FvH4_6g43680

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0005195
Physical Location & Seq
Reverse (-)
33748882 .. 33751014
2133 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g43680.t1

Sequence Viewer

Length: 2133 bp
ATGATGAACGCCAATCTCAACTTCAAACTCCTCACAAAATCACTCTGCACCTCCACTCCCCATTTCAAAGATCAACTTCTCATCCCACCCTTCACCTCTCTCCGATGCGGAGCCATTCTACAGTCCCTCACCAACACCAAGTCCCTCCCAAAAGGCCAGAAGCTCCACTCCCTCATGGCCACTTCCGGCAACCTCCTCCACAACACCTACCTCACCACCAAACTCGCCGCTTTTTACGCCAATTGCGGTCAAATGCCCCAAGCCCACTTGCTTTTCGACTCTGTCTTGTTCAAAAATTCATTCTTGTGGAATTTCATGATCAGGGGCTACGCTTGTAACGGGTTTGGACTCGAGTCGATTGTAATGTACCGTGAAATGGTCAATTTGGGTTCAAAGGGAGACAATTTCACCTACCCATTTGTTCTTAAAGCGTGTGGTGATTTGTTGGCTGTGGAAATCGGGAAGAGGGTTCATGGTGAGGTGGTGGTTAGTGGGTTCGCTTCAAATCTCTATGTGGGCAATGCCCTTCTTGCAATGTACTCGAAATTTGGGGAGATGGGGTATGCATATCAGGTGTTTGATAAAATGCCTGAGAGGGATTTGACTACTTGGAACACGATGGTTTCGGGGTATGTGAGGAATGGTGATCCGAGGGAGGCGTTGGCGGTGTTTGAGAGGATGGGGAGGTTTGGAGTGAGGGCGGATGGGACGAGTTTGTTGGGAGTGGTTTCGGGTTGTGGTGAGTTGGTGGCGTTGAAGCTGGGGAAGGCGGTTCATGCGTATGTGGTTCTGAATGGTGGTGAGGTGTGGAATGAGTTTTTGATGAATGCGCTTATTGAAATGTATTGGAAGTGCAGATGTGTGGCGTATTCGAGGAGGTTATTTGAGAGGGTGGAAGTGAAGGATACCGTGTCGTGGAATACTATGATCAGAGGGTATGAGAGGAGTGGTGATGCTTTTGAAAGTTTAAGGCTTTTCTGTCTGATGGTTGTGGAAGGTGTTGAGGTTGATGAAGTGACGACTGTGACTGTGCTTACTAGTTGTGATCAGATCAGCGCCTTGCAATTTGGAATGTCTGTTCATTCATACCTTGTTAGGAAAGGGTTTGGTGCAAATGTCATGGTGGGAACTGCTCTAATAGACATGTATTCTAAATGTGGAAGTTTGTCTTGTTCGCGTCGTTTTTTTTATGACATGCCTAGAAAAAATTTGGTTTCTTGGAGTGCTATGATTTCAGGATATGGAGCTCATGGGAGGGGAGAAGAGGCTATCTCTTGTTATCATGAACTCATAGCAAACAAATTTACTCCTGATGAGGGGCTTCTTACTTCTGTTTTGACAGCGTGTAGTCATGCAGGCCTAGTCAATGAGGGTAAAGACATGTTTAATAGAATGACCAGAGAATATAGAGTAAAGCCAACAGTTGCTCACTATTCGTGTCTGGTGGATCTTCTCGGCAGAGCAGGATGCTTAGATGAAGCATATGAACTCATTAAGACTATGGACGTAGAACCCAGCAGTGATATATGGGCTGCACTTCTTTCTGCTTGCAGGCTACATCGAAATGTTAAACTGGCAGAGATTTCAGCACAGAAGATTTTTGAAATGAACCCAAAAGGAGTGGGTAGTTACATTTGTCTTTCCAATATCTATGCTGCTGAGAAGCGATGGGATGATGTTGAAAGAGTGAGAGCCATGGTGAGAAAGAAGGGACTGAAGAAACCACCTGGCTGCACTTTTGTGGAGTTAGACAAGATGGTTCATCGGTTTCTAGTGGGGGATAAATCACACCCACAAACAGAAGACATTTATGCCAAGTTAAGAGACTTGAACCTGCGACTCAGGGAGGTTGGATACAAGCCTGATACCACTTCCGTGTTGTATGATGTAGAAGAGGAAGTAAAGGAGAAGATGCTTTGGGATCATAGTGAGAGACTGGCAATTGCATTTGCCCTTATTAACACAAGTCCAGGGACCACAATCAGGATCACCAAGAATCTTCGTGTCTGTGTTGATTGCCACACAGTAACGAAAATGATTTCTAAGTTTACAACTCGAGAGATTATAATGCGAGATAACCATAGATTCCACCATTTTAGAGATGGAATTTGTTCTTGTGGTGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

711

Amino Acids

79.94

Weight (kDa)

8.59

Isoelectric Point (pI)

32.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 200 - 238 5.4e-07 PPR repeat family
PPR PF01535 203 - 232 1.5e-09 PPR repeat
PPR_2 PF13041 301 - 348 7.8e-08 PPR repeat family
PPR PF01535 304 - 334 1.3e-06 PPR repeat
PPR PF01535 405 - 433 4e-06 PPR repeat
E_motif PF20431 520 - 582 7.4e-20 E motif
Eplus_motif PF20430 587 - 611 1.8e-08 E+ motif
DYW_deaminase PF14432 618 - 710 2.5e-44 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2066
Acc36I ACCTGC 1 cut(s) 1842
AccII CGCG 1 cut(s) 1177
AciI CCGC 6 cut(s) 108, 228, 246, 665, 701, 770
AclWI GGATC 4 cut(s) 641, 1455, 1929, 1994
AcoI YGGCCR 1 cut(s) 177
AcsI RAATTY 6 cut(s) 295, 310, 545, 1207, 1301, 2106
AcuI CTGAAG 1 cut(s) 1736
AfaI GTAC 2 cut(s) 368, 539
AfiI CCNNNNNNNGG 4 cut(s) 376, 915, 1316, 1983
AflIII ACRYGT 2 cut(s) 1143, 1380
AhlI ACTAGT 1 cut(s) 1037
AjnI CCWGG 2 cut(s) 1726, 1969
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AleI CACNNNNGTG 2 cut(s) 1739, 1874
AloI GAACNNNNNNTCC 2 cut(s) 1062, 1094
AluBI AGCT 3 cut(s) 163, 760, 1247
AluI AGCT 3 cut(s) 163, 760, 1247
Alw21I GWGCWC 1 cut(s) 1249
Alw26I GTCTC 3 cut(s) 393, 1818, 1927
AlwI GGATC 4 cut(s) 641, 1455, 1929, 1994
Ama87I CYCGRG 2 cut(s) 350, 2055
AoxI GGCC 3 cut(s) 154, 177, 1357
ApeKI GCWGC 3 cut(s) 1532, 1655, 1731
ApoI RAATTY 6 cut(s) 295, 310, 545, 1207, 1301, 2106
Asp700I GAANNNNTTC 1 cut(s) 2110
AspLEI GCGC 2 cut(s) 832, 1058
AspS9I GGNCC 1 cut(s) 1974
AvaI CYCGRG 2 cut(s) 350, 2055
AvaII GGWCC 1 cut(s) 1974
BalI TGGCCA 1 cut(s) 179
BanII GRGCYC 1 cut(s) 1249
BbsI GAAGAC 1 cut(s) 1809
Bbv12I GWGCWC 1 cut(s) 1249
BbvI GCAGC 3 cut(s) 1519, 1642, 1718
BccI CCATC 8 cut(s) 550, 613, 673, 698, 979, 1662, 1750, 2096
BcgI CGANNNNNNTGC 2 cut(s) 522, 556
BciT130I CCWGG 2 cut(s) 1728, 1971
BciVI GTATCC 2 cut(s) 898, 1847
BclI TGATCA 3 cut(s) 318, 927, 1045
BcoDI GTCTC 3 cut(s) 393, 1818, 1927
BcuI ACTAGT 1 cut(s) 1037
BfaI CTAG 4 cut(s) 1038, 1200, 1361, 1772
BfmI CTRYAG 1 cut(s) 119
BfoI RGCGCY 1 cut(s) 1059
BfuAI ACCTGC 1 cut(s) 1842
BfuI GTATCC 2 cut(s) 898, 1847
BisI GCNGC 4 cut(s) 228, 1533, 1656, 1732
BlsI GCNGC 4 cut(s) 229, 1534, 1657, 1733
Bme1390I CCNGG 2 cut(s) 1728, 1971
Bme18I GGWCC 1 cut(s) 1974
BmeT110I CYCGRG 2 cut(s) 350, 2055
BmgT120I GGNCC 1 cut(s) 1974
BmiI GGNNCC 2 cut(s) 112, 1975
BmrFI CCNGG 2 cut(s) 1728, 1971
BmsI GCATC 4 cut(s) 95, 943, 1457, 1902
BoxI GACNNNNGTC 1 cut(s) 352
BpiI GAAGAC 1 cut(s) 1809
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
BsaJI CCNNGG 3 cut(s) 650, 1695, 1970
BsaXI ACNNNNNCTCC 4 cut(s) 40, 70, 545, 575
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 915, 1316, 1983
Bse1I ACTGG 2 cut(s) 1578, 1941
Bse3DI GCAATG 2 cut(s) 526, 540
BseBI CCWGG 2 cut(s) 1728, 1971
BseDI CCNNGG 3 cut(s) 650, 1695, 1970
BseGI GGATG 5 cut(s) 81, 684, 709, 1472, 1678
BseLI CCNNNNNNNGG 4 cut(s) 376, 915, 1316, 1983
BseMI GCAATG 2 cut(s) 526, 540
BseMII CTCAG 3 cut(s) 582, 1650, 1855
BseNI ACTGG 2 cut(s) 1578, 1941
BseRI GAGGAG 4 cut(s) 20, 185, 889, 958
BseXI GCAGC 3 cut(s) 1519, 1642, 1718
BseYI CCCAGC 2 cut(s) 760, 1514
BsgI GTGCAG 4 cut(s) 31, 874, 1518, 1717
Bsh1236I CGCG 1 cut(s) 1177
BshFI GGCC 3 cut(s) 156, 179, 1359
BsiHKAI GWGCWC 1 cut(s) 1249
BsiHKCI CYCGRG 2 cut(s) 350, 2055
BsiSI CCGG 1 cut(s) 186
BslFI GGGAC 5 cut(s) 109, 127, 721, 1725, 1987
BslI CCNNNNNNNGG 4 cut(s) 376, 915, 1316, 1983
BsmAI GTCTC 3 cut(s) 393, 1818, 1927
BsmFI GGGAC 5 cut(s) 109, 127, 721, 1725, 1987
BsmI GAATGC 1 cut(s) 832
BsnI GGCC 3 cut(s) 156, 179, 1359
BsoBI CYCGRG 2 cut(s) 350, 2055
Bsp1286I GDGCHC 1 cut(s) 1249
Bsp143I GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
Bsp19I CCATGG 1 cut(s) 1695
BspACI CCGC 6 cut(s) 108, 228, 246, 665, 701, 770
BspANI GGCC 3 cut(s) 156, 179, 1359
BspCNI CTCAG 3 cut(s) 583, 1651, 1854
BspFNI CGCG 1 cut(s) 1177
BspHI TCATGA 2 cut(s) 315, 1282
BspLI GGNNCC 2 cut(s) 112, 1975
BspMI ACCTGC 1 cut(s) 1842
BspPI GGATC 4 cut(s) 641, 1455, 1929, 1994
BsrDI GCAATG 2 cut(s) 526, 540
BsrI ACTGG 2 cut(s) 1578, 1941
BssECI CCNNGG 3 cut(s) 650, 1695, 1970
BssMI GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
BssT1I CCWWGG 1 cut(s) 1695
Bst2UI CCWGG 2 cut(s) 1728, 1971
Bst4CI ACNGT 7 cut(s) 123, 371, 910, 1024, 1030, 1423, 2026
Bst6I CTCTTC 3 cut(s) 458, 1257, 1887
BstC8I GCNNGC 3 cut(s) 1357, 1549, 1553
BstDEI CTNAG 5 cut(s) 591, 1471, 1659, 1841, 2043
BstDSI CCRYGG 1 cut(s) 1695
BstF5I GGATG 5 cut(s) 81, 684, 709, 1472, 1678
BstFNI CGCG 1 cut(s) 1177
BstH2I RGCGCY 1 cut(s) 1059
BstHHI GCGC 2 cut(s) 832, 1058
BstKTI GATC 9 cut(s) 73, 321, 649, 930, 1048, 1053, 1450, 1924, 1989
BstMAI GTCTC 3 cut(s) 393, 1818, 1927
BstMBI GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
BstMWI GCNNNNNNNGC 3 cut(s) 236, 530, 776
BstNI CCWGG 2 cut(s) 1728, 1971
BstNSI RCATGY 3 cut(s) 1147, 1198, 1384
BstPAI GACNNNNGTC 1 cut(s) 352
BstSCI CCNGG 2 cut(s) 1726, 1969
BstSFI CTRYAG 1 cut(s) 119
BstUI CGCG 1 cut(s) 1177
BstV1I GCAGC 3 cut(s) 1519, 1642, 1718
BstV2I GAAGAC 1 cut(s) 1809
BstX2I RGATCY 1 cut(s) 1447
BstYI RGATCY 1 cut(s) 1447
BsuI GTATCC 2 cut(s) 898, 1847
BsuRI GGCC 3 cut(s) 156, 179, 1359
BtgI CCRYGG 1 cut(s) 1695
BtgZI GCGATG 1 cut(s) 1681
BtsCI GGATG 5 cut(s) 81, 684, 709, 1472, 1678
BtsI GCAGTG 1 cut(s) 1525
BtsIMutI CAGTG 1 cut(s) 1525
BveI ACCTGC 1 cut(s) 1842
Cac8I GCNNGC 3 cut(s) 1357, 1549, 1553
CciI TCATGA 2 cut(s) 315, 1282
CfoI GCGC 2 cut(s) 832, 1058
Cfr13I GGNCC 1 cut(s) 1974
CseI GACGC 1 cut(s) 1166
Csp6I GTAC 2 cut(s) 367, 538
CspCI CAANNNNNGTGG 2 cut(s) 1602, 1637
CviQI GTAC 2 cut(s) 367, 538
DdeI CTNAG 5 cut(s) 591, 1471, 1659, 1841, 2043
DpnI GATC 9 cut(s) 72, 320, 648, 929, 1047, 1052, 1449, 1923, 1988
DpnII GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
EaeI YGGCCR 1 cut(s) 177
Eam1104I CTCTTC 3 cut(s) 458, 1257, 1887
EarI CTCTTC 3 cut(s) 458, 1257, 1887
EciI GGCGGA 1 cut(s) 716
Ecl136II GAGCTC 1 cut(s) 1247
Eco130I CCWWGG 1 cut(s) 1695
Eco147I AGGCCT 1 cut(s) 1359
Eco24I GRGCYC 1 cut(s) 1249
Eco47I GGWCC 1 cut(s) 1974
Eco53kI GAGCTC 1 cut(s) 1247
Eco57I CTGAAG 1 cut(s) 1736
Eco88I CYCGRG 2 cut(s) 350, 2055
EcoICRI GAGCTC 1 cut(s) 1247
EcoRII CCWGG 2 cut(s) 1726, 1969
EcoT14I CCWWGG 1 cut(s) 1695
EcoT22I ATGCAT 1 cut(s) 568
EcoT38I GRGCYC 1 cut(s) 1249
ErhI CCWWGG 1 cut(s) 1695
FalI AAGNNNNNCTT 4 cut(s) 60, 92, 1153, 1185
FaqI GGGAC 5 cut(s) 109, 127, 721, 1725, 1987
FauNDI CATATG 1 cut(s) 1483
FbaI TGATCA 3 cut(s) 318, 927, 1045
Fnu4HI GCNGC 4 cut(s) 228, 1533, 1656, 1732
FokI GGATG 5 cut(s) 68, 691, 716, 1479, 1685
FriOI GRGCYC 1 cut(s) 1249
Fsp4HI GCNGC 4 cut(s) 228, 1533, 1656, 1732
FspBI CTAG 4 cut(s) 1038, 1200, 1361, 1772
GlaI GCGC 2 cut(s) 831, 1057
GluI GCNGC 4 cut(s) 228, 1533, 1656, 1732
GsaI CCCAGC 2 cut(s) 764, 1518
HaeII RGCGCY 1 cut(s) 1059
HaeIII GGCC 3 cut(s) 156, 179, 1359
HapII CCGG 1 cut(s) 186
HgaI GACGC 1 cut(s) 1166
HhaI GCGC 2 cut(s) 832, 1058
Hin6I GCGC 2 cut(s) 830, 1056
HinP1I GCGC 2 cut(s) 830, 1056
HinfI GANTC 6 cut(s) 278, 348, 353, 1839, 1996, 2085
HpaII CCGG 1 cut(s) 186
Hpy166II GTNNAC 1 cut(s) 2049
Hpy188I TCNGA 6 cut(s) 104, 651, 792, 932, 984, 1050
Hpy188III TCNNGA 7 cut(s) 316, 460, 1236, 1283, 1310, 1984, 2057
Hpy8I GTNNAC 1 cut(s) 2049
Hpy99I CGWCG 1 cut(s) 1182
HpyAV CCTTC 6 cut(s) 100, 536, 760, 895, 989, 1702
HpyCH4III ACNGT 7 cut(s) 123, 371, 910, 1024, 1030, 1423, 2026
HpyCH4IV ACGT 1 cut(s) 1506
HpyF10VI GCNNNNNNNGC 3 cut(s) 236, 530, 776
HpyF3I CTNAG 5 cut(s) 591, 1471, 1659, 1841, 2043
HpySE526I ACGT 1 cut(s) 1506
HspAI GCGC 2 cut(s) 830, 1056
Ksp22I TGATCA 3 cut(s) 318, 927, 1045
Kzo9I GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
LmnI GCTCC 3 cut(s) 110, 168, 1244
Lsp1109I GCAGC 3 cut(s) 1519, 1642, 1718
LweI GCATC 4 cut(s) 95, 943, 1457, 1902
MaeI CTAG 4 cut(s) 1038, 1200, 1361, 1772
MaeII ACGT 1 cut(s) 1506
MaeIII GTNAC 5 cut(s) 335, 1015, 1024, 1628, 2026
MalI GATC 9 cut(s) 72, 320, 648, 929, 1047, 1052, 1449, 1923, 1988
MboI GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
MboII GAAGA 9 cut(s) 475, 1274, 1442, 1606, 1729, 1814, 1904, 1921, 1991
MfeI CAATTG 2 cut(s) 241, 1941
MflI RGATCY 1 cut(s) 1447
MhlI GDGCHC 1 cut(s) 1249
MlsI TGGCCA 1 cut(s) 179
MluNI TGGCCA 1 cut(s) 179
MlyI GAGTC 4 cut(s) 272, 342, 362, 1833
MmeI TCCRAC 1 cut(s) 1831
Mox20I TGGCCA 1 cut(s) 179
Mph1103I ATGCAT 1 cut(s) 568
MroXI GAANNNNTTC 1 cut(s) 2110
MscI TGGCCA 1 cut(s) 179
MseI TTAA 7 cut(s) 426, 968, 1386, 1494, 1569, 1820, 1959
MslI CAYNNNNRTG 5 cut(s) 304, 780, 1563, 1739, 1874
Msp20I TGGCCA 1 cut(s) 179
MspI CCGG 1 cut(s) 186
MspR9I CCNGG 2 cut(s) 1728, 1971
MunI CAATTG 2 cut(s) 241, 1941
Mva1269I GAATGC 1 cut(s) 832
MvaI CCWGG 2 cut(s) 1728, 1971
MvnI CGCG 1 cut(s) 1177
MwoI GCNNNNNNNGC 3 cut(s) 236, 530, 776
NcoI CCATGG 1 cut(s) 1695
NdeI CATATG 1 cut(s) 1483
NdeII GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
NlaIV GGNNCC 2 cut(s) 112, 1975
NmeAIII GCCGAG 1 cut(s) 1434
NmuCI GTSAC 2 cut(s) 1015, 1024
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 3 cut(s) 1147, 1198, 1384
OliI CACNNNNGTG 2 cut(s) 1739, 1874
PaeR7I CTCGAG 2 cut(s) 350, 2055
PagI TCATGA 2 cut(s) 315, 1282
PceI AGGCCT 1 cut(s) 1359
PciI ACATGT 2 cut(s) 1143, 1380
PctI GAATGC 1 cut(s) 832
PdmI GAANNNNTTC 1 cut(s) 2110
PfeI GAWTC 2 cut(s) 1996, 2085
PflFI GACNNNGTC 1 cut(s) 281
PkrI GCNGC 4 cut(s) 229, 1534, 1657, 1733
PleI GAGTC 4 cut(s) 272, 342, 361, 1833
PpsI GAGTC 4 cut(s) 272, 342, 361, 1833
PscI ACATGT 2 cut(s) 1143, 1380
PshAI GACNNNNGTC 1 cut(s) 352
PsiI TTATAA 1 cut(s) 2066
Psp124BI GAGCTC 1 cut(s) 1249
Psp6I CCWGG 2 cut(s) 1726, 1969
PspFI CCCAGC 2 cut(s) 760, 1514
PspGI CCWGG 2 cut(s) 1726, 1969
PspN4I GGNNCC 2 cut(s) 112, 1975
PspPI GGNCC 1 cut(s) 1974
PspXI VCTCGAGB 1 cut(s) 350
PsuI RGATCY 1 cut(s) 1447
PsyI GACNNNGTC 1 cut(s) 281
RsaI GTAC 2 cut(s) 368, 539
RsaNI GTAC 2 cut(s) 367, 538
RseI CAYNNNNRTG 5 cut(s) 304, 780, 1563, 1739, 1874
SacI GAGCTC 1 cut(s) 1249
SaqAI TTAA 7 cut(s) 426, 968, 1386, 1494, 1569, 1820, 1959
SatI GCNGC 4 cut(s) 228, 1533, 1656, 1732
Sau3AI GATC 9 cut(s) 70, 318, 646, 927, 1045, 1050, 1447, 1921, 1986
Sau96I GGNCC 1 cut(s) 1974
SchI GAGTC 4 cut(s) 272, 342, 362, 1833
ScrFI CCNGG 2 cut(s) 1728, 1971
SduI GDGCHC 1 cut(s) 1249
SfaNI GCATC 4 cut(s) 95, 943, 1457, 1902
SfcI CTRYAG 1 cut(s) 119
Sfr274I CTCGAG 2 cut(s) 350, 2055
SinI GGWCC 1 cut(s) 1974
SlaI CTCGAG 2 cut(s) 350, 2055
SmiMI CAYNNNNRTG 5 cut(s) 304, 780, 1563, 1739, 1874
SmlI CTYRAG 2 cut(s) 350, 2055
SmoI CTYRAG 2 cut(s) 350, 2055
SpeI ACTAGT 1 cut(s) 1037
SseBI AGGCCT 1 cut(s) 1359
SsiI CCGC 6 cut(s) 108, 228, 246, 665, 701, 770
SspMI CTAG 4 cut(s) 1038, 1200, 1361, 1772
SstI GAGCTC 1 cut(s) 1249
StuI AGGCCT 1 cut(s) 1359
StyD4I CCNGG 2 cut(s) 1726, 1969
StyI CCWWGG 1 cut(s) 1695
TaaI ACNGT 7 cut(s) 123, 371, 910, 1024, 1030, 1423, 2026
TaiI ACGT 1 cut(s) 1509
TaqI TCGA 7 cut(s) 276, 351, 356, 542, 872, 1561, 2056
TatI WGTACW 1 cut(s) 537
TauI GCSGC 1 cut(s) 230
TfiI GAWTC 2 cut(s) 1996, 2085
Tru1I TTAA 7 cut(s) 426, 968, 1386, 1494, 1569, 1820, 1959
Tru9I TTAA 7 cut(s) 426, 968, 1386, 1494, 1569, 1820, 1959
TscAI CASTG 1 cut(s) 1525
TseFI GTSAC 2 cut(s) 1015, 1024
TseI GCWGC 3 cut(s) 1532, 1655, 1731
Tsp45I GTSAC 2 cut(s) 1015, 1024
TspGWI ACGGA 1 cut(s) 1864
TspRI CASTG 1 cut(s) 1525
Tth111I GACNNNGTC 1 cut(s) 281
VpaK11BI GGWCC 1 cut(s) 1974
XapI RAATTY 6 cut(s) 295, 310, 545, 1207, 1301, 2106
XceI RCATGY 3 cut(s) 1147, 1198, 1384
XcmI CCANNNNNNNNNTGG 1 cut(s) 2099
XhoI CTCGAG 2 cut(s) 350, 2055
XmnI GAANNNNTTC 1 cut(s) 2110
XspI CTAG 4 cut(s) 1038, 1200, 1361, 1772
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.