Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006374

Physical Location & Seq

Genomic Coordinates Reverse (-)

12148218 .. 12154084

Gene Structure 5867 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00090400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGAGATATAGTGTGGTTTTGGCACTTCATACTCTCATATGGGTATTGCTCACTGCTTCTTTTTACTGCCAAAAGCCTTCTGTGGTGAACATTGGAGCTATTTTTACTTTTGACTCTGTTATTGGTAGAGTTGCAAAGCCAGCTATGGAAGCAGCAGTTTCTGATGTTAATGCAGATTCAAGAATACTCAGAGGCGCAAAACTGGAGTTGTTTATGGAAAATGCAAATTGTAGCGCGTTCTTGGGATCCATTGAAGCTTTTCAGGTTCTTGACAAAGGTGTGGTGGCCATAATTGGTCCACAGTCCTCTGCAATAGCTCATATGATCTCTGCGATTGCTAATGGTCTTCAAGTACCTCTTATCTCATATGCTGCCACTGATCCAACACTGTCTGCTCTTCAGTTCCCTTACTTCCTCCGAGCTACACAAAGTGATGGCTATCAAATGGCGGCCATGGCTGGTTTGATTGATTACTATGGGTGGAAACAGGTAATTGCTGTCTTTGTGGATGACGAATATGGGAGGAATGGAATATCTGCTTTAGGTGATGAACTTGAGAGAAAAATGACAAAAATTGCATATAAGTTGGCTTTGCCTGTTCAATTCAATCAAAGTTACCTCACTGATTTGCTCAATAAATCCAAATTGCTTGGCCCTCGTGTCTACGTTGTTCACATTGATCCTGACCCCAGGTTGAGAATCTTTCAAGTTGCCAAAGAACTACAAATGATGACCAGTGACTACGTGTGGTTTGCAACAGATTGGCTCTCTACTACCATTGATTCATTCTCTCCAATGAATCGAACTTCGCTCGCTGTTCTTGATGGTGTAGTTGCACTGCGTCAACATACCCCACAGTCCAATCGAAAGAGTGCATTTATGTCTAGGTGGAAAGAAATGCAGAAAGAAGGTTTAGCGAGTTCTGAGTTAAATGTCTACGGACTACGTGCTTATGATGCAGTCTGGACAGTTGCAAAGTCTATTGGAAGATTTATAGATGAACATGAAAATATCTCATTCTCTGTCCTTGACAAATTACTAGAATTGAAACCGTCTGAAATTCAGCTGACGAAGCTTAAAATATTTGATGGTGGACCTCTTCTTAGAAAGAAGTTATTGGAGACAAATATGAGTGGTTTAGCTGGTGAGGTTCGATTTAATCAAGAAGACAGAAGCATTGTTAGTGGTGGCTATGATGTCATTAATATTGAGAAGATGGCAATTCATACAGTCGGTTTTTGGTCTAATTATTCAGGGTTTTCAGTTTCACCTCCTGTAACTGTTAAAAGAGGGACAAGCAGCTATTCCCCACTGGATCAGAAGCTTGGCTATGTTACTTGGCCAGGTGGAAATACAGTAACGCCACGTGGTTGGGTGATTGCAGACAATGAACAACCATTGAGAATTGGAGTGCCAAAAAGAGCGACACGAAAGTTAGTTCCGTATGATATTCCTTACAGATTTGTACCTTTTGGGAATGGTCAGTCCAATCCCAGTTATGATGAGCTTGTGAAGATGGTTGCACAAAATGTATTTGATGCAGCTGTCGGGGACATTGCAATTGTGAAAAACCGCACAATGATTGTGGATTTTTCTCAGCCCTATGCTACCACTGGGTTCAGTTTCTCAACACTTTTCAAGAAAAATCAAGAAGATACTGTGAGTCCACTTGGGCGGATAGTGATGGTGGTATGGCTTTTCCTGTTGATGGTAATCACGTCAAGCTATACTGCAAGCTTGACTTCAATCCTTACAGTTCAGCAGATTTCATCACCCGTCACTGGAATTGATAGCTTGATCGCAAGCAATTGGCCCATAGGGTACCAAGTAGGGTCATTTGCTTATAGCTATCTGACTGAAAGCCTCTACATTCCTGGTTCAAGACTTGTTCCTCTAGGTTCCCCAGAAGAGTATGAAAGAGCACTACGGCAAGGGCCAGATAATGGAGGGGTGGGAGCTGTGATAGATGAGCTAACTTATATTGAATTGTTTCTCTCAAGGCTAACGGACTTTGGGATTATTGGGCAAACATTTACCAGGAGCGGATGGGGATTTGCTTTTCAAAAAGATTCTCCCTTAGCTGTTGACATGTCGACTGCAATCTTGAAACTTTCTGAGAATGGAGAGCTTCGGAAGATCTATGAGAAATGGTTTTGTAAGATGGGTTGTCCTGGTGATAAGGAACAGTACACTGAGCCTAACCAACTCCACTTGATCAGCTTCTGGGGTTTATATCTATTATGTGGTGCCTTCTCTGTTGTTGCATTTGTAGTGTTTCTGATAAGAATGATTTACCAATTTGTCCGGTACAAAAAACAGCAAGTAAATCATCCTTCTCCTGTATCCACAAGCTCATCCAGTATTCAATGTTCTCAGGTCATATCTAACTTTGTTGATTTCATTGATGAAAAGGAAGAAGCTATCAAGAGAATGTTTCAGCATGATAATCCTCAAGTTCAGGTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009506 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030054 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

822

Amino Acids

91.61

Weight (kDa)

6.78

Isoelectric Point (pI)

37.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	29 - 327	6.1e-15	Periplasmic binding protein
ANF_receptor	PF01094	45 - 404	5.7e-82	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	491 - 548	4.3e-06	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	499 - 718	2.1e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	535 - 749	3.9e-22	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32400
fragaria_vesca	FvH4_6g43290 FvH4_6g43290 FvH4_6g43290 FvH4_6g43290
malus_domestica	MD09G1070000.v1.1 MD09G1108300.v1.1 MD17G1096200.v1.1
prunus_persica	Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1 Prupe.3G217800_v2.0.a1
pyrus_communis	pycom09g03020 pycom09g03080 pycom17g09230
rosa_chinensis	RchiOBHm_Chr2g0159561
rosa_laevigata	RLG00000021166
rosa_multiflora	Rmu_sc0012414.1_g000014 Rmu_sc0012414.1_g000015
rosa_roxburghii	Rroxscaffold_2G00090400
rosa_rugosa	Rorug02G0476900 Rorug02G0476900
rosa_samantha	Rh2AG543800 Rh2AG544100 Rh2BG556900 Rh2CG527100 Rh2DG565900
rosa_wichuraiana	Rw2G044980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1821
AccB1I	GGYRCC	2 cut(s)	1821, 2246
AccB7I	CCANNNNNTGG	1 cut(s)	1943
AccBSI	CCGCTC	1 cut(s)	2043
AccI	GTMKAC	3 cut(s)	663, 936, 2093
AccII	CGCG	1 cut(s)	236
AciI	CCGC	4 cut(s)	449, 1573, 1675, 2043
AclWI	GGATC	5 cut(s)	240, 253, 374, 674, 1323
AcoI	YGGCCR	3 cut(s)	285, 450, 1340
AcsI	RAATTY	1 cut(s)	1059
AcuI	CTGAAG	1 cut(s)	383
AcvI	CACGTG	1 cut(s)	1367
AdeI	CACNNNGTG	1 cut(s)	431
AfaI	GTAC	5 cut(s)	354, 1467, 1823, 2189, 2309
AfiI	CCNNNNNNNGG	3 cut(s)	1708, 1781, 1943
AflIII	ACRYGT	2 cut(s)	744, 2088
AjiI	CACGTC	1 cut(s)	1719
AjnI	CCWGG	5 cut(s)	689, 1342, 1873, 2036, 2170
Alw21I	GWGCWC	1 cut(s)	1924
Alw26I	GTCTC	1 cut(s)	1115
AlwI	GGATC	5 cut(s)	240, 253, 374, 674, 1323
AlwNI	CAGNNNCTG	2 cut(s)	161, 2223
AoxI	GGCC	6 cut(s)	285, 450, 652, 1340, 1811, 1934
ApeKI	GCWGC	4 cut(s)	152, 371, 1299, 1541
ApoI	RAATTY	1 cut(s)	1059
AseI	ATTAAT	1 cut(s)	1203
Asp700I	GAANNNNTTC	2 cut(s)	258, 1989
Asp718I	GGTACC	1 cut(s)	1821
AspLEI	GCGC	2 cut(s)	197, 236
AspS9I	GGNCC	5 cut(s)	296, 653, 1094, 1812, 1934
AsuHPI	GGTGA	7 cut(s)	97, 557, 1157, 1260, 1387, 1764, 2186
AvaII	GGWCC	2 cut(s)	296, 1094
BalI	TGGCCA	2 cut(s)	287, 1342
BamHI	GGATCC	1 cut(s)	245
BanI	GGYRCC	2 cut(s)	1821, 2246
BauI	CACGAG	1 cut(s)	657
BbrPI	CACGTG	1 cut(s)	1367
BbsI	GAAGAC	2 cut(s)	338, 1173
Bbv12I	GWGCWC	1 cut(s)	1924
BbvI	GCAGC	4 cut(s)	164, 358, 1311, 1553
BccI	CCATC	9 cut(s)	428, 818, 1082, 1210, 1510, 1678, 1702, 2040, 2155
BceAI	ACGGC	1 cut(s)	1943
BciT130I	CCWGG	5 cut(s)	691, 1344, 1875, 2038, 2172
BciVI	GTATCC	1 cut(s)	2353
BclI	TGATCA	1 cut(s)	2214
BcoDI	GTCTC	1 cut(s)	1115
BfaI	CTAG	3 cut(s)	885, 1040, 1895
BfuI	GTATCC	1 cut(s)	2353
BglII	AGATCT	1 cut(s)	2136
BisI	GCNGC	5 cut(s)	153, 372, 450, 1300, 1542
BlsI	GCNGC	5 cut(s)	154, 373, 451, 1301, 1543
Bme1390I	CCNGG	5 cut(s)	691, 1344, 1875, 2038, 2172
Bme18I	GGWCC	2 cut(s)	296, 1094
BmgBI	CACGTC	1 cut(s)	1719
BmgT120I	GGNCC	5 cut(s)	296, 653, 1094, 1812, 1934
BmiI	GGNNCC	4 cut(s)	247, 1823, 1900, 2248
BmrFI	CCNGG	5 cut(s)	691, 1344, 1875, 2038, 2172
BmrI	ACTGGG	2 cut(s)	1488, 1623
BmsI	GCATC	2 cut(s)	946, 1528
BmuI	ACTGGG	2 cut(s)	1488, 1623
BpiI	GAAGAC	2 cut(s)	338, 1173
BpmI	CTGGAG	1 cut(s)	224
Bpu10I	CCTNAGC	1 cut(s)	2077
BpuEI	CTTGAG	3 cut(s)	575, 1981, 2436
BsaAI	YACGTR	3 cut(s)	745, 947, 1367
BsaBI	GATNNNNATC	2 cut(s)	438, 1712
BsaJI	CCNNGG	2 cut(s)	453, 689
BsaWI	WCCGGW	1 cut(s)	2304
Bsc4I	CCNNNNNNNGG	3 cut(s)	1708, 1781, 1943
Bse1I	ACTGG	7 cut(s)	207, 735, 1317, 1494, 1618, 1786, 2358
Bse3DI	GCAATG	1 cut(s)	1554
Bse8I	GATNNNNATC	2 cut(s)	438, 1712
BseBI	CCWGG	5 cut(s)	691, 1344, 1875, 2038, 2172
BseDI	CCNNGG	2 cut(s)	453, 689
BseGI	GGATG	4 cut(s)	514, 2051, 2329, 2354
BseJI	GATNNNNATC	2 cut(s)	438, 1712
BseLI	CCNNNNNNNGG	3 cut(s)	1708, 1781, 1943
BseMI	GCAATG	1 cut(s)	1554
BseMII	CTCAG	6 cut(s)	202, 915, 1610, 2106, 2184, 2387
BseNI	ACTGG	7 cut(s)	207, 735, 1317, 1494, 1618, 1786, 2358
BseXI	GCAGC	4 cut(s)	164, 358, 1311, 1553
Bsh1236I	CGCG	1 cut(s)	236
BshFI	GGCC	6 cut(s)	287, 452, 654, 1342, 1813, 1936
BshNI	GGYRCC	2 cut(s)	1821, 2246
BsiHKAI	GWGCWC	1 cut(s)	1924
BsiSI	CCGG	1 cut(s)	2305
BslFI	GGGAC	2 cut(s)	1306, 1565
BslI	CCNNNNNNNGG	3 cut(s)	1708, 1781, 1943
BsmAI	GTCTC	1 cut(s)	1115
BsmFI	GGGAC	2 cut(s)	1306, 1565
BsnI	GGCC	6 cut(s)	287, 452, 654, 1342, 1813, 1936
Bsp1286I	GDGCHC	1 cut(s)	1924
Bsp143I	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
Bsp19I	CCATGG	1 cut(s)	453
BspACI	CCGC	4 cut(s)	449, 1573, 1675, 2043
BspANI	GGCC	6 cut(s)	287, 452, 654, 1342, 1813, 1936
BspCNI	CTCAG	6 cut(s)	201, 916, 1609, 2107, 2185, 2386
BspFNI	CGCG	1 cut(s)	236
BspLI	GGNNCC	4 cut(s)	247, 1823, 1900, 2248
BspPI	GGATC	5 cut(s)	240, 253, 374, 674, 1323
BspQI	GCTCTTC	1 cut(s)	402
BspT107I	GGYRCC	2 cut(s)	1821, 2246
BsrBI	CCGCTC	1 cut(s)	2043
BsrDI	GCAATG	1 cut(s)	1554
BsrI	ACTGG	7 cut(s)	207, 735, 1317, 1494, 1618, 1786, 2358
BssECI	CCNNGG	2 cut(s)	453, 689
BssMI	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
BssSI	CACGAG	1 cut(s)	657
BssT1I	CCWWGG	1 cut(s)	453
Bst2BI	CACGAG	1 cut(s)	657
Bst2UI	CCWGG	5 cut(s)	691, 1344, 1875, 2038, 2172
Bst6I	CTCTTC	3 cut(s)	402, 1104, 1902
BstBAI	YACGTR	3 cut(s)	745, 947, 1367
BstC8I	GCNNGC	4 cut(s)	141, 813, 1735, 1804
BstDEI	CTNAG	8 cut(s)	188, 924, 1103, 1596, 2077, 2115, 2193, 2373
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	4 cut(s)	514, 2051, 2329, 2354
BstFNI	CGCG	1 cut(s)	236
BstHHI	GCGC	2 cut(s)	197, 236
BstKTI	GATC	8 cut(s)	248, 327, 382, 682, 1318, 1800, 2139, 2217
BstMAI	GTCTC	1 cut(s)	1115
BstMBI	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
BstMWI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
BstNI	CCWGG	5 cut(s)	691, 1344, 1875, 2038, 2172
BstNSI	RCATGY	1 cut(s)	2092
BstSCI	CCNGG	5 cut(s)	689, 1342, 1873, 2036, 2170
BstUI	CGCG	1 cut(s)	236
BstV1I	GCAGC	4 cut(s)	164, 358, 1311, 1553
BstV2I	GAAGAC	2 cut(s)	338, 1173
BstX2I	RGATCY	2 cut(s)	245, 2136
BstXI	CCANNNNNNTGG	1 cut(s)	1371
BstYI	RGATCY	2 cut(s)	245, 2136
BsuI	GTATCC	1 cut(s)	2353
BsuRI	GGCC	6 cut(s)	287, 452, 654, 1342, 1813, 1936
BtgI	CCRYGG	1 cut(s)	453
BtrI	CACGTC	1 cut(s)	1719
BtsCI	GGATG	4 cut(s)	514, 2051, 2329, 2354
BtsI	GCAGTG	2 cut(s)	51, 836
Cac8I	GCNNGC	4 cut(s)	141, 813, 1735, 1804
CaiI	CAGNNNCTG	2 cut(s)	161, 2223
CfoI	GCGC	2 cut(s)	197, 236
Cfr13I	GGNCC	5 cut(s)	296, 653, 1094, 1812, 1934
CseI	GACGC	1 cut(s)	830
Csp6I	GTAC	5 cut(s)	353, 1466, 1822, 2188, 2308
CspCI	CAANNNNNGTGG	2 cut(s)	1566, 1601
CviAII	CATG	4 cut(s)	454, 1004, 2089, 2441
CviQI	GTAC	5 cut(s)	353, 1466, 1822, 2188, 2308
DdeI	CTNAG	8 cut(s)	188, 924, 1103, 1596, 2077, 2115, 2193, 2373
DpnI	GATC	8 cut(s)	247, 326, 381, 681, 1317, 1799, 2138, 2216
DpnII	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
DraIII	CACNNNGTG	1 cut(s)	431
EaeI	YGGCCR	3 cut(s)	285, 450, 1340
Eam1104I	CTCTTC	3 cut(s)	402, 1104, 1902
EarI	CTCTTC	3 cut(s)	402, 1104, 1902
EciI	GGCGGA	1 cut(s)	1690
Eco130I	CCWWGG	1 cut(s)	453
Eco47I	GGWCC	2 cut(s)	296, 1094
Eco57I	CTGAAG	1 cut(s)	383
Eco72I	CACGTG	1 cut(s)	1367
EcoRII	CCWGG	5 cut(s)	689, 1342, 1873, 2036, 2170
EcoT14I	CCWWGG	1 cut(s)	453
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	4 cut(s)	457, 1007, 2092, 2444
FalI	AAGNNNNNCTT	4 cut(s)	342, 374, 1726, 1758
FaqI	GGGAC	2 cut(s)	1306, 1565
FatI	CATG	4 cut(s)	453, 1003, 2088, 2440
FauNDI	CATATG	3 cut(s)	38, 321, 367
FbaI	TGATCA	1 cut(s)	2214
FblI	GTMKAC	3 cut(s)	663, 936, 2093
Fnu4HI	GCNGC	5 cut(s)	153, 372, 450, 1300, 1542
FokI	GGATG	4 cut(s)	521, 2058, 2316, 2341
Fsp4HI	GCNGC	5 cut(s)	153, 372, 450, 1300, 1542
FspBI	CTAG	3 cut(s)	885, 1040, 1895
GlaI	GCGC	2 cut(s)	196, 235
GluI	GCNGC	5 cut(s)	153, 372, 450, 1300, 1542
GsuI	CTGGAG	1 cut(s)	224
HaeIII	GGCC	6 cut(s)	287, 452, 654, 1342, 1813, 1936
HapII	CCGG	1 cut(s)	2305
HgaI	GACGC	1 cut(s)	830
HhaI	GCGC	2 cut(s)	197, 236
Hin1II	CATG	4 cut(s)	457, 1007, 2092, 2444
Hin6I	GCGC	2 cut(s)	195, 234
HinP1I	GCGC	2 cut(s)	195, 234
HincII	GTYRAC	3 cut(s)	845, 2086, 2094
HindII	GTYRAC	3 cut(s)	845, 2086, 2094
HindIII	AAGCTT	4 cut(s)	255, 1073, 1322, 1735
HinfI	GANTC	7 cut(s)	113, 176, 699, 782, 799, 1663, 2069
HpaII	CCGG	1 cut(s)	2305
HphI	GGTGA	7 cut(s)	97, 557, 1157, 1260, 1387, 1764, 2186
HpyAV	CCTTC	4 cut(s)	87, 902, 2260, 2343
HpyCH4IV	ACGT	5 cut(s)	666, 744, 946, 1366, 1718
HpyF10VI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
HpyF3I	CTNAG	8 cut(s)	188, 924, 1103, 1596, 2077, 2115, 2193, 2373
HpySE526I	ACGT	5 cut(s)	666, 744, 946, 1366, 1718
Hsp92II	CATG	4 cut(s)	457, 1007, 2092, 2444
HspAI	GCGC	2 cut(s)	195, 234
KpnI	GGTACC	1 cut(s)	1825
Ksp22I	TGATCA	1 cut(s)	2214
Kzo9I	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	3 cut(s)	95, 1955, 2040
Lsp1109I	GCAGC	4 cut(s)	164, 358, 1311, 1553
LweI	GCATC	2 cut(s)	946, 1528
MaeI	CTAG	3 cut(s)	885, 1040, 1895
MaeII	ACGT	5 cut(s)	666, 744, 946, 1366, 1718
MaeIII	GTNAC	6 cut(s)	614, 737, 1276, 1333, 1357, 1777
MalI	GATC	8 cut(s)	247, 326, 381, 681, 1317, 1799, 2138, 2216
MbiI	CCGCTC	1 cut(s)	2043
MboI	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
MfeI	CAATTG	2 cut(s)	1560, 1807
MflI	RGATCY	2 cut(s)	245, 2136
MhlI	GDGCHC	1 cut(s)	1924
MlsI	TGGCCA	2 cut(s)	287, 1342
MluNI	TGGCCA	2 cut(s)	287, 1342
MlyI	GAGTC	2 cut(s)	107, 1672
MmeI	TCCRAC	1 cut(s)	407
Mox20I	TGGCCA	2 cut(s)	287, 1342
MroXI	GAANNNNTTC	2 cut(s)	258, 1989
MscI	TGGCCA	2 cut(s)	287, 1342
MseI	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
Msp20I	TGGCCA	2 cut(s)	287, 1342
MspA1I	CMGCKG	2 cut(s)	1066, 1544
MspI	CCGG	1 cut(s)	2305
MspR9I	CCNGG	5 cut(s)	691, 1344, 1875, 2038, 2172
MunI	CAATTG	2 cut(s)	1560, 1807
MvaI	CCWGG	5 cut(s)	691, 1344, 1875, 2038, 2172
MvnI	CGCG	1 cut(s)	236
MwoI	GCNNNNNNNGC	5 cut(s)	140, 149, 455, 956, 1072
NcoI	CCATGG	1 cut(s)	453
NdeI	CATATG	3 cut(s)	38, 321, 367
NdeII	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
NlaIII	CATG	4 cut(s)	457, 1007, 2092, 2444
NlaIV	GGNNCC	4 cut(s)	247, 1823, 1900, 2248
NmuCI	GTSAC	2 cut(s)	737, 1777
NspI	RCATGY	1 cut(s)	2092
PciI	ACATGT	1 cut(s)	2088
PciSI	GCTCTTC	1 cut(s)	402
PdmI	GAANNNNTTC	2 cut(s)	258, 1989
PfeI	GAWTC	5 cut(s)	176, 699, 782, 799, 2069
PflMI	CCANNNNNTGG	1 cut(s)	1943
PkrI	GCNGC	5 cut(s)	154, 373, 451, 1301, 1543
PleI	GAGTC	2 cut(s)	107, 1671
PmaCI	CACGTG	1 cut(s)	1367
PmlI	CACGTG	1 cut(s)	1367
PpsI	GAGTC	2 cut(s)	107, 1671
Ppu21I	YACGTR	3 cut(s)	745, 947, 1367
PscI	ACATGT	1 cut(s)	2088
PshBI	ATTAAT	1 cut(s)	1203
Psp6I	CCWGG	5 cut(s)	689, 1342, 1873, 2036, 2170
PspCI	CACGTG	1 cut(s)	1367
PspGI	CCWGG	5 cut(s)	689, 1342, 1873, 2036, 2170
PspN4I	GGNNCC	4 cut(s)	247, 1823, 1900, 2248
PspPI	GGNCC	5 cut(s)	296, 653, 1094, 1812, 1934
PsrI	GAACNNNNNNTAC	2 cut(s)	2353, 2385
PstNI	CAGNNNCTG	2 cut(s)	161, 2223
PsuI	RGATCY	2 cut(s)	245, 2136
PvuII	CAGCTG	2 cut(s)	1066, 1544
RsaI	GTAC	5 cut(s)	354, 1467, 1823, 2189, 2309
RsaNI	GTAC	5 cut(s)	353, 1466, 1822, 2188, 2308
SalI	GTCGAC	1 cut(s)	2092
SapI	GCTCTTC	1 cut(s)	402
SaqAI	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
SatI	GCNGC	5 cut(s)	153, 372, 450, 1300, 1542
Sau3AI	GATC	8 cut(s)	245, 324, 379, 679, 1315, 1797, 2136, 2214
Sau96I	GGNCC	5 cut(s)	296, 653, 1094, 1812, 1934
SchI	GAGTC	2 cut(s)	107, 1672
ScrFI	CCNGG	5 cut(s)	691, 1344, 1875, 2038, 2172
SduI	GDGCHC	1 cut(s)	1924
SfaNI	GCATC	2 cut(s)	946, 1528
SinI	GGWCC	2 cut(s)	296, 1094
SmlI	CTYRAG	3 cut(s)	554, 1996, 2451
SmoI	CTYRAG	3 cut(s)	554, 1996, 2451
SsiI	CCGC	4 cut(s)	449, 1573, 1675, 2043
SspI	AATATT	2 cut(s)	1083, 1207
SspMI	CTAG	3 cut(s)	885, 1040, 1895
StyD4I	CCNGG	5 cut(s)	689, 1342, 1873, 2036, 2170
StyI	CCWWGG	1 cut(s)	453
TaiI	ACGT	5 cut(s)	669, 747, 949, 1369, 1721
TaqI	TCGA	4 cut(s)	802, 865, 1153, 2093
TatI	WGTACW	1 cut(s)	2187
TauI	GCSGC	1 cut(s)	452
TfiI	GAWTC	5 cut(s)	176, 699, 782, 799, 2069
Tru1I	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
Tru9I	TTAA	6 cut(s)	168, 929, 1077, 1158, 1203, 1284
TseFI	GTSAC	2 cut(s)	737, 1777
TseI	GCWGC	4 cut(s)	152, 371, 1299, 1541
Tsp45I	GTSAC	2 cut(s)	737, 1777
TspGWI	ACGGA	3 cut(s)	954, 1431, 2021
Van91I	CCANNNNNTGG	1 cut(s)	1943
VpaK11BI	GGWCC	2 cut(s)	296, 1094
VspI	ATTAAT	1 cut(s)	1203
XapI	RAATTY	1 cut(s)	1059
XceI	RCATGY	1 cut(s)	2092
XmiI	GTMKAC	3 cut(s)	663, 936, 2093
XmnI	GAANNNNTTC	2 cut(s)	258, 1989
XspI	CTAG	3 cut(s)	885, 1040, 1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.