Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0006374

Physical Location & Seq

Genomic Coordinates Forward (+)

72500308 .. 72505931

Gene Structure 5624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021166

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGAGATATAGTGGGGTTTTGGCACTTCATACTCTCATATGGGTATTGCTCACTGCTTCTTTTTACTGCCAAAAGCCTTCTGTGGTGAACATTGGAGCTATTTTTACTTTTGACTCTGTTATTGGTAGAGTTGCAAAGCCAGCTATGGAAGCAGCAGTTTCTGATGTTAATGCAGATTCAAGAATACTCAAAGGCACAAAACTGAAGTTGTTTATGGAGAATGCAAATTGTAGTGCGTTCTTGGGATCCATTGAAGCTTTTCAGGTTCTTGACAAAGGTGTAGTGGCCATAATTGGTCCACAGTCCTCTGCAATAGCTCATATGATCTCTGCGATTGCTAATGGTCTTCAAGTACCTCTTATCTCATATGCTGCCACTGATCCAACACTGTCTGCTCTTCAGTTCCCTTACTTCCTCCGAGCTACACAAAGTGATGGCTATCAAATGGCGGCCATGGCTGGTTTGATTGATTACTATGGGTGGAAACAGGTAATTGCTGTCTTTGTGGATGACGAATATGGGAGGAATGGAATATCTGCTTTTGGTGATGAACTTGAGAGAAAAATGATAAAAATTGCATATAAGTTGGCTTTGCCTGTTCAATTCAATCAAAGTTACCTCACTGATTTGCTCAATAAATCCAAATTGCTTGGCCCTCGTGTCTACGTTGTTCACATTGATCCTGACCCCAGGTTGAGAATCTTTCAAGTTGCCAAAGAACTTCAAATGATGACCAGTGACTACGTGTGGTTTGCAACAGATTGGCTCTCTACTACCATTGATTCATTCTCTCCAATGAATCGAACTTCGCTTGCTGTTCTTGATGGTGTAGTTGCACTGCGTCAACATACCCCACAGTCCAATCGAAAGAGTGCATTTATGTCTAGGTGGAAAGAAATGCAGAAAGAAGGTTTAGCGAATTCTGAGTTAAATGTCTATGGACTACGTGCTTATGATGCAGTCTGGACAGTTGCAAAGTCTATTGGAAGATTTATAGATGAACATGAAAATATCTCATTCTCTGTCCTTGACAAATTACTAGAATTGAAACCGTCTGAAATTCAGCTGACGAAGCTTAAAATATTTGATGGTGGACCTCTTCTTAGAAAGAAGTTATTGGAGACAAATATGAGTGGTTTAGCTGGTGAGGTTCGATTTAATCAAGAAGACAGAAACATTGTTAGTGGTGGTTATGATGTCATTAATATTGAGAAGATGGCAATTCATACAGTCGGTTTTTGGTCTAATTATTCAGGGTTTTCAGTTTCACCTCCTGTAACTGTTAAAAGAGGGACAAGCAGCTATTCCCCACTGGATCAGAAGCTTGGCTATGTTACTTGGCCAGGTGGAAATACAGTAACGCCACGTGGTTGGGTGATTGCAGACGATGAACAACCATTGAGAATTGGAGTGCCAAAAAGAGTGAGTTTTGTTGAATTCGCTAGAGAACTGAACAACAGCCACAAGATCGAAGGATACTGTATTGATGTCTTCCTGGCAGCACGAAAGTTAGTTCCGTATGATATTCCTTACAGATTTGTACCTTTTGGGAATGGTCAGTCCAATCCCAGTTATGATGAGCTTGTGAAGATGGTTGCACAAAATACCATTACAAGTACAATGCTTCCCGAAACTAAATATCTTCAATGTTATCTTAATGCAGCCATTTCTCTTAGCTTAACAGAAACTTGGTTCTTATGCCATTCTACTGTTTCTTATTGCAGGTTCAGTTTCTCAACACTTTTCAAGAAAAATCAAGAAGATACAGTGAGTCCACTTGGGCGGATAGTGATGGTGGTATGGCTTTTCCTGTTGATGGTAATCACGTCAAGCTATACTGCAAGCTTGACTTCAATCCTTACAGTTCAGCAGATTTCGTCACCCATCACTGGAATTGATAGCTTGATTGCTAGCAATTGGCCGATAGGGTACCAAGTAGGGTCATTTGCTTATAGCTATCTGACTGAAAGCCTCTACATTCCTAGTTCAAGACTTGTTCCTCTAGGTTCCCCAGAAGAGTATGAAAGAGCACTACGGCAAGGGCCAGACAATGGAGGGGTGGGAGCTGTGATAGATGAGCTAACTTATATTGAATTGTTTCTCTCAAGGCCAACGGACTTTGGGATTATTGGGCAAACATTTACCAGGAGCGGATGGGGATTTGCTTTTCAAAAAGATTCTCCCTTAGCTGTTGACATGTCAACTGCAATCTTGAAACTTTCTGAGAATGGAGAGCTTCGAAAGATCCACGAGAAATGGTTTTGTAAGATGGGTTGTCCTGGTGACAAGGATCAGGACACTGAGCCTAACCAACTCCACTTGATCAGCTTCTGGGGTTTATATCTATTATGTGGTGCCTTCTCTGTCATTGCATTTGTAGTGTTTCTGATAAGAATGATTTACCAATTTGTCCGGTACAAAAAACGGCAAGTAAATCATCCTTCTCCTGTATCCACAAGCTCATCCAATACTCAATGTTCTCAGGTCATATCTAACTTTGTTGATTTCGTTGATGAAAAGGAAGAAGCTATCAAGAGAATGTTTCAGCATGATAATCCTCAAGTTCAGGATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009506 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030054 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

859

Amino Acids

96.04

Weight (kDa)

6.66

Isoelectric Point (pI)

37.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	29 - 327	2.5e-15	Periplasmic binding protein
ANF_receptor	PF01094	45 - 404	4.8e-83	Receptor family ligand binding region
Lig_chan	PF00060	572 - 785	8.3e-23	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32400
fragaria_vesca	FvH4_6g43290 FvH4_6g43290 FvH4_6g43290 FvH4_6g43290
malus_domestica	MD09G1070000.v1.1 MD09G1108300.v1.1 MD17G1096200.v1.1
prunus_persica	Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1
pyrus_communis	pycom09g03020 pycom09g03080 pycom17g09230
rosa_chinensis	RchiOBHm_Chr2g0159561
rosa_laevigata	RLG00000021166
rosa_multiflora	Rmu_sc0012414.1_g000014 Rmu_sc0012414.1_g000015
rosa_roxburghii	Rroxscaffold_2G00090400
rosa_rugosa	Rorug02G0476900 Rorug02G0476900
rosa_samantha	Rh2AG543800 Rh2AG544100 Rh2BG556900 Rh2CG527100 Rh2DG565900
rosa_wichuraiana	Rw2G044980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1713
Acc65I	GGTACC	1 cut(s)	1929
AccB1I	GGYRCC	2 cut(s)	1929, 2354
AccB7I	CCANNNNNTGG	1 cut(s)	2051
AccBSI	CCGCTC	1 cut(s)	2151
AccI	GTMKAC	1 cut(s)	663
AciI	CCGC	3 cut(s)	449, 1783, 2151
AclWI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2239, 2298
AcoI	YGGCCR	4 cut(s)	285, 450, 1340, 1919
AcsI	RAATTY	3 cut(s)	919, 1059, 1436
AcuI	CTGAAG	2 cut(s)	224, 383
AcvI	CACGTG	1 cut(s)	1367
AdeI	CACNNNGTG	1 cut(s)	431
AfaI	GTAC	5 cut(s)	354, 1542, 1618, 1931, 2417
AfiI	CCNNNNNNNGG	3 cut(s)	1816, 1889, 2051
AflIII	ACRYGT	2 cut(s)	744, 2196
AjiI	CACGTC	1 cut(s)	1827
AjnI	CCWGG	5 cut(s)	689, 1342, 1494, 2144, 2278
Alw21I	GWGCWC	1 cut(s)	2032
Alw26I	GTCTC	1 cut(s)	1115
AlwI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2239, 2298
AlwNI	CAGNNNCTG	2 cut(s)	161, 2331
AoxI	GGCC	7 cut(s)	285, 450, 652, 1340, 1919, 2042, 2108
ApeKI	GCWGC	5 cut(s)	152, 371, 1299, 1499, 1661
ApoI	RAATTY	3 cut(s)	919, 1059, 1436
AseI	ATTAAT	1 cut(s)	1203
Asp700I	GAANNNNTTC	2 cut(s)	258, 2097
Asp718I	GGTACC	1 cut(s)	1929
AspS9I	GGNCC	4 cut(s)	296, 653, 1094, 2042
AsuHPI	GGTGA	7 cut(s)	97, 557, 1157, 1260, 1387, 1872, 2294
AsuII	TTCGAA	1 cut(s)	2239
AsuNHI	GCTAGC	1 cut(s)	1910
AvaII	GGWCC	2 cut(s)	296, 1094
BalI	TGGCCA	2 cut(s)	287, 1342
BamHI	GGATCC	1 cut(s)	245
BanI	GGYRCC	2 cut(s)	1929, 2354
BauI	CACGAG	2 cut(s)	657, 2249
BbrPI	CACGTG	1 cut(s)	1367
BbsI	GAAGAC	3 cut(s)	338, 1173, 1483
Bbv12I	GWGCWC	1 cut(s)	2032
BbvI	GCAGC	5 cut(s)	164, 358, 1311, 1511, 1673
BceAI	ACGGC	2 cut(s)	2051, 2441
BciT130I	CCWGG	5 cut(s)	691, 1344, 1496, 2146, 2280
BciVI	GTATCC	2 cut(s)	1469, 2461
BclI	TGATCA	1 cut(s)	2322
BcoDI	GTCTC	1 cut(s)	1115
BfaI	CTAG	6 cut(s)	885, 1040, 1443, 1911, 1983, 2003
BfuAI	ACCTGC	1 cut(s)	1713
BfuI	GTATCC	2 cut(s)	1469, 2461
BisI	GCNGC	6 cut(s)	153, 372, 450, 1300, 1500, 1662
BlsI	GCNGC	6 cut(s)	154, 373, 451, 1301, 1501, 1663
Bme1390I	CCNGG	5 cut(s)	691, 1344, 1496, 2146, 2280
Bme18I	GGWCC	2 cut(s)	296, 1094
BmgBI	CACGTC	1 cut(s)	1827
BmgT120I	GGNCC	4 cut(s)	296, 653, 1094, 2042
BmiI	GGNNCC	4 cut(s)	247, 1931, 2008, 2356
BmrFI	CCNGG	5 cut(s)	691, 1344, 1496, 2146, 2280
BmrI	ACTGGG	1 cut(s)	1563
BmsI	GCATC	1 cut(s)	946
BmtI	GCTAGC	1 cut(s)	1914
BmuI	ACTGGG	1 cut(s)	1563
BpiI	GAAGAC	3 cut(s)	338, 1173, 1483
Bpu10I	CCTNAGC	1 cut(s)	2185
Bpu14I	TTCGAA	1 cut(s)	2239
BpuEI	CTTGAG	3 cut(s)	575, 2089, 2544
BsaAI	YACGTR	3 cut(s)	745, 947, 1367
BsaBI	GATNNNNATC	2 cut(s)	438, 1820
BsaJI	CCNNGG	2 cut(s)	453, 689
BsaWI	WCCGGW	1 cut(s)	2412
Bsc4I	CCNNNNNNNGG	3 cut(s)	1816, 1889, 2051
Bse1I	ACTGG	4 cut(s)	735, 1317, 1569, 1894
Bse3DI	GCAATG	1 cut(s)	2367
Bse8I	GATNNNNATC	2 cut(s)	438, 1820
BseBI	CCWGG	5 cut(s)	691, 1344, 1496, 2146, 2280
BseDI	CCNNGG	2 cut(s)	453, 689
BseGI	GGATG	4 cut(s)	514, 2159, 2437, 2462
BseJI	GATNNNNATC	2 cut(s)	438, 1820
BseLI	CCNNNNNNNGG	3 cut(s)	1816, 1889, 2051
BseMI	GCAATG	1 cut(s)	2367
BseMII	CTCAG	4 cut(s)	915, 2214, 2292, 2495
BseNI	ACTGG	4 cut(s)	735, 1317, 1569, 1894
BseXI	GCAGC	5 cut(s)	164, 358, 1311, 1511, 1673
BshFI	GGCC	7 cut(s)	287, 452, 654, 1342, 1921, 2044, 2110
BshNI	GGYRCC	2 cut(s)	1929, 2354
BsiHKAI	GWGCWC	1 cut(s)	2032
BsiSI	CCGG	1 cut(s)	2413
BslFI	GGGAC	1 cut(s)	1306
BslI	CCNNNNNNNGG	3 cut(s)	1816, 1889, 2051
BsmAI	GTCTC	1 cut(s)	1115
BsmFI	GGGAC	1 cut(s)	1306
BsmI	GAATGC	1 cut(s)	226
BsnI	GGCC	7 cut(s)	287, 452, 654, 1342, 1921, 2044, 2110
Bsp119I	TTCGAA	1 cut(s)	2239
Bsp1286I	GDGCHC	1 cut(s)	2032
Bsp143I	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
Bsp19I	CCATGG	1 cut(s)	453
BspACI	CCGC	3 cut(s)	449, 1783, 2151
BspANI	GGCC	7 cut(s)	287, 452, 654, 1342, 1921, 2044, 2110
BspCNI	CTCAG	4 cut(s)	916, 2215, 2293, 2494
BspLI	GGNNCC	4 cut(s)	247, 1931, 2008, 2356
BspMI	ACCTGC	1 cut(s)	1713
BspOI	GCTAGC	1 cut(s)	1914
BspPI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2239, 2298
BspQI	GCTCTTC	1 cut(s)	402
BspT104I	TTCGAA	1 cut(s)	2239
BspT107I	GGYRCC	2 cut(s)	1929, 2354
BsrBI	CCGCTC	1 cut(s)	2151
BsrDI	GCAATG	1 cut(s)	2367
BsrI	ACTGG	4 cut(s)	735, 1317, 1569, 1894
BssECI	CCNNGG	2 cut(s)	453, 689
BssMI	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
BssSI	CACGAG	2 cut(s)	657, 2249
BssT1I	CCWWGG	1 cut(s)	453
Bst2BI	CACGAG	2 cut(s)	657, 2249
Bst2UI	CCWGG	5 cut(s)	691, 1344, 1496, 2146, 2280
Bst6I	CTCTTC	3 cut(s)	402, 1104, 2010
BstBAI	YACGTR	3 cut(s)	745, 947, 1367
BstBI	TTCGAA	1 cut(s)	2239
BstC8I	GCNNGC	4 cut(s)	141, 813, 1843, 1912
BstDEI	CTNAG	7 cut(s)	924, 1103, 1673, 2185, 2223, 2301, 2481
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	4 cut(s)	514, 2159, 2437, 2462
BstKTI	GATC	9 cut(s)	248, 327, 382, 682, 1318, 1470, 2247, 2293, 2325
BstMAI	GTCTC	1 cut(s)	1115
BstMBI	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
BstMWI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
BstNI	CCWGG	5 cut(s)	691, 1344, 1496, 2146, 2280
BstNSI	RCATGY	1 cut(s)	2200
BstSCI	CCNGG	5 cut(s)	689, 1342, 1494, 2144, 2278
BstV1I	GCAGC	5 cut(s)	164, 358, 1311, 1511, 1673
BstV2I	GAAGAC	3 cut(s)	338, 1173, 1483
BstX2I	RGATCY	2 cut(s)	245, 2244
BstXI	CCANNNNNNTGG	1 cut(s)	1371
BstYI	RGATCY	2 cut(s)	245, 2244
BsuI	GTATCC	2 cut(s)	1469, 2461
BsuRI	GGCC	7 cut(s)	287, 452, 654, 1342, 1921, 2044, 2110
BtgI	CCRYGG	1 cut(s)	453
BtrI	CACGTC	1 cut(s)	1827
BtsCI	GGATG	4 cut(s)	514, 2159, 2437, 2462
BtsI	GCAGTG	2 cut(s)	51, 836
BveI	ACCTGC	1 cut(s)	1713
Cac8I	GCNNGC	4 cut(s)	141, 813, 1843, 1912
CaiI	CAGNNNCTG	2 cut(s)	161, 2331
Cfr13I	GGNCC	4 cut(s)	296, 653, 1094, 2042
CseI	GACGC	1 cut(s)	830
Csp6I	GTAC	5 cut(s)	353, 1541, 1617, 1930, 2416
CviAII	CATG	4 cut(s)	454, 1004, 2197, 2549
CviQI	GTAC	5 cut(s)	353, 1541, 1617, 1930, 2416
DdeI	CTNAG	7 cut(s)	924, 1103, 1673, 2185, 2223, 2301, 2481
DpnI	GATC	9 cut(s)	247, 326, 381, 681, 1317, 1469, 2246, 2292, 2324
DpnII	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
DraIII	CACNNNGTG	1 cut(s)	431
EaeI	YGGCCR	4 cut(s)	285, 450, 1340, 1919
Eam1104I	CTCTTC	3 cut(s)	402, 1104, 2010
EarI	CTCTTC	3 cut(s)	402, 1104, 2010
EciI	GGCGGA	1 cut(s)	1798
Eco130I	CCWWGG	1 cut(s)	453
Eco47I	GGWCC	2 cut(s)	296, 1094
Eco57I	CTGAAG	2 cut(s)	224, 383
Eco72I	CACGTG	1 cut(s)	1367
EcoRI	GAATTC	2 cut(s)	919, 1436
EcoRII	CCWGG	5 cut(s)	689, 1342, 1494, 2144, 2278
EcoT14I	CCWWGG	1 cut(s)	453
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	4 cut(s)	457, 1007, 2200, 2552
FalI	AAGNNNNNCTT	4 cut(s)	342, 374, 1834, 1866
FaqI	GGGAC	1 cut(s)	1306
FatI	CATG	4 cut(s)	453, 1003, 2196, 2548
FauNDI	CATATG	3 cut(s)	38, 321, 367
FbaI	TGATCA	1 cut(s)	2322
FblI	GTMKAC	1 cut(s)	663
Fnu4HI	GCNGC	6 cut(s)	153, 372, 450, 1300, 1500, 1662
FokI	GGATG	4 cut(s)	521, 2166, 2424, 2449
Fsp4HI	GCNGC	6 cut(s)	153, 372, 450, 1300, 1500, 1662
FspBI	CTAG	6 cut(s)	885, 1040, 1443, 1911, 1983, 2003
GluI	GCNGC	6 cut(s)	153, 372, 450, 1300, 1500, 1662
HaeIII	GGCC	7 cut(s)	287, 452, 654, 1342, 1921, 2044, 2110
HapII	CCGG	1 cut(s)	2413
HgaI	GACGC	1 cut(s)	830
Hin1II	CATG	4 cut(s)	457, 1007, 2200, 2552
HincII	GTYRAC	3 cut(s)	845, 2194, 2202
HindII	GTYRAC	3 cut(s)	845, 2194, 2202
HindIII	AAGCTT	4 cut(s)	255, 1073, 1322, 1843
HinfI	GANTC	7 cut(s)	113, 176, 699, 782, 799, 1771, 2177
HpaII	CCGG	1 cut(s)	2413
HphI	GGTGA	7 cut(s)	97, 557, 1157, 1260, 1387, 1872, 2294
Hpy166II	GTNNAC	9 cut(s)	88, 299, 664, 673, 845, 1094, 1775, 2194, 2202
Hpy188I	TCNGA	8 cut(s)	163, 419, 925, 1057, 1320, 1962, 2224, 2388
Hpy8I	GTNNAC	9 cut(s)	88, 299, 664, 673, 845, 1094, 1775, 2194, 2202
HpyAV	CCTTC	5 cut(s)	87, 902, 1466, 2368, 2451
HpyCH4IV	ACGT	5 cut(s)	666, 744, 946, 1366, 1826
HpyF10VI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
HpyF3I	CTNAG	7 cut(s)	924, 1103, 1673, 2185, 2223, 2301, 2481
HpySE526I	ACGT	5 cut(s)	666, 744, 946, 1366, 1826
Hsp92II	CATG	4 cut(s)	457, 1007, 2200, 2552
KpnI	GGTACC	1 cut(s)	1933
Ksp22I	TGATCA	1 cut(s)	2322
Kzo9I	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	3 cut(s)	95, 2063, 2148
Lsp1109I	GCAGC	5 cut(s)	164, 358, 1311, 1511, 1673
LweI	GCATC	1 cut(s)	946
MaeI	CTAG	6 cut(s)	885, 1040, 1443, 1911, 1983, 2003
MaeII	ACGT	5 cut(s)	666, 744, 946, 1366, 1826
MaeIII	GTNAC	7 cut(s)	614, 737, 1276, 1333, 1357, 1878, 2282
MalI	GATC	9 cut(s)	247, 326, 381, 681, 1317, 1469, 2246, 2292, 2324
MbiI	CCGCTC	1 cut(s)	2151
MboI	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
MfeI	CAATTG	1 cut(s)	1915
MflI	RGATCY	2 cut(s)	245, 2244
MhlI	GDGCHC	1 cut(s)	2032
MlsI	TGGCCA	2 cut(s)	287, 1342
MluNI	TGGCCA	2 cut(s)	287, 1342
MlyI	GAGTC	2 cut(s)	107, 1780
MmeI	TCCRAC	1 cut(s)	407
Mox20I	TGGCCA	2 cut(s)	287, 1342
MroXI	GAANNNNTTC	2 cut(s)	258, 2097
MscI	TGGCCA	2 cut(s)	287, 1342
MseI	TTAA	8 cut(s)	168, 929, 1077, 1158, 1203, 1284, 1656, 1679
Msp20I	TGGCCA	2 cut(s)	287, 1342
MspA1I	CMGCKG	1 cut(s)	1066
MspI	CCGG	1 cut(s)	2413
MspR9I	CCNGG	5 cut(s)	691, 1344, 1496, 2146, 2280
MunI	CAATTG	1 cut(s)	1915
Mva1269I	GAATGC	1 cut(s)	226
MvaI	CCWGG	5 cut(s)	691, 1344, 1496, 2146, 2280
MwoI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
NcoI	CCATGG	1 cut(s)	453
NdeI	CATATG	3 cut(s)	38, 321, 367
NdeII	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
NheI	GCTAGC	1 cut(s)	1910
NlaIII	CATG	4 cut(s)	457, 1007, 2200, 2552
NlaIV	GGNNCC	4 cut(s)	247, 1931, 2008, 2356
NmuCI	GTSAC	3 cut(s)	737, 1878, 2282
NspI	RCATGY	1 cut(s)	2200
NspV	TTCGAA	1 cut(s)	2239
PciI	ACATGT	1 cut(s)	2196
PciSI	GCTCTTC	1 cut(s)	402
PctI	GAATGC	1 cut(s)	226
PdmI	GAANNNNTTC	2 cut(s)	258, 2097
PfeI	GAWTC	5 cut(s)	176, 699, 782, 799, 2177
PflMI	CCANNNNNTGG	1 cut(s)	2051
PkrI	GCNGC	6 cut(s)	154, 373, 451, 1301, 1501, 1663
PleI	GAGTC	2 cut(s)	107, 1779
PmaCI	CACGTG	1 cut(s)	1367
PmlI	CACGTG	1 cut(s)	1367
PpsI	GAGTC	2 cut(s)	107, 1779
Ppu21I	YACGTR	3 cut(s)	745, 947, 1367
PscI	ACATGT	1 cut(s)	2196
PshBI	ATTAAT	1 cut(s)	1203
Psp6I	CCWGG	5 cut(s)	689, 1342, 1494, 2144, 2278
PspCI	CACGTG	1 cut(s)	1367
PspGI	CCWGG	5 cut(s)	689, 1342, 1494, 2144, 2278
PspN4I	GGNNCC	4 cut(s)	247, 1931, 2008, 2356
PspPI	GGNCC	4 cut(s)	296, 653, 1094, 2042
PstNI	CAGNNNCTG	2 cut(s)	161, 2331
PsuI	RGATCY	2 cut(s)	245, 2244
PvuII	CAGCTG	1 cut(s)	1066
RsaI	GTAC	5 cut(s)	354, 1542, 1618, 1931, 2417
RsaNI	GTAC	5 cut(s)	353, 1541, 1617, 1930, 2416
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	8 cut(s)	168, 929, 1077, 1158, 1203, 1284, 1656, 1679
SatI	GCNGC	6 cut(s)	153, 372, 450, 1300, 1500, 1662
Sau3AI	GATC	9 cut(s)	245, 324, 379, 679, 1315, 1467, 2244, 2290, 2322
Sau96I	GGNCC	4 cut(s)	296, 653, 1094, 2042
SchI	GAGTC	2 cut(s)	107, 1780
ScrFI	CCNGG	5 cut(s)	691, 1344, 1496, 2146, 2280
SduI	GDGCHC	1 cut(s)	2032
SfaNI	GCATC	1 cut(s)	946
SfuI	TTCGAA	1 cut(s)	2239
SinI	GGWCC	2 cut(s)	296, 1094
SmlI	CTYRAG	3 cut(s)	554, 2104, 2559
SmoI	CTYRAG	3 cut(s)	554, 2104, 2559
SsiI	CCGC	3 cut(s)	449, 1783, 2151
SspI	AATATT	2 cut(s)	1083, 1207
SspMI	CTAG	6 cut(s)	885, 1040, 1443, 1911, 1983, 2003
StyD4I	CCNGG	5 cut(s)	689, 1342, 1494, 2144, 2278
StyI	CCWWGG	1 cut(s)	453
TaiI	ACGT	5 cut(s)	669, 747, 949, 1369, 1829
TaqI	TCGA	5 cut(s)	802, 865, 1153, 1470, 2239
TatI	WGTACW	1 cut(s)	1616
TauI	GCSGC	1 cut(s)	452
TfiI	GAWTC	5 cut(s)	176, 699, 782, 799, 2177
Tru1I	TTAA	8 cut(s)	168, 929, 1077, 1158, 1203, 1284, 1656, 1679
Tru9I	TTAA	8 cut(s)	168, 929, 1077, 1158, 1203, 1284, 1656, 1679
TseFI	GTSAC	3 cut(s)	737, 1878, 2282
TseI	GCWGC	5 cut(s)	152, 371, 1299, 1499, 1661
Tsp45I	GTSAC	3 cut(s)	737, 1878, 2282
TspGWI	ACGGA	2 cut(s)	1506, 2129
Van91I	CCANNNNNTGG	1 cut(s)	2051
VpaK11BI	GGWCC	2 cut(s)	296, 1094
VspI	ATTAAT	1 cut(s)	1203
XapI	RAATTY	3 cut(s)	919, 1059, 1436
XceI	RCATGY	1 cut(s)	2200
XmiI	GTMKAC	1 cut(s)	663
XmnI	GAANNNNTTC	2 cut(s)	258, 2097
XspI	CTAG	6 cut(s)	885, 1040, 1443, 1911, 1983, 2003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.