Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005195

Physical Location & Seq

Genomic Coordinates Forward (+)

29484360 .. 29486262

Gene Structure 1903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0275500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGAGCAGGTTAATGTGTGAGCTCTTAAATATAAAGGTGGTTAAGAACCCTGGGATTTATCTTGGCCTCCCAACAATTTGGGGGAGATCAAAAAAGGAAGCTCTTTCCTACATCAAGGATAGGGTCAGCAGAAAGATTGATGGTTGGAAGCAAAGTCTGCTAACTATGGCTGGCAGGAAAGTATTGATTAAATCTATTGCTACTGCCATACCCTCCTACCTTATGGCCTGTTTCAAATTTCCCAATTCCATTTGCAATGAGATCAACTCACTTTTAAGCAATTTTTGGTGGGGAGCTAATGACAGTGAAAACAAAATCCACTGGAAGAATTGGGAGTCAATGAGCCTAGCAAAGGATGCTGGGGGGATGGGATTCAGAGATTTACAAGATTTTAACATGGCACTATTAGCAAAACAATGCTGGAGGTTACTACTGGAACCTAATTCCCTATGGGCTAAGGTTCTTAAAGCTAGATACTTTCCTGGTGTTGATTTTAGAAGTGCCACTAAGGGGTACCGGGCCTCATGGGGTTGGTCCAGTCTAATTGAAGCAAGAGATATGATCATGAAGGGGTCATCTTGGCAAGTTATAAATGGTATGTCTATTGATATCTGGAAGGACAACTGGCTTCCACCACCCCACTCTGGCACTATACCCCTTGTCACTAGTGTTCCCCCAAACATTCCTGAGAAAGACTTACGAGTCTGGTCACTGGATCATATCCTCCATCTGCTGCAACCGAGGGAGATCAACCTAATACTTTCTATTCCTATTGGGGATGGGCGTGGTTCTGATAGGCTGATCTGGCCCTGGAACAAAAATGGCAGCTACACTGTTAAATCGGGTTACCATTGGTTACATACCAATCGACACAGGAACTCCCCAAGTACCAACCACACTTCCTATACAGTGGGAAAGAAGACTTGGAGGCTGATTTGGAAAATGGACTCTCTACCCAAAATTAAGAATTTCTTTTGGAGAGTACTTACTAGAGCTATACCTACTCTACTAAATCTATACAGAAGAAAATGTTCCCCTTCTCCTCGGTGCCCTATTTGTGGAGATTTTGATGAAACAATTGAACATACTATACTCTTATGTTCATGGGTTGATCTGGTATGGTTCGGGCCCGCTTTAGGCTTAAGAATCAATAAGAAGAGAATCACGACACTTGATATGTGGTTATTGGATCTACACAAACAGAACACATTACCAACAGAGAAAAAAAGATTGCCTACCTTGATCAGTTTCATCGTTTGGAAGATATGGGTAGCAAGATGCGAGTTCATATATCAGATGAAACCTCTATGCCCCCAGACCCTCATCTTTAGTGTGAACAATCTAGCAAATGAATTCTGGCAAGCAAGTAAGCCGATCCCTCCCACAACAACTCCGATGACCAGGTTACCAATTAGATGGACCCCTCCTCCTCCTGGGTTTGCAAAAATTAATTGTGATGCCTCATGGTCTGACCCATCCTCTGTAAGTGGATTTGGAGTAATAATCCGAGATACTCTGGGTGCTGTTATTGGTGGATCCACTCGAGCGGGCTTCTGTGGGTCGGCAGCTGTGGCTGGAGCAAATGCCATTTTGGATGGGATAAATGCTGCACTTGAAATGAATCTGTCAAAGAGATTAGAAGGAGGAGTCATCCTTTCAATGATATCTGCTGGGAATGGATCCCTCGTGAAGCGAATTCAGTTGCTCACACTGCAGCTGCGGTTGCCAAGGAGAGGGTGGGTCTTCACAGATGGGCAAATGTGCCACCAGCATCTCTTCTCCGAGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

596

Amino Acids

67.72

Weight (kDa)

9.84

Isoelectric Point (pI)

39.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	277 - 374	1.3e-15	zinc-binding in reverse transcriptase
RVT_3	PF13456	484 - 543	4.3e-06	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005195)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g43680
malus_domestica	MD04G1244800.v1.1 MD05G1188100.v1.1 MD09G1103700.v1.1
prunus_persica	Prupe.3G221900_v2.0.a1 Prupe.6G361400_v2.0.a1
pyrus_communis	pycom04g21560
rosa_chinensis	RchiOBHm_Chr2g0127291 RchiOBHm_Chr2g0127861 RchiOBHm_Chr2g0160301
rosa_laevigata	RLG00000018967 RLG00000021211
rosa_multiflora	Rmu_sc0007523.1_g000001 Rmu_sc0008269.1_g000001 Rmu_sc0008949.1_g000007 Rmu_sc0029272.1_g000003
rosa_roxburghii	Rroxscaffold_2G00089870 Rroxscaffold_2G00116310
rosa_rugosa	Rorug02G0275400 Rorug02G0275500 Rorug02G0275600 Rorug02G0275700 Rorug02G0482900
rosa_samantha	Rh2BG336000 Rh2BG561700 Rh2CG314200 Rh2CG532500 Rh2DG353700
rosa_wichuraiana	Rw2G026490 Rw2G045360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	590
AasI	GACNNNNNNGTC	1 cut(s)	701
Acc65I	GGTACC	1 cut(s)	513
AccB1I	GGYRCC	2 cut(s)	513, 1047
AccBSI	CCGCTC	1 cut(s)	1547
AciI	CCGC	3 cut(s)	1131, 1547, 1720
AclWI	GGATC	7 cut(s)	723, 1197, 1369, 1530, 1543, 1674, 1687
AcsI	RAATTY	4 cut(s)	236, 967, 1352, 1695
AfaI	GTAC	4 cut(s)	515, 889, 984, 1787
AfiI	CCNNNNNNNGG	7 cut(s)	352, 510, 644, 1058, 1136, 1433, 1733
AflII	CTTAAG	1 cut(s)	1141
AgsI	TTSAA	5 cut(s)	235, 548, 1082, 1616, 1659
AhlI	ACTAGT	1 cut(s)	665
AjnI	CCWGG	5 cut(s)	49, 481, 809, 1400, 1432
AjuI	GAANNNNNNNTTGG	2 cut(s)	907, 939
AluBI	AGCT	8 cut(s)	22, 101, 296, 470, 828, 995, 1568, 1717
AluI	AGCT	8 cut(s)	22, 101, 296, 470, 828, 995, 1568, 1717
Alw21I	GWGCWC	1 cut(s)	24
AlwI	GGATC	7 cut(s)	723, 1197, 1369, 1530, 1543, 1674, 1687
Ama87I	CYCGRG	1 cut(s)	1542
AoxI	GGCC	5 cut(s)	64, 225, 519, 806, 1127
ApaI	GGGCCC	1 cut(s)	1131
ApeKI	GCWGC	6 cut(s)	733, 825, 1565, 1607, 1714, 1717
ApoI	RAATTY	4 cut(s)	236, 967, 1352, 1695
AseI	ATTAAT	1 cut(s)	1449
Asp700I	GAANNNNTTC	1 cut(s)	1030
Asp718I	GGTACC	1 cut(s)	513
AspS9I	GGNCC	6 cut(s)	519, 534, 807, 1127, 1128, 1419
AsuC2I	CCSGG	1 cut(s)	518
AvaI	CYCGRG	1 cut(s)	1542
AvaII	GGWCC	2 cut(s)	534, 1419
BaeGI	GKGCMC	2 cut(s)	1052, 1131
BamHI	GGATCC	2 cut(s)	1535, 1679
BanI	GGYRCC	2 cut(s)	513, 1047
BanII	GRGCYC	2 cut(s)	24, 1131
BauI	CACGAG	1 cut(s)	1685
BbsI	GAAGAC	2 cut(s)	926, 1735
Bbv12I	GWGCWC	1 cut(s)	24
BbvI	GCAGC	6 cut(s)	720, 837, 1577, 1594, 1704, 1726
BccI	CCATC	8 cut(s)	134, 361, 735, 773, 1410, 1483, 1589, 1745
BciT130I	CCWGG	5 cut(s)	51, 483, 811, 1402, 1434
BclI	TGATCA	2 cut(s)	561, 1242
BcnI	CCSGG	1 cut(s)	518
BcuI	ACTAGT	1 cut(s)	665
BfaI	CTAG	5 cut(s)	347, 471, 666, 990, 1343
BfmI	CTRYAG	1 cut(s)	1712
BfrI	CTTAAG	1 cut(s)	1141
BisI	GCNGC	6 cut(s)	734, 826, 1566, 1608, 1715, 1718
BlsI	GCNGC	6 cut(s)	735, 827, 1567, 1609, 1716, 1719
BmcAI	AGTACT	2 cut(s)	984, 1787
Bme1390I	CCNGG	6 cut(s)	51, 483, 518, 811, 1402, 1434
Bme18I	GGWCC	2 cut(s)	534, 1419
BmeT110I	CYCGRG	1 cut(s)	1542
BmgT120I	GGNCC	6 cut(s)	519, 534, 807, 1127, 1128, 1419
BmiI	GGNNCC	7 cut(s)	438, 515, 1049, 1129, 1421, 1537, 1681
BmrFI	CCNGG	6 cut(s)	51, 483, 518, 811, 1402, 1434
BmsI	GCATC	4 cut(s)	346, 1268, 1447, 1780
BpiI	GAAGAC	2 cut(s)	926, 1735
BplI	GAGNNNNNCTC	2 cut(s)	251, 283
BpmI	CTGGAG	2 cut(s)	442, 1596
Bpu10I	CCTNAGC	1 cut(s)	456
BpuMI	CCSGG	1 cut(s)	518
BsaJI	CCNNGG	7 cut(s)	49, 50, 740, 809, 1043, 1433, 1727
BsaXI	ACNNNNNCTCC	6 cut(s)	863, 893, 1375, 1405, 1411, 1441
Bsc4I	CCNNNNNNNGG	7 cut(s)	352, 510, 644, 1058, 1136, 1433, 1733
Bse1I	ACTGG	5 cut(s)	326, 438, 537, 629, 717
Bse3DI	GCAATG	1 cut(s)	262
BseBI	CCWGG	5 cut(s)	51, 483, 811, 1402, 1434
BseDI	CCNNGG	7 cut(s)	49, 50, 740, 809, 1043, 1433, 1727
BseGI	GGATG	6 cut(s)	361, 372, 784, 1475, 1600, 1650
BseLI	CCNNNNNNNGG	7 cut(s)	352, 510, 644, 1058, 1136, 1433, 1733
BseMI	GCAATG	1 cut(s)	262
BseMII	CTCAG	1 cut(s)	678
BseNI	ACTGG	5 cut(s)	326, 438, 537, 629, 717
BseRI	GAGGAG	4 cut(s)	1032, 1416, 1419, 1659
BseSI	GKGCMC	2 cut(s)	1052, 1131
BseXI	GCAGC	6 cut(s)	720, 837, 1577, 1594, 1704, 1726
BseYI	CCCAGC	2 cut(s)	359, 1670
BsgI	GTGCAG	1 cut(s)	1593
BshFI	GGCC	5 cut(s)	66, 227, 521, 808, 1129
BshNI	GGYRCC	2 cut(s)	513, 1047
BsiHKAI	GWGCWC	1 cut(s)	24
BsiHKCI	CYCGRG	1 cut(s)	1542
BsiSI	CCGG	1 cut(s)	517
BslI	CCNNNNNNNGG	7 cut(s)	352, 510, 644, 1058, 1136, 1433, 1733
BsnI	GGCC	5 cut(s)	66, 227, 521, 808, 1129
BsoBI	CYCGRG	1 cut(s)	1542
Bsp120I	GGGCCC	1 cut(s)	1127
Bsp1286I	GDGCHC	3 cut(s)	24, 1052, 1131
BspACI	CCGC	3 cut(s)	1131, 1547, 1720
BspANI	GGCC	5 cut(s)	66, 227, 521, 808, 1129
BspCNI	CTCAG	1 cut(s)	679
BspHI	TCATGA	1 cut(s)	564
BspLI	GGNNCC	7 cut(s)	438, 515, 1049, 1129, 1421, 1537, 1681
BspMAI	CTGCAG	1 cut(s)	1716
BspPI	GGATC	7 cut(s)	723, 1197, 1369, 1530, 1543, 1674, 1687
BspT107I	GGYRCC	2 cut(s)	513, 1047
BspTI	CTTAAG	1 cut(s)	1141
BsrBI	CCGCTC	1 cut(s)	1547
BsrDI	GCAATG	1 cut(s)	262
BsrI	ACTGG	5 cut(s)	326, 438, 537, 629, 717
BssECI	CCNNGG	7 cut(s)	49, 50, 740, 809, 1043, 1433, 1727
BssSI	CACGAG	1 cut(s)	1685
BssT1I	CCWWGG	1 cut(s)	1727
Bst2BI	CACGAG	1 cut(s)	1685
Bst2UI	CCWGG	5 cut(s)	51, 483, 811, 1402, 1434
Bst4CI	ACNGT	3 cut(s)	305, 835, 910
Bst6I	CTCTTC	2 cut(s)	1151, 1781
BstAFI	CTTAAG	1 cut(s)	1141
BstAPI	GCANNNNNTGC	2 cut(s)	157, 356
BstC8I	GCNNGC	4 cut(s)	172, 1131, 1362, 1549
BstDEI	CTNAG	3 cut(s)	456, 507, 687
BstEII	GGTNACC	2 cut(s)	845, 1404
BstENI	CCTNNNNNAGG	1 cut(s)	350
BstF5I	GGATG	6 cut(s)	361, 372, 784, 1475, 1600, 1650
BstMWI	GCNNNNNNNGC	7 cut(s)	157, 356, 407, 805, 1571, 1711, 1723
BstNI	CCWGG	5 cut(s)	51, 483, 811, 1402, 1434
BstPI	GGTNACC	2 cut(s)	845, 1404
BstSCI	CCNGG	6 cut(s)	49, 481, 516, 809, 1400, 1432
BstSFI	CTRYAG	1 cut(s)	1712
BstSLI	GKGCMC	2 cut(s)	1052, 1131
BstV1I	GCAGC	6 cut(s)	720, 837, 1577, 1594, 1704, 1726
BstV2I	GAAGAC	2 cut(s)	926, 1735
BstX2I	RGATCY	3 cut(s)	1189, 1535, 1679
BstXI	CCANNNNNNTGG	2 cut(s)	78, 1416
BstYI	RGATCY	3 cut(s)	1189, 1535, 1679
BsuRI	GGCC	5 cut(s)	66, 227, 521, 808, 1129
BtsCI	GGATG	6 cut(s)	361, 372, 784, 1475, 1600, 1650
BtsI	GCAGTG	1 cut(s)	1709
BtsIMutI	CAGTG	6 cut(s)	310, 319, 710, 831, 915, 1709
Cac8I	GCNNGC	4 cut(s)	172, 1131, 1362, 1549
CciI	TCATGA	1 cut(s)	564
Cfr13I	GGNCC	6 cut(s)	519, 534, 807, 1127, 1128, 1419
CsiI	ACCWGGT	1 cut(s)	1400
Csp6I	GTAC	4 cut(s)	514, 888, 983, 1786
CviAII	CATG	5 cut(s)	397, 525, 565, 1104, 1464
CviQI	GTAC	4 cut(s)	514, 888, 983, 1786
DdeI	CTNAG	3 cut(s)	456, 507, 687
DrdI	GACNNNNNNGTC	1 cut(s)	701
DseDI	GACNNNNNNGTC	1 cut(s)	701
Eam1104I	CTCTTC	2 cut(s)	1151, 1781
EarI	CTCTTC	2 cut(s)	1151, 1781
Ecl136II	GAGCTC	1 cut(s)	22
Eco130I	CCWWGG	1 cut(s)	1727
Eco24I	GRGCYC	2 cut(s)	24, 1131
Eco32I	GATATC	2 cut(s)	610, 1665
Eco47I	GGWCC	2 cut(s)	534, 1419
Eco53kI	GAGCTC	1 cut(s)	22
Eco88I	CYCGRG	1 cut(s)	1542
Eco91I	GGTNACC	2 cut(s)	845, 1404
EcoICRI	GAGCTC	1 cut(s)	22
EcoNI	CCTNNNNNAGG	1 cut(s)	350
EcoO65I	GGTNACC	2 cut(s)	845, 1404
EcoRI	GAATTC	2 cut(s)	1352, 1695
EcoRII	CCWGG	5 cut(s)	49, 481, 809, 1400, 1432
EcoRV	GATATC	2 cut(s)	610, 1665
EcoT14I	CCWWGG	1 cut(s)	1727
EcoT38I	GRGCYC	2 cut(s)	24, 1131
ErhI	CCWWGG	1 cut(s)	1727
FaeI	CATG	5 cut(s)	400, 528, 568, 1107, 1467
FalI	AAGNNNNNCTT	2 cut(s)	956, 988
FatI	CATG	5 cut(s)	396, 524, 564, 1103, 1463
FauI	CCCGC	2 cut(s)	1138, 1540
FbaI	TGATCA	2 cut(s)	561, 1242
Fnu4HI	GCNGC	6 cut(s)	734, 826, 1566, 1608, 1715, 1718
FokI	GGATG	6 cut(s)	368, 379, 791, 1462, 1607, 1637
FriOI	GRGCYC	2 cut(s)	24, 1131
Fsp4HI	GCNGC	6 cut(s)	734, 826, 1566, 1608, 1715, 1718
FspBI	CTAG	5 cut(s)	347, 471, 666, 990, 1343
GluI	GCNGC	6 cut(s)	734, 826, 1566, 1608, 1715, 1718
GsaI	CCCAGC	2 cut(s)	363, 1674
GsuI	CTGGAG	2 cut(s)	442, 1596
HaeIII	GGCC	5 cut(s)	66, 227, 521, 808, 1129
HapII	CCGG	1 cut(s)	517
Hin1II	CATG	5 cut(s)	400, 528, 568, 1107, 1467
HinfI	GANTC	8 cut(s)	335, 372, 702, 947, 1146, 1161, 1621, 1647
HpaII	CCGG	1 cut(s)	517
Hpy166II	GTNNAC	1 cut(s)	1336
Hpy188I	TCNGA	7 cut(s)	377, 793, 1296, 1395, 1471, 1508, 1783
Hpy188III	TCNNGA	5 cut(s)	565, 613, 686, 1165, 1687
Hpy8I	GTNNAC	1 cut(s)	1336
HpyAV	CCTTC	4 cut(s)	562, 610, 1047, 1634
HpyCH4III	ACNGT	3 cut(s)	305, 835, 910
HpyCH4V	TGCA	5 cut(s)	255, 736, 1442, 1610, 1714
HpyF10VI	GCNNNNNNNGC	7 cut(s)	157, 356, 407, 805, 1571, 1711, 1723
HpyF3I	CTNAG	3 cut(s)	456, 507, 687
Hsp92II	CATG	5 cut(s)	400, 528, 568, 1107, 1467
KpnI	GGTACC	1 cut(s)	517
Ksp22I	TGATCA	2 cut(s)	561, 1242
LmnI	GCTCC	2 cut(s)	293, 1577
Lsp1109I	GCAGC	6 cut(s)	720, 837, 1577, 1594, 1704, 1726
LweI	GCATC	4 cut(s)	346, 1268, 1447, 1780
MabI	ACCWGGT	1 cut(s)	1400
MaeI	CTAG	5 cut(s)	347, 471, 666, 990, 1343
MaeIII	GTNAC	6 cut(s)	426, 661, 708, 845, 855, 1404
MbiI	CCGCTC	1 cut(s)	1547
MboII	GAAGA	7 cut(s)	337, 931, 1035, 1168, 1273, 1735, 1768
MfeI	CAATTG	1 cut(s)	1077
MflI	RGATCY	3 cut(s)	1189, 1535, 1679
MhlI	GDGCHC	3 cut(s)	24, 1052, 1131
MlyI	GAGTC	4 cut(s)	344, 711, 941, 1656
MmeI	TCCRAC	1 cut(s)	125
MroXI	GAANNNNTTC	1 cut(s)	1030
MspA1I	CMGCKG	2 cut(s)	1568, 1717
MspCI	CTTAAG	1 cut(s)	1141
MspI	CCGG	1 cut(s)	517
MspR9I	CCNGG	6 cut(s)	51, 483, 518, 811, 1402, 1434
MunI	CAATTG	1 cut(s)	1077
MvaI	CCWGG	5 cut(s)	51, 483, 811, 1402, 1434
MwoI	GCNNNNNNNGC	7 cut(s)	157, 356, 407, 805, 1571, 1711, 1723
NciI	CCSGG	1 cut(s)	518
NlaIII	CATG	5 cut(s)	400, 528, 568, 1107, 1467
NlaIV	GGNNCC	7 cut(s)	438, 515, 1049, 1129, 1421, 1537, 1681
NmuCI	GTSAC	2 cut(s)	661, 708
PaeR7I	CTCGAG	1 cut(s)	1542
PagI	TCATGA	1 cut(s)	564
PasI	CCCWGGG	1 cut(s)	50
PdmI	GAANNNNTTC	1 cut(s)	1030
PfeI	GAWTC	4 cut(s)	372, 1146, 1161, 1621
PkrI	GCNGC	6 cut(s)	735, 827, 1567, 1609, 1716, 1719
PleI	GAGTC	4 cut(s)	343, 710, 941, 1655
PpsI	GAGTC	4 cut(s)	343, 710, 941, 1655
PshBI	ATTAAT	1 cut(s)	1449
PsiI	TTATAA	1 cut(s)	590
Psp124BI	GAGCTC	1 cut(s)	24
Psp6I	CCWGG	5 cut(s)	49, 481, 809, 1400, 1432
PspEI	GGTNACC	2 cut(s)	845, 1404
PspFI	CCCAGC	2 cut(s)	359, 1670
PspGI	CCWGG	5 cut(s)	49, 481, 809, 1400, 1432
PspN4I	GGNNCC	7 cut(s)	438, 515, 1049, 1129, 1421, 1537, 1681
PspOMI	GGGCCC	1 cut(s)	1127
PspPI	GGNCC	6 cut(s)	519, 534, 807, 1127, 1128, 1419
PspXI	VCTCGAGB	1 cut(s)	1542
PsrI	GAACNNNNNNTAC	2 cut(s)	1074, 1106
PstI	CTGCAG	1 cut(s)	1716
PsuI	RGATCY	3 cut(s)	1189, 1535, 1679
PvuII	CAGCTG	2 cut(s)	1568, 1717
RsaI	GTAC	4 cut(s)	515, 889, 984, 1787
RsaNI	GTAC	4 cut(s)	514, 888, 983, 1786
SacI	GAGCTC	1 cut(s)	24
SatI	GCNGC	6 cut(s)	734, 826, 1566, 1608, 1715, 1718
Sau96I	GGNCC	6 cut(s)	519, 534, 807, 1127, 1128, 1419
ScaI	AGTACT	2 cut(s)	984, 1787
SchI	GAGTC	4 cut(s)	344, 711, 941, 1656
ScrFI	CCNGG	6 cut(s)	51, 483, 518, 811, 1402, 1434
SduI	GDGCHC	3 cut(s)	24, 1052, 1131
SexAI	ACCWGGT	1 cut(s)	1400
SfaNI	GCATC	4 cut(s)	346, 1268, 1447, 1780
SfcI	CTRYAG	1 cut(s)	1712
Sfr274I	CTCGAG	1 cut(s)	1542
SinI	GGWCC	2 cut(s)	534, 1419
SlaI	CTCGAG	1 cut(s)	1542
SmlI	CTYRAG	2 cut(s)	1141, 1542
SmoI	CTYRAG	2 cut(s)	1141, 1542
SpeI	ACTAGT	1 cut(s)	665
SsiI	CCGC	3 cut(s)	1131, 1547, 1720
SspMI	CTAG	5 cut(s)	347, 471, 666, 990, 1343
SstI	GAGCTC	1 cut(s)	24
StyD4I	CCNGG	6 cut(s)	49, 481, 516, 809, 1400, 1432
StyI	CCWWGG	1 cut(s)	1727
TaaI	ACNGT	3 cut(s)	305, 835, 910
TaqI	TCGA	2 cut(s)	868, 1543
TatI	WGTACW	2 cut(s)	982, 1785
TfiI	GAWTC	4 cut(s)	372, 1146, 1161, 1621
TscAI	CASTG	6 cut(s)	310, 326, 717, 838, 915, 1716
TseFI	GTSAC	2 cut(s)	661, 708
TseI	GCWGC	6 cut(s)	733, 825, 1565, 1607, 1714, 1717
Tsp45I	GTSAC	2 cut(s)	661, 708
TspDTI	ATGAA	8 cut(s)	581, 1086, 1092, 1240, 1276, 1313, 1365, 1634
TspRI	CASTG	6 cut(s)	310, 326, 717, 838, 915, 1716
Vha464I	CTTAAG	1 cut(s)	1141
VpaK11BI	GGWCC	2 cut(s)	534, 1419
VspI	ATTAAT	1 cut(s)	1449
XagI	CCTNNNNNAGG	1 cut(s)	350
XapI	RAATTY	4 cut(s)	236, 967, 1352, 1695
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1734
XhoI	CTCGAG	1 cut(s)	1542
XmnI	GAANNNNTTC	1 cut(s)	1030
XspI	CTAG	5 cut(s)	347, 471, 666, 990, 1343
ZrmI	AGTACT	2 cut(s)	984, 1787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.