Rh2DG563400
MYB Family

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0014534
Physical Location & Seq
Forward (+)
79212579 .. 79215962
3384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG563400.1

Sequence Viewer

Length: 1338 bp
ATGATCATGAGCAACAGCGGAGATGGATCAATGGACTTGAACGAGATGGTTGCGGCCGCCCAGTTAGGAGGTGGGGCCCACCAGCTTCATCAGCCCCTGCGGGGGCTGAAGAAGGGGCCGTGGACAGCGGCCGAGGATTCAATTCTGATGGAGTACGTGAAGAAACACGGCGAGGGGAACTGGAATGCCGTGCAGAAGAACTCGGGGCTGGCCAGGTGCGGCAAGAGCTGCAGGCTCCGGTGGGCTAACCATTTGAGGCCTAATCTCAAGAAAGGCTCTCTCACTGCAGAGGAGGAGCGAATGATCATCGAACTTCATGCCAAGTACGGCAACAAATGGGCTCGCATGGCTTCTCAGTTACCCGGTAGGACTGACAACGAGATAAAGAACTACTGGAACACAAGAATGAAGAGACGCCAGAGAGCCGGATTACCAATTTACCCTCACGAGCTTCAACATGAAGCCGCTGCTTCATTTCACCACCAACAAGCTCATCATCAGCAGCAGAGGCATAACTCAAACTCGTCCTCTTCTTCATTTTCATCGCTCCTTTCCTCCTCGCATCCTCGAAAAGCAAATTACAGCTCTACCCCATCGCTCTCTCTTTATGACCACATCAGTTTTGATGCCTCTCTGCAGAACCACCACAACTCTCCTTCTCTTAATTACTCCAACTCCGCCATGACGACCCAGTTCAACGGTAACGGTGGCTTTGCTATCCCGCTATCTCCGGTTTCACCGGTTTCCCCATTTGGGTCATCGTCTTCAGCACTGTTCAACCAGACCAATATTCCAAACCAAACCATTTTGCCAACTCCATCTCAATACTACAACTCAGGTCATGGAGGTTTTGGCAATTACAGTACTCTTAGCCTTAGCTCGATGATCATGAGGACTCCTACTTATGAGCCAATGAACTCGGAGCTCCCTTCGAACCAAACACCACCATACTCGCCATACACCCCCACGAAACCTGCTTCTTCTGCTAACTTTAATGGCGGTGAGGGTCTGATGGAGGCTTCCGGCAACACCAATGGCTATGAGATTGAAACGGTAACCTCTCAAGGAAAGAGAGGCAGTGGTCTGCTGGATGATGTGTTGGTGCAAGCTGATGTAATTTGTGGGAACAAGAGATCAAGGAGTGGAGACAGCTCATCCGGCGAGTCAGGGAAAGACAAATATATAGTGGAGGAGGAGGATGAGTCTGCTGGTCAGGAAGAGGAAGAAGACAATGTGCAAGAGGAATCAACTTGGAAGAGCAGCGGTGACAATAGTGCTGAAAACCTAAGGGATGGTAGCTCTTCTCCGTCAGTTGGTAAGATACTTATAACAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0001558 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007033 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010769 GO:0010941 GO:0010942 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033993 GO:0040008 GO:0042221 GO:0042995 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0044212 GO:0044424 GO:0044464 GO:0044703 GO:0045595 GO:0045893 GO:0045935 GO:0048229 GO:0048232 GO:0048235 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048638 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051510 GO:0051704 GO:0051716 GO:0055046 GO:0060255 GO:0060284 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071840 GO:0080090 GO:0080092 GO:0090406 GO:0097159 GO:0120025 GO:0140110 GO:1900618 GO:1901363 GO:1901371 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905421 GO:1905957 GO:1905959 GO:1990019 GO:2000024 GO:2000026 GO:2000112 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

445

Amino Acids

48.5

Weight (kDa)

6.38

Isoelectric Point (pI)

55.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 38 - 85 1.2e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 41 - 101 6e-12 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 91 - 134 1.1e-15 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 95 - 138 2e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014534)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32460 AT2G32460
fragaria_vesca FvH4_6g43080
malus_domestica MD09G1109900.v1.1
prunus_persica Prupe.3G216600_v2.0.a1
pyrus_communis pycom09g03240
rosa_chinensis RchiOBHm_Chr2g0159111
rosa_laevigata RLG00000021138
rosa_multiflora Rmu_sc0013510.1_g000001
rosa_roxburghii Rroxscaffold_2G00090770
rosa_rugosa Rorug02G0474000.1 Rorug02G0474100
rosa_samantha Rh2AG540900 Rh2BG553800 Rh2CG523900 Rh2DG563400
rosa_wichuraiana Rw2G044750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
Acc36I ACCTGC 1 cut(s) 982
AclWI GGATC 1 cut(s) 34
AcoI YGGCCR 3 cut(s) 54, 129, 210
AcuI CTGAAG 2 cut(s) 128, 750
AcyI GRCGYC 1 cut(s) 415
AfaI GTAC 3 cut(s) 155, 326, 865
AfiI CCNNNNNNNGG 4 cut(s) 101, 102, 753, 1313
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 6 cut(s) 40, 141, 455, 697, 778, 1049
AjnI CCWGG 1 cut(s) 212
Alw21I GWGCWC 1 cut(s) 927
Alw26I GTCTC 2 cut(s) 406, 1140
AlwI GGATC 1 cut(s) 34
AlwNI CAGNNNCTG 1 cut(s) 97
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 6 cut(s) 54, 75, 116, 129, 210, 257
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 4 cut(s) 228, 467, 502, 1260
AsiGI ACCGGT 1 cut(s) 739
AspS9I GGNCC 3 cut(s) 75, 76, 116
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 4 cut(s) 470, 729, 1013, 1277
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 202
AxyI CCTNAGG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 212
BanII GRGCYC 3 cut(s) 79, 343, 927
BauI CACGAG 1 cut(s) 446
BbsI GAAGAC 2 cut(s) 756, 1233
Bbv12I GWGCWC 1 cut(s) 927
BbvI GCAGC 4 cut(s) 215, 454, 514, 1272
BccI CCATC 7 cut(s) 17, 40, 142, 601, 826, 1006, 1286
BceAI ACGGC 4 cut(s) 103, 173, 184, 343
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 299, 333
BciT130I CCWGG 1 cut(s) 214
BclI TGATCA 3 cut(s) 3, 303, 885
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 2 cut(s) 406, 1140
BfmI CTRYAG 3 cut(s) 229, 285, 635
BfuAI ACCTGC 1 cut(s) 982
BisI GCNGC 9 cut(s) 54, 57, 129, 220, 229, 465, 468, 503, 1261
BlsI GCNGC 9 cut(s) 55, 58, 130, 221, 230, 466, 469, 504, 1262
BmcAI AGTACT 1 cut(s) 865
Bme1390I CCNGG 2 cut(s) 214, 363
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 75, 76, 116
BmiI GGNNCC 4 cut(s) 76, 77, 117, 236
BmrFI CCNGG 2 cut(s) 214, 363
BmrI ACTGGG 2 cut(s) 55, 685
BmsI GCATC 2 cut(s) 571, 616
BmuI ACTGGG 2 cut(s) 55, 685
BpiI GAAGAC 2 cut(s) 756, 1233
Bpu10I CCTNAGC 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 932
BpuEI CTTGAG 2 cut(s) 251, 1047
BpuMI CCSGG 1 cut(s) 363
BsaAI YACGTR 1 cut(s) 157
BsaHI GRCGYC 1 cut(s) 415
BsaJI CCNNGG 2 cut(s) 119, 132
BsaWI WCCGGW 3 cut(s) 237, 730, 739
BsaXI ACNNNNNCTCC 4 cut(s) 659, 689, 1187, 1217
Bsc4I CCNNNNNNNGG 4 cut(s) 101, 102, 753, 1313
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 4 cut(s) 61, 185, 398, 691
Bse21I CCTNAGG 1 cut(s) 1286
BseBI CCWGG 1 cut(s) 214
BseDI CCNNGG 2 cut(s) 119, 132
BseGI GGATG 5 cut(s) 562, 1096, 1154, 1204, 1297
BseLI CCNNNNNNNGG 4 cut(s) 101, 102, 753, 1313
BseMII CTCAG 2 cut(s) 368, 849
BseNI ACTGG 4 cut(s) 61, 185, 398, 691
BseRI GAGGAG 5 cut(s) 305, 308, 547, 1205, 1208
BseSI GKGCMC 1 cut(s) 79
BseX3I CGGCCG 2 cut(s) 54, 129
BseXI GCAGC 4 cut(s) 215, 454, 514, 1272
BsgI GTGCAG 1 cut(s) 212
Bsh1285I CGRYCG 2 cut(s) 57, 132
BshFI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BshTI ACCGGT 1 cut(s) 739
BsiEI CGRYCG 2 cut(s) 57, 132
BsiHKAI GWGCWC 1 cut(s) 927
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
BslI CCNNNNNNNGG 4 cut(s) 101, 102, 753, 1313
BsmAI GTCTC 2 cut(s) 406, 1140
BsmBI CGTCTC 1 cut(s) 406
BsmI GAATGC 1 cut(s) 190
BsnI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 932
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 343, 927
Bsp143I GATC 5 cut(s) 3, 26, 303, 885, 1133
BspANI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BspCNI CTCAG 2 cut(s) 367, 848
BspHI TCATGA 2 cut(s) 6, 888
BspLI GGNNCC 4 cut(s) 76, 77, 117, 236
BspMAI CTGCAG 3 cut(s) 233, 289, 639
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 1 cut(s) 34
BspQI GCTCTTC 2 cut(s) 1250, 1306
BspT104I TTCGAA 1 cut(s) 932
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 4 cut(s) 61, 185, 398, 691
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 2 cut(s) 119, 132
BssMI GATC 5 cut(s) 3, 26, 303, 885, 1133
BssNI GRCGYC 1 cut(s) 415
BssSI CACGAG 1 cut(s) 446
Bst2BI CACGAG 1 cut(s) 446
Bst2UI CCWGG 1 cut(s) 214
Bst4CI ACNGT 5 cut(s) 701, 707, 774, 863, 1054
Bst6I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
BstACI GRCGYC 1 cut(s) 415
BstAPI GCANNNNNTGC 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 157
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 4 cut(s) 210, 233, 343, 1107
BstDEI CTNAG 5 cut(s) 354, 835, 869, 875, 1286
BstDSI CCRYGG 1 cut(s) 119
BstEII GGTNACC 1 cut(s) 1054
BstF5I GGATG 5 cut(s) 562, 1096, 1154, 1204, 1297
BstKTI GATC 5 cut(s) 6, 29, 306, 888, 1136
BstMAI GTCTC 2 cut(s) 406, 1140
BstMBI GATC 5 cut(s) 3, 26, 303, 885, 1133
BstMCI CGRYCG 2 cut(s) 57, 132
BstMWI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
BstNI CCWGG 1 cut(s) 214
BstPI GGTNACC 1 cut(s) 1054
BstSCI CCNGG 2 cut(s) 212, 361
BstSFI CTRYAG 3 cut(s) 229, 285, 635
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 4 cut(s) 215, 454, 514, 1272
BstV2I GAAGAC 2 cut(s) 756, 1233
BstZI CGGCCG 2 cut(s) 54, 129
Bsu36I CCTNAGG 1 cut(s) 1286
BsuRI GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
BtgI CCRYGG 1 cut(s) 119
BtgZI GCGATG 2 cut(s) 528, 579
BtsCI GGATG 5 cut(s) 562, 1096, 1154, 1204, 1297
BtsI GCAGTG 2 cut(s) 282, 1084
BtsIMutI CAGTG 3 cut(s) 282, 770, 1084
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 4 cut(s) 210, 233, 343, 1107
CaiI CAGNNNCTG 1 cut(s) 97
CciI TCATGA 2 cut(s) 6, 888
CciNI GCGGCCGC 1 cut(s) 54
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 3 cut(s) 75, 76, 116
CseI GACGC 1 cut(s) 423
Csp6I GTAC 3 cut(s) 154, 325, 864
CspAI ACCGGT 1 cut(s) 739
CviAII CATG 7 cut(s) 7, 317, 346, 458, 682, 842, 889
CviQI GTAC 3 cut(s) 154, 325, 864
DdeI CTNAG 5 cut(s) 354, 835, 869, 875, 1286
DpnI GATC 5 cut(s) 5, 28, 305, 887, 1135
DpnII GATC 5 cut(s) 3, 26, 303, 885, 1133
EaeI YGGCCR 3 cut(s) 54, 129, 210
EagI CGGCCG 2 cut(s) 54, 129
Eam1104I CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EarI CTCTTC 5 cut(s) 404, 535, 1212, 1250, 1306
EciI GGCGGA 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 925
EclXI CGGCCG 2 cut(s) 54, 129
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 3 cut(s) 79, 343, 927
Eco52I CGGCCG 2 cut(s) 54, 129
Eco53kI GAGCTC 1 cut(s) 925
Eco57I CTGAAG 2 cut(s) 128, 750
Eco81I CCTNAGG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 202
Eco91I GGTNACC 1 cut(s) 1054
EcoICRI GAGCTC 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 1054
EcoRII CCWGG 1 cut(s) 212
EcoT38I GRGCYC 3 cut(s) 79, 343, 927
Esp3I CGTCTC 1 cut(s) 406
FaeI CATG 7 cut(s) 10, 320, 349, 461, 685, 845, 892
FatI CATG 7 cut(s) 6, 316, 345, 457, 681, 841, 888
FauI CCCGC 2 cut(s) 93, 729
FbaI TGATCA 3 cut(s) 3, 303, 885
Fnu4HI GCNGC 9 cut(s) 54, 57, 129, 220, 229, 465, 468, 503, 1261
FokI GGATG 5 cut(s) 549, 1103, 1141, 1211, 1304
FriOI GRGCYC 3 cut(s) 79, 343, 927
Fsp4HI GCNGC 9 cut(s) 54, 57, 129, 220, 229, 465, 468, 503, 1261
GluI GCNGC 9 cut(s) 54, 57, 129, 220, 229, 465, 468, 503, 1261
HaeIII GGCC 6 cut(s) 56, 77, 118, 131, 212, 259
HapII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HgaI GACGC 1 cut(s) 423
Hin1I GRCGYC 1 cut(s) 415
Hin1II CATG 7 cut(s) 10, 320, 349, 461, 685, 845, 892
HinfI GANTC 5 cut(s) 137, 895, 1163, 1202, 1244
HpaII CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
HphI GGTGA 4 cut(s) 470, 729, 1013, 1277
Hpy166II GTNNAC 1 cut(s) 123
Hpy188I TCNGA 3 cut(s) 147, 922, 1011
Hpy188III TCNNGA 5 cut(s) 7, 268, 446, 889, 1214
Hpy8I GTNNAC 1 cut(s) 123
HpyAV CCTTC 3 cut(s) 106, 666, 939
HpyCH4III ACNGT 5 cut(s) 701, 707, 774, 863, 1054
HpyCH4IV ACGT 1 cut(s) 156
HpyCH4V TGCA 6 cut(s) 193, 231, 287, 637, 1105, 1237
HpyF10VI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
HpyF3I CTNAG 5 cut(s) 354, 835, 869, 875, 1286
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 415
Hsp92II CATG 7 cut(s) 10, 320, 349, 461, 685, 845, 892
Ksp22I TGATCA 3 cut(s) 3, 303, 885
Kzo9I GATC 5 cut(s) 3, 26, 303, 885, 1133
LguI GCTCTTC 2 cut(s) 1250, 1306
LmnI GCTCC 5 cut(s) 240, 295, 552, 922, 930
Lsp1109I GCAGC 4 cut(s) 215, 454, 514, 1272
LweI GCATC 2 cut(s) 571, 616
MaeII ACGT 1 cut(s) 156
MaeIII GTNAC 4 cut(s) 357, 701, 1054, 1265
MalI GATC 5 cut(s) 5, 28, 305, 887, 1135
MboI GATC 5 cut(s) 3, 26, 303, 885, 1133
MhlI GDGCHC 3 cut(s) 79, 343, 927
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 7 cut(s) 141, 435, 577, 664, 856, 1116, 1333
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 3 cut(s) 889, 1172, 1211
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
MseI TTAA 3 cut(s) 663, 993, 1336
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 4 cut(s) 18, 128, 467, 1263
MspI CCGG 7 cut(s) 238, 363, 426, 731, 740, 1023, 1158
MspR9I CCNGG 2 cut(s) 214, 363
Mva1269I GAATGC 1 cut(s) 190
MvaI CCWGG 1 cut(s) 214
MwoI GCNNNNNNNGC 7 cut(s) 91, 225, 228, 347, 508, 983, 1158
NciI CCSGG 1 cut(s) 363
NdeII GATC 5 cut(s) 3, 26, 303, 885, 1133
NlaIII CATG 7 cut(s) 10, 320, 349, 461, 685, 845, 892
NlaIV GGNNCC 4 cut(s) 76, 77, 117, 236
NmeAIII GCCGAG 1 cut(s) 157
NmuCI GTSAC 1 cut(s) 1265
NotI GCGGCCGC 1 cut(s) 54
NspV TTCGAA 1 cut(s) 932
PagI TCATGA 2 cut(s) 6, 888
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 1250, 1306
PctI GAATGC 1 cut(s) 190
PfeI GAWTC 2 cut(s) 137, 1244
PinAI ACCGGT 1 cut(s) 739
PkrI GCNGC 9 cut(s) 55, 58, 130, 221, 230, 466, 469, 504, 1262
PleI GAGTC 3 cut(s) 889, 1171, 1210
PpsI GAGTC 3 cut(s) 889, 1171, 1210
Ppu21I YACGTR 1 cut(s) 157
PsiI TTATAA 1 cut(s) 1328
Psp124BI GAGCTC 1 cut(s) 927
Psp6I CCWGG 1 cut(s) 212
PspEI GGTNACC 1 cut(s) 1054
PspGI CCWGG 1 cut(s) 212
PspN4I GGNNCC 4 cut(s) 76, 77, 117, 236
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 3 cut(s) 75, 76, 116
PstI CTGCAG 3 cut(s) 233, 289, 639
PstNI CAGNNNCTG 1 cut(s) 97
RsaI GTAC 3 cut(s) 155, 326, 865
RsaNI GTAC 3 cut(s) 154, 325, 864
RseI CAYNNNNRTG 1 cut(s) 404
SacI GAGCTC 1 cut(s) 927
SapI GCTCTTC 2 cut(s) 1250, 1306
SaqAI TTAA 3 cut(s) 663, 993, 1336
SatI GCNGC 9 cut(s) 54, 57, 129, 220, 229, 465, 468, 503, 1261
Sau3AI GATC 5 cut(s) 3, 26, 303, 885, 1133
Sau96I GGNCC 3 cut(s) 75, 76, 116
ScaI AGTACT 1 cut(s) 865
SchI GAGTC 3 cut(s) 889, 1172, 1211
ScrFI CCNGG 2 cut(s) 214, 363
SduI GDGCHC 3 cut(s) 79, 343, 927
SfaNI GCATC 2 cut(s) 571, 616
SfcI CTRYAG 3 cut(s) 229, 285, 635
SfuI TTCGAA 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 266, 1062
SmoI CTYRAG 2 cut(s) 266, 1062
Sse9I AATT 7 cut(s) 141, 435, 577, 664, 856, 1116, 1333
SseBI AGGCCT 1 cut(s) 259
SspI AATATT 1 cut(s) 790
SstI GAGCTC 1 cut(s) 927
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 2 cut(s) 212, 361
TaaI ACNGT 5 cut(s) 701, 707, 774, 863, 1054
TaiI ACGT 1 cut(s) 159
TaqI TCGA 4 cut(s) 309, 568, 881, 932
TasI AATT 7 cut(s) 141, 435, 577, 664, 856, 1116, 1333
TatI WGTACW 1 cut(s) 863
TauI GCSGC 5 cut(s) 56, 59, 131, 222, 467
TfiI GAWTC 2 cut(s) 137, 1244
Tru1I TTAA 3 cut(s) 663, 993, 1336
Tru9I TTAA 3 cut(s) 663, 993, 1336
TscAI CASTG 3 cut(s) 289, 777, 1084
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 4 cut(s) 228, 467, 502, 1260
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 8 cut(s) 77, 305, 422, 462, 474, 525, 531, 929
TspGWI ACGGA 1 cut(s) 1296
TspRI CASTG 3 cut(s) 289, 777, 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
ZrmI AGTACT 1 cut(s) 865
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.