Rh2CG523900
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0014534
Physical Location & Seq
Forward (+)
69814189 .. 69817504
3316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG523900.1

Sequence Viewer

Length: 1605 bp
ATGATCATGAGCAACAGCGGAGATGGATCAATGGACTTGAACGAGATGGTTGCGGCCGCCCAGTTAGGAGGTGGGGCCCACCAGCTTCATCAGCCCCTGCGGGGGCTGAAGAAGGGGCCGTGGACAGCTGCCGAGGATTCAATTCTGATGGAGTACGTGAAGAAACACGGCGAGGGGAACTGGAATGCCGTGCAGAAGAACTCGGGGCTGGCCAGGTGCGGCAAGAGCTGCAGGCTCCGGTGGGCTAACCATTTGAGGCCTAATCTCAAGAAAGGCTCTCTCACTGCAGAGGAGGAGAGAATAATCATCGAACTTCATGCCAAGTACGGCAACAAATGGGCTCGCATGGCTTCTCAGTTACCCGGTAGGACTGACAACGAGATAAAGAACTACTGGAACACAAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATTTACCCTCACGAGCTTCAACATGAAGCCGCTGCTTCATTTCACCACCAACAAGCTCATCATCAGCAGCAGAGGCATAACTCAAACTCGTCCTCTTCTTCATTTTCATCGCTCCTTTCCTCCTCGCATCCTCGAAAAGCAAATTACAGCTCTACCCCATCGCTCTCTCTTTATGACCACATCAGTTTTGATGCCTCTCTGCAGAACCACCACAACTCTCCTTCTCTTAATTACTCCAACTCCGCCATGACGACCCAGTTCAACGGTAACGGTGGCTTTGCTATCCCGCTATCTCCGGTTTCACCGGTTTCCCCATTTGGGTCATCGTCTTCAGCACTGTTCAACCAGACCAATATTCCAAACCAAACCATTTTGCCAACTCCATCTCAATACTACAACTCAGGTCATGGAGGTTTTGGCAATTACAGTACTCTTAGCCTTAGCTCGATGATCATGGGGACTCCTACTTTTGAGCCAATGAACTCGGAGCTCCCTTCGAACCAAACACCACCATACTCGCCATACACCCCCACGAAACCTGTTTCTTCTGCTAATTTTAATGGCGGTGAGGGTCTGATGGAGGCTTCCGGCAACACCAATGGCTATGAGATTGAAACGGTAACCTCTCAAGGAAAGAGAGGCAGTGGTCTGCTGGATGATGTGTTGGTGCAAGCTGATGTAATTTGTGGGAACAAGAGATCAAGGAGTGGAGACAGCTCATCCGGCGAGTCAGGGAAAGACAAATATATAGTGGAGGAGGAGGATGAGTCTGCTGGTCAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGCGGTGACAATAGTGCTGAAAACCTAAGGGATGGTAGCTCTTCTCCGTCAGTTGGGATGAAACCAAGTGAGGATCCACTAGAGGATATGGACGATGACTTGTTAAGCCTGCTCAACTTCCAATCTGCAGCGCCAGAATCCGAGTCGTGGTACGGGGGAAGCATATCTGACCAGGCATCACCAGGCATCAATGGTGCAAGTGACAATAATAATGTGAGTCTAGACATTCGGCAAAACACATCGACATATGCATCCACGGTGAACATGAGTGCAGCAGAACCTGATGATGAAGTTAAGCGCCGCCTTCCTCCATGCTTCTGGAACAACATGCCTGGCATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

534

Amino Acids

58.04

Weight (kDa)

5.4

Isoelectric Point (pI)

56.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 38 - 85 1.5e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 41 - 99 1.9e-11 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 91 - 134 4.7e-16 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 138 6e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 34, 1328, 1341
AcoI YGGCCR 2 cut(s) 54, 210
AcuI CTGAAG 2 cut(s) 128, 750
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 4 cut(s) 155, 326, 865, 1412
AfiI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 6 cut(s) 40, 141, 455, 697, 778, 1049
AjnI CCWGG 4 cut(s) 212, 1431, 1441, 1591
Alw21I GWGCWC 1 cut(s) 927
Alw26I GTCTC 2 cut(s) 406, 1140
AlwI GGATC 3 cut(s) 34, 1328, 1341
AlwNI CAGNNNCTG 2 cut(s) 97, 1541
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 5 cut(s) 54, 75, 116, 210, 257
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 7 cut(s) 128, 228, 467, 502, 1260, 1388, 1532
AsiGI ACCGGT 1 cut(s) 739
AspLEI GCGC 2 cut(s) 1393, 1560
AspS9I GGNCC 3 cut(s) 75, 76, 116
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 6 cut(s) 470, 729, 1013, 1277, 1431, 1531
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 202
AxyI CCTNAGG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 212
BamHI GGATCC 1 cut(s) 1333
BanII GRGCYC 3 cut(s) 79, 343, 927
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 2 cut(s) 756, 1233
Bbv12I GWGCWC 1 cut(s) 927
BbvI GCAGC 7 cut(s) 115, 215, 454, 514, 1272, 1400, 1544
BccI CCATC 7 cut(s) 17, 40, 142, 601, 826, 1006, 1286
BceAI ACGGC 4 cut(s) 103, 173, 184, 343
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 299, 333
BciT130I CCWGG 4 cut(s) 214, 1433, 1443, 1593
BclI TGATCA 2 cut(s) 3, 885
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 2 cut(s) 406, 1140
BfaI CTAG 2 cut(s) 1340, 1481
BfmI CTRYAG 4 cut(s) 229, 285, 635, 1386
BfoI RGCGCY 2 cut(s) 1394, 1561
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 75, 76, 116
BmiI GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
BmrFI CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
BmrI ACTGGG 2 cut(s) 55, 685
BmsI GCATC 5 cut(s) 571, 616, 1445, 1455, 1520
BmuI ACTGGG 2 cut(s) 55, 685
BpiI GAAGAC 2 cut(s) 756, 1233
Bpu10I CCTNAGC 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 932
BpuEI CTTGAG 2 cut(s) 251, 1047
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 1 cut(s) 157
BsaHI GRCGYC 1 cut(s) 415
BsaJI CCNNGG 3 cut(s) 119, 132, 1515
BsaWI WCCGGW 3 cut(s) 237, 730, 739
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1187, 1217
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 4 cut(s) 61, 185, 398, 691
Bse21I CCTNAGG 1 cut(s) 1286
BseBI CCWGG 4 cut(s) 214, 1433, 1443, 1593
BseDI CCNNGG 3 cut(s) 119, 132, 1515
BseGI GGATG 7 cut(s) 562, 1096, 1154, 1204, 1297, 1323, 1511
BseLI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
BseMII CTCAG 2 cut(s) 368, 849
BseNI ACTGG 4 cut(s) 61, 185, 398, 691
BseRI GAGGAG 5 cut(s) 305, 308, 547, 1205, 1208
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 1 cut(s) 54
BseXI GCAGC 7 cut(s) 115, 215, 454, 514, 1272, 1400, 1544
BsgI GTGCAG 2 cut(s) 212, 1551
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 5 cut(s) 56, 77, 118, 212, 259
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 927
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 5 cut(s) 101, 102, 753, 1313, 1407
BsmAI GTCTC 2 cut(s) 406, 1140
BsmBI CGTCTC 1 cut(s) 406
BsmFI GGGAC 1 cut(s) 907
BsmI GAATGC 1 cut(s) 190
BsnI GGCC 5 cut(s) 56, 77, 118, 212, 259
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 932
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 343, 927
Bsp143I GATC 5 cut(s) 3, 26, 885, 1133, 1333
BspANI GGCC 5 cut(s) 56, 77, 118, 212, 259
BspCNI CTCAG 2 cut(s) 367, 848
BspHI TCATGA 1 cut(s) 6
BspLI GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
BspMAI CTGCAG 4 cut(s) 233, 289, 639, 1390
BspPI GGATC 3 cut(s) 34, 1328, 1341
BspQI GCTCTTC 2 cut(s) 1250, 1306
BspT104I TTCGAA 1 cut(s) 932
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 4 cut(s) 61, 185, 398, 691
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 3 cut(s) 119, 132, 1515
BssMI GATC 5 cut(s) 3, 26, 885, 1133, 1333
BssNI GRCGYC 1 cut(s) 415
BssSI CACGAG 1 cut(s) 446
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 4 cut(s) 214, 1433, 1443, 1593
Bst4CI ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
Bst6I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 157
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 5 cut(s) 210, 233, 343, 1107, 1370
BstDEI CTNAG 5 cut(s) 354, 835, 869, 875, 1286
BstDSI CCRYGG 2 cut(s) 119, 1515
BstEII GGTNACC 1 cut(s) 1054
BstF5I GGATG 7 cut(s) 562, 1096, 1154, 1204, 1297, 1323, 1511
BstH2I RGCGCY 2 cut(s) 1394, 1561
BstHHI GCGC 2 cut(s) 1393, 1560
BstKTI GATC 5 cut(s) 6, 29, 888, 1136, 1336
BstMAI GTCTC 2 cut(s) 406, 1140
BstMBI GATC 5 cut(s) 3, 26, 885, 1133, 1333
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 508, 1158
BstNI CCWGG 4 cut(s) 214, 1433, 1443, 1593
BstNSI RCATGY 1 cut(s) 1591
BstPI GGTNACC 1 cut(s) 1054
BstSCI CCNGG 5 cut(s) 212, 361, 1431, 1441, 1591
BstSFI CTRYAG 4 cut(s) 229, 285, 635, 1386
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 7 cut(s) 115, 215, 454, 514, 1272, 1400, 1544
BstV2I GAAGAC 2 cut(s) 756, 1233
BstX2I RGATCY 1 cut(s) 1333
BstXI CCANNNNNNTGG 1 cut(s) 1578
BstYI RGATCY 1 cut(s) 1333
BstZI CGGCCG 1 cut(s) 54
Bsu36I CCTNAGG 1 cut(s) 1286
BsuRI GGCC 5 cut(s) 56, 77, 118, 212, 259
BtgI CCRYGG 2 cut(s) 119, 1515
BtgZI GCGATG 2 cut(s) 528, 579
BtsCI GGATG 7 cut(s) 562, 1096, 1154, 1204, 1297, 1323, 1511
BtsI GCAGTG 2 cut(s) 282, 1084
BtsIMutI CAGTG 3 cut(s) 282, 770, 1084
Cac8I GCNNGC 5 cut(s) 210, 233, 343, 1107, 1370
CaiI CAGNNNCTG 2 cut(s) 97, 1541
CciI TCATGA 1 cut(s) 6
CciNI GCGGCCGC 1 cut(s) 54
CfoI GCGC 2 cut(s) 1393, 1560
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 75, 76, 116
CseI GACGC 1 cut(s) 423
Csp6I GTAC 4 cut(s) 154, 325, 864, 1411
CspAI ACCGGT 1 cut(s) 739
CviQI GTAC 4 cut(s) 154, 325, 864, 1411
DdeI CTNAG 5 cut(s) 354, 835, 869, 875, 1286
DpnI GATC 5 cut(s) 5, 28, 887, 1135, 1335
DpnII GATC 5 cut(s) 3, 26, 885, 1133, 1333
EaeI YGGCCR 2 cut(s) 54, 210
EagI CGGCCG 1 cut(s) 54
Eam1104I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EarI CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 925
EclXI CGGCCG 1 cut(s) 54
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 3 cut(s) 79, 343, 927
Eco52I CGGCCG 1 cut(s) 54
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 2 cut(s) 128, 750
Eco81I CCTNAGG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 202
Eco91I GGTNACC 1 cut(s) 1054
EcoICRI GAGCTC 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1054
EcoRII CCWGG 4 cut(s) 212, 1431, 1441, 1591
EcoT22I ATGCAT 1 cut(s) 1513
EcoT38I GRGCYC 3 cut(s) 79, 343, 927
Esp3I CGTCTC 1 cut(s) 406
FaqI GGGAC 1 cut(s) 907
FauI CCCGC 2 cut(s) 93, 729
FauNDI CATATG 1 cut(s) 1507
FbaI TGATCA 2 cut(s) 3, 885
FokI GGATG 7 cut(s) 549, 1103, 1141, 1211, 1304, 1330, 1498
FriOI GRGCYC 3 cut(s) 79, 343, 927
FspBI CTAG 2 cut(s) 1340, 1481
GlaI GCGC 2 cut(s) 1392, 1559
HaeII RGCGCY 2 cut(s) 1394, 1561
HaeIII GGCC 5 cut(s) 56, 77, 118, 212, 259
HapII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HgaI GACGC 1 cut(s) 423
HhaI GCGC 2 cut(s) 1393, 1560
Hin1I GRCGYC 1 cut(s) 415
Hin6I GCGC 2 cut(s) 1391, 1558
HinP1I GCGC 2 cut(s) 1391, 1558
HinfI GANTC 8 cut(s) 137, 895, 1163, 1202, 1244, 1397, 1403, 1477
HpaII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HphI GGTGA 6 cut(s) 470, 729, 1013, 1277, 1431, 1531
Hpy166II GTNNAC 2 cut(s) 123, 1522
Hpy188I TCNGA 5 cut(s) 147, 922, 1011, 1402, 1429
Hpy188III TCNNGA 6 cut(s) 7, 268, 446, 1214, 1481, 1579
Hpy8I GTNNAC 2 cut(s) 123, 1522
HpyAV CCTTC 4 cut(s) 106, 666, 939, 1574
HpyCH4III ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
HpyCH4IV ACGT 1 cut(s) 156
HpyF10VI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 508, 1158
HpyF3I CTNAG 5 cut(s) 354, 835, 869, 875, 1286
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 415
HspAI GCGC 2 cut(s) 1391, 1558
Ksp22I TGATCA 2 cut(s) 3, 885
Kzo9I GATC 5 cut(s) 3, 26, 885, 1133, 1333
LguI GCTCTTC 2 cut(s) 1250, 1306
LmnI GCTCC 4 cut(s) 240, 552, 922, 930
Lsp1109I GCAGC 7 cut(s) 115, 215, 454, 514, 1272, 1400, 1544
LweI GCATC 5 cut(s) 571, 616, 1445, 1455, 1520
MaeI CTAG 2 cut(s) 1340, 1481
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 5 cut(s) 357, 701, 1054, 1265, 1460
MalI GATC 5 cut(s) 5, 28, 887, 1135, 1335
MboI GATC 5 cut(s) 3, 26, 885, 1133, 1333
MflI RGATCY 1 cut(s) 1333
MhlI GDGCHC 3 cut(s) 79, 343, 927
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 7 cut(s) 141, 435, 577, 664, 856, 988, 1116
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 5 cut(s) 889, 1172, 1211, 1412, 1486
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 1513
MscI TGGCCA 1 cut(s) 212
MseI TTAA 4 cut(s) 663, 993, 1364, 1554
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 4 cut(s) 18, 128, 467, 1263
MspI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
MspR9I CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
Mva1269I GAATGC 1 cut(s) 190
MvaI CCWGG 4 cut(s) 214, 1433, 1443, 1593
MwoI GCNNNNNNNGC 6 cut(s) 91, 225, 228, 347, 508, 1158
NciI CCSGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 1507
NdeII GATC 5 cut(s) 3, 26, 885, 1133, 1333
NlaIV GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 2 cut(s) 1265, 1460
NotI GCGGCCGC 1 cut(s) 54
NsiI ATGCAT 1 cut(s) 1513
NspI RCATGY 1 cut(s) 1591
NspV TTCGAA 1 cut(s) 932
PagI TCATGA 1 cut(s) 6
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 1250, 1306
PctI GAATGC 1 cut(s) 190
PfeI GAWTC 3 cut(s) 137, 1244, 1397
PinAI ACCGGT 1 cut(s) 739
PleI GAGTC 5 cut(s) 889, 1171, 1210, 1411, 1485
PpsI GAGTC 5 cut(s) 889, 1171, 1210, 1411, 1485
Ppu21I YACGTR 1 cut(s) 157
Psp124BI GAGCTC 1 cut(s) 927
Psp6I CCWGG 4 cut(s) 212, 1431, 1441, 1591
PspEI GGTNACC 1 cut(s) 1054
PspGI CCWGG 4 cut(s) 212, 1431, 1441, 1591
PspN4I GGNNCC 5 cut(s) 76, 77, 117, 236, 1335
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 3 cut(s) 75, 76, 116
PstI CTGCAG 4 cut(s) 233, 289, 639, 1390
PstNI CAGNNNCTG 2 cut(s) 97, 1541
PsuI RGATCY 1 cut(s) 1333
PvuII CAGCTG 1 cut(s) 128
RsaI GTAC 4 cut(s) 155, 326, 865, 1412
RsaNI GTAC 4 cut(s) 154, 325, 864, 1411
RseI CAYNNNNRTG 1 cut(s) 404
SacI GAGCTC 1 cut(s) 927
SapI GCTCTTC 2 cut(s) 1250, 1306
SaqAI TTAA 4 cut(s) 663, 993, 1364, 1554
Sau3AI GATC 5 cut(s) 3, 26, 885, 1133, 1333
Sau96I GGNCC 3 cut(s) 75, 76, 116
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 5 cut(s) 889, 1172, 1211, 1412, 1486
ScrFI CCNGG 5 cut(s) 214, 363, 1433, 1443, 1593
SduI GDGCHC 3 cut(s) 79, 343, 927
SfaNI GCATC 5 cut(s) 571, 616, 1445, 1455, 1520
SfcI CTRYAG 4 cut(s) 229, 285, 635, 1386
SfuI TTCGAA 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 266, 1062
SmoI CTYRAG 2 cut(s) 266, 1062
Sse9I AATT 7 cut(s) 141, 435, 577, 664, 856, 988, 1116
SseBI AGGCCT 1 cut(s) 259
SspI AATATT 1 cut(s) 790
SspMI CTAG 2 cut(s) 1340, 1481
SstI GAGCTC 1 cut(s) 927
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 5 cut(s) 212, 361, 1431, 1441, 1591
TaaI ACNGT 6 cut(s) 701, 707, 774, 863, 1054, 1519
TaiI ACGT 1 cut(s) 159
TaqI TCGA 5 cut(s) 309, 568, 881, 932, 1502
TasI AATT 7 cut(s) 141, 435, 577, 664, 856, 988, 1116
TatI WGTACW 1 cut(s) 863
TauI GCSGC 5 cut(s) 56, 59, 222, 467, 1563
TfiI GAWTC 3 cut(s) 137, 1244, 1397
Tru1I TTAA 4 cut(s) 663, 993, 1364, 1554
Tru9I TTAA 4 cut(s) 663, 993, 1364, 1554
TscAI CASTG 3 cut(s) 289, 777, 1084
TseFI GTSAC 2 cut(s) 1265, 1460
TseI GCWGC 7 cut(s) 128, 228, 467, 502, 1260, 1388, 1532
Tsp45I GTSAC 2 cut(s) 1265, 1460
TspGWI ACGGA 1 cut(s) 1296
TspRI CASTG 3 cut(s) 289, 777, 1084
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 1 cut(s) 1591
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XspI CTAG 2 cut(s) 1340, 1481
ZrmI AGTACT 1 cut(s) 865
Zsp2I ATGCAT 1 cut(s) 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.