Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002568

Physical Location & Seq

Genomic Coordinates Reverse (-)

38856288 .. 38861390

Gene Structure 5103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g52920.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGACAATGGCCAAGAAGAACAGGTACCCTGGAGGGGGAGGGTATTACGGCGGTGTTTTTGAGCCGGCAGGTGAGTATGAGTGCTCGGGTAGCTCAGGAAGAATGGACACAGAAATGTCAGTCTCTGAGGGTTCGAGTGCTCCGAAAAGGAAGTGCATTAGTTCGGTTTCCGATTATAGTGACGTTTTCAGGGTGCCCAAGCAAGTTCTTCCGGTGTCAAGCATGTTGTCATCAGAAAGGAAGGATTTGATAAGTAAGTTGAGGACCGAGCTTGAACGGATTCAAGTACTTAAGAAGAGAGTTGAAATGCATAGGAGCAATGGTGTTACAGTGTCATCTTCTAGTGATATCCTCAGCTGTAGCAATGGGCTGCATGTGGAAAACTTGCCTAATTCAACAGCAGCTTTATCTTCTGGACAGGGGAAACCGCAGTACCCTGTGGCTCAGAAAGTGCATGAATTGAATCGCAGCAATTTTGGTAGGTTTAAGTCTGTCAATCAGGCTTCAACACCTAGCACTGCAACTGTAATGTTGATGAAACAATGCAAGACGGTATTGCAACGGTTAATGAACCAAAAATGTGCACATCCCTTTGTTAAACCTGTTGATATAGTGGCATTAAAGATTCCAGATTACTTCACTATTATCAAGCATCCAATGGATTTGGGTACAATACAGAAAAAGCTAACTTCAGGAGTTTATTCAAGCCCATTGGAGTTTGCTGCTGACGTCAGGCTTACTTTTACCAATGCTATGACTTACAATCCAGGAGACAATCTTGTACATGTATATGCTGATGATCTTAGTAAGAAGTTTGAACTCTGGTGGAAACCCATTGAGAAGAAAATCCAAAAGGCAGAACCACCAGCTAAAACTCCTGCTCATGAAGACATGGAAACTGCCAAGCCAATCCTCCCCTCAAGAAAGAGGCCAATCACTTCAATGCCACGTGAAGTAAAGTCTGAGCCTGCTAAGCGGGTAATGTCAGTGAAGGACAGGCAAAATCTGGTGAGAGATTTGGAGTCTTTGCCTCCAGAAGATATTCCTTCAAGTATCATCAATTTCTTGAGGGAACACAGTTCAAAAGGAGAGGACAATCCAGAAGGTGAGATTGAGATTAGCATCGATGACTTCAGTGATGATAGCTTGTTTACGATCCGGAAACTCTTGGATGAGCATGCACAAGAGAAAGAAAAGAACCATGTCATGGCTGAGCCTTGTTCAATGGAGCTTTTGAATGACTCTGGATTGAGCAATTCGTCCATGCAGCCATGTGAAGGGAATGACCTCGATGAGGAGGATGTTGATATTGGTGGAAACGAGCCCCCTGTCTCAAGCTATCCTCCTGTTGAGATAGAAAAGGATACTTGTCACAGAAGCAGTAAAAACATAAGCCCAAGCAGCTCCAGTGAGTCGGATTCAAGCAGTTCCGAGAGTGACAGTGACGATGATTCTAAGGCCTCTAGTCCAGTACTACAACCCTTCCGTTCTGAAGCTCAAGCAGATGAAAAGACAACAGTTGGAAATCCGCTTGAAGGAACTCAGTCTGATAGTGGGTTGGATCAAGTTGAAGAAACTTCCCAGCCAAAGCCAAGTTCTGTTGAATCAGATAGCCGTCAGGATGGGGACAGTGCTCCCACAGAGAGGTCAGTCTCCCCTGATAAGCAGCATAGAGCCGCTATGTTGAAGCATCGTTTTGCTGATACCATTTTAAGAGCTCAAGCGAAAACCTTTGATCAGGGTGACAAAGGGGATCCGGAGAAATTGCGGCGACAGAGGGAGAAACTTGAACTGCAACAGAAGAAAGAAAAGGCTCGGTTGCAAGCAGAAGCTAAAGCTGCCGAGGAAGCAAGAAGAAAAAAAGAAGCAGAAGCTCTAGCCGAGGCTAAAAGGAAGAGGGAGCTTGAGAGGGAAGCAGCTAGACAGGCATTGCTGCAGATGGAGAAGACTGTTGAAATCAATGACTCTCGGTTCCTTCAAGATCTGGAAATGCAAATGCTTACAGCCCCCATGGAGCAGTTACCAATCAAAGTAGATGAAACTACAAGCCCAGATCATTCAGATGATGGATTAGGTGGTTTCAAGTTTCATGGCAGTAACCCCTTGGAACAACTCGGCTTGTTCATGAAAAAGGATCAGGATGACGAGGAAGAAGAAGCTGCTGATCTCGTTGCCCCAAAACCTGTAGATGATATAGAGGAGGGAGAAATCGATATTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

741

Amino Acids

82.24

Weight (kDa)

5.14

Isoelectric Point (pI)

58.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	182 - 266	1.7e-22	Bromodomain
BET	PF17035	328 - 391	4e-07	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01770 AT3G01770 AT3G27260 AT3G27260 AT3G27260 AT3G27260 AT5G14270 AT5G14270 AT5G14270
fragaria_vesca	FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920
malus_domestica	MD09G1016100.v1.1 MD17G1016600.v1.1
prunus_persica	Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1
pyrus_communis	pycom111g01310 pycom17g01330
rosa_chinensis	RchiOBHm_Chr2g0174631
rosa_laevigata	RLG00000022278
rosa_multiflora	Rmu_sc0003649.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077990
rosa_rugosa	Rorug02G0578200 Rorug02G0578300 Rorug02G0578400 Rorug02G0578500
rosa_samantha	Rh2AG659500 Rh2BG670300 Rh2CG633600 Rh2DG684000
rosa_wichuraiana	Rw2G054010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	59
AatII	GACGTC	1 cut(s)	732
Acc36I	ACCTGC	1 cut(s)	59
Acc65I	GGTACC	1 cut(s)	24
AccB1I	GGYRCC	2 cut(s)	24, 193
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccIII	TCCGGA	2 cut(s)	1158, 1756
AciI	CCGC	6 cut(s)	51, 428, 976, 1529, 1677, 1768
AclWI	GGATC	5 cut(s)	1150, 1569, 1748, 1761, 2142
AcoI	YGGCCR	1 cut(s)	9
AcuI	CTGAAG	3 cut(s)	675, 1117, 1512
AcvI	CACGTG	1 cut(s)	950
AcyI	GRCGYC	1 cut(s)	729
AfaI	GTAC	6 cut(s)	26, 288, 434, 670, 783, 1473
AfiI	CCNNNNNNNGG	7 cut(s)	34, 35, 1207, 1277, 1294, 1535, 1644
AflII	CTTAAG	1 cut(s)	290
AflIII	ACRYGT	1 cut(s)	784
AjnI	CCWGG	2 cut(s)	28, 766
AjuI	GAANNNNNNNTTGG	2 cut(s)	1579, 1611
Alw21I	GWGCWC	5 cut(s)	86, 142, 586, 1636, 1720
Alw26I	GTCTC	4 cut(s)	127, 765, 1336, 1657
Alw44I	GTGCAC	1 cut(s)	582
AlwI	GGATC	5 cut(s)	1150, 1569, 1748, 1761, 2142
AlwNI	CAGNNNCTG	1 cut(s)	125
Ama87I	CYCGRG	1 cut(s)	85
Aor13HI	TCCGGA	2 cut(s)	1158, 1756
AoxI	GGCC	3 cut(s)	9, 929, 1458
ApaLI	GTGCAC	1 cut(s)	582
Asp700I	GAANNNNTTC	2 cut(s)	279, 1041
Asp718I	GGTACC	1 cut(s)	24
AspS9I	GGNCC	1 cut(s)	264
AsuHPI	GGTGA	4 cut(s)	83, 1021, 1118, 1754
AvaI	CYCGRG	1 cut(s)	85
AvaII	GGWCC	1 cut(s)	264
BaeGI	GKGCMC	2 cut(s)	198, 586
BaeI	ACNNNNGTAYC	2 cut(s)	416, 449
BalI	TGGCCA	1 cut(s)	11
BamHI	GGATCC	1 cut(s)	1753
BanI	GGYRCC	2 cut(s)	24, 193
BanII	GRGCYC	2 cut(s)	1326, 1720
BarI	GAAGNNNNNNTAC	2 cut(s)	8, 40
BbrPI	CACGTG	1 cut(s)	950
BbsI	GAAGAC	2 cut(s)	894, 1952
Bbv12I	GWGCWC	5 cut(s)	86, 142, 586, 1636, 1720
BbvCI	CCTCAGC	1 cut(s)	353
BccI	CCATC	3 cut(s)	1616, 1933, 2060
BceAI	ACGGC	2 cut(s)	64, 1599
BciT130I	CCWGG	2 cut(s)	30, 768
BciVI	GTATCC	1 cut(s)	1357
BclI	TGATCA	1 cut(s)	1735
BcoDI	GTCTC	4 cut(s)	127, 765, 1336, 1657
BfaI	CTAG	5 cut(s)	342, 513, 1464, 1877, 1920
BfmI	CTRYAG	3 cut(s)	358, 1934, 2184
BfrI	CTTAAG	1 cut(s)	290
BfuAI	ACCTGC	1 cut(s)	59
BfuI	GTATCC	1 cut(s)	1357
BglII	AGATCT	1 cut(s)	1981
BlpI	GCTNAGC	2 cut(s)	972, 1212
BmcAI	AGTACT	2 cut(s)	288, 1473
Bme1390I	CCNGG	2 cut(s)	30, 768
Bme18I	GGWCC	1 cut(s)	264
BmeT110I	CYCGRG	1 cut(s)	85
BmgT120I	GGNCC	1 cut(s)	264
BmiI	GGNNCC	4 cut(s)	26, 195, 1755, 1973
BmrFI	CCNGG	2 cut(s)	30, 768
BmsI	GCATC	3 cut(s)	661, 1131, 1699
BpiI	GAAGAC	2 cut(s)	894, 1952
BpmI	CTGGAG	3 cut(s)	51, 1017, 1390
Bpu10I	CCTNAGC	2 cut(s)	94, 353
Bpu1102I	GCTNAGC	2 cut(s)	972, 1212
BpuEI	CTTGAG	6 cut(s)	904, 1087, 1318, 1482, 1704, 1925
Bsa29I	ATCGAT	2 cut(s)	1125, 2211
BsaAI	YACGTR	1 cut(s)	950
BsaBI	GATNNNNATC	1 cut(s)	1121
BsaHI	GRCGYC	1 cut(s)	729
BsaJI	CCNNGG	5 cut(s)	28, 1842, 1881, 2010, 2103
BsaWI	WCCGGW	3 cut(s)	211, 1158, 1756
BsaXI	ACNNNNNCTCC	2 cut(s)	307, 337
Bsc4I	CCNNNNNNNGG	7 cut(s)	34, 35, 1207, 1277, 1294, 1535, 1644
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	2 cut(s)	1407, 1469
Bse3DI	GCAATG	3 cut(s)	325, 370, 1928
Bse8I	GATNNNNATC	1 cut(s)	1121
BseAI	TCCGGA	2 cut(s)	1158, 1756
BseBI	CCWGG	2 cut(s)	30, 768
BseCI	ATCGAT	2 cut(s)	1125, 2211
BseDI	CCNNGG	5 cut(s)	28, 1842, 1881, 2010, 2103
BseGI	GGATG	6 cut(s)	586, 652, 1177, 1306, 1627, 2146
BseJI	GATNNNNATC	1 cut(s)	1121
BseLI	CCNNNNNNNGG	7 cut(s)	34, 35, 1207, 1277, 1294, 1535, 1644
BseMI	GCAATG	3 cut(s)	325, 370, 1928
BseMII	CTCAG	7 cut(s)	108, 117, 367, 458, 954, 1203, 1556
BseNI	ACTGG	2 cut(s)	1407, 1469
BseRI	GAGGAG	2 cut(s)	1310, 2213
BseSI	GKGCMC	2 cut(s)	198, 586
BseYI	CCCAGC	1 cut(s)	1581
BshFI	GGCC	3 cut(s)	11, 931, 1460
BshNI	GGYRCC	2 cut(s)	24, 193
BshVI	ATCGAT	2 cut(s)	1125, 2211
BsiHKAI	GWGCWC	5 cut(s)	86, 142, 586, 1636, 1720
BsiHKCI	CYCGRG	1 cut(s)	85
BsiSI	CCGG	4 cut(s)	65, 212, 1159, 1757
BslFI	GGGAC	1 cut(s)	1640
BslI	CCNNNNNNNGG	7 cut(s)	34, 35, 1207, 1277, 1294, 1535, 1644
BsmAI	GTCTC	4 cut(s)	127, 765, 1336, 1657
BsmFI	GGGAC	1 cut(s)	1640
BsnI	GGCC	3 cut(s)	11, 931, 1460
BsoBI	CYCGRG	1 cut(s)	85
Bsp1286I	GDGCHC	7 cut(s)	86, 142, 198, 586, 1326, 1636, 1720
Bsp13I	TCCGGA	2 cut(s)	1158, 1756
Bsp1407I	TGTACA	1 cut(s)	781
Bsp143I	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
Bsp1720I	GCTNAGC	2 cut(s)	972, 1212
Bsp19I	CCATGG	1 cut(s)	2010
BspACI	CCGC	6 cut(s)	51, 428, 976, 1529, 1677, 1768
BspANI	GGCC	3 cut(s)	11, 931, 1460
BspCNI	CTCAG	7 cut(s)	107, 118, 366, 457, 955, 1204, 1555
BspDI	ATCGAT	2 cut(s)	1125, 2211
BspEI	TCCGGA	2 cut(s)	1158, 1756
BspHI	TCATGA	2 cut(s)	883, 2124
BspLI	GGNNCC	4 cut(s)	26, 195, 1755, 1973
BspMAI	CTGCAG	1 cut(s)	1938
BspMI	ACCTGC	1 cut(s)	59
BspPI	GGATC	5 cut(s)	1150, 1569, 1748, 1761, 2142
BspT107I	GGYRCC	2 cut(s)	24, 193
BspTI	CTTAAG	1 cut(s)	290
BsrDI	GCAATG	3 cut(s)	325, 370, 1928
BsrFI	RCCGGY	1 cut(s)	64
BsrGI	TGTACA	1 cut(s)	781
BsrI	ACTGG	2 cut(s)	1407, 1469
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	5 cut(s)	28, 1842, 1881, 2010, 2103
BssMI	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
BssNI	GRCGYC	1 cut(s)	729
BssT1I	CCWWGG	2 cut(s)	2010, 2103
Bst2UI	CCWGG	2 cut(s)	30, 768
Bst4CI	ACNGT	9 cut(s)	331, 526, 553, 564, 1079, 1442, 1519, 1631, 1951
Bst6I	CTCTTC	2 cut(s)	290, 1889
BstACI	GRCGYC	1 cut(s)	729
BstAFI	CTTAAG	1 cut(s)	290
BstAUI	TGTACA	1 cut(s)	781
BstBAI	YACGTR	1 cut(s)	950
BstC8I	GCNNGC	4 cut(s)	66, 969, 1179, 1824
BstDSI	CCRYGG	1 cut(s)	2010
BstENI	CCTNNNNNAGG	1 cut(s)	1292
BstF5I	GGATG	6 cut(s)	586, 652, 1177, 1306, 1627, 2146
BstKTI	GATC	9 cut(s)	802, 1158, 1564, 1738, 1756, 1984, 2056, 2137, 2167
BstMAI	GTCTC	4 cut(s)	127, 765, 1336, 1657
BstMBI	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
BstMWI	GCNNNNNNNGC	6 cut(s)	90, 973, 1401, 1838, 1847, 1925
BstNI	CCWGG	2 cut(s)	30, 768
BstNSI	RCATGY	4 cut(s)	226, 377, 788, 1181
BstSCI	CCNGG	2 cut(s)	28, 766
BstSFI	CTRYAG	3 cut(s)	358, 1934, 2184
BstSLI	GKGCMC	2 cut(s)	198, 586
BstV2I	GAAGAC	2 cut(s)	894, 1952
BstX2I	RGATCY	2 cut(s)	1753, 1981
BstYI	RGATCY	2 cut(s)	1753, 1981
Bsu15I	ATCGAT	2 cut(s)	1125, 2211
BsuI	GTATCC	1 cut(s)	1357
BsuRI	GGCC	3 cut(s)	11, 931, 1460
BsuTUI	ATCGAT	2 cut(s)	1125, 2211
BtgI	CCRYGG	1 cut(s)	2010
BtsCI	GGATG	6 cut(s)	586, 652, 1177, 1306, 1627, 2146
BtsI	GCAGTG	1 cut(s)	516
BtsIMutI	CAGTG	7 cut(s)	336, 516, 993, 1141, 1414, 1447, 1636
BveI	ACCTGC	1 cut(s)	59
Cac8I	GCNNGC	4 cut(s)	66, 969, 1179, 1824
CaiI	CAGNNNCTG	1 cut(s)	125
CciI	TCATGA	2 cut(s)	883, 2124
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	1 cut(s)	264
ClaI	ATCGAT	2 cut(s)	1125, 2211
Csp6I	GTAC	6 cut(s)	25, 287, 433, 669, 782, 1472
CviQI	GTAC	6 cut(s)	25, 287, 433, 669, 782, 1472
DpnI	GATC	9 cut(s)	801, 1157, 1563, 1737, 1755, 1983, 2055, 2136, 2166
DpnII	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
EaeI	YGGCCR	1 cut(s)	9
Eam1104I	CTCTTC	2 cut(s)	290, 1889
EarI	CTCTTC	2 cut(s)	290, 1889
Ecl136II	GAGCTC	1 cut(s)	1718
Eco130I	CCWWGG	2 cut(s)	2010, 2103
Eco147I	AGGCCT	1 cut(s)	1460
Eco24I	GRGCYC	2 cut(s)	1326, 1720
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	1 cut(s)	264
Eco53kI	GAGCTC	1 cut(s)	1718
Eco57I	CTGAAG	3 cut(s)	675, 1117, 1512
Eco72I	CACGTG	1 cut(s)	950
Eco88I	CYCGRG	1 cut(s)	85
EcoICRI	GAGCTC	1 cut(s)	1718
EcoNI	CCTNNNNNAGG	1 cut(s)	1292
EcoRII	CCWGG	2 cut(s)	28, 766
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	2 cut(s)	2010, 2103
EcoT22I	ATGCAT	1 cut(s)	312
EcoT38I	GRGCYC	2 cut(s)	1326, 1720
ErhI	CCWWGG	2 cut(s)	2010, 2103
FaqI	GGGAC	1 cut(s)	1640
FauI	CCCGC	1 cut(s)	969
FbaI	TGATCA	1 cut(s)	1735
FokI	GGATG	6 cut(s)	573, 639, 1184, 1313, 1634, 2153
FriOI	GRGCYC	2 cut(s)	1326, 1720
FspBI	CTAG	5 cut(s)	342, 513, 1464, 1877, 1920
GsaI	CCCAGC	1 cut(s)	1585
GsuI	CTGGAG	3 cut(s)	51, 1017, 1390
HaeIII	GGCC	3 cut(s)	11, 931, 1460
HapII	CCGG	4 cut(s)	65, 212, 1159, 1757
Hin1I	GRCGYC	1 cut(s)	729
HpaII	CCGG	4 cut(s)	65, 212, 1159, 1757
HphI	GGTGA	4 cut(s)	83, 1021, 1118, 1754
Hpy166II	GTNNAC	2 cut(s)	584, 1152
Hpy8I	GTNNAC	2 cut(s)	584, 1152
HpyAV	CCTTC	8 cut(s)	235, 985, 1056, 1097, 1271, 1492, 1529, 1985
HpyCH4III	ACNGT	9 cut(s)	331, 526, 553, 564, 1079, 1442, 1519, 1631, 1951
HpyCH4IV	ACGT	3 cut(s)	183, 729, 949
HpyF10VI	GCNNNNNNNGC	6 cut(s)	90, 973, 1401, 1838, 1847, 1925
HpySE526I	ACGT	3 cut(s)	183, 729, 949
Hsp92I	GRCGYC	1 cut(s)	729
Kpn2I	TCCGGA	2 cut(s)	1158, 1756
KpnI	GGTACC	1 cut(s)	28
KroI	GCCGGC	1 cut(s)	64
KroNI	GCCGGC	1 cut(s)	66
Ksp22I	TGATCA	1 cut(s)	1735
Kzo9I	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
LmnI	GCTCC	7 cut(s)	145, 315, 1228, 1409, 1639, 1900, 2014
LweI	GCATC	3 cut(s)	661, 1131, 1699
MaeI	CTAG	5 cut(s)	342, 513, 1464, 1877, 1920
MaeII	ACGT	3 cut(s)	183, 729, 949
MaeIII	GTNAC	8 cut(s)	179, 325, 1370, 1436, 1442, 1742, 2019, 2096
MalI	GATC	9 cut(s)	801, 1157, 1563, 1737, 1755, 1983, 2055, 2136, 2166
MboI	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
MflI	RGATCY	2 cut(s)	1753, 1981
MhlI	GDGCHC	7 cut(s)	86, 142, 198, 586, 1326, 1636, 1720
MlsI	TGGCCA	1 cut(s)	11
MluCI	AATT	6 cut(s)	391, 458, 472, 1060, 1255, 1763
MluNI	TGGCCA	1 cut(s)	11
MlyI	GAGTC	4 cut(s)	1031, 1235, 1421, 1958
MmeI	TCCRAC	3 cut(s)	1395, 1501, 1539
Mox20I	TGGCCA	1 cut(s)	11
Mph1103I	ATGCAT	1 cut(s)	312
MroI	TCCGGA	2 cut(s)	1158, 1756
MroNI	GCCGGC	1 cut(s)	64
MroXI	GAANNNNTTC	2 cut(s)	279, 1041
MscI	TGGCCA	1 cut(s)	11
MseI	TTAA	6 cut(s)	291, 486, 566, 597, 620, 1712
MslI	CAYNNNNRTG	4 cut(s)	113, 789, 941, 2061
Msp20I	TGGCCA	1 cut(s)	11
MspA1I	CMGCKG	1 cut(s)	357
MspCI	CTTAAG	1 cut(s)	290
MspI	CCGG	4 cut(s)	65, 212, 1159, 1757
MspR9I	CCNGG	2 cut(s)	30, 768
MvaI	CCWGG	2 cut(s)	30, 768
MwoI	GCNNNNNNNGC	6 cut(s)	90, 973, 1401, 1838, 1847, 1925
NaeI	GCCGGC	1 cut(s)	66
NcoI	CCATGG	1 cut(s)	2010
NdeII	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
NgoMIV	GCCGGC	1 cut(s)	64
NlaIV	GGNNCC	4 cut(s)	26, 195, 1755, 1973
NmeAIII	GCCGAG	3 cut(s)	1867, 1906, 2094
NmuCI	GTSAC	5 cut(s)	179, 1370, 1436, 1442, 1742
NsiI	ATGCAT	1 cut(s)	312
NspI	RCATGY	4 cut(s)	226, 377, 788, 1181
PaeI	GCATGC	1 cut(s)	1181
PagI	TCATGA	2 cut(s)	883, 2124
PaqCI	CACCTGC	1 cut(s)	59
PceI	AGGCCT	1 cut(s)	1460
PciI	ACATGT	1 cut(s)	784
PcsI	WCGNNNNNNNCGW	1 cut(s)	140
PdiI	GCCGGC	1 cut(s)	66
PdmI	GAANNNNTTC	2 cut(s)	279, 1041
PfeI	GAWTC	6 cut(s)	280, 463, 625, 1418, 1451, 1604
PflMI	CCANNNNNTGG	1 cut(s)	1207
PfoI	TCCNGGA	1 cut(s)	766
PleI	GAGTC	4 cut(s)	1030, 1235, 1420, 1958
PmaCI	CACGTG	1 cut(s)	950
PmlI	CACGTG	1 cut(s)	950
PpsI	GAGTC	4 cut(s)	1030, 1235, 1420, 1958
Ppu21I	YACGTR	1 cut(s)	950
PscI	ACATGT	1 cut(s)	784
Psp124BI	GAGCTC	1 cut(s)	1720
Psp6I	CCWGG	2 cut(s)	28, 766
PspCI	CACGTG	1 cut(s)	950
PspFI	CCCAGC	1 cut(s)	1581
PspGI	CCWGG	2 cut(s)	28, 766
PspN4I	GGNNCC	4 cut(s)	26, 195, 1755, 1973
PspPI	GGNCC	1 cut(s)	264
PstI	CTGCAG	1 cut(s)	1938
PstNI	CAGNNNCTG	1 cut(s)	125
PsuI	RGATCY	2 cut(s)	1753, 1981
PvuII	CAGCTG	1 cut(s)	357
RsaI	GTAC	6 cut(s)	26, 288, 434, 670, 783, 1473
RsaNI	GTAC	6 cut(s)	25, 287, 433, 669, 782, 1472
RseI	CAYNNNNRTG	4 cut(s)	113, 789, 941, 2061
SacI	GAGCTC	1 cut(s)	1720
SaqAI	TTAA	6 cut(s)	291, 486, 566, 597, 620, 1712
Sau3AI	GATC	9 cut(s)	799, 1155, 1561, 1735, 1753, 1981, 2053, 2134, 2164
Sau96I	GGNCC	1 cut(s)	264
ScaI	AGTACT	2 cut(s)	288, 1473
SchI	GAGTC	4 cut(s)	1031, 1235, 1421, 1958
ScrFI	CCNGG	2 cut(s)	30, 768
SduI	GDGCHC	7 cut(s)	86, 142, 198, 586, 1326, 1636, 1720
SfaNI	GCATC	3 cut(s)	661, 1131, 1699
SfcI	CTRYAG	3 cut(s)	358, 1934, 2184
SinI	GGWCC	1 cut(s)	264
SmiMI	CAYNNNNRTG	4 cut(s)	113, 789, 941, 2061
SmlI	CTYRAG	7 cut(s)	290, 919, 1066, 1333, 1497, 1719, 1904
SmoI	CTYRAG	7 cut(s)	290, 919, 1066, 1333, 1497, 1719, 1904
SphI	GCATGC	1 cut(s)	1181
Sse9I	AATT	6 cut(s)	391, 458, 472, 1060, 1255, 1763
SseBI	AGGCCT	1 cut(s)	1460
SsiI	CCGC	6 cut(s)	51, 428, 976, 1529, 1677, 1768
SspMI	CTAG	5 cut(s)	342, 513, 1464, 1877, 1920
SstI	GAGCTC	1 cut(s)	1720
StuI	AGGCCT	1 cut(s)	1460
StyD4I	CCNGG	2 cut(s)	28, 766
StyI	CCWWGG	2 cut(s)	2010, 2103
TaaI	ACNGT	9 cut(s)	331, 526, 553, 564, 1079, 1442, 1519, 1631, 1951
TaiI	ACGT	3 cut(s)	186, 732, 952
TaqI	TCGA	4 cut(s)	134, 1125, 1290, 2211
TaqII	GACCGA	1 cut(s)	281
TasI	AATT	6 cut(s)	391, 458, 472, 1060, 1255, 1763
TatI	WGTACW	3 cut(s)	286, 781, 1471
TauI	GCSGC	2 cut(s)	1679, 1771
TfiI	GAWTC	6 cut(s)	280, 463, 625, 1418, 1451, 1604
Tru1I	TTAA	6 cut(s)	291, 486, 566, 597, 620, 1712
Tru9I	TTAA	6 cut(s)	291, 486, 566, 597, 620, 1712
TscAI	CASTG	7 cut(s)	336, 523, 993, 1141, 1414, 1447, 1636
TseFI	GTSAC	5 cut(s)	179, 1370, 1436, 1442, 1742
Tsp45I	GTSAC	5 cut(s)	179, 1370, 1436, 1442, 1742
TspDTI	ATGAA	9 cut(s)	471, 551, 584, 900, 1521, 2052, 2078, 2113, 2141
TspGWI	ACGGA	2 cut(s)	292, 1475
TspRI	CASTG	7 cut(s)	336, 523, 993, 1141, 1414, 1447, 1636
Van91I	CCANNNNNTGG	1 cut(s)	1207
Vha464I	CTTAAG	1 cut(s)	290
VneI	GTGCAC	1 cut(s)	582
VpaK11BI	GGWCC	1 cut(s)	264
XagI	CCTNNNNNAGG	1 cut(s)	1292
XceI	RCATGY	4 cut(s)	226, 377, 788, 1181
XmnI	GAANNNNTTC	2 cut(s)	279, 1041
XspI	CTAG	5 cut(s)	342, 513, 1464, 1877, 1920
ZraI	GACGTC	1 cut(s)	730
ZrmI	AGTACT	2 cut(s)	288, 1473
Zsp2I	ATGCAT	1 cut(s)	312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.