Rroxscaffold_2G00089870

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0005195
Physical Location & Seq
Forward (+)
11767994 .. 11770171
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00089870.1

Sequence Viewer

Length: 2130 bp
ATGAACGGCAATGCCAACATCAAACTCCTCAGGAGATCACTTTGCAGCACCACCGCCCATTTCAAACAACAACCTCTCATCCCACCCTTCACTTCTCTGCAATGTGGAGCCATTCTTCAGTCTCTCACCAACACCAAGTCTCTCCCCAAAGGCCAGAAACTCCACGCCCTCATGCTCACTTGTGGGAATCTTCTAGATAACACCTATCTAAGCTCCAAGCTCGCTTCTTTTTACGCCAGTTGCGGTAACATGGGCCAAGCCCAGCTGGTTTTTGACGGCGTTGTGGTTAAAAATTCGTTCTTGTGGAATTTCATGATTAGGGGTTACGCTTGCAATGGGTTTGCGTTGGATTCGATTGTATTGTACCGTGAAATGATTGGTCTTGGGATAAAGGGGGATAATTTCACGTACCCTTTTGTTCTTAAAGCGTGTGCTGATGTGTTGGCTGTGGAAATTGGGAGGAGGGTTCATGGTGAGGTTGTGGTTAGTGGGTTTGAGTCGAATGTTTATGTGGGCAATGCTCTTGTTGCAATGTACTCCAAGTTTGGGGATATGGGATATGCGTATAAGGTGTTCGATAGAATGCCTGAGAGAGATTTGACATCTTGGAACACTATGGTTTCGGGTTATGTCAAGAATGGTAATCCGAGAGAGGGTTTGGCGGTGTTTGAGAAAATGGGGAAGTCTGGATTAGGGGCTGATGGGACAACTTTGCTGGGAGTTGTTTCGGCTTGTGGTGAGTTGATGGCATTGAAGCAGGGGAAGGCAATTCATGCGTGTGTGGTGAGGAAAAGTGGTGAAGTATGGAATGAGTTTTTGACAAATTCTCTTATTGAAATGTATTGTAAGTGCAAGTGTGTGGCTTATTCGAGGCGGTTATTTGATGGGGCGGAAGTGAAAGACACCGTGTCATGGAATTCTATGATTAGAGGTTATGAGAGGAATGGCGATGCATTTGAAAGTTTAAGGCTTTTCTGTCGAATGGTTATGGAAGGTGCAGAGGTTGATGAAGTAACTATTGTGACTATGCTTACTTGTTGTGACCAGATCAACGCCTTGCAATTTGGCATGTCTGTTCATTCATACCTTGTTAAGAAAGGGTTTGGTGCAAATCTCATAGTGGGAACTGCTCTTATAGACATGTATTCTAAATGTGGAAGTTTGTCTTGTTCGCGTCGTTTTTTTGATGACATGCCCAGAAAAAATTTGGTTTCTTGGAGTGCTATGATTTCAGGATATGGAGCTCATGGGAGGGGAGAAGAGGCCATCTCCTGTTATCATGAACTCATAGCAAACAAGTTTAGTCCTGATGAGGGGGTCCTTACTTCTGTTTTGTCAGCATGTAGCCATGCAGGCCTAGTCAATGAGGGTAAAGATATGTTTAATAGAATGACCCGAGAATACAAAGTGAAGCCAACAGTTGCTCACTATTCATGTCTGGTGGATCTTCTCGGCAGAGCAGGGCGCTTAGATGAAGCATATGAACTCATTAAGACTATTGAAGTAGAACCCAGCAGTGATATATGGGCTGCACTTCTCTCTGCTTGCAGGCTATATCCAAATGTCAAGCTGGCGGAGATTTCAGCACAGAAGATTTTCGAAATGAACCCAGAGGGAGTGGGTAGTTACATTTGTCTTTCCAATATCTATGCCGCTGAGAAGCGATGGGATGATGTGGAAAGAGTGAGAGCCATGGTGAGAAAGAAGGGACTGAAGAAACCACCTGGCTGCACTTTTGTGGAGTTAGACAAGATGGTTCATCGGTTCTTAGTTGGGGATAAGTCGCACCCACAAACAGAGGATATTTATGCCAAGTTAAAAGACTTGAACCTGCGACTCAGGGAGGTTGGATACAAGCCTGATACCACTTCTGTGTTGTATGATGTAGAAGAAGAAATAAAGGAGAAGATGCTTTGGGATCATAGTGAAAGATTGGCAATTGCATTTGCCCTTATTAACACAAGACCAGGGACCACAATCAGGATCACCAAGAATCTTCGTATCTGTGTTGATTGCCACACAGTAACGAAAATGATTTCTAAATTTACGGCTCGAGAGATTATAATGCGAGATAACCATAGGTTCCACCATTTTAGAGATGGATTTTGCTCTTGTGGTGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

709

Amino Acids

79.27

Weight (kDa)

8.54

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 199 - 238 4.7e-06 PPR repeat family
PPR PF01535 202 - 231 2.6e-08 PPR repeat
PPR_2 PF13041 300 - 347 1.6e-08 PPR repeat family
PPR PF01535 303 - 332 3.8e-07 PPR repeat
PPR_2 PF13041 402 - 449 2.1e-06 PPR repeat family
PPR PF01535 404 - 432 4e-06 PPR repeat
E_motif PF20431 519 - 581 1.1e-19 E motif
Eplus_motif PF20430 586 - 609 3.7e-08 E+ motif
DYW_deaminase PF14432 617 - 709 1.4e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2063
Acc36I ACCTGC 1 cut(s) 1839
AccII CGCG 1 cut(s) 1174
AciI CCGC 7 cut(s) 54, 243, 662, 874, 890, 1574, 1653
AclWI GGATC 3 cut(s) 1452, 1926, 1991
AcsI RAATTY 6 cut(s) 292, 307, 823, 916, 1204, 2042
AcuI CTGAAG 2 cut(s) 101, 1733
AfaI GTAC 3 cut(s) 365, 410, 536
AfiI CCNNNNNNNGG 5 cut(s) 546, 653, 912, 1313, 1980
AflIII ACRYGT 1 cut(s) 1140
AgsI TTSAA 6 cut(s) 64, 754, 836, 959, 1502, 1828
AhdI GACNNNNNGTC 1 cut(s) 907
AjnI CCWGG 2 cut(s) 1723, 1966
AleI CACNNNNGTG 2 cut(s) 1736, 1871
AluBI AGCT 5 cut(s) 213, 220, 265, 1244, 1570
AluI AGCT 5 cut(s) 213, 220, 265, 1244, 1570
Alw21I GWGCWC 1 cut(s) 1246
Alw26I GTCTC 2 cut(s) 126, 144
AlwI GGATC 3 cut(s) 1452, 1926, 1991
Ama87I CYCGRG 2 cut(s) 1395, 2052
AoxI GGCC 4 cut(s) 151, 253, 1263, 1354
ApeKI GCWGC 3 cut(s) 45, 1529, 1728
ApoI RAATTY 6 cut(s) 292, 307, 823, 916, 1204, 2042
Asp700I GAANNNNTTC 1 cut(s) 1595
AspLEI GCGC 1 cut(s) 1467
AspS9I GGNCC 3 cut(s) 253, 1318, 1971
AsuHPI GGTGA 8 cut(s) 118, 485, 749, 796, 809, 1708, 1978, 2129
AsuII TTCGAA 1 cut(s) 1599
AvaI CYCGRG 2 cut(s) 1395, 2052
AvaII GGWCC 2 cut(s) 1318, 1971
AxyI CCTNAGG 1 cut(s) 29
BanII GRGCYC 1 cut(s) 1246
Bbv12I GWGCWC 1 cut(s) 1246
BbvI GCAGC 3 cut(s) 57, 1516, 1715
BccI CCATC 7 cut(s) 695, 739, 878, 1274, 1659, 1747, 2093
BceAI ACGGC 3 cut(s) 22, 292, 2064
BciT130I CCWGG 2 cut(s) 1725, 1968
BciVI GTATCC 1 cut(s) 1844
BcoDI GTCTC 2 cut(s) 126, 144
BfaI CTAG 2 cut(s) 194, 1358
BfoI RGCGCY 1 cut(s) 1468
BfuAI ACCTGC 1 cut(s) 1839
BfuI GTATCC 1 cut(s) 1844
BglI GCCNNNNNGGC 1 cut(s) 1353
BisI GCNGC 4 cut(s) 46, 1530, 1653, 1729
BlsI GCNGC 4 cut(s) 47, 1531, 1654, 1730
Bme1390I CCNGG 2 cut(s) 1725, 1968
Bme18I GGWCC 2 cut(s) 1318, 1971
BmeRI GACNNNNNGTC 1 cut(s) 907
BmeT110I CYCGRG 2 cut(s) 1395, 2052
BmgT120I GGNCC 3 cut(s) 253, 1318, 1971
BmiI GGNNCC 4 cut(s) 109, 1319, 1972, 2084
BmrFI CCNGG 2 cut(s) 1725, 1968
BmsI GCATC 2 cut(s) 940, 1899
BplI GAGNNNNNCTC 2 cut(s) 1253, 1285
Bpu14I TTCGAA 1 cut(s) 1599
BsaAI YACGTR 1 cut(s) 408
BsaJI CCNNGG 2 cut(s) 1692, 1967
Bsc4I CCNNNNNNNGG 5 cut(s) 546, 653, 912, 1313, 1980
Bse1I ACTGG 1 cut(s) 237
Bse21I CCTNAGG 1 cut(s) 29
Bse3DI GCAATG 5 cut(s) 16, 107, 340, 523, 537
BseBI CCWGG 2 cut(s) 1725, 1968
BseDI CCNNGG 2 cut(s) 1692, 1967
BseGI GGATG 2 cut(s) 78, 1675
BseLI CCNNNNNNNGG 5 cut(s) 546, 653, 912, 1313, 1980
BseMI GCAATG 5 cut(s) 16, 107, 340, 523, 537
BseMII CTCAG 4 cut(s) 43, 579, 1647, 1852
BseNI ACTGG 1 cut(s) 237
BseRI GAGGAG 2 cut(s) 17, 475
BseXI GCAGC 3 cut(s) 57, 1516, 1715
BseYI CCCAGC 3 cut(s) 261, 715, 1511
BsgI GTGCAG 3 cut(s) 1017, 1515, 1714
Bsh1236I CGCG 1 cut(s) 1174
BshFI GGCC 4 cut(s) 153, 255, 1265, 1356
BsiHKAI GWGCWC 1 cut(s) 1246
BsiHKCI CYCGRG 2 cut(s) 1395, 2052
BslFI GGGAC 3 cut(s) 718, 1722, 1984
BslI CCNNNNNNNGG 5 cut(s) 546, 653, 912, 1313, 1980
BsmAI GTCTC 2 cut(s) 126, 144
BsmFI GGGAC 3 cut(s) 718, 1722, 1984
BsmI GAATGC 1 cut(s) 588
BsnI GGCC 4 cut(s) 153, 255, 1265, 1356
BsoBI CYCGRG 2 cut(s) 1395, 2052
Bsp119I TTCGAA 1 cut(s) 1599
Bsp1286I GDGCHC 1 cut(s) 1246
Bsp143I GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
Bsp19I CCATGG 1 cut(s) 1692
BspACI CCGC 7 cut(s) 54, 243, 662, 874, 890, 1574, 1653
BspANI GGCC 4 cut(s) 153, 255, 1265, 1356
BspCNI CTCAG 4 cut(s) 42, 580, 1648, 1851
BspFNI CGCG 1 cut(s) 1174
BspHI TCATGA 2 cut(s) 312, 1279
BspLI GGNNCC 4 cut(s) 109, 1319, 1972, 2084
BspMI ACCTGC 1 cut(s) 1839
BspPI GGATC 3 cut(s) 1452, 1926, 1991
BspT104I TTCGAA 1 cut(s) 1599
BsrDI GCAATG 5 cut(s) 16, 107, 340, 523, 537
BsrI ACTGG 1 cut(s) 237
BssECI CCNNGG 2 cut(s) 1692, 1967
BssMI GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
BssT1I CCWWGG 1 cut(s) 1692
Bst2UI CCWGG 2 cut(s) 1725, 1968
Bst4CI ACNGT 4 cut(s) 368, 907, 1420, 2023
Bst6I CTCTTC 1 cut(s) 1254
BstAPI GCANNNNNTGC 1 cut(s) 773
BstBAI YACGTR 1 cut(s) 408
BstBI TTCGAA 1 cut(s) 1599
BstC8I GCNNGC 6 cut(s) 222, 331, 1354, 1546, 1550, 1572
BstDEI CTNAG 7 cut(s) 29, 209, 588, 1468, 1656, 1768, 1838
BstDSI CCRYGG 1 cut(s) 1692
BstF5I GGATG 2 cut(s) 78, 1675
BstFNI CGCG 1 cut(s) 1174
BstH2I RGCGCY 1 cut(s) 1468
BstHHI GCGC 1 cut(s) 1467
BstKTI GATC 5 cut(s) 38, 1050, 1447, 1921, 1986
BstMAI GTCTC 2 cut(s) 126, 144
BstMBI GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
BstMWI GCNNNNNNNGC 3 cut(s) 527, 773, 1353
BstNI CCWGG 2 cut(s) 1725, 1968
BstNSI RCATGY 4 cut(s) 1072, 1144, 1195, 1344
BstSCI CCNGG 2 cut(s) 1723, 1966
BstUI CGCG 1 cut(s) 1174
BstV1I GCAGC 3 cut(s) 57, 1516, 1715
BstX2I RGATCY 1 cut(s) 1444
BstYI RGATCY 1 cut(s) 1444
Bsu36I CCTNAGG 1 cut(s) 29
BsuI GTATCC 1 cut(s) 1844
BsuRI GGCC 4 cut(s) 153, 255, 1265, 1356
BtgI CCRYGG 1 cut(s) 1692
BtgZI GCGATG 2 cut(s) 963, 1678
BtsCI GGATG 2 cut(s) 78, 1675
BtsI GCAGTG 1 cut(s) 1522
BtsIMutI CAGTG 1 cut(s) 1522
BveI ACCTGC 1 cut(s) 1839
Cac8I GCNNGC 6 cut(s) 222, 331, 1354, 1546, 1550, 1572
CciI TCATGA 2 cut(s) 312, 1279
CfoI GCGC 1 cut(s) 1467
Cfr13I GGNCC 3 cut(s) 253, 1318, 1971
CseI GACGC 1 cut(s) 1163
Csp6I GTAC 3 cut(s) 364, 409, 535
CviQI GTAC 3 cut(s) 364, 409, 535
DdeI CTNAG 7 cut(s) 29, 209, 588, 1468, 1656, 1768, 1838
DpnI GATC 5 cut(s) 37, 1049, 1446, 1920, 1985
DpnII GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
DriI GACNNNNNGTC 1 cut(s) 907
Eam1104I CTCTTC 1 cut(s) 1254
Eam1105I GACNNNNNGTC 1 cut(s) 907
EarI CTCTTC 1 cut(s) 1254
EciI GGCGGA 2 cut(s) 905, 1589
Ecl136II GAGCTC 1 cut(s) 1244
Eco130I CCWWGG 1 cut(s) 1692
Eco147I AGGCCT 1 cut(s) 1356
Eco24I GRGCYC 1 cut(s) 1246
Eco47I GGWCC 2 cut(s) 1318, 1971
Eco53kI GAGCTC 1 cut(s) 1244
Eco57I CTGAAG 2 cut(s) 101, 1733
Eco81I CCTNAGG 1 cut(s) 29
Eco88I CYCGRG 2 cut(s) 1395, 2052
EcoICRI GAGCTC 1 cut(s) 1244
EcoO109I RGGNCCY 1 cut(s) 1318
EcoRI GAATTC 1 cut(s) 916
EcoRII CCWGG 2 cut(s) 1723, 1966
EcoT14I CCWWGG 1 cut(s) 1692
EcoT22I ATGCAT 1 cut(s) 955
EcoT38I GRGCYC 1 cut(s) 1246
ErhI CCWWGG 1 cut(s) 1692
FalI AAGNNNNNCTT 2 cut(s) 1150, 1182
FaqI GGGAC 3 cut(s) 718, 1722, 1984
FauNDI CATATG 1 cut(s) 1480
Fnu4HI GCNGC 4 cut(s) 46, 1530, 1653, 1729
FokI GGATG 2 cut(s) 65, 1682
FriOI GRGCYC 1 cut(s) 1246
Fsp4HI GCNGC 4 cut(s) 46, 1530, 1653, 1729
FspBI CTAG 2 cut(s) 194, 1358
GlaI GCGC 1 cut(s) 1466
GluI GCNGC 4 cut(s) 46, 1530, 1653, 1729
GsaI CCCAGC 3 cut(s) 265, 719, 1515
HaeII RGCGCY 1 cut(s) 1468
HaeIII GGCC 4 cut(s) 153, 255, 1265, 1356
HgaI GACGC 1 cut(s) 1163
HhaI GCGC 1 cut(s) 1467
Hin6I GCGC 1 cut(s) 1465
HinP1I GCGC 1 cut(s) 1465
HinfI GANTC 5 cut(s) 187, 350, 497, 1836, 1993
HphI GGTGA 8 cut(s) 118, 485, 749, 796, 809, 1708, 1978, 2129
Hpy188I TCNGA 1 cut(s) 648
Hpy99I CGWCG 1 cut(s) 1179
HpyAV CCTTC 4 cut(s) 97, 757, 986, 1699
HpyCH4III ACNGT 4 cut(s) 368, 907, 1420, 2023
HpyCH4IV ACGT 1 cut(s) 407
HpyF10VI GCNNNNNNNGC 3 cut(s) 527, 773, 1353
HpyF3I CTNAG 7 cut(s) 29, 209, 588, 1468, 1656, 1768, 1838
HpySE526I ACGT 1 cut(s) 407
HspAI GCGC 1 cut(s) 1465
Kzo9I GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
LmnI GCTCC 3 cut(s) 107, 218, 1241
Lsp1109I GCAGC 3 cut(s) 57, 1516, 1715
LweI GCATC 2 cut(s) 940, 1899
MaeI CTAG 2 cut(s) 194, 1358
MaeII ACGT 1 cut(s) 407
MaeIII GTNAC 7 cut(s) 245, 323, 1012, 1021, 1040, 1625, 2023
MalI GATC 5 cut(s) 37, 1049, 1446, 1920, 1985
MboI GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
MfeI CAATTG 1 cut(s) 1938
MflI RGATCY 1 cut(s) 1444
MhlI GDGCHC 1 cut(s) 1246
MlyI GAGTC 2 cut(s) 506, 1830
MmeI TCCRAC 2 cut(s) 327, 1828
Mph1103I ATGCAT 1 cut(s) 955
MroXI GAANNNNTTC 1 cut(s) 1595
MseI TTAA 8 cut(s) 288, 423, 965, 1092, 1383, 1491, 1817, 1956
MslI CAYNNNNRTG 3 cut(s) 777, 1736, 1871
MspA1I CMGCKG 2 cut(s) 265, 1655
MspR9I CCNGG 2 cut(s) 1725, 1968
MunI CAATTG 1 cut(s) 1938
Mva1269I GAATGC 1 cut(s) 588
MvaI CCWGG 2 cut(s) 1725, 1968
MvnI CGCG 1 cut(s) 1174
MwoI GCNNNNNNNGC 3 cut(s) 527, 773, 1353
NcoI CCATGG 1 cut(s) 1692
NdeI CATATG 1 cut(s) 1480
NdeII GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
NlaIV GGNNCC 4 cut(s) 109, 1319, 1972, 2084
NmeAIII GCCGAG 1 cut(s) 1431
NmuCI GTSAC 2 cut(s) 1021, 1040
NsiI ATGCAT 1 cut(s) 955
NspI RCATGY 4 cut(s) 1072, 1144, 1195, 1344
NspV TTCGAA 1 cut(s) 1599
OliI CACNNNNGTG 2 cut(s) 1736, 1871
PaeR7I CTCGAG 1 cut(s) 2052
PagI TCATGA 2 cut(s) 312, 1279
PceI AGGCCT 1 cut(s) 1356
PciI ACATGT 1 cut(s) 1140
PctI GAATGC 1 cut(s) 588
PdmI GAANNNNTTC 1 cut(s) 1595
PfeI GAWTC 3 cut(s) 187, 350, 1993
PkrI GCNGC 4 cut(s) 47, 1531, 1654, 1730
PleI GAGTC 2 cut(s) 505, 1830
PpsI GAGTC 2 cut(s) 505, 1830
Ppu21I YACGTR 1 cut(s) 408
PpuMI RGGWCCY 1 cut(s) 1318
PscI ACATGT 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 2063
Psp124BI GAGCTC 1 cut(s) 1246
Psp5II RGGWCCY 1 cut(s) 1318
Psp6I CCWGG 2 cut(s) 1723, 1966
PspFI CCCAGC 3 cut(s) 261, 715, 1511
PspGI CCWGG 2 cut(s) 1723, 1966
PspN4I GGNNCC 4 cut(s) 109, 1319, 1972, 2084
PspPI GGNCC 3 cut(s) 253, 1318, 1971
PspPPI RGGWCCY 1 cut(s) 1318
PsrI GAACNNNNNNTAC 2 cut(s) 557, 589
PsuI RGATCY 1 cut(s) 1444
PvuII CAGCTG 1 cut(s) 265
RsaI GTAC 3 cut(s) 365, 410, 536
RsaNI GTAC 3 cut(s) 364, 409, 535
RseI CAYNNNNRTG 3 cut(s) 777, 1736, 1871
SacI GAGCTC 1 cut(s) 1246
SaqAI TTAA 8 cut(s) 288, 423, 965, 1092, 1383, 1491, 1817, 1956
SatI GCNGC 4 cut(s) 46, 1530, 1653, 1729
Sau3AI GATC 5 cut(s) 35, 1047, 1444, 1918, 1983
Sau96I GGNCC 3 cut(s) 253, 1318, 1971
SchI GAGTC 2 cut(s) 506, 1830
ScrFI CCNGG 2 cut(s) 1725, 1968
SduI GDGCHC 1 cut(s) 1246
SfaNI GCATC 2 cut(s) 940, 1899
Sfr274I CTCGAG 1 cut(s) 2052
SfuI TTCGAA 1 cut(s) 1599
SinI GGWCC 2 cut(s) 1318, 1971
SlaI CTCGAG 1 cut(s) 2052
SmiMI CAYNNNNRTG 3 cut(s) 777, 1736, 1871
SmlI CTYRAG 1 cut(s) 2052
SmoI CTYRAG 1 cut(s) 2052
SseBI AGGCCT 1 cut(s) 1356
SsiI CCGC 7 cut(s) 54, 243, 662, 874, 890, 1574, 1653
SspMI CTAG 2 cut(s) 194, 1358
SstI GAGCTC 1 cut(s) 1246
StuI AGGCCT 1 cut(s) 1356
StyD4I CCNGG 2 cut(s) 1723, 1966
StyI CCWWGG 1 cut(s) 1692
TaaI ACNGT 4 cut(s) 368, 907, 1420, 2023
TaiI ACGT 1 cut(s) 410
TaqI TCGA 7 cut(s) 353, 500, 576, 869, 979, 1599, 2053
TatI WGTACW 1 cut(s) 534
TauI GCSGC 1 cut(s) 1655
TfiI GAWTC 3 cut(s) 187, 350, 1993
Tru1I TTAA 8 cut(s) 288, 423, 965, 1092, 1383, 1491, 1817, 1956
Tru9I TTAA 8 cut(s) 288, 423, 965, 1092, 1383, 1491, 1817, 1956
TscAI CASTG 1 cut(s) 1522
TseFI GTSAC 2 cut(s) 1021, 1040
TseI GCWGC 3 cut(s) 45, 1529, 1728
Tsp45I GTSAC 2 cut(s) 1021, 1040
TspRI CASTG 1 cut(s) 1522
VpaK11BI GGWCC 2 cut(s) 1318, 1971
XapI RAATTY 6 cut(s) 292, 307, 823, 916, 1204, 2042
XbaI TCTAGA 1 cut(s) 193
XceI RCATGY 4 cut(s) 1072, 1144, 1195, 1344
XcmI CCANNNNNNNNNTGG 2 cut(s) 1204, 2096
XhoI CTCGAG 1 cut(s) 2052
XmnI GAANNNNTTC 1 cut(s) 1595
XspI CTAG 2 cut(s) 194, 1358
Zsp2I ATGCAT 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.