RLG00000021138
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014534
Physical Location & Seq
Forward (+)
72245914 .. 72248240
2327 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021138

Sequence Viewer

Length: 1602 bp
ATGATCATGAGCAACAGCGGAGATGGATCAATGGACTTGAACGAGATGGTTGCGGCAGCCCAGTTAGGAGGTGGGGCCCACCAGCTTCATCAGCCCCTGCGGGGGCTGAAGAAGGGGCCATGGACAGCGGCCGAGGATTCAATTCTGATGGAGTACGTGAAGAAACACGGCGAGGGGAACTGGAACGCCGTGCAGAAGAACTCGGGGCTGGCCAGGTGCGGCAAGAGCTGCAGGCTCCGGTGGGCTAACCATTTGAGGCCTAATCTCAAGAAAGGCTCTCTCACTGCAGAGGAGGAGCGAATGATCATCGAACTTCATGCCAAGTACGGCAACAAATGGGCTCGCATGGCTTCACAGTTACCCGGTAGGACTGACAACGAGATAAAGAACTACTGGAACACAAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATTTACCCTCACGAGCTTCAACATGAAGCCGCTGCTTCATTTCACCACCAACAAGCTCATCAGCAGCAGCAGAGACATAACTCAAACTCGTCCTCTTCTTCATTTTCATCGCTTCTTTCCTCCTCTCATCCTCGAAAAGCAAATTACAGCTCTACCCCATCGCTCTCTCTTTATGACCACATCAGTTTTGATGCCTCTCTGCAGAACCACCACAACTCTCCTTCTCTTAATTACTCCAACTCCGCCATGACGACCCAGTTCAACGGTAACGGTGGCTTTGCTATCCCGCTATCTCCGGTTTCACCGGTTTCCCCATTTGGGTCATCGTCTTCAGCACTGTTCAACCAGACCAATATTCCAAACCAAACCGTTTTGCCAACTCCATCTCAATACTACAGCTCAGGTCATGGAGGTTTTGGCAATTACAGTACTCTTAGCCTTAGCTCGATGATCATGCGGACTCCTACTTATGAGCCAATGAACTCGGAGCTCCCTTCGAACCAAACACCACCATACTCGCCATACACCCCCACGAAACCTGCATCTTCTGCTAACTTTAATGGCGAGGGTCTGATGGAGGCTTCCGGCAACACCAATGGCTACGTGATGGAAACGGTAACCTCTCAAGGAAAGAGAGGCAGTGGTCTGCTGGATGATGTGTTGGTGCAAGCTGATGTAATATGTGGGAACAAGAGATCAAGGAGTGGAGACAGCTCATCCGGCGAGTCAGGGAAAGACAAATATATAGTGGAGGAGGAGGATGAGTCTGCTGGTCAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGCGGTGACAATAGTGCTGAAAACCTAAGGGATGGTAGCTCTTCGCCATCAGTTGGGATGAAACCAAGTGAGGATCCACTAGAGGATATGGACGATGACTTGTTAAGCCTGCTCAACTTCCAATCTGCAGCGCCAGAATCCGAGTCGTGGTATGGGGGAAGCATTTCTGACCAGGCATCACCAGGCATGAATGGTGCAAGTGACAATAATAATGTGAGTCTAGACATTCGGCAAAACACATCGACATATGCATCCACGGTGAACATGAGTGCAGCAGAACCTGATGATGAATTTAAGGGCAGACTTCCTCCATGCTTCTGGAACAACATGCCTGGCATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

534

Amino Acids

57.99

Weight (kDa)

5.41

Isoelectric Point (pI)

53.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 38 - 85 1.5e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 41 - 101 7.8e-12 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 91 - 134 1.4e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 138 2.5e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 982
AccB7I CCANNNNNTGG 1 cut(s) 1310
AclWI GGATC 3 cut(s) 34, 1325, 1338
AcoI YGGCCR 2 cut(s) 129, 210
AcsI RAATTY 1 cut(s) 1547
AcuI CTGAAG 2 cut(s) 128, 750
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 3 cut(s) 155, 326, 865
AfiI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1310, 1404
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 5 cut(s) 40, 141, 455, 697, 778
AjnI CCWGG 4 cut(s) 212, 1428, 1438, 1588
Alw21I GWGCWC 1 cut(s) 927
Alw26I GTCTC 3 cut(s) 406, 502, 1137
AlwI GGATC 3 cut(s) 34, 1325, 1338
AlwNI CAGNNNCTG 2 cut(s) 97, 1538
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 5 cut(s) 75, 116, 129, 210, 257
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 8 cut(s) 56, 228, 467, 499, 502, 1257, 1385, 1529
ApoI RAATTY 1 cut(s) 1547
AsiGI ACCGGT 1 cut(s) 739
Asp700I GAANNNNTTC 1 cut(s) 1420
AspLEI GCGC 1 cut(s) 1390
AspS9I GGNCC 3 cut(s) 75, 76, 116
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 5 cut(s) 470, 729, 1274, 1428, 1528
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 202
AxyI CCTNAGG 1 cut(s) 1283
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 1 cut(s) 1330
BanII GRGCYC 3 cut(s) 79, 343, 927
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 2 cut(s) 756, 1230
Bbv12I GWGCWC 1 cut(s) 927
BbvI GCAGC 8 cut(s) 68, 215, 454, 511, 514, 1269, 1397, 1541
BccI CCATC 9 cut(s) 17, 40, 142, 601, 826, 1003, 1036, 1283, 1312
BceAI ACGGC 3 cut(s) 173, 184, 343
BcgI CGANNNNNNTGC 6 cut(s) 32, 66, 299, 333, 871, 905
BciT130I CCWGG 4 cut(s) 214, 1430, 1440, 1590
BclI TGATCA 3 cut(s) 3, 303, 885
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 3 cut(s) 406, 502, 1137
BfaI CTAG 2 cut(s) 1337, 1478
BfmI CTRYAG 5 cut(s) 229, 285, 635, 829, 1383
BfoI RGCGCY 1 cut(s) 1391
BfuAI ACCTGC 1 cut(s) 982
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 5 cut(s) 214, 363, 1430, 1440, 1590
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 75, 76, 116
BmiI GGNNCC 5 cut(s) 76, 77, 117, 236, 1332
BmrFI CCNGG 5 cut(s) 214, 363, 1430, 1440, 1590
BmrI ACTGGG 2 cut(s) 55, 685
BmsI GCATC 4 cut(s) 616, 986, 1442, 1517
BmuI ACTGGG 2 cut(s) 55, 685
BpiI GAAGAC 2 cut(s) 756, 1230
Bpu10I CCTNAGC 2 cut(s) 835, 875
Bpu14I TTCGAA 1 cut(s) 932
BpuEI CTTGAG 2 cut(s) 251, 1044
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 2 cut(s) 157, 1039
BsaHI GRCGYC 1 cut(s) 415
BsaJI CCNNGG 3 cut(s) 119, 132, 1512
BsaWI WCCGGW 3 cut(s) 237, 730, 739
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1184, 1214
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1310, 1404
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 4 cut(s) 61, 185, 398, 691
Bse21I CCTNAGG 1 cut(s) 1283
BseBI CCWGG 4 cut(s) 214, 1430, 1440, 1590
BseDI CCNNGG 3 cut(s) 119, 132, 1512
BseGI GGATG 7 cut(s) 562, 1093, 1151, 1201, 1294, 1320, 1508
BseLI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1310, 1404
BseMII CTCAG 1 cut(s) 849
BseNI ACTGG 4 cut(s) 61, 185, 398, 691
BseRI GAGGAG 5 cut(s) 305, 308, 547, 1202, 1205
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 1 cut(s) 129
BseXI GCAGC 8 cut(s) 68, 215, 454, 511, 514, 1269, 1397, 1541
BsgI GTGCAG 2 cut(s) 212, 1548
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 5 cut(s) 77, 118, 131, 212, 259
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 927
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1020, 1155
BslI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1310, 1404
BsmAI GTCTC 3 cut(s) 406, 502, 1137
BsmBI CGTCTC 1 cut(s) 406
BsnI GGCC 5 cut(s) 77, 118, 131, 212, 259
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 932
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 343, 927
Bsp143I GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
Bsp19I CCATGG 1 cut(s) 119
BspANI GGCC 5 cut(s) 77, 118, 131, 212, 259
BspCNI CTCAG 1 cut(s) 848
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 5 cut(s) 76, 77, 117, 236, 1332
BspMAI CTGCAG 4 cut(s) 233, 289, 639, 1387
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 3 cut(s) 34, 1325, 1338
BspQI GCTCTTC 2 cut(s) 1247, 1303
BspT104I TTCGAA 1 cut(s) 932
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 4 cut(s) 61, 185, 398, 691
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 3 cut(s) 119, 132, 1512
BssMI GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
BssNI GRCGYC 1 cut(s) 415
BssSI CACGAG 1 cut(s) 446
BssT1I CCWWGG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 4 cut(s) 214, 1430, 1440, 1590
Bst4CI ACNGT 8 cut(s) 357, 701, 707, 774, 805, 863, 1051, 1516
Bst6I CTCTTC 5 cut(s) 404, 535, 1209, 1247, 1303
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 2 cut(s) 228, 983
BstBAI YACGTR 2 cut(s) 157, 1039
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 5 cut(s) 210, 233, 343, 1104, 1367
BstDEI CTNAG 4 cut(s) 835, 869, 875, 1283
BstDSI CCRYGG 2 cut(s) 119, 1512
BstEII GGTNACC 1 cut(s) 1051
BstF5I GGATG 7 cut(s) 562, 1093, 1151, 1201, 1294, 1320, 1508
BstH2I RGCGCY 1 cut(s) 1391
BstHHI GCGC 1 cut(s) 1390
BstKTI GATC 6 cut(s) 6, 29, 306, 888, 1133, 1333
BstMAI GTCTC 3 cut(s) 406, 502, 1137
BstMBI GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 983, 1155
BstNI CCWGG 4 cut(s) 214, 1430, 1440, 1590
BstNSI RCATGY 1 cut(s) 1588
BstPI GGTNACC 1 cut(s) 1051
BstSCI CCNGG 5 cut(s) 212, 361, 1428, 1438, 1588
BstSFI CTRYAG 5 cut(s) 229, 285, 635, 829, 1383
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 8 cut(s) 68, 215, 454, 511, 514, 1269, 1397, 1541
BstV2I GAAGAC 2 cut(s) 756, 1230
BstX2I RGATCY 1 cut(s) 1330
BstXI CCANNNNNNTGG 1 cut(s) 1575
BstYI RGATCY 1 cut(s) 1330
BstZI CGGCCG 1 cut(s) 129
Bsu36I CCTNAGG 1 cut(s) 1283
BsuRI GGCC 5 cut(s) 77, 118, 131, 212, 259
BtgI CCRYGG 2 cut(s) 119, 1512
BtgZI GCGATG 2 cut(s) 528, 579
BtsCI GGATG 7 cut(s) 562, 1093, 1151, 1201, 1294, 1320, 1508
BtsI GCAGTG 2 cut(s) 282, 1081
BtsIMutI CAGTG 3 cut(s) 282, 770, 1081
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 5 cut(s) 210, 233, 343, 1104, 1367
CaiI CAGNNNCTG 2 cut(s) 97, 1538
CciI TCATGA 1 cut(s) 6
CfoI GCGC 1 cut(s) 1390
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 75, 76, 116
CseI GACGC 1 cut(s) 423
Csp6I GTAC 3 cut(s) 154, 325, 864
CspAI ACCGGT 1 cut(s) 739
CviQI GTAC 3 cut(s) 154, 325, 864
DdeI CTNAG 4 cut(s) 835, 869, 875, 1283
DpnI GATC 6 cut(s) 5, 28, 305, 887, 1132, 1332
DpnII GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
EaeI YGGCCR 2 cut(s) 129, 210
EagI CGGCCG 1 cut(s) 129
Eam1104I CTCTTC 5 cut(s) 404, 535, 1209, 1247, 1303
EarI CTCTTC 5 cut(s) 404, 535, 1209, 1247, 1303
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 925
EclXI CGGCCG 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 119
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 3 cut(s) 79, 343, 927
Eco52I CGGCCG 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 2 cut(s) 128, 750
Eco81I CCTNAGG 1 cut(s) 1283
Eco88I CYCGRG 1 cut(s) 202
Eco91I GGTNACC 1 cut(s) 1051
EcoICRI GAGCTC 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1051
EcoRII CCWGG 4 cut(s) 212, 1428, 1438, 1588
EcoT14I CCWWGG 1 cut(s) 119
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 3 cut(s) 79, 343, 927
ErhI CCWWGG 1 cut(s) 119
Esp3I CGTCTC 1 cut(s) 406
FauI CCCGC 2 cut(s) 93, 729
FauNDI CATATG 1 cut(s) 1504
FbaI TGATCA 3 cut(s) 3, 303, 885
FokI GGATG 7 cut(s) 549, 1100, 1138, 1208, 1301, 1327, 1495
FriOI GRGCYC 3 cut(s) 79, 343, 927
FspBI CTAG 2 cut(s) 1337, 1478
GlaI GCGC 1 cut(s) 1389
HaeII RGCGCY 1 cut(s) 1391
HaeIII GGCC 5 cut(s) 77, 118, 131, 212, 259
HapII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1020, 1155
HgaI GACGC 1 cut(s) 423
HhaI GCGC 1 cut(s) 1390
Hin1I GRCGYC 1 cut(s) 415
Hin6I GCGC 1 cut(s) 1388
HinP1I GCGC 1 cut(s) 1388
HinfI GANTC 8 cut(s) 137, 895, 1160, 1199, 1241, 1394, 1400, 1474
HpaII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1020, 1155
HphI GGTGA 5 cut(s) 470, 729, 1274, 1428, 1528
Hpy166II GTNNAC 1 cut(s) 1519
Hpy188I TCNGA 5 cut(s) 147, 922, 1008, 1399, 1426
Hpy188III TCNNGA 6 cut(s) 7, 268, 446, 1211, 1478, 1576
Hpy8I GTNNAC 1 cut(s) 1519
HpyAV CCTTC 3 cut(s) 106, 666, 939
HpyCH4III ACNGT 8 cut(s) 357, 701, 707, 774, 805, 863, 1051, 1516
HpyCH4IV ACGT 2 cut(s) 156, 1038
HpyF10VI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 983, 1155
HpyF3I CTNAG 4 cut(s) 835, 869, 875, 1283
HpySE526I ACGT 2 cut(s) 156, 1038
Hsp92I GRCGYC 1 cut(s) 415
HspAI GCGC 1 cut(s) 1388
Ksp22I TGATCA 3 cut(s) 3, 303, 885
Kzo9I GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
LguI GCTCTTC 2 cut(s) 1247, 1303
LmnI GCTCC 4 cut(s) 240, 295, 922, 930
Lsp1109I GCAGC 8 cut(s) 68, 215, 454, 511, 514, 1269, 1397, 1541
LweI GCATC 4 cut(s) 616, 986, 1442, 1517
MaeI CTAG 2 cut(s) 1337, 1478
MaeII ACGT 2 cut(s) 156, 1038
MaeIII GTNAC 5 cut(s) 357, 701, 1051, 1262, 1457
MalI GATC 6 cut(s) 5, 28, 305, 887, 1132, 1332
MboI GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
MflI RGATCY 1 cut(s) 1330
MhlI GDGCHC 3 cut(s) 79, 343, 927
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 6 cut(s) 141, 435, 577, 664, 856, 1547
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 5 cut(s) 889, 1169, 1208, 1409, 1483
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 1510
MroXI GAANNNNTTC 1 cut(s) 1420
MscI TGGCCA 1 cut(s) 212
MseI TTAA 4 cut(s) 663, 993, 1361, 1551
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 4 cut(s) 18, 128, 467, 1260
MspI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1020, 1155
MspR9I CCNGG 5 cut(s) 214, 363, 1430, 1440, 1590
MvaI CCWGG 4 cut(s) 214, 1430, 1440, 1590
MwoI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 983, 1155
NciI CCSGG 1 cut(s) 363
NcoI CCATGG 1 cut(s) 119
NdeI CATATG 1 cut(s) 1504
NdeII GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
NlaIV GGNNCC 5 cut(s) 76, 77, 117, 236, 1332
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 1262, 1457
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 1 cut(s) 1588
NspV TTCGAA 1 cut(s) 932
PagI TCATGA 1 cut(s) 6
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 1247, 1303
PdmI GAANNNNTTC 1 cut(s) 1420
PfeI GAWTC 3 cut(s) 137, 1241, 1394
PflMI CCANNNNNTGG 1 cut(s) 1310
PinAI ACCGGT 1 cut(s) 739
PleI GAGTC 5 cut(s) 889, 1168, 1207, 1408, 1482
PpsI GAGTC 5 cut(s) 889, 1168, 1207, 1408, 1482
Ppu21I YACGTR 2 cut(s) 157, 1039
Psp124BI GAGCTC 1 cut(s) 927
Psp6I CCWGG 4 cut(s) 212, 1428, 1438, 1588
PspEI GGTNACC 1 cut(s) 1051
PspGI CCWGG 4 cut(s) 212, 1428, 1438, 1588
PspN4I GGNNCC 5 cut(s) 76, 77, 117, 236, 1332
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 3 cut(s) 75, 76, 116
PstI CTGCAG 4 cut(s) 233, 289, 639, 1387
PstNI CAGNNNCTG 2 cut(s) 97, 1538
PsuI RGATCY 1 cut(s) 1330
RsaI GTAC 3 cut(s) 155, 326, 865
RsaNI GTAC 3 cut(s) 154, 325, 864
RseI CAYNNNNRTG 1 cut(s) 404
SacI GAGCTC 1 cut(s) 927
SapI GCTCTTC 2 cut(s) 1247, 1303
SaqAI TTAA 4 cut(s) 663, 993, 1361, 1551
Sau3AI GATC 6 cut(s) 3, 26, 303, 885, 1130, 1330
Sau96I GGNCC 3 cut(s) 75, 76, 116
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 5 cut(s) 889, 1169, 1208, 1409, 1483
ScrFI CCNGG 5 cut(s) 214, 363, 1430, 1440, 1590
SduI GDGCHC 3 cut(s) 79, 343, 927
SfaNI GCATC 4 cut(s) 616, 986, 1442, 1517
SfcI CTRYAG 5 cut(s) 229, 285, 635, 829, 1383
SfuI TTCGAA 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 266, 1059
SmoI CTYRAG 2 cut(s) 266, 1059
Sse9I AATT 6 cut(s) 141, 435, 577, 664, 856, 1547
SseBI AGGCCT 1 cut(s) 259
SspI AATATT 1 cut(s) 790
SspMI CTAG 2 cut(s) 1337, 1478
SstI GAGCTC 1 cut(s) 927
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 5 cut(s) 212, 361, 1428, 1438, 1588
StyI CCWWGG 1 cut(s) 119
TaaI ACNGT 8 cut(s) 357, 701, 707, 774, 805, 863, 1051, 1516
TaiI ACGT 2 cut(s) 159, 1041
TaqI TCGA 5 cut(s) 309, 568, 881, 932, 1499
TasI AATT 6 cut(s) 141, 435, 577, 664, 856, 1547
TatI WGTACW 1 cut(s) 863
TauI GCSGC 4 cut(s) 56, 131, 222, 467
TfiI GAWTC 3 cut(s) 137, 1241, 1394
Tru1I TTAA 4 cut(s) 663, 993, 1361, 1551
Tru9I TTAA 4 cut(s) 663, 993, 1361, 1551
TscAI CASTG 3 cut(s) 289, 777, 1081
TseFI GTSAC 2 cut(s) 1262, 1457
TseI GCWGC 8 cut(s) 56, 228, 467, 499, 502, 1257, 1385, 1529
Tsp45I GTSAC 2 cut(s) 1262, 1457
TspRI CASTG 3 cut(s) 289, 777, 1081
Van91I CCANNNNNTGG 1 cut(s) 1310
XapI RAATTY 1 cut(s) 1547
XbaI TCTAGA 1 cut(s) 1477
XceI RCATGY 1 cut(s) 1588
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XmnI GAANNNNTTC 1 cut(s) 1420
XspI CTAG 2 cut(s) 1337, 1478
ZrmI AGTACT 1 cut(s) 865
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.