MD09G1109900.v1.1
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0014534
Physical Location & Seq
Reverse (-)
8158283 .. 8162673
4391 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1109900.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGATAATCAACAACAGCGGAGTTATGGACAGAGTTTATGAGACGGCGGTAGGAGCTCAGAGAGGCGGCTCCCACCACCACCACCACCATCACCAGCGGGGCCTCAAGAAGGGGCCCTGGACGGGAGCAGAGGACGCGATTTTGGTAGAGTACGTGAAGAAGCACGGAGAGGGAAACTGGAACGCGGTGCAGAAGAATTCAGGGCTTGCTAGATGCGGTAAGAGCTGCAGGCTCAGATGGGCAAACCATCTGAGGCCTAATCTCAAGAAAGGTTCGCTCTCGCCTGAGGAGGAGAGACTCATCATCGAGCTTCACGCTAAGTTCGGCAACAAATGGGCTCGCATGGCTTCTCAGTTACCCGGCAGGACTGACAATGAAATAAAGAATTACTGGAATACTAGAATGAAGCGTCGCCAGAGAGCCGGTTTACCAGTTTACCCTCATGACCTTCAACAAGAAGCAGCGGCTGCAGCCTTCCACCACCAACACCAACTTAGACATTCTTCTTCGTCTCCTGCTTCTTCATTCTCATCACTCTTCTCTTCCTCTCACCCTCGGAAACCTAACAGTTTCTGTCCCTCGCAGCTTTCTCTTTACGACCACATCACAAGTACTTTCTCCTCCACATCAGACCACCAAAACCCTAATAACAATTACTTTCTTCAAAACCACCACCACAATTCTTCTTCTCTTTACTCCAATCCCATGACTCAATTCCATGGAAATGGTGGCTTTGCTATGCCTTTGTCCCCCGTTTCTCCATTCGGGTCTTCAGCTCTCTTCAACCAGAGCAACATTCCAAACCAAACCCTAATAGGTCAGTACAATTCTCATGGAGGGTTTGGTGGTTACAATAATCTTAGTCTGAGCTCCATGATCATGGGGCCTCCTACTTATGACCCAACCCCTTTGGTTCAAGGGTCCAATCCAGAGCTCCCTTCCAACCAAACACCGCTGAGTATTAATGGCGGCAGCGAGGGTCAGATGGGGGGCTCAGGCTATACCGCTAATGAAGATCACTATGAAATTGCACCAGTGCCGTCCCAAGGGAATAGTGGCCTTTTGGATGATGTTTTGGTGGAGGCTCAGAATATATCGAATAAGAAAGCAAAGAGTGGCGACAGCTGTTCGTCAGGGTGGTCCGGTCAAGAGAAAGGTCTTATGGTGGAAGAGGAGGAGGAGGAAGAGTCTGCTGAGGAGGAAGCCGAAGACACCGTGCAGGTCGAATCAACTTTGAAGAATAGCGGCGAGAATAGTGCTGAAAATCAGAGGGGTGGCAGCTCCTCTCTGTCATCAATTGGCATGATACAAAATGAGGATCCATTAGAGGAGATGGATGATGACTTGTTGAGCCTGCTAAACTTTCCCTCCACAATGCCTGCAGTGTCTGAGTCATGGTACGCGCAGGGATGCATGTCTAACCGGGCATCGATGTCAGGCGTGAGTACTAGTGACAATGTGAGTCTAGAGATAGCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

494

Amino Acids

53.82

Weight (kDa)

5.87

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 37 - 84 6.3e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 40 - 99 2.7e-11 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 90 - 133 1e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 94 - 136 3.4e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1210
AccII CGCG 3 cut(s) 137, 185, 1403
AclWI GGATC 2 cut(s) 1313, 1326
AcsI RAATTY 1 cut(s) 196
AcuI CTGAAG 1 cut(s) 756
AfaI GTAC 5 cut(s) 152, 613, 824, 1400, 1447
AfiI CCNNNNNNNGG 3 cut(s) 109, 122, 1046
AgsI TTSAA 5 cut(s) 452, 665, 784, 917, 1237
AhlI ACTAGT 1 cut(s) 1448
AjnI CCWGG 1 cut(s) 116
AluBI AGCT 9 cut(s) 56, 225, 310, 586, 776, 870, 934, 1125, 1281
AluI AGCT 9 cut(s) 56, 225, 310, 586, 776, 870, 934, 1125, 1281
Alw21I GWGCWC 3 cut(s) 58, 872, 936
Alw26I GTCTC 3 cut(s) 35, 289, 516
AlwI GGATC 2 cut(s) 1313, 1326
AlwNI CAGNNNCTG 3 cut(s) 467, 573, 1388
AoxI GGCC 5 cut(s) 100, 113, 254, 884, 1057
ApaI GGGCCC 1 cut(s) 117
ApeKI GCWGC 7 cut(s) 225, 461, 467, 470, 583, 972, 1278
ApoI RAATTY 1 cut(s) 196
AseI ATTAAT 1 cut(s) 963
AspLEI GCGC 1 cut(s) 1405
AspS9I GGNCC 6 cut(s) 100, 113, 114, 884, 921, 1140
AsuC2I CCSGG 2 cut(s) 360, 1424
AsuHPI GGTGA 2 cut(s) 83, 542
AvaII GGWCC 2 cut(s) 921, 1140
AxyI CCTNAGG 1 cut(s) 285
BaeGI GKGCMC 1 cut(s) 117
BamHI GGATCC 1 cut(s) 1318
BanII GRGCYC 6 cut(s) 58, 117, 340, 872, 936, 995
BbsI GAAGAC 2 cut(s) 762, 1215
Bbv12I GWGCWC 3 cut(s) 58, 872, 936
BbvCI CCTCAGC 1 cut(s) 1194
BbvI GCAGC 7 cut(s) 212, 454, 473, 482, 595, 984, 1290
BccI CCATC 5 cut(s) 96, 231, 255, 979, 1327
BceAI ACGGC 2 cut(s) 60, 1024
BcgI CGANNNNNNTGC 2 cut(s) 1238, 1272
BciT130I CCWGG 1 cut(s) 118
BclI TGATCA 1 cut(s) 876
BcnI CCSGG 2 cut(s) 360, 1424
BcoDI GTCTC 3 cut(s) 35, 289, 516
BcuI ACTAGT 1 cut(s) 1448
BfaI CTAG 4 cut(s) 210, 399, 1449, 1466
BfmI CTRYAG 3 cut(s) 226, 468, 1380
BfuAI ACCTGC 1 cut(s) 1210
BmcAI AGTACT 2 cut(s) 613, 1447
Bme1390I CCNGG 3 cut(s) 118, 360, 1424
Bme18I GGWCC 2 cut(s) 921, 1140
BmgT120I GGNCC 6 cut(s) 100, 113, 114, 884, 921, 1140
BmiI GGNNCC 7 cut(s) 70, 101, 114, 115, 885, 922, 1320
BmrFI CCNGG 3 cut(s) 118, 360, 1424
BmsI GCATC 3 cut(s) 203, 1400, 1436
BpiI GAAGAC 2 cut(s) 762, 1215
Bpu10I CCTNAGC 2 cut(s) 994, 1194
BpuEI CTTGAG 2 cut(s) 89, 248
BpuMI CCSGG 2 cut(s) 360, 1424
Bsa29I ATCGAT 1 cut(s) 1430
BsaAI YACGTR 1 cut(s) 154
BsaJI CCNNGG 4 cut(s) 116, 554, 718, 1045
BsaWI WCCGGW 1 cut(s) 1142
BsaXI ACNNNNNCTCC 4 cut(s) 1172, 1202, 1352, 1382
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 122, 1046
Bse118I RCCGGY 1 cut(s) 422
Bse1I ACTGG 4 cut(s) 182, 395, 431, 1034
Bse21I CCTNAGG 1 cut(s) 285
BseBI CCWGG 1 cut(s) 118
BseCI ATCGAT 1 cut(s) 1430
BseDI CCNNGG 4 cut(s) 116, 554, 718, 1045
BseGI GGATG 3 cut(s) 1072, 1342, 1415
BseLI CCNNNNNNNGG 3 cut(s) 109, 122, 1046
BseNI ACTGG 4 cut(s) 182, 395, 431, 1034
BseRI GAGGAG 9 cut(s) 302, 305, 610, 1187, 1190, 1193, 1211, 1273, 1343
BseSI GKGCMC 1 cut(s) 117
BseXI GCAGC 7 cut(s) 212, 454, 473, 482, 595, 984, 1290
BsgI GTGCAG 2 cut(s) 209, 1238
Bsh1236I CGCG 3 cut(s) 137, 185, 1403
BshFI GGCC 5 cut(s) 102, 115, 256, 886, 1059
BshVI ATCGAT 1 cut(s) 1430
BsiHKAI GWGCWC 3 cut(s) 58, 872, 936
BsiSI CCGG 4 cut(s) 360, 423, 1143, 1423
BslFI GGGAC 3 cut(s) 561, 733, 1027
BslI CCNNNNNNNGG 3 cut(s) 109, 122, 1046
BsmAI GTCTC 3 cut(s) 35, 289, 516
BsmBI CGTCTC 2 cut(s) 35, 516
BsmFI GGGAC 3 cut(s) 561, 733, 1027
BsnI GGCC 5 cut(s) 102, 115, 256, 886, 1059
Bsp120I GGGCCC 1 cut(s) 113
Bsp1286I GDGCHC 6 cut(s) 58, 117, 340, 872, 936, 995
Bsp143I GATC 3 cut(s) 876, 1015, 1318
Bsp19I CCATGG 1 cut(s) 718
BspANI GGCC 5 cut(s) 102, 115, 256, 886, 1059
BspDI ATCGAT 1 cut(s) 1430
BspFNI CGCG 3 cut(s) 137, 185, 1403
BspHI TCATGA 1 cut(s) 442
BspLI GGNNCC 7 cut(s) 70, 101, 114, 115, 885, 922, 1320
BspMAI CTGCAG 3 cut(s) 230, 472, 1384
BspMI ACCTGC 1 cut(s) 1210
BspPI GGATC 2 cut(s) 1313, 1326
BsrFI RCCGGY 1 cut(s) 422
BsrI ACTGG 4 cut(s) 182, 395, 431, 1034
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 4 cut(s) 116, 554, 718, 1045
BssMI GATC 3 cut(s) 876, 1015, 1318
BssT1I CCWWGG 2 cut(s) 718, 1045
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 2 cut(s) 569, 1216
Bst6I CTCTTC 5 cut(s) 542, 547, 785, 1164, 1179
BstAPI GCANNNNNTGC 1 cut(s) 467
BstBAI YACGTR 1 cut(s) 154
BstC8I GCNNGC 5 cut(s) 207, 230, 340, 1355, 1380
BstDSI CCRYGG 1 cut(s) 718
BstENI CCTNNNNNAGG 1 cut(s) 107
BstF5I GGATG 3 cut(s) 1072, 1342, 1415
BstFNI CGCG 3 cut(s) 137, 185, 1403
BstHHI GCGC 1 cut(s) 1405
BstKTI GATC 3 cut(s) 879, 1018, 1321
BstMAI GTCTC 3 cut(s) 35, 289, 516
BstMBI GATC 3 cut(s) 876, 1015, 1318
BstMWI GCNNNNNNNGC 6 cut(s) 53, 134, 222, 344, 467, 470
BstNI CCWGG 1 cut(s) 118
BstNSI RCATGY 1 cut(s) 1417
BstSCI CCNGG 3 cut(s) 116, 358, 1422
BstSFI CTRYAG 3 cut(s) 226, 468, 1380
BstSLI GKGCMC 1 cut(s) 117
BstUI CGCG 3 cut(s) 137, 185, 1403
BstV1I GCAGC 7 cut(s) 212, 454, 473, 482, 595, 984, 1290
BstV2I GAAGAC 2 cut(s) 762, 1215
BstX2I RGATCY 1 cut(s) 1318
BstXI CCANNNNNNTGG 2 cut(s) 725, 880
BstYI RGATCY 1 cut(s) 1318
Bsu15I ATCGAT 1 cut(s) 1430
Bsu36I CCTNAGG 1 cut(s) 285
BsuRI GGCC 5 cut(s) 102, 115, 256, 886, 1059
BsuTUI ATCGAT 1 cut(s) 1430
BtgI CCRYGG 1 cut(s) 718
BtsCI GGATG 3 cut(s) 1072, 1342, 1415
BtsI GCAGTG 1 cut(s) 1389
BtsIMutI CAGTG 2 cut(s) 1041, 1389
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 5 cut(s) 207, 230, 340, 1355, 1380
CaiI CAGNNNCTG 3 cut(s) 467, 573, 1388
CciI TCATGA 1 cut(s) 442
CfoI GCGC 1 cut(s) 1405
Cfr10I RCCGGY 1 cut(s) 422
Cfr13I GGNCC 6 cut(s) 100, 113, 114, 884, 921, 1140
ClaI ATCGAT 1 cut(s) 1430
CseI GACGC 2 cut(s) 143, 398
Csp6I GTAC 5 cut(s) 151, 612, 823, 1399, 1446
CviQI GTAC 5 cut(s) 151, 612, 823, 1399, 1446
DpnI GATC 3 cut(s) 878, 1017, 1320
DpnII GATC 3 cut(s) 876, 1015, 1318
Eam1104I CTCTTC 5 cut(s) 542, 547, 785, 1164, 1179
EarI CTCTTC 5 cut(s) 542, 547, 785, 1164, 1179
Ecl136II GAGCTC 3 cut(s) 56, 870, 934
Eco130I CCWWGG 2 cut(s) 718, 1045
Eco147I AGGCCT 1 cut(s) 256
Eco24I GRGCYC 6 cut(s) 58, 117, 340, 872, 936, 995
Eco47I GGWCC 2 cut(s) 921, 1140
Eco53kI GAGCTC 3 cut(s) 56, 870, 934
Eco57I CTGAAG 1 cut(s) 756
Eco81I CCTNAGG 1 cut(s) 285
EcoICRI GAGCTC 3 cut(s) 56, 870, 934
EcoNI CCTNNNNNAGG 1 cut(s) 107
EcoO109I RGGNCCY 4 cut(s) 100, 113, 114, 884
EcoRI GAATTC 1 cut(s) 196
EcoRII CCWGG 1 cut(s) 116
EcoT14I CCWWGG 2 cut(s) 718, 1045
EcoT22I ATGCAT 1 cut(s) 1415
EcoT38I GRGCYC 6 cut(s) 58, 117, 340, 872, 936, 995
ErhI CCWWGG 2 cut(s) 718, 1045
Esp3I CGTCTC 2 cut(s) 35, 516
FaqI GGGAC 3 cut(s) 561, 733, 1027
FauI CCCGC 1 cut(s) 90
FbaI TGATCA 1 cut(s) 876
FokI GGATG 3 cut(s) 1079, 1349, 1422
FriOI GRGCYC 6 cut(s) 58, 117, 340, 872, 936, 995
FspBI CTAG 4 cut(s) 210, 399, 1449, 1466
GlaI GCGC 1 cut(s) 1404
HaeIII GGCC 5 cut(s) 102, 115, 256, 886, 1059
HapII CCGG 4 cut(s) 360, 423, 1143, 1423
HgaI GACGC 2 cut(s) 143, 398
HhaI GCGC 1 cut(s) 1405
Hin6I GCGC 1 cut(s) 1403
HinP1I GCGC 1 cut(s) 1403
HinfI GANTC 6 cut(s) 297, 709, 1187, 1226, 1391, 1462
HpaII CCGG 4 cut(s) 360, 423, 1143, 1423
HphI GGTGA 2 cut(s) 83, 542
Hpy166II GTNNAC 2 cut(s) 428, 436
Hpy188III TCNNGA 6 cut(s) 106, 265, 443, 929, 1148, 1466
Hpy8I GTNNAC 2 cut(s) 428, 436
Hpy99I CGWCG 1 cut(s) 414
HpyAV CCTTC 4 cut(s) 103, 458, 484, 948
HpyCH4III ACNGT 2 cut(s) 569, 1216
HpyCH4IV ACGT 1 cut(s) 153
HpyCH4V TGCA 7 cut(s) 190, 228, 470, 1031, 1219, 1382, 1413
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 134, 222, 344, 467, 470
HpySE526I ACGT 1 cut(s) 153
HspAI GCGC 1 cut(s) 1403
Ksp22I TGATCA 1 cut(s) 876
Kzo9I GATC 3 cut(s) 876, 1015, 1318
LmnI GCTCC 6 cut(s) 53, 74, 125, 875, 939, 1286
Lsp1109I GCAGC 7 cut(s) 212, 454, 473, 482, 595, 984, 1290
LweI GCATC 3 cut(s) 203, 1400, 1436
MaeI CTAG 4 cut(s) 210, 399, 1449, 1466
MaeII ACGT 1 cut(s) 153
MaeIII GTNAC 3 cut(s) 354, 848, 1451
MalI GATC 3 cut(s) 878, 1017, 1320
MboI GATC 3 cut(s) 876, 1015, 1318
MfeI CAATTG 1 cut(s) 1296
MflI RGATCY 1 cut(s) 1318
MhlI GDGCHC 6 cut(s) 58, 117, 340, 872, 936, 995
MluCI AATT 8 cut(s) 196, 385, 652, 679, 713, 826, 1026, 1296
MlyI GAGTC 5 cut(s) 291, 703, 1196, 1400, 1471
MmeI TCCRAC 1 cut(s) 966
Mph1103I ATGCAT 1 cut(s) 1415
MseI TTAA 1 cut(s) 963
MslI CAYNNNNRTG 2 cut(s) 723, 878
MspA1I CMGCKG 5 cut(s) 18, 97, 464, 955, 1125
MspI CCGG 4 cut(s) 360, 423, 1143, 1423
MspR9I CCNGG 3 cut(s) 118, 360, 1424
MunI CAATTG 1 cut(s) 1296
MvaI CCWGG 1 cut(s) 118
MvnI CGCG 3 cut(s) 137, 185, 1403
MwoI GCNNNNNNNGC 6 cut(s) 53, 134, 222, 344, 467, 470
NciI CCSGG 2 cut(s) 360, 1424
NcoI CCATGG 1 cut(s) 718
NdeII GATC 3 cut(s) 876, 1015, 1318
NlaIV GGNNCC 7 cut(s) 70, 101, 114, 115, 885, 922, 1320
NmuCI GTSAC 1 cut(s) 1451
NsiI ATGCAT 1 cut(s) 1415
NspI RCATGY 1 cut(s) 1417
PagI TCATGA 1 cut(s) 442
PceI AGGCCT 1 cut(s) 256
PfeI GAWTC 1 cut(s) 1226
PleI GAGTC 5 cut(s) 291, 703, 1195, 1399, 1470
PpsI GAGTC 5 cut(s) 291, 703, 1195, 1399, 1470
Ppu21I YACGTR 1 cut(s) 154
PshBI ATTAAT 1 cut(s) 963
Psp124BI GAGCTC 3 cut(s) 58, 872, 936
Psp6I CCWGG 1 cut(s) 116
PspGI CCWGG 1 cut(s) 116
PspN4I GGNNCC 7 cut(s) 70, 101, 114, 115, 885, 922, 1320
PspOMI GGGCCC 1 cut(s) 113
PspPI GGNCC 6 cut(s) 100, 113, 114, 884, 921, 1140
PstI CTGCAG 3 cut(s) 230, 472, 1384
PstNI CAGNNNCTG 3 cut(s) 467, 573, 1388
PsuI RGATCY 1 cut(s) 1318
PvuII CAGCTG 1 cut(s) 1125
RsaI GTAC 5 cut(s) 152, 613, 824, 1400, 1447
RsaNI GTAC 5 cut(s) 151, 612, 823, 1399, 1446
RseI CAYNNNNRTG 2 cut(s) 723, 878
SacI GAGCTC 3 cut(s) 58, 872, 936
SaqAI TTAA 1 cut(s) 963
Sau3AI GATC 3 cut(s) 876, 1015, 1318
Sau96I GGNCC 6 cut(s) 100, 113, 114, 884, 921, 1140
ScaI AGTACT 2 cut(s) 613, 1447
SchI GAGTC 5 cut(s) 291, 703, 1196, 1400, 1471
ScrFI CCNGG 3 cut(s) 118, 360, 1424
SduI GDGCHC 6 cut(s) 58, 117, 340, 872, 936, 995
SfaNI GCATC 3 cut(s) 203, 1400, 1436
SfcI CTRYAG 3 cut(s) 226, 468, 1380
SinI GGWCC 2 cut(s) 921, 1140
SmiMI CAYNNNNRTG 2 cut(s) 723, 878
SmlI CTYRAG 2 cut(s) 104, 263
SmoI CTYRAG 2 cut(s) 104, 263
SpeI ACTAGT 1 cut(s) 1448
Sse9I AATT 8 cut(s) 196, 385, 652, 679, 713, 826, 1026, 1296
SseBI AGGCCT 1 cut(s) 256
SspMI CTAG 4 cut(s) 210, 399, 1449, 1466
SstI GAGCTC 3 cut(s) 58, 872, 936
StuI AGGCCT 1 cut(s) 256
StyD4I CCNGG 3 cut(s) 116, 358, 1422
StyI CCWWGG 2 cut(s) 718, 1045
TaaI ACNGT 2 cut(s) 569, 1216
TaiI ACGT 1 cut(s) 156
TaqI TCGA 4 cut(s) 306, 1097, 1224, 1430
TasI AATT 8 cut(s) 196, 385, 652, 679, 713, 826, 1026, 1296
TatI WGTACW 3 cut(s) 611, 822, 1445
TauI GCSGC 4 cut(s) 69, 467, 972, 1248
TfiI GAWTC 1 cut(s) 1226
Tru1I TTAA 1 cut(s) 963
Tru9I TTAA 1 cut(s) 963
TscAI CASTG 2 cut(s) 1041, 1389
TseFI GTSAC 1 cut(s) 1451
TseI GCWGC 7 cut(s) 225, 461, 467, 470, 583, 972, 1278
Tsp45I GTSAC 1 cut(s) 1451
TspDTI ATGAA 5 cut(s) 390, 419, 513, 1026, 1038
TspGWI ACGGA 1 cut(s) 180
TspRI CASTG 2 cut(s) 1041, 1389
VpaK11BI GGWCC 2 cut(s) 921, 1140
VspI ATTAAT 1 cut(s) 963
XagI CCTNNNNNAGG 1 cut(s) 107
XapI RAATTY 1 cut(s) 196
XbaI TCTAGA 1 cut(s) 1465
XceI RCATGY 1 cut(s) 1417
XcmI CCANNNNNNNNNTGG 2 cut(s) 725, 1052
XspI CTAG 4 cut(s) 210, 399, 1449, 1466
ZrmI AGTACT 2 cut(s) 613, 1447
Zsp2I ATGCAT 1 cut(s) 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.