MD04G1244800.v1.1

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0005195
Physical Location & Seq
Reverse (-)
32072774 .. 32074783
2010 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1244800.v1.1.491

Sequence Viewer

Length: 2010 bp
ATGATAATCTCCCTGATTAAGCAATGCAACACCCTTTCGTCCCTCAAAGCCGTACACGCCGCCGTCCTCAGAACCCACGACCTCCACCTCAACCTCTTCCTCTGCACCAACCTTATCGCCCACTACGCCTCTCTGGGCTCCCCCTCTCACGCTTACATCCTCTTCTCCGCCGTCTCCTCCGCCTCCGACGTCTTCCTCTGGAATGTCATGATCAGAGGCTTCGTCGACAATGGCCTCTATAACAAAGCCATTGCTCTGTACAGTAAAATGTGGGACGTGGGTGTTAGACCCGATCATTTTACTTTCCCTTTTGTGATTAAGGCTTGTGGGTTTGCTCGTAATTGGAGATTGGGTAAGAAGGTTCATGGAGATGTGATTGAATGTGGGTATGCATTAGATGTGTTTGTAGGTAATTCACTAATTGGGTTGTATGGGAAATTTGGGCAGGTTGAAACTGCACGGAAGGTGTTTTATAAAATTCCCCAGAGAAATGTGGTTTCTTGGAGTTCGATGATTGGGGTGTACGCGCAAAATGGGTGCTTTGAGGATGGGTGGGAATTTTTTTTAATGATGTTGAATGAGAAAATTACACCCAACAGGGCTTCCGTTTTGAACGCGATGGCATGTGTTTTTCAAGAGAATGATGCTGGTGAGGTTTGTGGAGTTGTGACCGATAATGGACTTGATTTGGACCGCTCAGTTCAAAATGCTGCAATGCAAATGTATGCACGGTGCGGAAGAATGGATATTGCTCAGGTGTTTTTTGATAGGATCAGTGATAAGGACTTGGTGTCTTGGTCATCCATGATCGAAGCATATGCGCAAGCTGATTTGCCTCTTGAAGCTGTTGAGCTATTTAAAGAGATGAAAGAGCAAGGGGTTCTCCCTGATTTAGTGGCACTTCTAAGTGTTGTTGGCGCTTGTTCAAGTTTAGCATCGTTTCAGCAAGCACGTTGGATTCATGGACTTGTTATTCGTAGCTTTTTCAGCAATTGCATTGCGCTTGAAACTTCTATAGTTGATCTATATGTTAAATGCGGAAGTTTGATGTATGCTAGAAGGGTTTTTGATGAGATGCAAGAAAGAAATATAATCTCGTGGAGCACCATGATTTCAGGATATGGGATGCACGGTCATGGAAGAGAAGCAGTTAACCTCTTTCATCAGATGAAGGCTCTTATAATACCAGACCACATTGCGTTTCTATCAGTGCTGTCAGCCTGTAGTCATGGCGGGTTGATTGCCGAGGGATGGGACTGCTTTAATTCCATGAGTAGGGATTTTCATGTCACACCAAGGCCCGAACATTATGCATGTATGGTTGATCTTTTGGGACGATCTGGTCGACTGGATGAAGCCTTTGAGTTCATTGAGAGAATGCCGGTAAGGCCAGATGCTGGTGTATGGGGATCACTTCTCGGAGCATGCAGAATTCATTCAAATACAGAACTGGCTAAAATTGCAGCCGGACATTTATTCGAATTGGATGCAGAGAACCCAGGGCGATATGTTCTAATGTCCAATATTTATGCATCTTCTGGGAAACAGAAAGATGCTGATGATATTAGAGATTTGATGAAACAAAGAGGGGTGAGGAAAGTGGCTGGTCACACCAGTATAGAGATTAAGAACAAGGTCTACACGTTTGTGGCGGGTGATCATTCGCATGCTCAATCGGATTTGATCTATATGGAGCTGGAGAAATTGATAAACAGGATTCGACAAGAAGGGTACAATCCGGATTTGAACTTTGTGCTGCATGATGTGGAGGACGAGATGAAGGAGAAAATGTTGTATGCGCATAGTGAGAAGCTTGCAATAGTTTTCGGACTGTTGAATTTAGGACCGGAAAGTGTGATCAGAATAAAGAAGAATCTGAGAGTTTGTGGGGATTGTCATACAGCTTCCAAGTTTATCTCCAAGGTAACAGGAAGGGAAATTGTAATGAGAGATGCTCATAGATTCCATCATTTCAAGGATGGTGCATGTTCTTGTGGGGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

670

Amino Acids

75.07

Weight (kDa)

6.51

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 63 - 109 2.7e-10 PPR repeat family
PPR_2 PF13041 262 - 300 1.5e-07 PPR repeat family
PPR PF01535 264 - 294 7.1e-09 PPR repeat
PPR_2 PF13041 362 - 409 1.2e-06 PPR repeat family
PPR PF01535 365 - 391 1e-06 PPR repeat
E_motif PF20431 479 - 541 1.3e-18 E motif
Eplus_motif PF20430 546 - 573 3.1e-06 E+ motif
DYW_deaminase PF14432 577 - 669 8.6e-44 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 474, 1181
AasI GACNNNNNNGTC 1 cut(s) 1341
AatII GACGTC 1 cut(s) 192
Acc16I TGCGCA 2 cut(s) 822, 1800
Acc36I ACCTGC 1 cut(s) 436
AccB7I CCANNNNNTGG 1 cut(s) 1397
AccBSI CCGCTC 1 cut(s) 696
AccI GTMKAC 3 cut(s) 225, 1345, 1638
AccII CGCG 2 cut(s) 527, 617
AccIII TCCGGA 1 cut(s) 1738
AciI CCGC 8 cut(s) 60, 168, 180, 694, 735, 1038, 1233, 1652
AclWI GGATC 2 cut(s) 779, 1417
AcsI RAATTY 5 cut(s) 437, 477, 557, 1431, 1837
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 4 cut(s) 54, 260, 524, 1733
AfiI CCNNNNNNNGG 3 cut(s) 1251, 1275, 1397
AflIII ACRYGT 1 cut(s) 1641
AhdI GACNNNNNGTC 1 cut(s) 790
AjiI CACGTC 1 cut(s) 277
AjnI CCWGG 1 cut(s) 1498
AleI CACNNNNGTG 1 cut(s) 1646
AluBI AGCT 7 cut(s) 827, 845, 853, 981, 1696, 1813, 1904
AluI AGCT 7 cut(s) 827, 845, 853, 981, 1696, 1813, 1904
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 2 cut(s) 779, 1417
AlwNI CAGNNNCTG 1 cut(s) 1397
Aor13HI TCCGGA 1 cut(s) 1738
AoxI GGCC 3 cut(s) 232, 1298, 1388
ApeKI GCWGC 3 cut(s) 710, 1463, 1756
ApoI RAATTY 5 cut(s) 437, 477, 557, 1431, 1837
ArsI GACNNNNNNTTYG 2 cut(s) 957, 989
Asp700I GAANNNNTTC 1 cut(s) 1435
AspLEI GCGC 5 cut(s) 529, 823, 920, 1003, 1801
AspS9I GGNCC 3 cut(s) 691, 1299, 1844
AsuHPI GGTGA 3 cut(s) 662, 1603, 1667
AsuII TTCGAA 1 cut(s) 1479
AvaII GGWCC 2 cut(s) 691, 1844
BanII GRGCYC 1 cut(s) 140
BauI CACGAG 1 cut(s) 1096
BbsI GAAGAC 1 cut(s) 184
Bbv12I GWGCWC 1 cut(s) 1106
BbvI GCAGC 3 cut(s) 697, 1475, 1743
BccI CCATC 5 cut(s) 542, 613, 1245, 1973, 1974
BceAI ACGGC 3 cut(s) 35, 47, 155
BcgI CGANNNNNNTGC 6 cut(s) 800, 834, 1292, 1326, 1469, 1503
BciT130I CCWGG 1 cut(s) 1500
BclI TGATCA 3 cut(s) 210, 1657, 1857
BcoDI GTCTC 1 cut(s) 178
BfaI CTAG 1 cut(s) 1056
BfmI CTRYAG 2 cut(s) 1014, 1222
BfoI RGCGCY 1 cut(s) 921
BfuAI ACCTGC 1 cut(s) 436
BglI GCCNNNNNGGC 1 cut(s) 1387
BisI GCNGC 4 cut(s) 60, 711, 1464, 1757
BlsI GCNGC 4 cut(s) 61, 712, 1465, 1758
Bme1390I CCNGG 1 cut(s) 1500
Bme18I GGWCC 2 cut(s) 691, 1844
BmeRI GACNNNNNGTC 1 cut(s) 790
BmgBI CACGTC 1 cut(s) 277
BmgT120I GGNCC 3 cut(s) 691, 1299, 1844
BmiI GGNNCC 1 cut(s) 139
BmrFI CCNGG 1 cut(s) 1500
BmsI GCATC 9 cut(s) 634, 944, 1065, 1116, 1384, 1477, 1541, 1543, 1942
BpiI GAAGAC 1 cut(s) 184
BplI GAGNNNNNCTC 2 cut(s) 1939, 1971
BpmI CTGGAG 1 cut(s) 1718
Bpu10I CCTNAGC 1 cut(s) 753
Bpu14I TTCGAA 1 cut(s) 1479
BsaHI GRCGYC 1 cut(s) 189
BsaJI CCNNGG 5 cut(s) 1245, 1295, 1498, 1499, 1920
BsaWI WCCGGW 2 cut(s) 1738, 1846
BsaXI ACNNNNNCTCC 4 cut(s) 337, 367, 1775, 1805
Bsc4I CCNNNNNNNGG 3 cut(s) 1251, 1275, 1397
Bse118I RCCGGY 1 cut(s) 1381
Bse1I ACTGG 3 cut(s) 1353, 1455, 1614
Bse3DI GCAATG 5 cut(s) 29, 249, 720, 996, 1194
BseAI TCCGGA 1 cut(s) 1738
BseBI CCWGG 1 cut(s) 1500
BseDI CCNNGG 5 cut(s) 1245, 1295, 1498, 1499, 1920
BseGI GGATG 8 cut(s) 156, 553, 800, 1131, 1256, 1357, 1492, 1984
BseLI CCNNNNNNNGG 3 cut(s) 1251, 1275, 1397
BseMI GCAATG 5 cut(s) 29, 249, 720, 996, 1194
BseMII CTCAG 4 cut(s) 82, 711, 767, 1868
BseNI ACTGG 3 cut(s) 1353, 1455, 1614
BseRI GAGGAG 1 cut(s) 166
BseXI GCAGC 3 cut(s) 697, 1475, 1743
BsgI GTGCAG 2 cut(s) 88, 441
Bsh1236I CGCG 2 cut(s) 527, 617
BshFI GGCC 3 cut(s) 234, 1300, 1390
BsiHKAI GWGCWC 1 cut(s) 1106
BsiSI CCGG 4 cut(s) 1382, 1467, 1739, 1847
BslFI GGGAC 4 cut(s) 25, 287, 1268, 1347
BslI CCNNNNNNNGG 3 cut(s) 1251, 1275, 1397
BsmAI GTCTC 1 cut(s) 178
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 4 cut(s) 25, 287, 1268, 1347
BsmI GAATGC 1 cut(s) 1383
BsnI GGCC 3 cut(s) 234, 1300, 1390
Bsp119I TTCGAA 1 cut(s) 1479
Bsp1286I GDGCHC 2 cut(s) 140, 1106
Bsp13I TCCGGA 1 cut(s) 1738
Bsp1407I TGTACA 1 cut(s) 258
BspACI CCGC 8 cut(s) 60, 168, 180, 694, 735, 1038, 1233, 1652
BspANI GGCC 3 cut(s) 234, 1300, 1390
BspCNI CTCAG 4 cut(s) 81, 710, 766, 1869
BspEI TCCGGA 1 cut(s) 1738
BspFNI CGCG 2 cut(s) 527, 617
BspHI TCATGA 1 cut(s) 207
BspLI GGNNCC 1 cut(s) 139
BspMI ACCTGC 1 cut(s) 436
BspPI GGATC 2 cut(s) 779, 1417
BspT104I TTCGAA 1 cut(s) 1479
BsrBI CCGCTC 1 cut(s) 696
BsrDI GCAATG 5 cut(s) 29, 249, 720, 996, 1194
BsrFI RCCGGY 1 cut(s) 1381
BsrGI TGTACA 1 cut(s) 258
BsrI ACTGG 3 cut(s) 1353, 1455, 1614
BssAI RCCGGY 1 cut(s) 1381
BssECI CCNNGG 5 cut(s) 1245, 1295, 1498, 1499, 1920
BssNI GRCGYC 1 cut(s) 189
BssSI CACGAG 1 cut(s) 1096
BssT1I CCWWGG 2 cut(s) 1295, 1920
Bst2BI CACGAG 1 cut(s) 1096
Bst2UI CCWGG 1 cut(s) 1500
Bst4CI ACNGT 4 cut(s) 263, 732, 1133, 1833
Bst6I CTCTTC 3 cut(s) 101, 167, 1135
BstACI GRCGYC 1 cut(s) 189
BstAUI TGTACA 1 cut(s) 258
BstBI TTCGAA 1 cut(s) 1479
BstC8I GCNNGC 5 cut(s) 825, 948, 1426, 1668, 1815
BstDEI CTNAG 5 cut(s) 68, 697, 753, 905, 1877
BstF5I GGATG 8 cut(s) 156, 553, 800, 1131, 1256, 1357, 1492, 1984
BstFNI CGCG 2 cut(s) 527, 617
BstH2I RGCGCY 1 cut(s) 921
BstHHI GCGC 5 cut(s) 529, 823, 920, 1003, 1801
BstMAI GTCTC 1 cut(s) 178
BstMWI GCNNNNNNNGC 5 cut(s) 56, 125, 987, 1387, 1460
BstNI CCWGG 1 cut(s) 1500
BstNSI RCATGY 5 cut(s) 627, 1317, 1428, 1670, 1989
BstSCI CCNGG 1 cut(s) 1498
BstSFI CTRYAG 2 cut(s) 1014, 1222
BstUI CGCG 2 cut(s) 527, 617
BstV1I GCAGC 3 cut(s) 697, 1475, 1743
BstV2I GAAGAC 1 cut(s) 184
BsuRI GGCC 3 cut(s) 234, 1300, 1390
BtgZI GCGATG 1 cut(s) 632
BtrI CACGTC 1 cut(s) 277
BtsCI GGATG 8 cut(s) 156, 553, 800, 1131, 1256, 1357, 1492, 1984
BtsIMutI CAGTG 2 cut(s) 781, 1215
BveI ACCTGC 1 cut(s) 436
Cac8I GCNNGC 5 cut(s) 825, 948, 1426, 1668, 1815
CaiI CAGNNNCTG 1 cut(s) 1397
CciI TCATGA 1 cut(s) 207
CfoI GCGC 5 cut(s) 529, 823, 920, 1003, 1801
Cfr10I RCCGGY 1 cut(s) 1381
Cfr13I GGNCC 3 cut(s) 691, 1299, 1844
Csp6I GTAC 4 cut(s) 53, 259, 523, 1732
CviQI GTAC 4 cut(s) 53, 259, 523, 1732
DdeI CTNAG 5 cut(s) 68, 697, 753, 905, 1877
DraI TTTAAA 1 cut(s) 859
DrdI GACNNNNNNGTC 1 cut(s) 1341
DriI GACNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 1341
Eam1104I CTCTTC 3 cut(s) 101, 167, 1135
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 3 cut(s) 101, 167, 1135
EciI GGCGGA 2 cut(s) 157, 169
Eco130I CCWWGG 2 cut(s) 1295, 1920
Eco24I GRGCYC 1 cut(s) 140
Eco47I GGWCC 2 cut(s) 691, 1844
EcoRI GAATTC 1 cut(s) 1431
EcoRII CCWGG 1 cut(s) 1498
EcoT14I CCWWGG 2 cut(s) 1295, 1920
EcoT22I ATGCAT 3 cut(s) 394, 1315, 1534
EcoT38I GRGCYC 1 cut(s) 140
ErhI CCWWGG 2 cut(s) 1295, 1920
Esp3I CGTCTC 1 cut(s) 178
FaqI GGGAC 4 cut(s) 25, 287, 1268, 1347
FauI CCCGC 2 cut(s) 1226, 1645
FauNDI CATATG 1 cut(s) 817
FbaI TGATCA 3 cut(s) 210, 1657, 1857
FblI GTMKAC 3 cut(s) 225, 1345, 1638
Fnu4HI GCNGC 4 cut(s) 60, 711, 1464, 1757
FokI GGATG 8 cut(s) 143, 560, 787, 1138, 1263, 1364, 1499, 1991
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 4 cut(s) 60, 711, 1464, 1757
FspAI RTGCGCAY 1 cut(s) 1800
FspBI CTAG 1 cut(s) 1056
FspI TGCGCA 2 cut(s) 822, 1800
GlaI GCGC 5 cut(s) 528, 822, 919, 1002, 1800
GluI GCNGC 4 cut(s) 60, 711, 1464, 1757
GsuI CTGGAG 1 cut(s) 1718
HaeII RGCGCY 1 cut(s) 921
HaeIII GGCC 3 cut(s) 234, 1300, 1390
HapII CCGG 4 cut(s) 1382, 1467, 1739, 1847
HhaI GCGC 5 cut(s) 529, 823, 920, 1003, 1801
Hin1I GRCGYC 1 cut(s) 189
Hin6I GCGC 5 cut(s) 527, 821, 918, 1001, 1799
HinP1I GCGC 5 cut(s) 527, 821, 918, 1001, 1799
HincII GTYRAC 3 cut(s) 226, 1153, 1346
HindII GTYRAC 3 cut(s) 226, 1153, 1346
HindIII AAGCTT 1 cut(s) 1811
HinfI GANTC 4 cut(s) 958, 1717, 1873, 1962
HpaI GTTAAC 1 cut(s) 1153
HpaII CCGG 4 cut(s) 1382, 1467, 1739, 1847
HphI GGTGA 3 cut(s) 662, 1603, 1667
Hpy166II GTNNAC 6 cut(s) 55, 226, 523, 1153, 1346, 1639
Hpy188I TCNGA 9 cut(s) 71, 187, 215, 1167, 1421, 1678, 1829, 1862, 1878
Hpy188III TCNNGA 6 cut(s) 199, 208, 635, 839, 1116, 1739
Hpy8I GTNNAC 6 cut(s) 55, 226, 523, 1153, 1346, 1639
Hpy99I CGWCG 2 cut(s) 191, 227
HpyAV CCTTC 7 cut(s) 352, 457, 1053, 1165, 1721, 1774, 1926
HpyCH4III ACNGT 4 cut(s) 263, 732, 1133, 1833
HpyCH4IV ACGT 4 cut(s) 189, 276, 952, 1643
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 125, 987, 1387, 1460
HpyF3I CTNAG 5 cut(s) 68, 697, 753, 905, 1877
HpySE526I ACGT 4 cut(s) 189, 276, 952, 1643
Hsp92I GRCGYC 1 cut(s) 189
HspAI GCGC 5 cut(s) 527, 821, 918, 1001, 1799
Kpn2I TCCGGA 1 cut(s) 1738
Ksp22I TGATCA 3 cut(s) 210, 1657, 1857
KspAI GTTAAC 1 cut(s) 1153
LmnI GCTCC 4 cut(s) 143, 1101, 1421, 1693
Lsp1109I GCAGC 3 cut(s) 697, 1475, 1743
LweI GCATC 9 cut(s) 634, 944, 1065, 1116, 1384, 1477, 1541, 1543, 1942
MaeI CTAG 1 cut(s) 1056
MaeII ACGT 4 cut(s) 189, 276, 952, 1643
MaeIII GTNAC 4 cut(s) 667, 1288, 1607, 1924
MbiI CCGCTC 1 cut(s) 696
MboII GAAGA 7 cut(s) 88, 154, 184, 750, 1152, 1527, 1882
MfeI CAATTG 1 cut(s) 991
MhlI GDGCHC 2 cut(s) 140, 1106
MmeI TCCRAC 2 cut(s) 210, 935
Mph1103I ATGCAT 3 cut(s) 394, 1315, 1534
MroI TCCGGA 1 cut(s) 1738
MroXI GAANNNNTTC 1 cut(s) 1435
MseI TTAA 8 cut(s) 18, 318, 566, 858, 1032, 1152, 1263, 1626
MslI CAYNNNNRTG 4 cut(s) 369, 1134, 1646, 1665
MspI CCGG 4 cut(s) 1382, 1467, 1739, 1847
MspR9I CCNGG 1 cut(s) 1500
MunI CAATTG 1 cut(s) 991
Mva1269I GAATGC 1 cut(s) 1383
MvaI CCWGG 1 cut(s) 1500
MvnI CGCG 2 cut(s) 527, 617
MwoI GCNNNNNNNGC 5 cut(s) 56, 125, 987, 1387, 1460
NdeI CATATG 1 cut(s) 817
NlaIV GGNNCC 1 cut(s) 139
NmeAIII GCCGAG 1 cut(s) 1270
NmuCI GTSAC 3 cut(s) 667, 1288, 1607
NsbI TGCGCA 2 cut(s) 822, 1800
NsiI ATGCAT 3 cut(s) 394, 1315, 1534
NspI RCATGY 5 cut(s) 627, 1317, 1428, 1670, 1989
NspV TTCGAA 1 cut(s) 1479
OliI CACNNNNGTG 1 cut(s) 1646
PaeI GCATGC 2 cut(s) 1428, 1670
PagI TCATGA 1 cut(s) 207
PasI CCCWGGG 1 cut(s) 1499
PcsI WCGNNNNNNNCGW 1 cut(s) 1342
PctI GAATGC 1 cut(s) 1383
PdmI GAANNNNTTC 1 cut(s) 1435
PfeI GAWTC 4 cut(s) 958, 1717, 1873, 1962
PflMI CCANNNNNTGG 1 cut(s) 1397
PkrI GCNGC 4 cut(s) 61, 712, 1465, 1758
PsiI TTATAA 2 cut(s) 474, 1181
Psp6I CCWGG 1 cut(s) 1498
PspGI CCWGG 1 cut(s) 1498
PspN4I GGNNCC 1 cut(s) 139
PspPI GGNCC 3 cut(s) 691, 1299, 1844
PsrI GAACNNNNNNTAC 2 cut(s) 1622, 1654
PstNI CAGNNNCTG 1 cut(s) 1397
RsaI GTAC 4 cut(s) 54, 260, 524, 1733
RsaNI GTAC 4 cut(s) 53, 259, 523, 1732
RseI CAYNNNNRTG 4 cut(s) 369, 1134, 1646, 1665
SalI GTCGAC 2 cut(s) 224, 1344
SaqAI TTAA 8 cut(s) 18, 318, 566, 858, 1032, 1152, 1263, 1626
SatI GCNGC 4 cut(s) 60, 711, 1464, 1757
Sau96I GGNCC 3 cut(s) 691, 1299, 1844
ScrFI CCNGG 1 cut(s) 1500
SduI GDGCHC 2 cut(s) 140, 1106
SfaNI GCATC 9 cut(s) 634, 944, 1065, 1116, 1384, 1477, 1541, 1543, 1942
SfcI CTRYAG 2 cut(s) 1014, 1222
SfuI TTCGAA 1 cut(s) 1479
SinI GGWCC 2 cut(s) 691, 1844
SmiMI CAYNNNNRTG 4 cut(s) 369, 1134, 1646, 1665
SphI GCATGC 2 cut(s) 1428, 1670
SsiI CCGC 8 cut(s) 60, 168, 180, 694, 735, 1038, 1233, 1652
SspI AATATT 1 cut(s) 1525
SspMI CTAG 1 cut(s) 1056
StyD4I CCNGG 1 cut(s) 1498
StyI CCWWGG 2 cut(s) 1295, 1920
TaaI ACNGT 4 cut(s) 263, 732, 1133, 1833
TaiI ACGT 4 cut(s) 192, 279, 955, 1646
TaqI TCGA 6 cut(s) 225, 509, 810, 1345, 1479, 1720
TaqII GACCGA 1 cut(s) 686
TatI WGTACW 1 cut(s) 258
TauI GCSGC 1 cut(s) 62
TfiI GAWTC 4 cut(s) 958, 1717, 1873, 1962
Tru1I TTAA 8 cut(s) 18, 318, 566, 858, 1032, 1152, 1263, 1626
Tru9I TTAA 8 cut(s) 18, 318, 566, 858, 1032, 1152, 1263, 1626
TscAI CASTG 2 cut(s) 781, 1215
TseFI GTSAC 3 cut(s) 667, 1288, 1607
TseI GCWGC 3 cut(s) 710, 1463, 1756
Tsp45I GTSAC 3 cut(s) 667, 1288, 1607
TspGWI ACGGA 2 cut(s) 475, 595
TspRI CASTG 2 cut(s) 781, 1215
Van91I CCANNNNNTGG 1 cut(s) 1397
VpaK11BI GGWCC 2 cut(s) 691, 1844
XapI RAATTY 5 cut(s) 437, 477, 557, 1431, 1837
XceI RCATGY 5 cut(s) 627, 1317, 1428, 1670, 1989
XmiI GTMKAC 3 cut(s) 225, 1345, 1638
XmnI GAANNNNTTC 1 cut(s) 1435
XspI CTAG 1 cut(s) 1056
ZraI GACGTC 1 cut(s) 190
Zsp2I ATGCAT 3 cut(s) 394, 1315, 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.