Rh2BG553800
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0014534
Physical Location & Seq
Forward (+)
76187464 .. 76190797
3334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG553800.1

Sequence Viewer

Length: 1587 bp
ATGATCATGAGCAACAGCAGAGATGGATCAATGGACTTGAACGAGATGGTTACGGCCGCCCAGTTAGGAGGTGGGGCCCACCAGCTTCATCAGCCCCTGCGGGGGCTGAAGAAGGGGCCGTGGACAGCGGCCGAGGATTCAATTCTGATGGAGTACGTGAAGAAACACGGCGAGGGGAACTGGAACGCCGTGCAGAAGAACTCGGGGCTGGCCAGGTGCGGCAAGAGCTGCAGGCTCCGGTGGGCTAACCATTTGAGGCCTAATCTCAAGAAAGGCTCTCTCACTGCAGAGGAGGAGCGAATGATCATCGAACTTCATGCCAAGTACGGCAACAAATGGGCTCGCATGGCTTCTCAGTTACCCGGTAGGACTGACAACGAGATAAAGAACTACTGGAACACCAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATCTACCCTCACGAGCTTCAACATGAAGCCGCTGCTTCATTTCACCACCAACAAGCTCATCATCAGCAGCAGAGGCATAACTCAAACTCGTCCTCTTCTTCATTTTCATCGCTCCTTTCCTCCTCGCATCCTCGAAAAGCAAATTACAGCTCTACCCCATCGCTCTCTCTTTATGACCACATCAGTTTTGATGCCTCTCTGCAGAACCAACGCAACTCTCCTTCTCTTAATTACTCCAACTCCGCCATGACGACCCAGTTCAACGGTAACGGTGGCTTTGCTATCCCGCTATCTCCGGTTTCACCGGTTTCCCCATTTGGGTCATCGTCTTCAGCACTGTTCAACCAAACCATTTTGCCAACTCCATCTCAATACTACAACTCAGGTCATGGAGGTTTTGGCAATTACAGTACTCTTAGCCTTAGCTCGATGATCATGGGGACACCTACTTATGAGCCAATGAACTCGGAGCTCCCTTCGAACCAAACACCACCATACTCGCCATACACCCCCACGAAACCTGCTTTTTCTGCTAACTTTAATGGCGGTGAGGGTCTGATGGAGGCTTCCGGCAACACCAATGGCTATGAGATTGAAACGGTAACCTCTCAAGGAAAGAGAGGCAGTGGTCTGCTGGATGATGTGTTGGTGCAAGCTGATGTAATTTGTGGGAACAAGAGATCAAGGAGTGGAGACAGCTCATCCGGCGAGTCAGGGAAAGACAAATATATAGTGGAGGAGGAGGATGAGTCTGCTGGTCAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGCGGTGACAATAGTGCTGAAAACCTAAGGGATGGTAGCTCTTCTCCGTCAGTTGGGATGAAACCAAGTGAGGATCCACTAGAGGATATGGACGATGACTTGTTAAGCCTACTCAACTTCCAATCTGCAGCGCCAGAATCCGAGTCCTGGTACGGGGGAAGCATATCTGACCAGGCATCACCAGGCATGAATGGTGCAAGTGACAATAATAATGTGAGTCTAGACATTCGGCAAAACACATCGACATATGCATCCACGGTGAACATGAGTGCAACAGAACCTGATGATGAAGTTAAGCGCAGCCTTCCTCCATGCTTCTGGAACAACATGCCTGGCATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

528

Amino Acids

57.55

Weight (kDa)

5.37

Isoelectric Point (pI)

56.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 38 - 85 1.5e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 41 - 101 7.7e-12 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 91 - 134 1.4e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 138 2.5e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 964
AciI CCGC 9 cut(s) 57, 100, 128, 219, 465, 678, 722, 981, 1245
AclWI GGATC 3 cut(s) 34, 1310, 1323
AcoI YGGCCR 3 cut(s) 54, 129, 210
AcuI CTGAAG 2 cut(s) 128, 750
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 4 cut(s) 155, 326, 847, 1394
AfiI CCNNNNNNNGG 6 cut(s) 101, 102, 753, 1295, 1389, 1395
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 6 cut(s) 40, 141, 455, 697, 778, 1031
AjnI CCWGG 5 cut(s) 212, 1388, 1413, 1423, 1573
Alw21I GWGCWC 1 cut(s) 909
Alw26I GTCTC 2 cut(s) 406, 1122
AlwI GGATC 3 cut(s) 34, 1310, 1323
AlwNI CAGNNNCTG 2 cut(s) 97, 1523
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 6 cut(s) 54, 75, 116, 129, 210, 257
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 6 cut(s) 228, 467, 502, 1242, 1370, 1542
AsiGI ACCGGT 1 cut(s) 739
AspLEI GCGC 2 cut(s) 1375, 1542
AspS9I GGNCC 3 cut(s) 75, 76, 116
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 6 cut(s) 470, 729, 995, 1259, 1413, 1513
AsuII TTCGAA 1 cut(s) 914
AvaI CYCGRG 1 cut(s) 202
AxyI CCTNAGG 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 1 cut(s) 1315
BanII GRGCYC 3 cut(s) 79, 343, 909
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 2 cut(s) 756, 1215
Bbv12I GWGCWC 1 cut(s) 909
BbvI GCAGC 6 cut(s) 215, 454, 514, 1254, 1382, 1554
BccI CCATC 7 cut(s) 17, 40, 142, 601, 808, 988, 1268
BceAI ACGGC 5 cut(s) 69, 103, 173, 184, 343
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 5 cut(s) 214, 1390, 1415, 1425, 1575
BclI TGATCA 3 cut(s) 3, 303, 867
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 2 cut(s) 406, 1122
BfaI CTAG 2 cut(s) 1322, 1463
BfmI CTRYAG 4 cut(s) 229, 285, 635, 1368
BfoI RGCGCY 1 cut(s) 1376
BfuAI ACCTGC 1 cut(s) 964
BmcAI AGTACT 1 cut(s) 847
Bme1390I CCNGG 6 cut(s) 214, 363, 1390, 1415, 1425, 1575
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 75, 76, 116
BmiI GGNNCC 5 cut(s) 76, 77, 117, 236, 1317
BmrFI CCNGG 6 cut(s) 214, 363, 1390, 1415, 1425, 1575
BmrI ACTGGG 2 cut(s) 55, 685
BmsI GCATC 4 cut(s) 571, 616, 1427, 1502
BmuI ACTGGG 2 cut(s) 55, 685
BpiI GAAGAC 2 cut(s) 756, 1215
Bpu10I CCTNAGC 1 cut(s) 857
Bpu14I TTCGAA 1 cut(s) 914
BpuEI CTTGAG 2 cut(s) 251, 1029
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 1 cut(s) 157
BsaHI GRCGYC 1 cut(s) 415
BsaJI CCNNGG 3 cut(s) 119, 132, 1497
BsaWI WCCGGW 3 cut(s) 237, 730, 739
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1169, 1199
Bsc4I CCNNNNNNNGG 6 cut(s) 101, 102, 753, 1295, 1389, 1395
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 4 cut(s) 61, 185, 398, 691
Bse21I CCTNAGG 1 cut(s) 1268
BseBI CCWGG 5 cut(s) 214, 1390, 1415, 1425, 1575
BseDI CCNNGG 3 cut(s) 119, 132, 1497
BseGI GGATG 7 cut(s) 562, 1078, 1136, 1186, 1279, 1305, 1493
BseLI CCNNNNNNNGG 6 cut(s) 101, 102, 753, 1295, 1389, 1395
BseMII CTCAG 2 cut(s) 368, 831
BseNI ACTGG 4 cut(s) 61, 185, 398, 691
BseRI GAGGAG 5 cut(s) 305, 308, 547, 1187, 1190
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 2 cut(s) 54, 129
BseXI GCAGC 6 cut(s) 215, 454, 514, 1254, 1382, 1554
BsgI GTGCAG 1 cut(s) 212
Bsh1285I CGRYCG 2 cut(s) 57, 132
BshFI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 2 cut(s) 57, 132
BsiHKAI GWGCWC 1 cut(s) 909
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1005, 1140
BslFI GGGAC 1 cut(s) 889
BslI CCNNNNNNNGG 6 cut(s) 101, 102, 753, 1295, 1389, 1395
BsmAI GTCTC 2 cut(s) 406, 1122
BsmBI CGTCTC 1 cut(s) 406
BsmFI GGGAC 1 cut(s) 889
BsnI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 914
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 343, 909
Bsp143I GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
BspACI CCGC 9 cut(s) 57, 100, 128, 219, 465, 678, 722, 981, 1245
BspANI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BspCNI CTCAG 2 cut(s) 367, 830
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 5 cut(s) 76, 77, 117, 236, 1317
BspMAI CTGCAG 4 cut(s) 233, 289, 639, 1372
BspMI ACCTGC 1 cut(s) 964
BspPI GGATC 3 cut(s) 34, 1310, 1323
BspQI GCTCTTC 2 cut(s) 1232, 1288
BspT104I TTCGAA 1 cut(s) 914
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 4 cut(s) 61, 185, 398, 691
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 3 cut(s) 119, 132, 1497
BssMI GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
BssNI GRCGYC 1 cut(s) 415
BssSI CACGAG 1 cut(s) 446
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 5 cut(s) 214, 1390, 1415, 1425, 1575
Bst4CI ACNGT 6 cut(s) 701, 707, 774, 845, 1036, 1501
Bst6I CTCTTC 5 cut(s) 404, 535, 1194, 1232, 1288
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 157
BstBI TTCGAA 1 cut(s) 914
BstC8I GCNNGC 4 cut(s) 210, 233, 343, 1089
BstDEI CTNAG 5 cut(s) 354, 817, 851, 857, 1268
BstDSI CCRYGG 2 cut(s) 119, 1497
BstEII GGTNACC 1 cut(s) 1036
BstF5I GGATG 7 cut(s) 562, 1078, 1136, 1186, 1279, 1305, 1493
BstH2I RGCGCY 1 cut(s) 1376
BstHHI GCGC 2 cut(s) 1375, 1542
BstKTI GATC 6 cut(s) 6, 29, 306, 870, 1118, 1318
BstMAI GTCTC 2 cut(s) 406, 1122
BstMBI GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
BstMCI CGRYCG 2 cut(s) 57, 132
BstMWI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 965, 1140
BstNI CCWGG 5 cut(s) 214, 1390, 1415, 1425, 1575
BstNSI RCATGY 1 cut(s) 1573
BstPI GGTNACC 1 cut(s) 1036
BstSCI CCNGG 6 cut(s) 212, 361, 1388, 1413, 1423, 1573
BstSFI CTRYAG 4 cut(s) 229, 285, 635, 1368
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 6 cut(s) 215, 454, 514, 1254, 1382, 1554
BstV2I GAAGAC 2 cut(s) 756, 1215
BstX2I RGATCY 1 cut(s) 1315
BstXI CCANNNNNNTGG 1 cut(s) 1560
BstYI RGATCY 1 cut(s) 1315
BstZI CGGCCG 2 cut(s) 54, 129
Bsu36I CCTNAGG 1 cut(s) 1268
BsuRI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BtgI CCRYGG 2 cut(s) 119, 1497
BtgZI GCGATG 2 cut(s) 528, 579
BtsCI GGATG 7 cut(s) 562, 1078, 1136, 1186, 1279, 1305, 1493
BtsI GCAGTG 2 cut(s) 282, 1066
BtsIMutI CAGTG 3 cut(s) 282, 770, 1066
BveI ACCTGC 1 cut(s) 964
Cac8I GCNNGC 4 cut(s) 210, 233, 343, 1089
CaiI CAGNNNCTG 2 cut(s) 97, 1523
CciI TCATGA 1 cut(s) 6
CfoI GCGC 2 cut(s) 1375, 1542
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 75, 76, 116
CseI GACGC 1 cut(s) 423
Csp6I GTAC 4 cut(s) 154, 325, 846, 1393
CspAI ACCGGT 1 cut(s) 739
CviQI GTAC 4 cut(s) 154, 325, 846, 1393
DdeI CTNAG 5 cut(s) 354, 817, 851, 857, 1268
DpnI GATC 6 cut(s) 5, 28, 305, 869, 1117, 1317
DpnII GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
EaeI YGGCCR 3 cut(s) 54, 129, 210
EagI CGGCCG 2 cut(s) 54, 129
Eam1104I CTCTTC 5 cut(s) 404, 535, 1194, 1232, 1288
EarI CTCTTC 5 cut(s) 404, 535, 1194, 1232, 1288
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 907
EclXI CGGCCG 2 cut(s) 54, 129
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 3 cut(s) 79, 343, 909
Eco52I CGGCCG 2 cut(s) 54, 129
Eco53kI GAGCTC 1 cut(s) 907
Eco57I CTGAAG 2 cut(s) 128, 750
Eco81I CCTNAGG 1 cut(s) 1268
Eco88I CYCGRG 1 cut(s) 202
Eco91I GGTNACC 1 cut(s) 1036
EcoICRI GAGCTC 1 cut(s) 907
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1036
EcoRII CCWGG 5 cut(s) 212, 1388, 1413, 1423, 1573
EcoT22I ATGCAT 1 cut(s) 1495
EcoT38I GRGCYC 3 cut(s) 79, 343, 909
Esp3I CGTCTC 1 cut(s) 406
FaqI GGGAC 1 cut(s) 889
FauI CCCGC 2 cut(s) 93, 729
FauNDI CATATG 1 cut(s) 1489
FbaI TGATCA 3 cut(s) 3, 303, 867
FokI GGATG 7 cut(s) 549, 1085, 1123, 1193, 1286, 1312, 1480
FriOI GRGCYC 3 cut(s) 79, 343, 909
FspBI CTAG 2 cut(s) 1322, 1463
GlaI GCGC 2 cut(s) 1374, 1541
HaeII RGCGCY 1 cut(s) 1376
HaeIII GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
HapII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1005, 1140
HgaI GACGC 1 cut(s) 423
HhaI GCGC 2 cut(s) 1375, 1542
Hin1I GRCGYC 1 cut(s) 415
Hin6I GCGC 2 cut(s) 1373, 1540
HinP1I GCGC 2 cut(s) 1373, 1540
HinfI GANTC 7 cut(s) 137, 1145, 1184, 1226, 1379, 1385, 1459
HpaII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1005, 1140
HphI GGTGA 6 cut(s) 470, 729, 995, 1259, 1413, 1513
Hpy166II GTNNAC 2 cut(s) 123, 1504
Hpy188I TCNGA 5 cut(s) 147, 904, 993, 1384, 1411
Hpy188III TCNNGA 6 cut(s) 7, 268, 446, 1196, 1463, 1561
Hpy8I GTNNAC 2 cut(s) 123, 1504
HpyAV CCTTC 4 cut(s) 106, 666, 921, 1556
HpyCH4III ACNGT 6 cut(s) 701, 707, 774, 845, 1036, 1501
HpyCH4IV ACGT 1 cut(s) 156
HpyF10VI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 965, 1140
HpyF3I CTNAG 5 cut(s) 354, 817, 851, 857, 1268
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 415
HspAI GCGC 2 cut(s) 1373, 1540
Ksp22I TGATCA 3 cut(s) 3, 303, 867
Kzo9I GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
LguI GCTCTTC 2 cut(s) 1232, 1288
LmnI GCTCC 5 cut(s) 240, 295, 552, 904, 912
Lsp1109I GCAGC 6 cut(s) 215, 454, 514, 1254, 1382, 1554
LweI GCATC 4 cut(s) 571, 616, 1427, 1502
MaeI CTAG 2 cut(s) 1322, 1463
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 6 cut(s) 49, 357, 701, 1036, 1247, 1442
MalI GATC 6 cut(s) 5, 28, 305, 869, 1117, 1317
MboI GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 3 cut(s) 79, 343, 909
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 5 cut(s) 141, 577, 664, 838, 1098
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 4 cut(s) 1154, 1193, 1394, 1468
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 1495
MscI TGGCCA 1 cut(s) 212
MseI TTAA 4 cut(s) 663, 975, 1346, 1536
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 3 cut(s) 128, 467, 1245
MspI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1005, 1140
MspR9I CCNGG 6 cut(s) 214, 363, 1390, 1415, 1425, 1575
MvaI CCWGG 5 cut(s) 214, 1390, 1415, 1425, 1575
MwoI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 965, 1140
NciI CCSGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 1489
NdeII GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
NlaIV GGNNCC 5 cut(s) 76, 77, 117, 236, 1317
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 1247, 1442
NsiI ATGCAT 1 cut(s) 1495
NspI RCATGY 1 cut(s) 1573
NspV TTCGAA 1 cut(s) 914
PagI TCATGA 1 cut(s) 6
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 1232, 1288
PfeI GAWTC 3 cut(s) 137, 1226, 1379
PinAI ACCGGT 1 cut(s) 739
PleI GAGTC 4 cut(s) 1153, 1192, 1393, 1467
PpsI GAGTC 4 cut(s) 1153, 1192, 1393, 1467
Ppu21I YACGTR 1 cut(s) 157
Psp124BI GAGCTC 1 cut(s) 909
Psp6I CCWGG 5 cut(s) 212, 1388, 1413, 1423, 1573
PspEI GGTNACC 1 cut(s) 1036
PspGI CCWGG 5 cut(s) 212, 1388, 1413, 1423, 1573
PspN4I GGNNCC 5 cut(s) 76, 77, 117, 236, 1317
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 3 cut(s) 75, 76, 116
PstI CTGCAG 4 cut(s) 233, 289, 639, 1372
PstNI CAGNNNCTG 2 cut(s) 97, 1523
PsuI RGATCY 1 cut(s) 1315
RsaI GTAC 4 cut(s) 155, 326, 847, 1394
RsaNI GTAC 4 cut(s) 154, 325, 846, 1393
RseI CAYNNNNRTG 1 cut(s) 404
SacI GAGCTC 1 cut(s) 909
SapI GCTCTTC 2 cut(s) 1232, 1288
SaqAI TTAA 4 cut(s) 663, 975, 1346, 1536
Sau3AI GATC 6 cut(s) 3, 26, 303, 867, 1115, 1315
Sau96I GGNCC 3 cut(s) 75, 76, 116
ScaI AGTACT 1 cut(s) 847
SchI GAGTC 4 cut(s) 1154, 1193, 1394, 1468
ScrFI CCNGG 6 cut(s) 214, 363, 1390, 1415, 1425, 1575
SduI GDGCHC 3 cut(s) 79, 343, 909
SfaNI GCATC 4 cut(s) 571, 616, 1427, 1502
SfcI CTRYAG 4 cut(s) 229, 285, 635, 1368
SfuI TTCGAA 1 cut(s) 914
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 266, 1044
SmoI CTYRAG 2 cut(s) 266, 1044
Sse9I AATT 5 cut(s) 141, 577, 664, 838, 1098
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 9 cut(s) 57, 100, 128, 219, 465, 678, 722, 981, 1245
SspMI CTAG 2 cut(s) 1322, 1463
SstI GAGCTC 1 cut(s) 909
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 6 cut(s) 212, 361, 1388, 1413, 1423, 1573
TaaI ACNGT 6 cut(s) 701, 707, 774, 845, 1036, 1501
TaiI ACGT 1 cut(s) 159
TaqI TCGA 5 cut(s) 309, 568, 863, 914, 1484
TasI AATT 5 cut(s) 141, 577, 664, 838, 1098
TatI WGTACW 1 cut(s) 845
TauI GCSGC 4 cut(s) 59, 131, 222, 467
TfiI GAWTC 3 cut(s) 137, 1226, 1379
Tru1I TTAA 4 cut(s) 663, 975, 1346, 1536
Tru9I TTAA 4 cut(s) 663, 975, 1346, 1536
TscAI CASTG 3 cut(s) 289, 777, 1066
TseFI GTSAC 2 cut(s) 1247, 1442
TseI GCWGC 6 cut(s) 228, 467, 502, 1242, 1370, 1542
Tsp45I GTSAC 2 cut(s) 1247, 1442
TspGWI ACGGA 1 cut(s) 1278
TspRI CASTG 3 cut(s) 289, 777, 1066
XbaI TCTAGA 1 cut(s) 1462
XceI RCATGY 1 cut(s) 1573
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XspI CTAG 2 cut(s) 1322, 1463
ZrmI AGTACT 1 cut(s) 847
Zsp2I ATGCAT 1 cut(s) 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.