Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006374

Physical Location & Seq

Genomic Coordinates Forward (+)

33527481 .. 33533462

Gene Structure 5982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g43290.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGAGATATACTGTGGTTTTGGGAGTTCATACTCTCATATGGGTATTGCTCACTGGTGCTTTTTACTGCGAAAAGCCTTCTGTGGTGAACATTGGAGCCATTTTTACTTTTGACTCTGTTATAGGTAGAGTTGCAAAGCCAGCTATGCAAGCAGCAGTTTCCGATGTTAATGCAGATTCAGGAATACTCAAAGGCACAGAACTGAAGTTGTTTATGGAGGATGCAAATTGTAGTGCGTTCTTGGCATCTGTTGAAGCTTTTCAGGTACTTGACAAAGATATAGTGGCCATAATTGGTCCGCAGTCCTCTGCAATAGCTCATATGATCTCTGAGATTGCTAATGGTCTTCAAGTACCTCTTATCTCATATGCTGCCACTGATCCAACTCTGTCTGCTCTTCAGTTCCCTTACTTCTTCCGAACTACGCGAAGTGATGGCTATCAAATGGCTGCCATGGCTGGTTTGATAGATTACTATGAGTGGAAACAGGTAATTGCTGTCTTTGTGGATGACCAATATGGGAGGAATGGAATATCTGCTTTAGGTGATGAACTTCAGGGGAAAATGTCAAAAATTGCTTATAAGTTGGCTTTGCCTGTCGAATTTAATCAAAGTTACCTCACTGATTTGCTCAATAAATCCAAATTGCTTGGCCCTCGTGTCTATGTTGTTCACATTAATCCTGATCCCGGGTTGAGGATCTTTCATGTTGCCAAAGGACTTCAAATGATGACCACTGACTATGTGTGGTTTGCAACGGACTGGCTTTCTACTACCATTGATTCATTCTCTCCAATGAATCGAACTTCATTAGCTGTTCTTAATGGTGTAGTTGCACTACGTCAACATACCCCACAGTCCAATAAAAAGAGTGCATATATGTCTAGGTGGAAAAAAATGCAGCAGGAAGGTTTAGCAAGATCTGAGTTAAACGTCTATGGACTATATGCTTATGATACAGTGTGGACAGTGGCGAAGGCGATTGAACGTTTTATAGATGAACATGAAAATATTTCATTTTCTGTCCTTGACAAGTTACTAAAATTGGAACCATCTGAAATTCAGCTGAGGAAGCTTAAAATATTTGATGGTGGATCTCTTCTTCGAGAGAAGTTATTGGAGACAAATATGAGTGGTTTAACTGGTCAGGTTCAATTTAATCAAGACAGAAACATTGTTAGTGGTGGTTATGATGTTATCAATATTGAGAAAATGGCAATTCATACAGTTGGTTTTTGGTCTAATTATTCAGGGTTTTCAGTTTCACCTCCAGAAACTGTTAAAAGAGGGAGAGTTAGCTATCTCCCACTGGATCAGAAGCTTGGAAATGTTACTTGGCCAGGTGGAAATACAGTCACGCCACGTGGTTGGGTGATCACAGATGATGAACAACCATTGAGAATTGGAGTGCCAAAAAGAGTGAGTTTTGTTGAATTTGCTACAGAAAAGAACAACAGCCACAAGCTTGAAGGATACTGTATTGATGTCTTTTTGGCAGCACGGAAGTTAGTTCCTTATGATGTTCCTTACATATTTGTACCTTTTGGGGATGGTCAGTCTAATCCCAGTTATGATCAGCTTGTGAAGATGGTGGCACAAAATGTATTTGATGCTGCTGTTGGGGACATTGCAATTGTGAAAAACCGGACAATGATTGTGGATTTTTCTCAGCCTTATGCTACCACTGGGTTAGTCATAGTGGCGCCCGTTGAAAATTCAAAGTCAAATGCTTGGGTCTTTCTTCAACCTTTTACCTGGGAGCTGTGGTCTGTCACAGCAGCTTCGTTTGTGATTTTTGCTGTGGTTATGTGGACTCTTGAGCATCGAGTCAATGATGATTTTCGAGGTCCCCCTAAGAAGCAGCTTGCTACAATGTTCCTGTTCAGCTTCTCAACACTTTTCAAGAAAAATCAAGAAGATACTGTGAGCCCACTGGGGCGGATAGTGATGGTGATGTGGCTTTTCCTGTTGATGGTAATCACATCAAGCTATACTGCAAACTTGACTTCAATCCTTACGGTTCAGCAGCTTTCATCACCCATCACTGGAATTGATAGCTTGATCGCAAGCAATTTGCCCATAGGGTACCAAGTAGGTTCATTTGCTTATAACTATCTGACTGAAACCCTCTACATTCCTAGTTCAAGACTTGTTCCTCTAGGTTCCCCAGCAGAGTATGAGAGAGCACTACGGCAAGGACCAGATAATGGAGGGGTGGGAGCTGTTATAGATGAGCTACTGTATATTGAATTGTTTCTCTCAAGGCTAACAGACTTTGGGATTATTGGGCAAACATTTACCAGGAGCGGATGGGGATTTGCTTTTCAAAAAGATTCTCCCCTAGCTGTAGACATGTCGACTGCAATCTTGAAACTTTCTGAGAATGGAGAGCTTCAGAAGATCCACGAGAAATGGTTTTGTAAGATGGGTTGTCCTGGTGATAAGGATCAGGACGTTGAGCCTAACCAACTCCACTTGATCAGCTTCTGGGGTTTATATCTATTATGTGGTGCCTTCTCTGTTGCTGCATTTGTAGTGTTTCTGATGAGAATGATTTACCAATTTGTCCAGTACAAAAGACGACAAGTAAATCCTCCTTCTCCTCTATCCAGAAGCTCATCGAATACTCAATGTTCTCAGGTCATATCTAACTTTGTGGACTTCGTTGATGAGAAGGAAGAAGCTATCAAGAGAATGTTTCAGCGTGATAATCCTCAAGTTCAGGTTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009506 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030054 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

911

Amino Acids

101.8

Weight (kDa)

6.09

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	29 - 330	4.6e-15	Periplasmic binding protein
ANF_receptor	PF01094	45 - 403	4.9e-86	Receptor family ligand binding region
SBP_bac_3	PF00497	479 - 806	3.1e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan-Glu_bd	PF10613	481 - 569	5.2e-10	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	585 - 837	4e-34	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32400
fragaria_vesca	FvH4_6g43290 FvH4_6g43290 FvH4_6g43290 FvH4_6g43290
malus_domestica	MD09G1070000.v1.1 MD09G1108300.v1.1 MD17G1096200.v1.1
prunus_persica	Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1
pyrus_communis	pycom09g03020 pycom09g03080 pycom17g09230
rosa_chinensis	RchiOBHm_Chr2g0159561
rosa_laevigata	RLG00000021166
rosa_multiflora	Rmu_sc0012414.1_g000014 Rmu_sc0012414.1_g000015
rosa_roxburghii	Rroxscaffold_2G00090400
rosa_rugosa	Rorug02G0476900 Rorug02G0476900
rosa_samantha	Rh2AG543800 Rh2AG544100 Rh2BG556900 Rh2CG527100 Rh2DG565900
rosa_wichuraiana	Rw2G044980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	582, 2109
Acc65I	GGTACC	1 cut(s)	2085
AccB1I	GGYRCC	3 cut(s)	1702, 2085, 2510
AccB7I	CCANNNNNTGG	1 cut(s)	2207
AccBSI	CCGCTC	1 cut(s)	2307
AccI	GTMKAC	2 cut(s)	2349, 2357
AccII	CGCG	1 cut(s)	427
AciI	CCGC	3 cut(s)	299, 1939, 2307
AclI	AACGTT	1 cut(s)	988
AclWI	GGATC	7 cut(s)	374, 680, 707, 1102, 1320, 2395, 2454
AcoI	YGGCCR	2 cut(s)	285, 1337
AcsI	RAATTY	4 cut(s)	602, 1059, 1433, 1714
AcuI	CTGAAG	4 cut(s)	224, 383, 539, 2378
AcvI	CACGTG	1 cut(s)	1364
AcyI	GRCGYC	1 cut(s)	1703
AfaI	GTAC	5 cut(s)	267, 354, 1539, 2087, 2573
AfiI	CCNNNNNNNGG	5 cut(s)	689, 696, 1972, 2045, 2207
AflIII	ACRYGT	1 cut(s)	2352
AjnI	CCWGG	4 cut(s)	1339, 1754, 2300, 2434
AjuI	GAANNNNNNNTTGG	2 cut(s)	1318, 1350
Alw21I	GWGCWC	1 cut(s)	2188
Alw26I	GTCTC	1 cut(s)	1115
AlwI	GGATC	7 cut(s)	374, 680, 707, 1102, 1320, 2395, 2454
AlwNI	CAGNNNCTG	2 cut(s)	1277, 2487
Ama87I	CYCGRG	1 cut(s)	689
AoxI	GGCC	3 cut(s)	285, 652, 1337
ApoI	RAATTY	4 cut(s)	602, 1059, 1433, 1714
AseI	ATTAAT	1 cut(s)	678
Asp700I	GAANNNNTTC	2 cut(s)	258, 2253
Asp718I	GGTACC	1 cut(s)	2085
AspLEI	GCGC	1 cut(s)	1705
AspS9I	GGNCC	4 cut(s)	296, 653, 1847, 2198
AsuC2I	CCSGG	2 cut(s)	690, 691
AsuHPI	GGTGA	7 cut(s)	97, 557, 1257, 1384, 1963, 2028, 2450
AvaI	CYCGRG	1 cut(s)	689
AvaII	GGWCC	3 cut(s)	296, 1847, 2198
BalI	TGGCCA	2 cut(s)	287, 1339
BanI	GGYRCC	3 cut(s)	1702, 2085, 2510
BanII	GRGCYC	1 cut(s)	1931
BauI	CACGAG	2 cut(s)	657, 2405
BbrPI	CACGTG	1 cut(s)	1364
BbsI	GAAGAC	1 cut(s)	338
Bbv12I	GWGCWC	1 cut(s)	2188
BbvCI	CCTCAGC	1 cut(s)	1067
BceAI	ACGGC	1 cut(s)	2207
BcgI	CGANNNNNNTGC	2 cut(s)	152, 186
BciT130I	CCWGG	4 cut(s)	1341, 1756, 2302, 2436
BciVI	GTATCC	1 cut(s)	1466
BclI	TGATCA	3 cut(s)	1374, 1573, 2478
BcnI	CCSGG	2 cut(s)	690, 691
BcoDI	GTCTC	1 cut(s)	1115
BfaI	CTAG	4 cut(s)	885, 2139, 2159, 2342
BfmI	CTRYAG	2 cut(s)	1440, 2346
BfoI	RGCGCY	1 cut(s)	1706
BfuI	GTATCC	1 cut(s)	1466
BglII	AGATCT	1 cut(s)	920
Bme1390I	CCNGG	6 cut(s)	690, 691, 1341, 1756, 2302, 2436
Bme18I	GGWCC	3 cut(s)	296, 1847, 2198
BmeT110I	CYCGRG	1 cut(s)	689
BmgT120I	GGNCC	4 cut(s)	296, 653, 1847, 2198
BmiI	GGNNCC	7 cut(s)	97, 1050, 1704, 1849, 2087, 2164, 2512
BmrFI	CCNGG	6 cut(s)	690, 691, 1341, 1756, 2302, 2436
BmrI	ACTGGG	3 cut(s)	1560, 1695, 1943
BmsI	GCATC	4 cut(s)	211, 254, 1600, 1831
BmuI	ACTGGG	3 cut(s)	1560, 1695, 1943
BpiI	GAAGAC	1 cut(s)	338
BpmI	CTGGAG	1 cut(s)	1254
Bpu10I	CCTNAGC	1 cut(s)	1067
BpuEI	CTTGAG	3 cut(s)	1838, 2245, 2700
BpuMI	CCSGG	2 cut(s)	690, 691
BsaAI	YACGTR	1 cut(s)	1364
BsaBI	GATNNNNATC	3 cut(s)	438, 1976, 2445
BsaHI	GRCGYC	1 cut(s)	1703
BsaJI	CCNNGG	3 cut(s)	453, 689, 1755
BsaWI	WCCGGW	1 cut(s)	1644
BsaXI	ACNNNNNCTCC	2 cut(s)	1751, 1781
Bsc4I	CCNNNNNNNGG	5 cut(s)	689, 696, 1972, 2045, 2207
Bse1I	ACTGG	9 cut(s)	58, 767, 1147, 1314, 1566, 1690, 1938, 2050, 2569
Bse3DI	GCAATG	1 cut(s)	1626
Bse8I	GATNNNNATC	3 cut(s)	438, 1976, 2445
BseBI	CCWGG	4 cut(s)	1341, 1756, 2302, 2436
BseDI	CCNNGG	3 cut(s)	453, 689, 1755
BseGI	GGATG	4 cut(s)	226, 514, 1555, 2315
BseJI	GATNNNNATC	3 cut(s)	438, 1976, 2445
BseLI	CCNNNNNNNGG	5 cut(s)	689, 696, 1972, 2045, 2207
BseMI	GCAATG	1 cut(s)	1626
BseMII	CTCAG	6 cut(s)	321, 915, 1058, 1682, 2370, 2651
BseNI	ACTGG	9 cut(s)	58, 767, 1147, 1314, 1566, 1690, 1938, 2050, 2569
BseRI	GAGGAG	1 cut(s)	2592
BseYI	CCCAGC	1 cut(s)	2167
Bsh1236I	CGCG	1 cut(s)	427
BshFI	GGCC	3 cut(s)	287, 654, 1339
BshNI	GGYRCC	3 cut(s)	1702, 2085, 2510
BsiHKAI	GWGCWC	1 cut(s)	2188
BsiHKCI	CYCGRG	1 cut(s)	689
BsiSI	CCGG	2 cut(s)	690, 1645
BslFI	GGGAC	2 cut(s)	1637, 1833
BslI	CCNNNNNNNGG	5 cut(s)	689, 696, 1972, 2045, 2207
BsmAI	GTCTC	1 cut(s)	1115
BsmFI	GGGAC	2 cut(s)	1637, 1833
BsnI	GGCC	3 cut(s)	287, 654, 1339
BsoBI	CYCGRG	1 cut(s)	689
Bsp1286I	GDGCHC	2 cut(s)	1931, 2188
Bsp19I	CCATGG	1 cut(s)	453
BspACI	CCGC	3 cut(s)	299, 1939, 2307
BspANI	GGCC	3 cut(s)	287, 654, 1339
BspCNI	CTCAG	6 cut(s)	322, 916, 1059, 1681, 2371, 2650
BspFNI	CGCG	1 cut(s)	427
BspLI	GGNNCC	7 cut(s)	97, 1050, 1704, 1849, 2087, 2164, 2512
BspPI	GGATC	7 cut(s)	374, 680, 707, 1102, 1320, 2395, 2454
BspQI	GCTCTTC	1 cut(s)	402
BspT107I	GGYRCC	3 cut(s)	1702, 2085, 2510
BsrBI	CCGCTC	1 cut(s)	2307
BsrDI	GCAATG	1 cut(s)	1626
BsrI	ACTGG	9 cut(s)	58, 767, 1147, 1314, 1566, 1690, 1938, 2050, 2569
BssECI	CCNNGG	3 cut(s)	453, 689, 1755
BssNI	GRCGYC	1 cut(s)	1703
BssSI	CACGAG	2 cut(s)	657, 2405
BssT1I	CCWWGG	1 cut(s)	453
Bst2BI	CACGAG	2 cut(s)	657, 2405
Bst2UI	CCWGG	4 cut(s)	1341, 1756, 2302, 2436
Bst6I	CTCTTC	2 cut(s)	402, 1104
BstACI	GRCGYC	1 cut(s)	1703
BstBAI	YACGTR	1 cut(s)	1364
BstC8I	GCNNGC	4 cut(s)	141, 150, 1866, 2068
BstDEI	CTNAG	7 cut(s)	330, 924, 1067, 1668, 1854, 2379, 2637
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	4 cut(s)	226, 514, 1555, 2315
BstFNI	CGCG	1 cut(s)	427
BstH2I	RGCGCY	1 cut(s)	1706
BstHHI	GCGC	1 cut(s)	1705
BstMAI	GTCTC	1 cut(s)	1115
BstMWI	GCNNNNNNNGC	6 cut(s)	140, 145, 149, 242, 455, 1072
BstNI	CCWGG	4 cut(s)	1341, 1756, 2302, 2436
BstNSI	RCATGY	1 cut(s)	2356
BstSCI	CCNGG	6 cut(s)	688, 689, 1339, 1754, 2300, 2434
BstSFI	CTRYAG	2 cut(s)	1440, 2346
BstUI	CGCG	1 cut(s)	427
BstV2I	GAAGAC	1 cut(s)	338
BstX2I	RGATCY	4 cut(s)	699, 920, 1094, 2400
BstXI	CCANNNNNNTGG	1 cut(s)	1368
BstYI	RGATCY	4 cut(s)	699, 920, 1094, 2400
BsuI	GTATCC	1 cut(s)	1466
BsuRI	GGCC	3 cut(s)	287, 654, 1339
BtgI	CCRYGG	1 cut(s)	453
BtsCI	GGATG	4 cut(s)	226, 514, 1555, 2315
Cac8I	GCNNGC	4 cut(s)	141, 150, 1866, 2068
CaiI	CAGNNNCTG	2 cut(s)	1277, 2487
CfoI	GCGC	1 cut(s)	1705
Cfr13I	GGNCC	4 cut(s)	296, 653, 1847, 2198
Cfr9I	CCCGGG	1 cut(s)	689
Csp6I	GTAC	5 cut(s)	266, 353, 1538, 2086, 2572
CspCI	CAANNNNNGTGG	2 cut(s)	1638, 1673
CviAII	CATG	4 cut(s)	454, 707, 1004, 2353
CviQI	GTAC	5 cut(s)	266, 353, 1538, 2086, 2572
DdeI	CTNAG	7 cut(s)	330, 924, 1067, 1668, 1854, 2379, 2637
DinI	GGCGCC	1 cut(s)	1704
EaeI	YGGCCR	2 cut(s)	285, 1337
Eam1104I	CTCTTC	2 cut(s)	402, 1104
EarI	CTCTTC	2 cut(s)	402, 1104
EciI	GGCGGA	1 cut(s)	1954
Eco130I	CCWWGG	1 cut(s)	453
Eco24I	GRGCYC	1 cut(s)	1931
Eco47I	GGWCC	3 cut(s)	296, 1847, 2198
Eco57I	CTGAAG	4 cut(s)	224, 383, 539, 2378
Eco72I	CACGTG	1 cut(s)	1364
Eco88I	CYCGRG	1 cut(s)	689
EcoO109I	RGGNCCY	1 cut(s)	1847
EcoRII	CCWGG	4 cut(s)	1339, 1754, 2300, 2434
EcoT14I	CCWWGG	1 cut(s)	453
EcoT38I	GRGCYC	1 cut(s)	1931
EgeI	GGCGCC	1 cut(s)	1704
EheI	GGCGCC	1 cut(s)	1704
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	4 cut(s)	457, 710, 1007, 2356
FalI	AAGNNNNNCTT	2 cut(s)	342, 374
FaqI	GGGAC	2 cut(s)	1637, 1833
FatI	CATG	4 cut(s)	453, 706, 1003, 2352
FauNDI	CATATG	3 cut(s)	38, 321, 367
FbaI	TGATCA	3 cut(s)	1374, 1573, 2478
FblI	GTMKAC	2 cut(s)	2349, 2357
FokI	GGATG	4 cut(s)	233, 521, 1562, 2322
FriOI	GRGCYC	1 cut(s)	1931
FspBI	CTAG	4 cut(s)	885, 2139, 2159, 2342
GlaI	GCGC	1 cut(s)	1704
GsaI	CCCAGC	1 cut(s)	2171
GsuI	CTGGAG	1 cut(s)	1254
HaeII	RGCGCY	1 cut(s)	1706
HaeIII	GGCC	3 cut(s)	287, 654, 1339
HapII	CCGG	2 cut(s)	690, 1645
HhaI	GCGC	1 cut(s)	1705
Hin1I	GRCGYC	1 cut(s)	1703
Hin1II	CATG	4 cut(s)	457, 710, 1007, 2356
Hin6I	GCGC	1 cut(s)	1703
HinP1I	GCGC	1 cut(s)	1703
HincII	GTYRAC	2 cut(s)	845, 2358
HindII	GTYRAC	2 cut(s)	845, 2358
HindIII	AAGCTT	4 cut(s)	255, 1073, 1319, 1463
HinfI	GANTC	7 cut(s)	113, 176, 782, 799, 1813, 1827, 2333
HpaII	CCGG	2 cut(s)	690, 1645
HphI	GGTGA	7 cut(s)	97, 557, 1257, 1384, 1963, 2028, 2450
Hpy166II	GTNNAC	8 cut(s)	88, 673, 845, 966, 1812, 2350, 2358, 2659
Hpy8I	GTNNAC	8 cut(s)	88, 673, 845, 966, 1812, 2350, 2358, 2659
HpyAV	CCTTC	7 cut(s)	87, 902, 970, 1463, 2524, 2607, 2668
HpyCH4IV	ACGT	5 cut(s)	841, 933, 988, 1363, 2454
HpyF10VI	GCNNNNNNNGC	6 cut(s)	140, 145, 149, 242, 455, 1072
HpyF3I	CTNAG	7 cut(s)	330, 924, 1067, 1668, 1854, 2379, 2637
HpySE526I	ACGT	5 cut(s)	841, 933, 988, 1363, 2454
Hsp92I	GRCGYC	1 cut(s)	1703
Hsp92II	CATG	4 cut(s)	457, 710, 1007, 2356
HspAI	GCGC	1 cut(s)	1703
KasI	GGCGCC	1 cut(s)	1702
KpnI	GGTACC	1 cut(s)	2089
Ksp22I	TGATCA	3 cut(s)	1374, 1573, 2478
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	4 cut(s)	95, 1759, 2219, 2304
LweI	GCATC	4 cut(s)	211, 254, 1600, 1831
MaeI	CTAG	4 cut(s)	885, 2139, 2159, 2342
MaeII	ACGT	5 cut(s)	841, 933, 988, 1363, 2454
MaeIII	GTNAC	5 cut(s)	614, 1035, 1330, 1354, 1771
MbiI	CCGCTC	1 cut(s)	2307
MfeI	CAATTG	1 cut(s)	1632
MflI	RGATCY	4 cut(s)	699, 920, 1094, 2400
MhlI	GDGCHC	2 cut(s)	1931, 2188
MlsI	TGGCCA	2 cut(s)	287, 1339
MluNI	TGGCCA	2 cut(s)	287, 1339
Mly113I	GGCGCC	1 cut(s)	1703
MlyI	GAGTC	3 cut(s)	107, 1807, 1836
MmeI	TCCRAC	1 cut(s)	407
Mox20I	TGGCCA	2 cut(s)	287, 1339
MroXI	GAANNNNTTC	2 cut(s)	258, 2253
MscI	TGGCCA	2 cut(s)	287, 1339
MseI	TTAA	9 cut(s)	168, 606, 678, 822, 929, 1077, 1139, 1158, 1281
Msp20I	TGGCCA	2 cut(s)	287, 1339
MspA1I	CMGCKG	1 cut(s)	1066
MspI	CCGG	2 cut(s)	690, 1645
MspR9I	CCNGG	6 cut(s)	690, 691, 1341, 1756, 2302, 2436
MunI	CAATTG	1 cut(s)	1632
MvaI	CCWGG	4 cut(s)	1341, 1756, 2302, 2436
MvnI	CGCG	1 cut(s)	427
MwoI	GCNNNNNNNGC	6 cut(s)	140, 145, 149, 242, 455, 1072
NarI	GGCGCC	1 cut(s)	1703
NciI	CCSGG	2 cut(s)	690, 691
NcoI	CCATGG	1 cut(s)	453
NdeI	CATATG	3 cut(s)	38, 321, 367
NlaIII	CATG	4 cut(s)	457, 710, 1007, 2356
NlaIV	GGNNCC	7 cut(s)	97, 1050, 1704, 1849, 2087, 2164, 2512
NmuCI	GTSAC	2 cut(s)	1354, 1771
NspI	RCATGY	1 cut(s)	2356
PciI	ACATGT	1 cut(s)	2352
PciSI	GCTCTTC	1 cut(s)	402
PdmI	GAANNNNTTC	2 cut(s)	258, 2253
PfeI	GAWTC	4 cut(s)	176, 782, 799, 2333
PflMI	CCANNNNNTGG	1 cut(s)	2207
PleI	GAGTC	3 cut(s)	107, 1807, 1835
PluTI	GGCGCC	1 cut(s)	1706
PmaCI	CACGTG	1 cut(s)	1364
PmlI	CACGTG	1 cut(s)	1364
PpsI	GAGTC	3 cut(s)	107, 1807, 1835
Ppu21I	YACGTR	1 cut(s)	1364
PpuMI	RGGWCCY	1 cut(s)	1847
PscI	ACATGT	1 cut(s)	2352
PshBI	ATTAAT	1 cut(s)	678
PsiI	TTATAA	2 cut(s)	582, 2109
Psp1406I	AACGTT	1 cut(s)	988
Psp5II	RGGWCCY	1 cut(s)	1847
Psp6I	CCWGG	4 cut(s)	1339, 1754, 2300, 2434
PspCI	CACGTG	1 cut(s)	1364
PspFI	CCCAGC	1 cut(s)	2167
PspGI	CCWGG	4 cut(s)	1339, 1754, 2300, 2434
PspN4I	GGNNCC	7 cut(s)	97, 1050, 1704, 1849, 2087, 2164, 2512
PspPI	GGNCC	4 cut(s)	296, 653, 1847, 2198
PspPPI	RGGWCCY	1 cut(s)	1847
PstNI	CAGNNNCTG	2 cut(s)	1277, 2487
PsuI	RGATCY	4 cut(s)	699, 920, 1094, 2400
PvuII	CAGCTG	1 cut(s)	1066
RsaI	GTAC	5 cut(s)	267, 354, 1539, 2087, 2573
RsaNI	GTAC	5 cut(s)	266, 353, 1538, 2086, 2572
SalI	GTCGAC	1 cut(s)	2356
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	9 cut(s)	168, 606, 678, 822, 929, 1077, 1139, 1158, 1281
Sau96I	GGNCC	4 cut(s)	296, 653, 1847, 2198
SchI	GAGTC	3 cut(s)	107, 1807, 1836
ScrFI	CCNGG	6 cut(s)	690, 691, 1341, 1756, 2302, 2436
SduI	GDGCHC	2 cut(s)	1931, 2188
SfaNI	GCATC	4 cut(s)	211, 254, 1600, 1831
SfcI	CTRYAG	2 cut(s)	1440, 2346
SfoI	GGCGCC	1 cut(s)	1704
SinI	GGWCC	3 cut(s)	296, 1847, 2198
SmaI	CCCGGG	1 cut(s)	691
SmlI	CTYRAG	3 cut(s)	1817, 2260, 2715
SmoI	CTYRAG	3 cut(s)	1817, 2260, 2715
SsiI	CCGC	3 cut(s)	299, 1939, 2307
SspDI	GGCGCC	1 cut(s)	1702
SspI	AATATT	3 cut(s)	1012, 1083, 1204
SspMI	CTAG	4 cut(s)	885, 2139, 2159, 2342
StyD4I	CCNGG	6 cut(s)	688, 689, 1339, 1754, 2300, 2434
StyI	CCWWGG	1 cut(s)	453
TaiI	ACGT	5 cut(s)	844, 936, 991, 1366, 2457
TaqI	TCGA	7 cut(s)	600, 802, 1105, 1825, 1843, 2357, 2621
TatI	WGTACW	1 cut(s)	2571
TfiI	GAWTC	4 cut(s)	176, 782, 799, 2333
Tru1I	TTAA	9 cut(s)	168, 606, 678, 822, 929, 1077, 1139, 1158, 1281
Tru9I	TTAA	9 cut(s)	168, 606, 678, 822, 929, 1077, 1139, 1158, 1281
TseFI	GTSAC	2 cut(s)	1354, 1771
Tsp45I	GTSAC	2 cut(s)	1354, 1771
TspGWI	ACGGA	2 cut(s)	773, 1516
TspMI	CCCGGG	1 cut(s)	689
Van91I	CCANNNNNTGG	1 cut(s)	2207
VpaK11BI	GGWCC	3 cut(s)	296, 1847, 2198
VspI	ATTAAT	1 cut(s)	678
XapI	RAATTY	4 cut(s)	602, 1059, 1433, 1714
XceI	RCATGY	1 cut(s)	2356
XmaI	CCCGGG	1 cut(s)	689
XmiI	GTMKAC	2 cut(s)	2349, 2357
XmnI	GAANNNNTTC	2 cut(s)	258, 2253
XspI	CTAG	4 cut(s)	885, 2139, 2159, 2342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.