
Psp5II RGGWCCY 1 cut(s) 765
Psp6I CCWGG 1 cut(s) 1459
PspGI CCWGG 1 cut(s) 1459
PspN4I GGNNCC 4 cut(s) 80, 123, 472, 766
PspPI GGNCC 4 cut(s) 79, 122, 697, 765
PspPPI RGGWCCY 1 cut(s) 765
PstI CTGCAG 2 cut(s) 239, 648
PsuI RGATCY 1 cut(s) 1351
RsaI GTAC 5 cut(s) 161, 836, 874, 1132, 1430
RsaNI GTAC 5 cut(s) 160, 835, 873, 1131, 1429
RseI CAYNNNNRTG 2 cut(s) 410, 1487
SacI GAGCTC 1 cut(s) 936
SapI GCTCTTC 1 cut(s) 1268
SaqAI TTAA 5 cut(s) 672, 1008, 1382, 1485, 1569
Sau3AI GATC 6 cut(s) 3, 26, 894, 1151, 1351, 1447
Sau96I GGNCC 4 cut(s) 79, 122, 697, 765
ScaI AGTACT 2 cut(s) 836, 874
SchI GAGTC 5 cut(s) 234, 1190, 1229, 1430, 1501
ScrFI CCNGG 3 cut(s) 107, 369, 1461
SduI GDGCHC 2 cut(s) 349, 936
SfaNI GCATC 3 cut(s) 625, 1463, 1535
SfcI CTRYAG 2 cut(s) 235, 644
SfoI GGCGCC 1 cut(s) 472
SinI GGWCC 1 cut(s) 765
SmiMI CAYNNNNRTG 2 cut(s) 410, 1487
SmlI CTYRAG 2 cut(s) 37, 272
SmoI CTYRAG 2 cut(s) 37, 272
Sse9I AATT 6 cut(s) 441, 586, 673, 865, 1402, 1566
SseBI AGGCCT 1 cut(s) 849
SsiI CCGC 7 cut(s) 18, 56, 134, 225, 641, 687, 1014
SspDI GGCGCC 1 cut(s) 470
SspMI CTAG 3 cut(s) 1082, 1358, 1496
SstI GAGCTC 1 cut(s) 936
StuI AGGCCT 1 cut(s) 849
StyD4I CCNGG 3 cut(s) 105, 367, 1459
StyI CCWWGG 2 cut(s) 125, 850
TaaI ACNGT 7 cut(s) 176, 716, 814, 872, 1072, 1137, 1534
TaiI ACGT 3 cut(s) 165, 1218, 1434
TaqI TCGA 5 cut(s) 146, 315, 577, 890, 1218
TasI AATT 6 cut(s) 441, 586, 673, 865, 1402, 1566
TatI WGTACW 2 cut(s) 834, 872
TauI GCSGC 3 cut(s) 59, 137, 228
TfiI GAWTC 4 cut(s) 143, 148, 306, 1262
Tru1I TTAA 5 cut(s) 672, 1008, 1382, 1485, 1569
Tru9I TTAA 5 cut(s) 672, 1008, 1382, 1485, 1569
TscAI CASTG 4 cut(s) 295, 481, 1140, 1285
TseFI GTSAC 1 cut(s) 1478
TseI GCWGC 7 cut(s) 53, 234, 514, 643, 1034, 1547, 1575
Tsp45I GTSAC 1 cut(s) 1478
TspDTI ATGAA 9 cut(s) 83, 311, 428, 480, 534, 540, 930, 938, 1352
TspRI CASTG 4 cut(s) 295, 481, 1140, 1285
Van91I CCANNNNNTGG 1 cut(s) 1331
VpaK11BI GGWCC 1 cut(s) 765
VspI ATTAAT 1 cut(s) 1485
XapI RAATTY 1 cut(s) 1402
XbaI TCTAGA 1 cut(s) 1495
XceI RCATGY 1 cut(s) 1606
XcmI CCANNNNNNNNNTGG 2 cut(s) 20, 71
XmnI GAANNNNTTC 1 cut(s) 1441
XspI CTAG 3 cut(s) 1082, 1358, 1496
ZraI GACGTC 1 cut(s) 1216
ZrmI AGTACT 2 cut(s) 836, 874
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.