zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40710 AT5G40710 |
| fragaria_vesca | FvH4_6g52420 FvH4_6g52420 FvH4_6g52420 FvH4_6g52420 FvH4_6g52420 FvH4_6g52420 FvH4_6g52420 |
| malus_domestica | MD09G1018200.v1.1 |
| prunus_persica | Prupe.3G298900_v2.0.a1 Prupe.3G298900_v2.0.a1 |
| pyrus_communis | pycom111g01520 |
| rosa_chinensis | RchiOBHm_Chr2g0174061 |
| rosa_laevigata | RLG00000022241 |
| rosa_multiflora | Rmu_sc0003188.1_g000033 Rmu_sc0041487.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00078490 |
| rosa_rugosa | Rorug02G0574300 Rorug02G0574400 Rorug02G0574500 |
| rosa_samantha | Rh2AG653700 Rh2BG665000 Rh2CG629300 Rh2DG679700 |
| rosa_wichuraiana | Rw2G053680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 235 |
| AccI | GTMKAC | 1 cut(s) | 592 |
| AciI | CCGC | 3 cut(s) | 235, 548, 606 |
| AcsI | RAATTY | 2 cut(s) | 107, 243 |
| AcuI | CTGAAG | 1 cut(s) | 564 |
| AfaI | GTAC | 1 cut(s) | 159 |
| AflIII | ACRYGT | 1 cut(s) | 595 |
| AgsI | TTSAA | 1 cut(s) | 203 |
| Ama87I | CYCGRG | 1 cut(s) | 152 |
| ApeKI | GCWGC | 6 cut(s) | 185, 262, 479, 509, 512, 515 |
| ApoI | RAATTY | 2 cut(s) | 107, 243 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 368, 400 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 613 |
| AspS9I | GGNCC | 1 cut(s) | 575 |
| AvaI | CYCGRG | 1 cut(s) | 152 |
| AvaII | GGWCC | 1 cut(s) | 575 |
| BbvI | GCAGC | 6 cut(s) | 197, 249, 466, 496, 499, 502 |
| BccI | CCATC | 1 cut(s) | 466 |
| BceAI | ACGGC | 2 cut(s) | 202, 619 |
| BciVI | GTATCC | 1 cut(s) | 332 |
| BfaI | CTAG | 1 cut(s) | 545 |
| BfuI | GTATCC | 1 cut(s) | 332 |
| BisI | GCNGC | 6 cut(s) | 186, 263, 480, 510, 513, 516 |
| BlpI | GCTNAGC | 1 cut(s) | 433 |
| BlsI | GCNGC | 6 cut(s) | 187, 264, 481, 511, 514, 517 |
| Bme18I | GGWCC | 1 cut(s) | 575 |
| BmeT110I | CYCGRG | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 575 |
| BmiI | GGNNCC | 1 cut(s) | 576 |
| BmsI | GCATC | 2 cut(s) | 149, 406 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 433 |
| BpuEI | CTTGAG | 2 cut(s) | 103, 605 |
| BsaBI | GATNNNNATC | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 1 cut(s) | 153 |
| Bse8I | GATNNNNATC | 1 cut(s) | 276 |
| BseDI | CCNNGG | 1 cut(s) | 153 |
| BseJI | GATNNNNATC | 1 cut(s) | 276 |
| BseRI | GAGGAG | 1 cut(s) | 377 |
| BseXI | GCAGC | 6 cut(s) | 197, 249, 466, 496, 499, 502 |
| BsgI | GTGCAG | 2 cut(s) | 248, 501 |
| BsiHKCI | CYCGRG | 1 cut(s) | 152 |
| BsoBI | CYCGRG | 1 cut(s) | 152 |
| Bsp143I | GATC | 4 cut(s) | 91, 251, 277, 289 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 433 |
| BspACI | CCGC | 3 cut(s) | 235, 548, 606 |
| BspLI | GGNNCC | 1 cut(s) | 576 |
| BsrBI | CCGCTC | 1 cut(s) | 235 |
| BssECI | CCNNGG | 1 cut(s) | 153 |
| BssMI | GATC | 4 cut(s) | 91, 251, 277, 289 |
| Bst4CI | ACNGT | 2 cut(s) | 344, 590 |
| Bst6I | CTCTTC | 3 cut(s) | 42, 198, 631 |
| BstDEI | CTNAG | 2 cut(s) | 71, 433 |
| BstKTI | GATC | 4 cut(s) | 94, 254, 280, 292 |
| BstMBI | GATC | 4 cut(s) | 91, 251, 277, 289 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 476, 515 |
| BstNSI | RCATGY | 1 cut(s) | 599 |
| BstV1I | GCAGC | 6 cut(s) | 197, 249, 466, 496, 499, 502 |
| BsuI | GTATCC | 1 cut(s) | 332 |
| BtgZI | GCGATG | 1 cut(s) | 485 |
| BtsI | GCAGTG | 1 cut(s) | 338 |
| BtsIMutI | CAGTG | 1 cut(s) | 338 |
| Cfr13I | GGNCC | 1 cut(s) | 575 |
| CseI | GACGC | 1 cut(s) | 635 |
| Csp6I | GTAC | 1 cut(s) | 158 |
| CviAII | CATG | 3 cut(s) | 82, 189, 596 |
| CviJI | RGCY | 1 cut(s) | 262 |
| CviKI_1 | RGCY | 1 cut(s) | 262 |
| CviQI | GTAC | 1 cut(s) | 158 |
| DdeI | CTNAG | 2 cut(s) | 71, 433 |
| DpnI | GATC | 4 cut(s) | 93, 253, 279, 291 |
| DpnII | GATC | 4 cut(s) | 91, 251, 277, 289 |
| Eam1104I | CTCTTC | 3 cut(s) | 42, 198, 631 |
| EarI | CTCTTC | 3 cut(s) | 42, 198, 631 |
| EciI | GGCGGA | 1 cut(s) | 621 |
| Eco47I | GGWCC | 1 cut(s) | 575 |
| Eco57I | CTGAAG | 1 cut(s) | 564 |
| Eco88I | CYCGRG | 1 cut(s) | 152 |
| EcoO109I | RGGNCCY | 1 cut(s) | 575 |
| FaeI | CATG | 3 cut(s) | 85, 192, 599 |
| FatI | CATG | 3 cut(s) | 81, 188, 595 |
| FauNDI | CATATG | 1 cut(s) | 531 |
| FblI | GTMKAC | 1 cut(s) | 592 |
| Fnu4HI | GCNGC | 6 cut(s) | 186, 263, 480, 510, 513, 516 |
| Fsp4HI | GCNGC | 6 cut(s) | 186, 263, 480, 510, 513, 516 |
| FspBI | CTAG | 1 cut(s) | 545 |
| GluI | GCNGC | 6 cut(s) | 186, 263, 480, 510, 513, 516 |
| HgaI | GACGC | 1 cut(s) | 635 |
| Hin1II | CATG | 3 cut(s) | 85, 192, 599 |
| HinfI | GANTC | 1 cut(s) | 418 |
| Hpy166II | GTNNAC | 2 cut(s) | 593, 601 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 249 |
| Hpy188III | TCNNGA | 4 cut(s) | 95, 168, 293, 374 |
| Hpy8I | GTNNAC | 2 cut(s) | 593, 601 |
| HpyAV | CCTTC | 1 cut(s) | 588 |
| HpyCH4III | ACNGT | 2 cut(s) | 344, 590 |
| HpyCH4IV | ACGT | 1 cut(s) | 125 |
| HpyCH4V | TGCA | 6 cut(s) | 67, 113, 265, 457, 501, 518 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 476, 515 |
| HpyF3I | CTNAG | 2 cut(s) | 71, 433 |
| HpySE526I | ACGT | 1 cut(s) | 125 |
| Hsp92II | CATG | 3 cut(s) | 85, 192, 599 |
| Kzo9I | GATC | 4 cut(s) | 91, 251, 277, 289 |
| LmnI | GCTCC | 1 cut(s) | 487 |
| LpnPI | CCDG | 7 cut(s) | 80, 278, 282, 379, 519, 557, 615 |
| Lsp1109I | GCAGC | 6 cut(s) | 197, 249, 466, 496, 499, 502 |
| LweI | GCATC | 2 cut(s) | 149, 406 |
| MaeI | CTAG | 1 cut(s) | 545 |
| MaeII | ACGT | 1 cut(s) | 125 |
| MaeIII | GTNAC | 1 cut(s) | 54 |
| MalI | GATC | 4 cut(s) | 93, 253, 279, 291 |
| MbiI | CCGCTC | 1 cut(s) | 235 |
| MboI | GATC | 4 cut(s) | 91, 251, 277, 289 |
| MboII | GAAGA | 5 cut(s) | 16, 19, 29, 215, 645 |
| MluCI | AATT | 3 cut(s) | 107, 243, 403 |
| MlyI | GAGTC | 1 cut(s) | 427 |
| MnlI | CCTC | 7 cut(s) | 97, 127, 130, 148, 355, 532, 632 |
| MroXI | GAANNNNTTC | 1 cut(s) | 613 |
| MseI | TTAA | 1 cut(s) | 212 |
| MslI | CAYNNNNRTG | 2 cut(s) | 462, 534 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 476, 515 |
| NdeI | CATATG | 1 cut(s) | 531 |
| NdeII | GATC | 4 cut(s) | 91, 251, 277, 289 |
| NlaIII | CATG | 3 cut(s) | 85, 192, 599 |
| NlaIV | GGNNCC | 1 cut(s) | 576 |
| NmuCI | GTSAC | 1 cut(s) | 54 |
| NspI | RCATGY | 1 cut(s) | 599 |
| PciI | ACATGT | 1 cut(s) | 595 |
| PdmI | GAANNNNTTC | 1 cut(s) | 613 |
| PkrI | GCNGC | 6 cut(s) | 187, 264, 481, 511, 514, 517 |
| PleI | GAGTC | 1 cut(s) | 426 |
| PpsI | GAGTC | 1 cut(s) | 426 |
| PpuMI | RGGWCCY | 1 cut(s) | 575 |
| PscI | ACATGT | 1 cut(s) | 595 |
| Psp5II | RGGWCCY | 1 cut(s) | 575 |
| PspN4I | GGNNCC | 1 cut(s) | 576 |
| PspPI | GGNCC | 1 cut(s) | 575 |
| PspPPI | RGGWCCY | 1 cut(s) | 575 |
| RsaI | GTAC | 1 cut(s) | 159 |
| RsaNI | GTAC | 1 cut(s) | 158 |
| RseI | CAYNNNNRTG | 2 cut(s) | 462, 534 |
| SaqAI | TTAA | 1 cut(s) | 212 |
| SatI | GCNGC | 6 cut(s) | 186, 263, 480, 510, 513, 516 |
| Sau3AI | GATC | 4 cut(s) | 91, 251, 277, 289 |
| Sau96I | GGNCC | 1 cut(s) | 575 |
| SchI | GAGTC | 1 cut(s) | 427 |
| SetI | ASST | 4 cut(s) | 119, 128, 159, 431 |
| SfaNI | GCATC | 2 cut(s) | 149, 406 |
| SinI | GGWCC | 1 cut(s) | 575 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 462, 534 |
| SmlI | CTYRAG | 2 cut(s) | 118, 620 |
| SmoI | CTYRAG | 2 cut(s) | 118, 620 |
| Sse9I | AATT | 3 cut(s) | 107, 243, 403 |
| SsiI | CCGC | 3 cut(s) | 235, 548, 606 |
| SspMI | CTAG | 1 cut(s) | 545 |
| TaaI | ACNGT | 2 cut(s) | 344, 590 |
| TaiI | ACGT | 1 cut(s) | 128 |
| TaqI | TCGA | 1 cut(s) | 167 |
| TasI | AATT | 3 cut(s) | 107, 243, 403 |
| Tru1I | TTAA | 1 cut(s) | 212 |
| Tru9I | TTAA | 1 cut(s) | 212 |
| TscAI | CASTG | 1 cut(s) | 338 |
| TseFI | GTSAC | 1 cut(s) | 54 |
| TseI | GCWGC | 6 cut(s) | 185, 262, 479, 509, 512, 515 |
| Tsp45I | GTSAC | 1 cut(s) | 54 |
| TspDTI | ATGAA | 3 cut(s) | 17, 34, 339 |
| TspGWI | ACGGA | 2 cut(s) | 299, 535 |
| TspRI | CASTG | 1 cut(s) | 338 |
| VpaK11BI | GGWCC | 1 cut(s) | 575 |
| XapI | RAATTY | 2 cut(s) | 107, 243 |
| XceI | RCATGY | 1 cut(s) | 599 |
| XmiI | GTMKAC | 1 cut(s) | 592 |
| XmnI | GAANNNNTTC | 1 cut(s) | 613 |
| XspI | CTAG | 1 cut(s) | 545 |