Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006374

Physical Location & Seq

Genomic Coordinates Forward (+)

79555316 .. 79561316

Gene Structure 6001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG565900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

ATGGGATATAGTGTGGTTTTGGCACTTCATGCTCTCATATGGGTATTGCTCACTGCTTCTTTTTACTGCCAAAAGCCCTCTGTGGTGAACATTGGAGCTATTTTTACTTTTGACTCTGTTATTGGTAGAGTTGCAAAGCCAGCTATGGAAGCAGCAGTTTCTGATGTTAATGCAGATTCAAGAATACTCAGAGGCGCAAAACTGAGGTTGTTTATGGAGAATGCAAATTGTAGCGCGTTCTTGGGATCCATTGAAGCTTTTCAGGTTCTTGACAAAGGTGTAGTGGCCATAATTGGTCCACAGTCCTCTGCAATAGCTCATATGATCTCTGCGATTGCTAATGGTCTTCAAGTACCTCTTATCTCATATGCTGCCACTGATCCAACACTGTCCGCTCTTCAGTTCCCTTACTTCCTCCGAGCTACAGAGAGTGATGGCTATCAAATGGCGGCCATGGCTGGTTTGATTGATTACTATGGGTGGAAACAGGTAATTGCTGTCTTTGTGGATGATGAATATGGGAGGAATGGAATATCTGCTTTAGGTGATGAACTTGAGAAAAAAATGACAAAAATTGCATATAAGTTGGCTTTGCCTGTTCAATTCAATCAAAGTTACCTCACTGATTTGCTCAATAAATCCAAATTGCTTGGCCCTCGTGTCTACGTTGTTCACATTGATCCTGACCCCAGGTTGAGAATCTTTCAAGTTGCCAAAGAACTTCAAATGATGACCAGTGACTACGTGTGGTTTGCAACAGATTGGCTCTCTACTACCATTGATTCATTCTCTCCAATGAATCGAACTTCGCTCGCTGTTCTTGATGGTGTAGTTGCACTGCGTCAACATACCCCACAGTCCAATCGAAAGAGTGCATTTATGTCTAGGTGGAAAGAAATGCAGAAAGAAGGTTTAGCGAGTTCTGAGTTAAATGTCTATGGACTACGTGCTTATGATGCAGTCTGGACAGTTGCAAAGTCTATTGGAAGATTTATAGATGAACATGAAAATATCTCATTCTCTGTCCTTGACAAATTACTAGAATTGAAACCGTCTGAAATTCAGCTGACAAAGCTTAAAATATTTGATGGTGGACCTCTTCTTAGAGAGAAGTTATTGGAGACAAATATGAGTGGTTTAGCTGGTGAGGTTAGATTTAATCGAGAAGACAGAAACATTGTTAGTGGTGGTTATGATGTCATTAATATTGAGAAGATGGCAATTCATACAGTCGGTTTTTGGTCTAATTATTCAGGGTTTTCAGTTTCACCTCCTGTAACTGTTAAAAGAGGGACAAGCAGCTATCCCCCACTGGATCAGAAGCTTGGCTATGTTACTTGGCCAGGTGGAAATACAGTAACGCCACGTGGTTGGGTGATTGCAGTCGATGAACAACCATTGAGAATTGGAGTGCCAAAAAGAGTGAGTTTTGTTGAATTTGCTAGAGAACTGAACGACAGCCACAAGATCGAAGGATACTGTATTGATGTCTTCATGGCAGCACGAAACTTAGTTCCGTATTATATTCCTTACAGATTTGTACCTTTTGGGAATGGTCAGTCCAATCCCAGTTATGATGAGCTTGTGAAGATGGTTGCACAAAATGTATTTGATGCAGCTGTTGGGGACATTGCAATTGTGAAAAACCGCACAATGATTGTGGATTTTTCTCAGCCCTATGCTACCACTGGGTTAGTGATAGTGGCGCCTGTTTCCAATTCAAAGTCAAATGCTTGGGTCTTTCTTCAACCATTTACTTGGGAGCTGTGGTCTGTCACAGCAGCTTCATTTGTGATTGTTGCAGTGGTTATGTGGACTCTTGAGCATCGAGTGAATGATGATTTTCGAGGTCCCCCTAAGAAGCAGCTTGCTACAATGTTCCTGTTCAGTTTCTCAACACTTTTCAAGAAAAATCAAGAAGATACTGTGAGTCCACTTGGGCGGATAGTGATGGTGGTATGGCTTTTCCTGTTGATGGTAATCACGTCAAGCTATACTGCAAGCTTGACTTCAATCCTTACAGTTCAACAGATTTCATCACCCGTCACTGGAATTGATAGCTTGATCGCAAGCAATTGGCCCATAGGGTACCAAGTAGGGTCATTTGCTTATAGCTATCTGACTGAAAGCCTCTACATTCCTAGTTCAAGACTTGTTCCTCTAGGTTCCCCAGAAGAGTATGAAAGAGCACTACGGCAAGGGCCAGATAATGGAGGGGTGGGAGCTGTGATAGATGAGCTAACTTATATTGAATTGTTTCTCTCAAGGCTAACGGACTTTGGGATTATTGGGCAAACATTTACCAGGAGCGGATGGGGATTTGCTTTTCAAAAAGATTCTCCCTTAGCTGTTGACATGTCGACTGCAATCTTGAAACTTTCTGAGAATGGAGAGCTTCGGAAGATCCACGAGAAATGGTTTTGTAAGATGGGTTGTCCTAGTGATAAGGATCAGGACACTGAGCCTAACCAACTCAACTTGATCAGCTTCTGGGGTTTATATCTATTATGTGGTGCCTTCTCTGTCGTTGCATTTGTAGTGTTTCTGATAAGAATGATTTACCAATTTGTCCGGTACAAAAAACGGCAAGTAAATCATCCTTCTCCTGTATCCACAAGCTCATCCAATACTCACTGTTCTCAGGTCATATCCAACTTTGTTGATTTCGTTGATGAAAAGGAAGAAGCTATCAAGAGAATGTTTCAGCATGATAATCCTCAAGTTCAGGTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009506 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030054 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

911

Amino Acids

101.73

Weight (kDa)

6.36

Isoelectric Point (pI)

37.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	29 - 327	8.5e-15	Periplasmic binding protein
ANF_receptor	PF01094	45 - 404	3.1e-81	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	481 - 570	1.7e-10	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	488 - 807	3.1e-11	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	586 - 838	5.6e-35	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32400
fragaria_vesca	FvH4_6g43290 FvH4_6g43290 FvH4_6g43290 FvH4_6g43290
malus_domestica	MD09G1070000.v1.1 MD09G1108300.v1.1 MD17G1096200.v1.1
prunus_persica	Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1
pyrus_communis	pycom09g03020 pycom09g03080 pycom17g09230
rosa_chinensis	RchiOBHm_Chr2g0159561
rosa_laevigata	RLG00000021166
rosa_multiflora	Rmu_sc0012414.1_g000014 Rmu_sc0012414.1_g000015
rosa_roxburghii	Rroxscaffold_2G00090400
rosa_rugosa	Rorug02G0476900 Rorug02G0476900
rosa_samantha	Rh2AG543800 Rh2AG544100 Rh2BG556900 Rh2CG527100 Rh2DG565900
rosa_wichuraiana	Rw2G044980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2088
AccB1I	GGYRCC	3 cut(s)	1705, 2088, 2513
AccB7I	CCANNNNNTGG	1 cut(s)	2210
AccBSI	CCGCTC	2 cut(s)	395, 2310
AccI	GTMKAC	2 cut(s)	663, 2360
AccII	CGCG	1 cut(s)	236
AciI	CCGC	5 cut(s)	393, 449, 1648, 1942, 2310
AclWI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2398, 2457
AcoI	YGGCCR	3 cut(s)	285, 450, 1340
AcsI	RAATTY	2 cut(s)	1059, 1436
AcuI	CTGAAG	1 cut(s)	383
AcvI	CACGTG	1 cut(s)	1367
AcyI	GRCGYC	1 cut(s)	1706
AfaI	GTAC	4 cut(s)	354, 1542, 2090, 2576
AfiI	CCNNNNNNNGG	3 cut(s)	1975, 2048, 2210
AflIII	ACRYGT	2 cut(s)	744, 2355
AjiI	CACGTC	1 cut(s)	1986
AjnI	CCWGG	3 cut(s)	689, 1342, 2303
Alw21I	GWGCWC	1 cut(s)	2191
Alw26I	GTCTC	1 cut(s)	1115
AlwI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2398, 2457
AlwNI	CAGNNNCTG	2 cut(s)	161, 2490
AoxI	GGCC	6 cut(s)	285, 450, 652, 1340, 2078, 2201
ApeKI	GCWGC	7 cut(s)	152, 371, 1299, 1499, 1616, 1781, 1864
ApoI	RAATTY	2 cut(s)	1059, 1436
AseI	ATTAAT	1 cut(s)	1203
Asp700I	GAANNNNTTC	2 cut(s)	258, 2256
Asp718I	GGTACC	1 cut(s)	2088
AspLEI	GCGC	3 cut(s)	197, 236, 1708
AspS9I	GGNCC	6 cut(s)	296, 653, 1094, 1850, 2079, 2201
AsuHPI	GGTGA	6 cut(s)	97, 557, 1157, 1260, 1387, 2031
AvaII	GGWCC	3 cut(s)	296, 1094, 1850
BalI	TGGCCA	2 cut(s)	287, 1342
BamHI	GGATCC	1 cut(s)	245
BanI	GGYRCC	3 cut(s)	1705, 2088, 2513
BauI	CACGAG	2 cut(s)	657, 2408
BbrPI	CACGTG	1 cut(s)	1367
BbsI	GAAGAC	3 cut(s)	338, 1173, 1483
Bbv12I	GWGCWC	1 cut(s)	2191
BbvI	GCAGC	7 cut(s)	164, 358, 1311, 1511, 1628, 1793, 1876
BccI	CCATC	9 cut(s)	428, 818, 1082, 1210, 1585, 1945, 1969, 2307, 2422
BceAI	ACGGC	2 cut(s)	2210, 2600
BciT130I	CCWGG	3 cut(s)	691, 1344, 2305
BciVI	GTATCC	2 cut(s)	1469, 2620
BclI	TGATCA	1 cut(s)	2481
BcoDI	GTCTC	1 cut(s)	1115
BfaI	CTAG	6 cut(s)	885, 1040, 1443, 2142, 2162, 2439
BfmI	CTRYAG	1 cut(s)	423
BfoI	RGCGCY	1 cut(s)	1709
BfuI	GTATCC	2 cut(s)	1469, 2620
BisI	GCNGC	8 cut(s)	153, 372, 450, 1300, 1500, 1617, 1782, 1865
BlsI	GCNGC	8 cut(s)	154, 373, 451, 1301, 1501, 1618, 1783, 1866
Bme1390I	CCNGG	3 cut(s)	691, 1344, 2305
Bme18I	GGWCC	3 cut(s)	296, 1094, 1850
BmgBI	CACGTC	1 cut(s)	1986
BmgT120I	GGNCC	6 cut(s)	296, 653, 1094, 1850, 2079, 2201
BmiI	GGNNCC	6 cut(s)	247, 1707, 1852, 2090, 2167, 2515
BmrFI	CCNGG	3 cut(s)	691, 1344, 2305
BmrI	ACTGGG	2 cut(s)	1563, 1698
BmsI	GCATC	3 cut(s)	946, 1603, 1834
BmuI	ACTGGG	2 cut(s)	1563, 1698
BpiI	GAAGAC	3 cut(s)	338, 1173, 1483
Bpu10I	CCTNAGC	1 cut(s)	2344
BpuEI	CTTGAG	4 cut(s)	575, 1841, 2248, 2703
BsaAI	YACGTR	3 cut(s)	745, 947, 1367
BsaBI	GATNNNNATC	3 cut(s)	438, 1979, 2448
BsaHI	GRCGYC	1 cut(s)	1706
BsaJI	CCNNGG	2 cut(s)	453, 689
BsaWI	WCCGGW	1 cut(s)	2571
BsaXI	ACNNNNNCTCC	2 cut(s)	1754, 1784
Bsc4I	CCNNNNNNNGG	3 cut(s)	1975, 2048, 2210
Bse1I	ACTGG	5 cut(s)	735, 1317, 1569, 1693, 2053
Bse3DI	GCAATG	1 cut(s)	1629
Bse8I	GATNNNNATC	3 cut(s)	438, 1979, 2448
BseBI	CCWGG	3 cut(s)	691, 1344, 2305
BseDI	CCNNGG	2 cut(s)	453, 689
BseGI	GGATG	4 cut(s)	514, 2318, 2596, 2621
BseJI	GATNNNNATC	3 cut(s)	438, 1979, 2448
BseLI	CCNNNNNNNGG	3 cut(s)	1975, 2048, 2210
BseMI	GCAATG	1 cut(s)	1629
BseMII	CTCAG	7 cut(s)	194, 202, 915, 1685, 2373, 2451, 2654
BseNI	ACTGG	5 cut(s)	735, 1317, 1569, 1693, 2053
BseXI	GCAGC	7 cut(s)	164, 358, 1311, 1511, 1628, 1793, 1876
Bsh1236I	CGCG	1 cut(s)	236
BshFI	GGCC	6 cut(s)	287, 452, 654, 1342, 2080, 2203
BshNI	GGYRCC	3 cut(s)	1705, 2088, 2513
BsiHKAI	GWGCWC	1 cut(s)	2191
BsiSI	CCGG	1 cut(s)	2572
BslFI	GGGAC	3 cut(s)	1306, 1640, 1836
BslI	CCNNNNNNNGG	3 cut(s)	1975, 2048, 2210
BsmAI	GTCTC	1 cut(s)	1115
BsmFI	GGGAC	3 cut(s)	1306, 1640, 1836
BsmI	GAATGC	1 cut(s)	226
BsnI	GGCC	6 cut(s)	287, 452, 654, 1342, 2080, 2203
Bsp1286I	GDGCHC	1 cut(s)	2191
Bsp19I	CCATGG	1 cut(s)	453
BspACI	CCGC	5 cut(s)	393, 449, 1648, 1942, 2310
BspANI	GGCC	6 cut(s)	287, 452, 654, 1342, 2080, 2203
BspCNI	CTCAG	7 cut(s)	195, 201, 916, 1684, 2374, 2452, 2653
BspFNI	CGCG	1 cut(s)	236
BspLI	GGNNCC	6 cut(s)	247, 1707, 1852, 2090, 2167, 2515
BspPI	GGATC	7 cut(s)	240, 253, 374, 674, 1323, 2398, 2457
BspQI	GCTCTTC	1 cut(s)	402
BspT107I	GGYRCC	3 cut(s)	1705, 2088, 2513
BsrBI	CCGCTC	2 cut(s)	395, 2310
BsrDI	GCAATG	1 cut(s)	1629
BsrI	ACTGG	5 cut(s)	735, 1317, 1569, 1693, 2053
BssECI	CCNNGG	2 cut(s)	453, 689
BssNI	GRCGYC	1 cut(s)	1706
BssSI	CACGAG	2 cut(s)	657, 2408
BssT1I	CCWWGG	1 cut(s)	453
Bst2BI	CACGAG	2 cut(s)	657, 2408
Bst2UI	CCWGG	3 cut(s)	691, 1344, 2305
Bst6I	CTCTTC	3 cut(s)	402, 1104, 2169
BstACI	GRCGYC	1 cut(s)	1706
BstAPI	GCANNNNNTGC	1 cut(s)	29
BstBAI	YACGTR	3 cut(s)	745, 947, 1367
BstC8I	GCNNGC	5 cut(s)	141, 813, 1869, 2002, 2071
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	4 cut(s)	514, 2318, 2596, 2621
BstFNI	CGCG	1 cut(s)	236
BstH2I	RGCGCY	1 cut(s)	1709
BstHHI	GCGC	3 cut(s)	197, 236, 1708
BstMAI	GTCTC	1 cut(s)	1115
BstMWI	GCNNNNNNNGC	6 cut(s)	29, 140, 149, 455, 956, 1072
BstNI	CCWGG	3 cut(s)	691, 1344, 2305
BstNSI	RCATGY	1 cut(s)	2359
BstSCI	CCNGG	3 cut(s)	689, 1342, 2303
BstSFI	CTRYAG	1 cut(s)	423
BstUI	CGCG	1 cut(s)	236
BstV1I	GCAGC	7 cut(s)	164, 358, 1311, 1511, 1628, 1793, 1876
BstV2I	GAAGAC	3 cut(s)	338, 1173, 1483
BstX2I	RGATCY	2 cut(s)	245, 2403
BstXI	CCANNNNNNTGG	2 cut(s)	1371, 1758
BstYI	RGATCY	2 cut(s)	245, 2403
BsuI	GTATCC	2 cut(s)	1469, 2620
BsuRI	GGCC	6 cut(s)	287, 452, 654, 1342, 2080, 2203
BtgI	CCRYGG	1 cut(s)	453
BtrI	CACGTC	1 cut(s)	1986
BtsCI	GGATG	4 cut(s)	514, 2318, 2596, 2621
BtsI	GCAGTG	3 cut(s)	51, 836, 1809
Cac8I	GCNNGC	5 cut(s)	141, 813, 1869, 2002, 2071
CaiI	CAGNNNCTG	2 cut(s)	161, 2490
CfoI	GCGC	3 cut(s)	197, 236, 1708
Cfr13I	GGNCC	6 cut(s)	296, 653, 1094, 1850, 2079, 2201
CseI	GACGC	1 cut(s)	830
Csp6I	GTAC	4 cut(s)	353, 1541, 2089, 2575
CspCI	CAANNNNNGTGG	2 cut(s)	1641, 1676
CviAII	CATG	6 cut(s)	29, 454, 1004, 1495, 2356, 2708
CviQI	GTAC	4 cut(s)	353, 1541, 2089, 2575
DinI	GGCGCC	1 cut(s)	1707
EaeI	YGGCCR	3 cut(s)	285, 450, 1340
Eam1104I	CTCTTC	3 cut(s)	402, 1104, 2169
EarI	CTCTTC	3 cut(s)	402, 1104, 2169
EciI	GGCGGA	1 cut(s)	1957
Eco130I	CCWWGG	1 cut(s)	453
Eco47I	GGWCC	3 cut(s)	296, 1094, 1850
Eco57I	CTGAAG	1 cut(s)	383
Eco72I	CACGTG	1 cut(s)	1367
EcoO109I	RGGNCCY	1 cut(s)	1850
EcoRII	CCWGG	3 cut(s)	689, 1342, 2303
EcoT14I	CCWWGG	1 cut(s)	453
EgeI	GGCGCC	1 cut(s)	1707
EheI	GGCGCC	1 cut(s)	1707
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	6 cut(s)	32, 457, 1007, 1498, 2359, 2711
FalI	AAGNNNNNCTT	4 cut(s)	342, 374, 1993, 2025
FaqI	GGGAC	3 cut(s)	1306, 1640, 1836
FatI	CATG	6 cut(s)	28, 453, 1003, 1494, 2355, 2707
FauNDI	CATATG	3 cut(s)	38, 321, 367
FbaI	TGATCA	1 cut(s)	2481
FblI	GTMKAC	2 cut(s)	663, 2360
Fnu4HI	GCNGC	8 cut(s)	153, 372, 450, 1300, 1500, 1617, 1782, 1865
FokI	GGATG	4 cut(s)	521, 2325, 2583, 2608
Fsp4HI	GCNGC	8 cut(s)	153, 372, 450, 1300, 1500, 1617, 1782, 1865
FspBI	CTAG	6 cut(s)	885, 1040, 1443, 2142, 2162, 2439
GlaI	GCGC	3 cut(s)	196, 235, 1707
GluI	GCNGC	8 cut(s)	153, 372, 450, 1300, 1500, 1617, 1782, 1865
HaeII	RGCGCY	1 cut(s)	1709
HaeIII	GGCC	6 cut(s)	287, 452, 654, 1342, 2080, 2203
HapII	CCGG	1 cut(s)	2572
HgaI	GACGC	1 cut(s)	830
HhaI	GCGC	3 cut(s)	197, 236, 1708
Hin1I	GRCGYC	1 cut(s)	1706
Hin1II	CATG	6 cut(s)	32, 457, 1007, 1498, 2359, 2711
Hin6I	GCGC	3 cut(s)	195, 234, 1706
HinP1I	GCGC	3 cut(s)	195, 234, 1706
HincII	GTYRAC	3 cut(s)	845, 2353, 2361
HindII	GTYRAC	3 cut(s)	845, 2353, 2361
HindIII	AAGCTT	4 cut(s)	255, 1073, 1322, 2002
HinfI	GANTC	8 cut(s)	113, 176, 699, 782, 799, 1816, 1930, 2336
HpaII	CCGG	1 cut(s)	2572
HphI	GGTGA	6 cut(s)	97, 557, 1157, 1260, 1387, 2031
HpyAV	CCTTC	4 cut(s)	902, 1466, 2527, 2610
HpyCH4IV	ACGT	5 cut(s)	666, 744, 946, 1366, 1985
HpyF10VI	GCNNNNNNNGC	6 cut(s)	29, 140, 149, 455, 956, 1072
HpySE526I	ACGT	5 cut(s)	666, 744, 946, 1366, 1985
Hsp92I	GRCGYC	1 cut(s)	1706
Hsp92II	CATG	6 cut(s)	32, 457, 1007, 1498, 2359, 2711
HspAI	GCGC	3 cut(s)	195, 234, 1706
KasI	GGCGCC	1 cut(s)	1705
KpnI	GGTACC	1 cut(s)	2092
Ksp22I	TGATCA	1 cut(s)	2481
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	4 cut(s)	95, 1762, 2222, 2307
Lsp1109I	GCAGC	7 cut(s)	164, 358, 1311, 1511, 1628, 1793, 1876
LweI	GCATC	3 cut(s)	946, 1603, 1834
MaeI	CTAG	6 cut(s)	885, 1040, 1443, 2142, 2162, 2439
MaeII	ACGT	5 cut(s)	666, 744, 946, 1366, 1985
MaeIII	GTNAC	7 cut(s)	614, 737, 1276, 1333, 1357, 1774, 2044
MbiI	CCGCTC	2 cut(s)	395, 2310
MfeI	CAATTG	2 cut(s)	1635, 2074
MflI	RGATCY	2 cut(s)	245, 2403
MhlI	GDGCHC	1 cut(s)	2191
MlsI	TGGCCA	2 cut(s)	287, 1342
MluNI	TGGCCA	2 cut(s)	287, 1342
Mly113I	GGCGCC	1 cut(s)	1706
MlyI	GAGTC	3 cut(s)	107, 1810, 1939
MmeI	TCCRAC	2 cut(s)	407, 2676
Mox20I	TGGCCA	2 cut(s)	287, 1342
MroXI	GAANNNNTTC	2 cut(s)	258, 2256
MscI	TGGCCA	2 cut(s)	287, 1342
MseI	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
Msp20I	TGGCCA	2 cut(s)	287, 1342
MspA1I	CMGCKG	2 cut(s)	1066, 1619
MspI	CCGG	1 cut(s)	2572
MspR9I	CCNGG	3 cut(s)	691, 1344, 2305
MunI	CAATTG	2 cut(s)	1635, 2074
Mva1269I	GAATGC	1 cut(s)	226
MvaI	CCWGG	3 cut(s)	691, 1344, 2305
MvnI	CGCG	1 cut(s)	236
MwoI	GCNNNNNNNGC	6 cut(s)	29, 140, 149, 455, 956, 1072
NarI	GGCGCC	1 cut(s)	1706
NcoI	CCATGG	1 cut(s)	453
NdeI	CATATG	3 cut(s)	38, 321, 367
NlaIII	CATG	6 cut(s)	32, 457, 1007, 1498, 2359, 2711
NlaIV	GGNNCC	6 cut(s)	247, 1707, 1852, 2090, 2167, 2515
NmuCI	GTSAC	3 cut(s)	737, 1774, 2044
NspI	RCATGY	1 cut(s)	2359
PciI	ACATGT	1 cut(s)	2355
PciSI	GCTCTTC	1 cut(s)	402
PctI	GAATGC	1 cut(s)	226
PdmI	GAANNNNTTC	2 cut(s)	258, 2256
PfeI	GAWTC	5 cut(s)	176, 699, 782, 799, 2336
PflMI	CCANNNNNTGG	1 cut(s)	2210
PkrI	GCNGC	8 cut(s)	154, 373, 451, 1301, 1501, 1618, 1783, 1866
PleI	GAGTC	3 cut(s)	107, 1810, 1938
PluTI	GGCGCC	1 cut(s)	1709
PmaCI	CACGTG	1 cut(s)	1367
PmlI	CACGTG	1 cut(s)	1367
PpsI	GAGTC	3 cut(s)	107, 1810, 1938
Ppu21I	YACGTR	3 cut(s)	745, 947, 1367
PpuMI	RGGWCCY	1 cut(s)	1850
PscI	ACATGT	1 cut(s)	2355
PshBI	ATTAAT	1 cut(s)	1203
Psp5II	RGGWCCY	1 cut(s)	1850
Psp6I	CCWGG	3 cut(s)	689, 1342, 2303
PspCI	CACGTG	1 cut(s)	1367
PspGI	CCWGG	3 cut(s)	689, 1342, 2303
PspN4I	GGNNCC	6 cut(s)	247, 1707, 1852, 2090, 2167, 2515
PspPI	GGNCC	6 cut(s)	296, 653, 1094, 1850, 2079, 2201
PspPPI	RGGWCCY	1 cut(s)	1850
PstNI	CAGNNNCTG	2 cut(s)	161, 2490
PsuI	RGATCY	2 cut(s)	245, 2403
PvuII	CAGCTG	2 cut(s)	1066, 1619
RsaI	GTAC	4 cut(s)	354, 1542, 2090, 2576
RsaNI	GTAC	4 cut(s)	353, 1541, 2089, 2575
SalI	GTCGAC	1 cut(s)	2359
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
SatI	GCNGC	8 cut(s)	153, 372, 450, 1300, 1500, 1617, 1782, 1865
Sau96I	GGNCC	6 cut(s)	296, 653, 1094, 1850, 2079, 2201
SchI	GAGTC	3 cut(s)	107, 1810, 1939
ScrFI	CCNGG	3 cut(s)	691, 1344, 2305
SduI	GDGCHC	1 cut(s)	2191
SfaNI	GCATC	3 cut(s)	946, 1603, 1834
SfcI	CTRYAG	1 cut(s)	423
SfoI	GGCGCC	1 cut(s)	1707
SinI	GGWCC	3 cut(s)	296, 1094, 1850
SmlI	CTYRAG	4 cut(s)	554, 1820, 2263, 2718
SmoI	CTYRAG	4 cut(s)	554, 1820, 2263, 2718
SsiI	CCGC	5 cut(s)	393, 449, 1648, 1942, 2310
SspDI	GGCGCC	1 cut(s)	1705
SspI	AATATT	2 cut(s)	1083, 1207
SspMI	CTAG	6 cut(s)	885, 1040, 1443, 2142, 2162, 2439
StyD4I	CCNGG	3 cut(s)	689, 1342, 2303
StyI	CCWWGG	1 cut(s)	453
TaiI	ACGT	5 cut(s)	669, 747, 949, 1369, 1988
TaqI	TCGA	8 cut(s)	802, 865, 1162, 1386, 1470, 1828, 1846, 2360
TauI	GCSGC	1 cut(s)	452
TfiI	GAWTC	5 cut(s)	176, 699, 782, 799, 2336
Tru1I	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
Tru9I	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
TseFI	GTSAC	3 cut(s)	737, 1774, 2044
TseI	GCWGC	7 cut(s)	152, 371, 1299, 1499, 1616, 1781, 1864
Tsp45I	GTSAC	3 cut(s)	737, 1774, 2044
TspGWI	ACGGA	2 cut(s)	1506, 2288
Van91I	CCANNNNNTGG	1 cut(s)	2210
VpaK11BI	GGWCC	3 cut(s)	296, 1094, 1850
VspI	ATTAAT	1 cut(s)	1203
XapI	RAATTY	2 cut(s)	1059, 1436
XceI	RCATGY	1 cut(s)	2359
XmiI	GTMKAC	2 cut(s)	663, 2360
XmnI	GAANNNNTTC	2 cut(s)	258, 2256
XspI	CTAG	6 cut(s)	885, 1040, 1443, 2142, 2162, 2439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.