RchiOBHm_Chr2g0127861

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0005195
Physical Location & Seq
Forward (+)
42681740 .. 42684657
2918 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49969

Sequence Viewer

Length: 1989 bp
ATGCAAAACCAAAACACTTTATTGCTGCGTACTCTAAACCACCACAGACGTCTCCTGCACTGCACACAATCCCAATCCCAACTCTTTCATAGACCAATTAGACCAAGCACATGCATATCGCTGATAAAGCAATGCAACACCCTTCAGTCCCTCAAAGCTGTCCATGCCTCTATCCTCAGAACCTACCTTCACTTCAATATCTTCTTTTGCACCAACCTCATTGCCCACTATGCCTCTTTGGGCTCAACCTCTCACGCCTATACCCTCTTCTCTGCCTTCTCTTCCTCTGACGTTTTTCTTTGGAATGTAATCATCAAAGGCTTTGTTGACAATGGCCTGTACAACAGAGCCATTGCTTTGTATAGTCAAATGTGGGAATTGGGTGTTGGTGTAAAGGTTCATGGAGATGTGATTCAATGTGGTTATGCTGCAGATTTGTTTGTAGGCAATTCACTCATTGCACTTTATGGTAAACTGGGGCAGATCGAGGCTGCAAGAAAGGTGTTTGATAAAATTCCTGACCGTACTGTGGTTTCCTGGAGTTCAATGATTGGCGCGTATGCGCAAAATGGGTATTTTGAGGAAGGATTATTTTTGTTTGTGATGATGTTGAATGACAGATTGAGACCCAACAGGGCTGCAATTTTGAATGTGATGGCTTGTGTTTTAAGAAGCAAGGAGGCTGATGAGATCTGTTCAAAATGCTGCAATGCAGATGTATGCACGCTGCGGAAGAATGATGTTGCTCGAGGTTTCTTTAATGGAATCATTGATAAAGACTTGGTGAGTTGGGCATCCATGATTGAAGCATATGCGCAAGTTAATTTGCCTCTTGAAGCCTTGGAGCTCTTTAAAAGTATGATGGTGCAAAGGATTCGCCCTGATTTGGTGGCACTTTTGAGTGTGATTCGCACTTGTTCAAATCTAGCATCATATAAGAAAGCACGCTGGATTCACGGAGTTGTTATTCGTTCCTTTTTTGGGCACCATGTCACGCTTGAAACTTCTCTAGTTGATCTATATGTAAAATGTGGAAGTTTGGTATATGCTAGAAAAGTTTTTGATAAGATGCAAGAAAGAAATATAATATCATGGAGCACCATGATTTCAGGATATGGGATGCATGGTCATGGAAGAGAAGCAGTCAACCTCTTTCATCAGATGAAGGCTCCAACAAAACCAGACCACGTTGCATTTCTATCAGTGTTGTCGGCATGCAGTCATGGTGGTTTGATTGCCGAAGGATGGGACTGCTTCAATTCTATGGGTCGGGATTTTCACATCATACCAAGACCCGAACATTATGCATGTATGAATGCCGGTAAGGCCAGATGCTGGTGTTTGGGAGCACTTCTCGGGGCATGTAGAATTCATTCAAACATAGAACTGGCAAAAACTGCTGCAAAGAATTTATTTGAATTGGATGCGGAGAACCCAGGTCGATATGTCCTCATGTCCAATATTTATGCATCTTCTGGTAAACAGAAGGATGCTGATAAAATTAGAGATTTAATGAAACAAAGAGGAGTGAGGAAGGTTGCTGGTCATACTAGTATAGAGATTAGAAACAAGGTCTACACATTTGTGGCTGGAGACAAGTCACATGCTCAATCTGATTTAATCTATTCAGAGTTGGAGAAAGTTATAAACAGGATTCGGCAAGAAGGTTACAAGCCGGATTTGAACTTTGTATTGCACGATGTGGAGGAAGAGATGAAGGAAACAATGTTGTATGTGCATAGTGAGAAGCTTGCAATAGTTTTTGGACTTTTAAATTCAGGACCAGGAAGTGTTATTAGAATTAATAAGAATCTTAGAGTCTGTGGGGATTGTCATACAGCTTCCAAGTTTATCTCTAAGGTTATGGGAAGGGAAATTGTAATGAGAGATGCTCATAGATTCCACCATTTCAATAATGGTGCATGCTCTTGTGGGATTATTGGTGACATTGTCATAGAAGGTCAATATCTGGTCCACAAACTCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

662

Amino Acids

74.43

Weight (kDa)

9.07

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 178 - 206 5.7e-06 PPR repeat
PPR_2 PF13041 360 - 407 3.5e-07 PPR repeat family
PPR PF01535 363 - 389 1.3e-06 PPR repeat
E_motif PF20431 458 - 520 7.5e-20 E motif
Eplus_motif PF20430 525 - 552 1.2e-07 E+ motif
DYW_deaminase PF14432 556 - 645 2e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1646
AatII GACGTC 1 cut(s) 52
Acc16I TGCGCA 2 cut(s) 564, 816
AccB1I GGYRCC 1 cut(s) 984
AccB7I CCANNNNNTGG 1 cut(s) 1335
AccI GTMKAC 1 cut(s) 1575
AccII CGCG 1 cut(s) 557
AciI CCGC 2 cut(s) 730, 1427
AcsI RAATTY 4 cut(s) 513, 1368, 1408, 1774
AcuI CTGAAG 1 cut(s) 128
AcyI GRCGYC 1 cut(s) 49
AdeI CACNNNGTG 1 cut(s) 1702
AfaI GTAC 3 cut(s) 31, 341, 526
AfiI CCNNNNNNNGG 5 cut(s) 529, 886, 981, 1245, 1335
AhlI ACTAGT 1 cut(s) 1550
AjnI CCWGG 3 cut(s) 536, 1435, 1783
AjuI GAANNNNNNNTTGG 2 cut(s) 369, 401
AleI CACNNNNGTG 1 cut(s) 1583
AluBI AGCT 4 cut(s) 158, 847, 1750, 1841
AluI AGCT 4 cut(s) 158, 847, 1750, 1841
Alw21I GWGCWC 3 cut(s) 849, 1100, 1351
Alw26I GTCTC 3 cut(s) 56, 619, 1587
AlwNI CAGNNNCTG 1 cut(s) 1335
Ama87I CYCGRG 2 cut(s) 747, 1355
AoxI GGCC 2 cut(s) 334, 1326
ApeKI GCWGC 7 cut(s) 25, 428, 491, 638, 705, 727, 1400
ApoI RAATTY 4 cut(s) 513, 1368, 1408, 1774
AseI ATTAAT 1 cut(s) 1803
Asp700I GAANNNNTTC 1 cut(s) 1372
AspLEI GCGC 3 cut(s) 557, 565, 817
AspS9I GGNCC 2 cut(s) 1781, 1972
AsuHPI GGTGA 2 cut(s) 796, 1955
AvaI CYCGRG 2 cut(s) 747, 1355
AvaII GGWCC 2 cut(s) 1781, 1972
BaeGI GKGCMC 1 cut(s) 987
BanI GGYRCC 1 cut(s) 984
BanII GRGCYC 2 cut(s) 245, 849
Bbv12I GWGCWC 3 cut(s) 849, 1100, 1351
BbvI GCAGC 7 cut(s) 12, 415, 478, 625, 692, 714, 1387
BccI CCATC 3 cut(s) 649, 856, 1239
BcgI CGANNNNNNTGC 4 cut(s) 857, 891, 1286, 1320
BciT130I CCWGG 3 cut(s) 538, 1437, 1785
BcoDI GTCTC 3 cut(s) 56, 619, 1587
BcuI ACTAGT 1 cut(s) 1550
BfaI CTAG 4 cut(s) 926, 1010, 1050, 1551
BfmI CTRYAG 1 cut(s) 429
BglI GCCNNNNNGGC 1 cut(s) 1325
BglII AGATCT 1 cut(s) 690
BisI GCNGC 7 cut(s) 26, 429, 492, 639, 706, 728, 1401
BlsI GCNGC 7 cut(s) 27, 430, 493, 640, 707, 729, 1402
Bme1390I CCNGG 3 cut(s) 538, 1437, 1785
Bme18I GGWCC 2 cut(s) 1781, 1972
BmeT110I CYCGRG 2 cut(s) 747, 1355
BmgT120I GGNCC 2 cut(s) 1781, 1972
BmiI GGNNCC 2 cut(s) 986, 1170
BmrFI CCNGG 3 cut(s) 538, 1437, 1785
BmrI ACTGGG 1 cut(s) 485
BmsI GCATC 9 cut(s) 803, 938, 1059, 1110, 1322, 1414, 1478, 1480, 1879
BmuI ACTGGG 1 cut(s) 485
BplI GAGNNNNNCTC 4 cut(s) 1338, 1370, 1876, 1908
BpmI CTGGAG 2 cut(s) 559, 1611
BsaHI GRCGYC 1 cut(s) 49
BsaI GGTCTC 1 cut(s) 619
BsaJI CCNNGG 2 cut(s) 840, 1435
Bsc4I CCNNNNNNNGG 5 cut(s) 529, 886, 981, 1245, 1335
Bse118I RCCGGY 1 cut(s) 1319
Bse1I ACTGG 2 cut(s) 480, 1392
Bse3DI GCAATG 5 cut(s) 137, 219, 351, 456, 715
BseBI CCWGG 3 cut(s) 538, 1437, 1785
BseDI CCNNGG 2 cut(s) 840, 1435
BseGI GGATG 5 cut(s) 794, 1125, 1250, 1429, 1495
BseLI CCNNNNNNNGG 5 cut(s) 529, 886, 981, 1245, 1335
BseMI GCAATG 5 cut(s) 137, 219, 351, 456, 715
BseMII CTCAG 1 cut(s) 190
BseNI ACTGG 2 cut(s) 480, 1392
BseRI GAGGAG 1 cut(s) 1539
BseSI GKGCMC 1 cut(s) 987
BseXI GCAGC 7 cut(s) 12, 415, 478, 625, 692, 714, 1387
BsgI GTGCAG 2 cut(s) 41, 46
Bsh1236I CGCG 1 cut(s) 557
BshFI GGCC 2 cut(s) 336, 1328
BshNI GGYRCC 1 cut(s) 984
BsiHKAI GWGCWC 3 cut(s) 849, 1100, 1351
BsiHKCI CYCGRG 2 cut(s) 747, 1355
BsiSI CCGG 2 cut(s) 1320, 1676
BslFI GGGAC 2 cut(s) 133, 1262
BslI CCNNNNNNNGG 5 cut(s) 529, 886, 981, 1245, 1335
BsmAI GTCTC 3 cut(s) 56, 619, 1587
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 2 cut(s) 133, 1262
BsmI GAATGC 1 cut(s) 1321
BsnI GGCC 2 cut(s) 336, 1328
Bso31I GGTCTC 1 cut(s) 619
BsoBI CYCGRG 2 cut(s) 747, 1355
Bsp1286I GDGCHC 5 cut(s) 245, 849, 987, 1100, 1351
Bsp1407I TGTACA 1 cut(s) 339
Bsp143I GATC 3 cut(s) 483, 690, 1015
BspACI CCGC 2 cut(s) 730, 1427
BspANI GGCC 2 cut(s) 336, 1328
BspCNI CTCAG 1 cut(s) 189
BspFNI CGCG 1 cut(s) 557
BspLI GGNNCC 2 cut(s) 986, 1170
BspMAI CTGCAG 1 cut(s) 433
BspT107I GGYRCC 1 cut(s) 984
BspTNI GGTCTC 1 cut(s) 619
BsrDI GCAATG 5 cut(s) 137, 219, 351, 456, 715
BsrFI RCCGGY 1 cut(s) 1319
BsrGI TGTACA 1 cut(s) 339
BsrI ACTGG 2 cut(s) 480, 1392
BssAI RCCGGY 1 cut(s) 1319
BssECI CCNNGG 2 cut(s) 840, 1435
BssMI GATC 3 cut(s) 483, 690, 1015
BssNI GRCGYC 1 cut(s) 49
BssT1I CCWWGG 1 cut(s) 840
Bst2UI CCWGG 3 cut(s) 538, 1437, 1785
Bst4CI ACNGT 2 cut(s) 524, 529
Bst6I CTCTTC 4 cut(s) 272, 286, 1129, 1704
BstACI GRCGYC 1 cut(s) 49
BstAPI GCANNNNNTGC 1 cut(s) 1397
BstAUI TGTACA 1 cut(s) 339
BstC8I GCNNGC 5 cut(s) 725, 946, 1216, 1752, 1924
BstDEI CTNAG 3 cut(s) 176, 1814, 1857
BstF5I GGATG 5 cut(s) 794, 1125, 1250, 1429, 1495
BstFNI CGCG 1 cut(s) 557
BstHHI GCGC 3 cut(s) 557, 565, 817
BstKTI GATC 3 cut(s) 486, 693, 1018
BstMAI GTCTC 3 cut(s) 56, 619, 1587
BstMBI GATC 3 cut(s) 483, 690, 1015
BstMWI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1325, 1397
BstNI CCWGG 3 cut(s) 538, 1437, 1785
BstNSI RCATGY 6 cut(s) 114, 1218, 1311, 1365, 1607, 1926
BstSCI CCNGG 3 cut(s) 536, 1435, 1783
BstSFI CTRYAG 1 cut(s) 429
BstSLI GKGCMC 1 cut(s) 987
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 7 cut(s) 12, 415, 478, 625, 692, 714, 1387
BstX2I RGATCY 1 cut(s) 690
BstYI RGATCY 1 cut(s) 690
BsuRI GGCC 2 cut(s) 336, 1328
BtsCI GGATG 5 cut(s) 794, 1125, 1250, 1429, 1495
BtsI GCAGTG 1 cut(s) 58
BtsIMutI CAGTG 2 cut(s) 58, 1209
Cac8I GCNNGC 5 cut(s) 725, 946, 1216, 1752, 1924
CaiI CAGNNNCTG 1 cut(s) 1335
CfoI GCGC 3 cut(s) 557, 565, 817
Cfr10I RCCGGY 1 cut(s) 1319
Cfr13I GGNCC 2 cut(s) 1781, 1972
Csp6I GTAC 3 cut(s) 30, 340, 525
CviQI GTAC 3 cut(s) 30, 340, 525
DdeI CTNAG 3 cut(s) 176, 1814, 1857
DpnI GATC 3 cut(s) 485, 692, 1017
DpnII GATC 3 cut(s) 483, 690, 1015
DraI TTTAAA 2 cut(s) 853, 1773
DraIII CACNNNGTG 1 cut(s) 1702
Eam1104I CTCTTC 4 cut(s) 272, 286, 1129, 1704
EarI CTCTTC 4 cut(s) 272, 286, 1129, 1704
Ecl136II GAGCTC 1 cut(s) 847
Eco130I CCWWGG 1 cut(s) 840
Eco24I GRGCYC 2 cut(s) 245, 849
Eco31I GGTCTC 1 cut(s) 619
Eco47I GGWCC 2 cut(s) 1781, 1972
Eco53kI GAGCTC 1 cut(s) 847
Eco57I CTGAAG 1 cut(s) 128
Eco88I CYCGRG 2 cut(s) 747, 1355
EcoICRI GAGCTC 1 cut(s) 847
EcoRI GAATTC 1 cut(s) 1368
EcoRII CCWGG 3 cut(s) 536, 1435, 1783
EcoT14I CCWWGG 1 cut(s) 840
EcoT22I ATGCAT 4 cut(s) 116, 1125, 1309, 1471
EcoT38I GRGCYC 2 cut(s) 245, 849
ErhI CCWWGG 1 cut(s) 840
Esp3I CGTCTC 1 cut(s) 56
FaqI GGGAC 2 cut(s) 133, 1262
FauNDI CATATG 1 cut(s) 811
FblI GTMKAC 1 cut(s) 1575
Fnu4HI GCNGC 7 cut(s) 26, 429, 492, 639, 706, 728, 1401
FokI GGATG 5 cut(s) 781, 1132, 1257, 1436, 1502
FriOI GRGCYC 2 cut(s) 245, 849
Fsp4HI GCNGC 7 cut(s) 26, 429, 492, 639, 706, 728, 1401
FspBI CTAG 4 cut(s) 926, 1010, 1050, 1551
FspI TGCGCA 2 cut(s) 564, 816
GlaI GCGC 3 cut(s) 556, 564, 816
GluI GCNGC 7 cut(s) 26, 429, 492, 639, 706, 728, 1401
GsuI CTGGAG 2 cut(s) 559, 1611
HaeIII GGCC 2 cut(s) 336, 1328
HapII CCGG 2 cut(s) 1320, 1676
HhaI GCGC 3 cut(s) 557, 565, 817
Hin1I GRCGYC 1 cut(s) 49
Hin6I GCGC 3 cut(s) 555, 563, 815
HinP1I GCGC 3 cut(s) 555, 563, 815
HincII GTYRAC 2 cut(s) 328, 1147
HindII GTYRAC 2 cut(s) 328, 1147
HindIII AAGCTT 1 cut(s) 1748
HinfI GANTC 9 cut(s) 412, 765, 874, 907, 952, 1654, 1810, 1818, 1899
HpaII CCGG 2 cut(s) 1320, 1676
HphI GGTGA 2 cut(s) 796, 1955
Hpy166II GTNNAC 6 cut(s) 328, 473, 1147, 1481, 1576, 1975
Hpy188I TCNGA 5 cut(s) 179, 289, 1161, 1615, 1630
Hpy188III TCNNGA 5 cut(s) 518, 833, 1110, 1271, 1779
Hpy8I GTNNAC 6 cut(s) 328, 473, 1147, 1481, 1576, 1975
HpyCH4III ACNGT 2 cut(s) 524, 529
HpyCH4IV ACGT 3 cut(s) 49, 291, 1188
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1325, 1397
HpyF3I CTNAG 3 cut(s) 176, 1814, 1857
HpySE526I ACGT 3 cut(s) 49, 291, 1188
Hsp92I GRCGYC 1 cut(s) 49
HspAI GCGC 3 cut(s) 555, 563, 815
Kzo9I GATC 3 cut(s) 483, 690, 1015
LmnI GCTCC 4 cut(s) 844, 1095, 1174, 1346
Lsp1109I GCAGC 7 cut(s) 12, 415, 478, 625, 692, 714, 1387
LweI GCATC 9 cut(s) 803, 938, 1059, 1110, 1322, 1414, 1478, 1480, 1879
MaeI CTAG 4 cut(s) 926, 1010, 1050, 1551
MaeII ACGT 3 cut(s) 49, 291, 1188
MaeIII GTNAC 4 cut(s) 991, 1599, 1667, 1943
MalI GATC 3 cut(s) 485, 692, 1017
MboI GATC 3 cut(s) 483, 690, 1015
MboII GAAGA 7 cut(s) 193, 259, 273, 745, 1146, 1464, 1721
MflI RGATCY 1 cut(s) 690
MhlI GDGCHC 5 cut(s) 245, 849, 987, 1100, 1351
MlyI GAGTC 1 cut(s) 1827
MmeI TCCRAC 2 cut(s) 1196, 1614
Mph1103I ATGCAT 4 cut(s) 116, 1125, 1309, 1471
MroXI GAANNNNTTC 1 cut(s) 1372
MseI TTAA 8 cut(s) 668, 759, 822, 852, 1511, 1619, 1772, 1803
MslI CAYNNNNRTG 3 cut(s) 405, 1128, 1583
MspI CCGG 2 cut(s) 1320, 1676
MspR9I CCNGG 3 cut(s) 538, 1437, 1785
Mva1269I GAATGC 1 cut(s) 1321
MvaI CCWGG 3 cut(s) 538, 1437, 1785
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 5 cut(s) 127, 164, 230, 1325, 1397
NdeI CATATG 1 cut(s) 811
NdeII GATC 3 cut(s) 483, 690, 1015
NlaIV GGNNCC 2 cut(s) 986, 1170
NmuCI GTSAC 3 cut(s) 991, 1599, 1943
NsbI TGCGCA 2 cut(s) 564, 816
NsiI ATGCAT 4 cut(s) 116, 1125, 1309, 1471
NspI RCATGY 6 cut(s) 114, 1218, 1311, 1365, 1607, 1926
OliI CACNNNNGTG 1 cut(s) 1583
PaeI GCATGC 2 cut(s) 1218, 1926
PaeR7I CTCGAG 1 cut(s) 747
PctI GAATGC 1 cut(s) 1321
PdmI GAANNNNTTC 1 cut(s) 1372
PfeI GAWTC 8 cut(s) 412, 765, 874, 907, 952, 1654, 1810, 1899
PflFI GACNNNGTC 1 cut(s) 1949
PflMI CCANNNNNTGG 1 cut(s) 1335
PfoI TCCNGGA 1 cut(s) 536
PkrI GCNGC 7 cut(s) 27, 430, 493, 640, 707, 729, 1402
PleI GAGTC 1 cut(s) 1826
PpsI GAGTC 1 cut(s) 1826
PshBI ATTAAT 1 cut(s) 1803
PsiI TTATAA 1 cut(s) 1646
Psp124BI GAGCTC 1 cut(s) 849
Psp6I CCWGG 3 cut(s) 536, 1435, 1783
PspGI CCWGG 3 cut(s) 536, 1435, 1783
PspN4I GGNNCC 2 cut(s) 986, 1170
PspPI GGNCC 2 cut(s) 1781, 1972
PspXI VCTCGAGB 1 cut(s) 747
PstI CTGCAG 1 cut(s) 433
PstNI CAGNNNCTG 1 cut(s) 1335
PsuI RGATCY 1 cut(s) 690
PsyI GACNNNGTC 1 cut(s) 1949
RsaI GTAC 3 cut(s) 31, 341, 526
RsaNI GTAC 3 cut(s) 30, 340, 525
RseI CAYNNNNRTG 3 cut(s) 405, 1128, 1583
SacI GAGCTC 1 cut(s) 849
SaqAI TTAA 8 cut(s) 668, 759, 822, 852, 1511, 1619, 1772, 1803
SatI GCNGC 7 cut(s) 26, 429, 492, 639, 706, 728, 1401
Sau3AI GATC 3 cut(s) 483, 690, 1015
Sau96I GGNCC 2 cut(s) 1781, 1972
SchI GAGTC 1 cut(s) 1827
ScrFI CCNGG 3 cut(s) 538, 1437, 1785
SduI GDGCHC 5 cut(s) 245, 849, 987, 1100, 1351
SfaNI GCATC 9 cut(s) 803, 938, 1059, 1110, 1322, 1414, 1478, 1480, 1879
SfcI CTRYAG 1 cut(s) 429
Sfr274I CTCGAG 1 cut(s) 747
SinI GGWCC 2 cut(s) 1781, 1972
SlaI CTCGAG 1 cut(s) 747
SmiMI CAYNNNNRTG 3 cut(s) 405, 1128, 1583
SmlI CTYRAG 1 cut(s) 747
SmoI CTYRAG 1 cut(s) 747
SpeI ACTAGT 1 cut(s) 1550
SphI GCATGC 2 cut(s) 1218, 1926
SsiI CCGC 2 cut(s) 730, 1427
SspI AATATT 1 cut(s) 1462
SspMI CTAG 4 cut(s) 926, 1010, 1050, 1551
SstI GAGCTC 1 cut(s) 849
StyD4I CCNGG 3 cut(s) 536, 1435, 1783
StyI CCWWGG 1 cut(s) 840
TaaI ACNGT 2 cut(s) 524, 529
TaiI ACGT 3 cut(s) 52, 294, 1191
TaqI TCGA 3 cut(s) 486, 748, 1441
TatI WGTACW 1 cut(s) 339
TfiI GAWTC 8 cut(s) 412, 765, 874, 907, 952, 1654, 1810, 1899
Tru1I TTAA 8 cut(s) 668, 759, 822, 852, 1511, 1619, 1772, 1803
Tru9I TTAA 8 cut(s) 668, 759, 822, 852, 1511, 1619, 1772, 1803
TscAI CASTG 2 cut(s) 65, 1209
TseFI GTSAC 3 cut(s) 991, 1599, 1943
TseI GCWGC 7 cut(s) 25, 428, 491, 638, 705, 727, 1400
Tsp45I GTSAC 3 cut(s) 991, 1599, 1943
TspDTI ATGAA 8 cut(s) 77, 389, 1145, 1178, 1328, 1361, 1529, 1730
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 2 cut(s) 65, 1209
Tth111I GACNNNGTC 1 cut(s) 1949
Van91I CCANNNNNTGG 1 cut(s) 1335
VpaK11BI GGWCC 2 cut(s) 1781, 1972
VspI ATTAAT 1 cut(s) 1803
XapI RAATTY 4 cut(s) 513, 1368, 1408, 1774
XceI RCATGY 6 cut(s) 114, 1218, 1311, 1365, 1607, 1926
XcmI CCANNNNNNNNNTGG 1 cut(s) 1913
XhoI CTCGAG 1 cut(s) 747
XmiI GTMKAC 1 cut(s) 1575
XmnI GAANNNNTTC 1 cut(s) 1372
XspI CTAG 4 cut(s) 926, 1010, 1050, 1551
ZraI GACGTC 1 cut(s) 50
Zsp2I ATGCAT 4 cut(s) 116, 1125, 1309, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.