Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002568

Physical Location & Seq

Genomic Coordinates Forward (+)

1415811 .. 1419959

Gene Structure 4149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00077990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGACGAAGAGGAACAGGTACGCTGGAGGGGAGGGTATTGCGGTGGTGTTTTTGAGCCGGCGGGTGGATATGAGTGCTCGGGTAGCTCAGGAAGAATCGACACAGAAAGTGCCCACGCAAGTTCTCCCCTTGTCAAGGATGTTGTCGTCAGAAAGGAAGGATTTGATGAACAGGTTGAGGACGGAGCTTGAACAGATTCAGGTACTTAAGAAGAGAGTTGAAACACATAGAAGCAATGGTGTTGCAGTGTCGTCTTCTAGTGATATCCTCAGCTGTAGCAATGGACCAAATGGGCTGCATGTGGAAAATTTGCAAAAGTCGTCAGCTTTGTCTTCTGGGCAGAGGAAAAAAGAGTATCCTGTGGCTAAGAAAGTGCATGAGTTGAATCCCGGGAATTCTGGTAGGTTCAAGTCGGTCAGTCAGGCTTCAAAACCTAGCACTGCAAGTGTAATGTTGATGAACCAATGTGAGAAGGTATTACGACGGGTAATGACCCAAAAATGTGCACATCCATTTAATAAACCTGTTGATATAGTGGAGTTAAAGATTCCAGATTACTTTACTATTATCAAGCATCCAATGGATTTGGGTACAATAAAGAAAAAGCTAACTTCAGGATCTTATTCAAGCCCGTTGGAGTTTGCTGCTGATGTCAGGCTTACTTTTACCAATGCTATGACCTACAATCCACCGGACAATAATGTACATATATGGGCTGATGATCTTAGTAAATATTTTGAACTCTGGTGGAAACCCATTGAGAAGAAACTTCCAAAGGCGGATCCACCAGCTAAATCTGCTCCTCATGAAGGCATGGAAACTGCCAAGCCAATCCTCCACTCAAGAAAGAGGACAATCACTTCAATGCAACATGAAGTAAAGTCTGAGCCTGCTAAGCGGGTAATGTCAACGGAGGAGAAGCACACTCTGACAAGAGATTTGGGGTCTTTGCCACCAGAAGAAATTCCTTCAAACATCATTGATTTCTTGAGGGAACATAGTTCAAATGGAAAGGAGAATCCAGAAGATGAGATTATGATTGACATCTATGTCCTCAGTGATGATACCTTGTTTGCACTTCGGAAACTCTTAGATGAGTATGCACAAGAGAAAGAAAAGAATCATGTGAGGGCAGAGCCTTGTTCAATGGAGCTTTTGAATGATTCAGGGTTGAGCAATTCATCCATGCAGCCATGTGAAGGGAATGACCTCGCTGAGGAGGATGTTGATATTGGTGGAAATGAGCCCCCTGTCACAAGCTATCCTCCTGTTGAGATAGAAAAGGATACAGGCCATAGAAGCAGTAAAAACATAAGCCCAAGCAGCTCCAATGAGTCAGATTCAAGCAGTTCCGAGAGTGACAGTGATGATGATTCTAAGGTCTCAAGTCCAGTACTACAACCCTTCAGTTCTGAAACTCAAGCAGATGAAAAGACAACAGTTGGAAATCCCCTTGAAGGAACTCAGTCTGACAGTGGGTTGGATCAAGTTGATCAAACTTCCGAGCCAAAGCCAAGTTCAGTTGAATCAGATAGCCGTCAGGATGGGGACAGTGCTCCCACAGAGAGGCCAGTCTCCCCTGATAAGCAGCATAGAGCCGCTCTGTTGAAGCATCGTTTTGCTGATACCATTTTAAGAGCTCAAGAGAAAACCTTTATTCAGGGTGACAAAGGGGATCCTGAGAAATTGCGACGGCAGAGGGAGGAGCTTGAACTACAACAGAAGAAAGAAAAGGCCCGGTTGCAAGCAGAAGCCAAAGCTGCTGAGGAGGCTAGAAGAAAAAAAGAAGCAGAAGCTGTAGCCGAGGCTAAACGGAAGAGGGAGCTTGAGAGAGAAGCAGCAAGACAGGCTTTGCTGCAGATGGAGAAGACTGTTGAAATCAATGACTCTCGGTTCCTTCAAGATCTGGAAATGCAAATGCTTACAGCTCCCATGGAGCAGTTACCAATTTCAGTAGATGAAACAAGCCCAGATAATTCAGAGGATGGTTTAGGAGGTTTCAACTTCCGGGGCAGTAACCCCTTGGAACAACTTGGCTTGTACATGAAAAAGGATCAGGATGATGAGGAAGAAGAAGCTGATCTTGTCGTTCCAAATCCTGTAGATGATATAGAGGAGGGAGAAATTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

710

Amino Acids

79.41

Weight (kDa)

5.16

Isoelectric Point (pI)

56.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	156 - 237	3e-22	Bromodomain
BET	PF17035	301 - 365	1.4e-12	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01770 AT3G01770 AT3G27260 AT3G27260 AT3G27260 AT3G27260 AT5G14270 AT5G14270 AT5G14270
fragaria_vesca	FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920 FvH4_6g52920
malus_domestica	MD09G1016100.v1.1 MD17G1016600.v1.1
prunus_persica	Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1 Prupe.3G301300_v2.0.a1
pyrus_communis	pycom111g01310 pycom17g01330
rosa_chinensis	RchiOBHm_Chr2g0174631
rosa_laevigata	RLG00000022278
rosa_multiflora	Rmu_sc0003649.1_g000001
rosa_roxburghii	Rroxscaffold_2G00077990
rosa_rugosa	Rorug02G0578200 Rorug02G0578300 Rorug02G0578400 Rorug02G0578500
rosa_samantha	Rh2AG659500 Rh2BG670300 Rh2CG633600 Rh2DG684000
rosa_wichuraiana	Rw2G054010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1049
AccBSI	CCGCTC	1 cut(s)	1601
AciI	CCGC	5 cut(s)	41, 61, 779, 898, 1599
AclWI	GGATC	7 cut(s)	625, 776, 789, 1491, 1670, 1683, 2061
AcsI	RAATTY	3 cut(s)	307, 394, 963
AcuI	CTGAAG	2 cut(s)	597, 1390
AfaI	GTAC	6 cut(s)	20, 204, 592, 705, 1395, 2042
AfiI	CCNNNNNNNGG	7 cut(s)	64, 135, 809, 1199, 1216, 1457, 1566
AflII	CTTAAG	1 cut(s)	206
AjuI	GAANNNNNNNTTGG	2 cut(s)	1501, 1533
Alw21I	GWGCWC	4 cut(s)	79, 508, 1558, 1642
Alw26I	GTCTC	2 cut(s)	1387, 1579
Alw44I	GTGCAC	1 cut(s)	504
AlwI	GGATC	7 cut(s)	625, 776, 789, 1491, 1670, 1683, 2061
AlwNI	CAGNNNCTG	1 cut(s)	1796
Ama87I	CYCGRG	2 cut(s)	78, 389
AoxI	GGCC	3 cut(s)	1291, 1568, 1734
ApaLI	GTGCAC	1 cut(s)	504
ApeKI	GCWGC	8 cut(s)	295, 644, 1189, 1323, 1588, 1760, 1838, 1855
ApoI	RAATTY	3 cut(s)	307, 394, 963
ArsI	GACNNNNNNTTYG	2 cut(s)	922, 954
Asp700I	GAANNNNTTC	2 cut(s)	195, 963
AspS9I	GGNCC	2 cut(s)	284, 1735
AsuC2I	CCSGG	4 cut(s)	390, 391, 1738, 2009
AsuHPI	GGTGA	1 cut(s)	1676
AvaI	CYCGRG	2 cut(s)	78, 389
AvaII	GGWCC	1 cut(s)	284
BaeGI	GKGCMC	2 cut(s)	114, 508
BamHI	GGATCC	2 cut(s)	781, 1675
BanII	GRGCYC	2 cut(s)	1248, 1642
BbsI	GAAGAC	3 cut(s)	246, 324, 1874
Bbv12I	GWGCWC	4 cut(s)	79, 508, 1558, 1642
BbvCI	CCTCAGC	3 cut(s)	269, 1215, 1764
BbvI	GCAGC	8 cut(s)	282, 631, 1201, 1335, 1600, 1747, 1842, 1850
BccI	CCATC	3 cut(s)	1538, 1855, 1979
BceAI	ACGGC	2 cut(s)	1521, 1709
BciVI	GTATCC	2 cut(s)	366, 1279
BclI	TGATCA	1 cut(s)	1492
BcnI	CCSGG	4 cut(s)	390, 391, 1738, 2009
BcoDI	GTCTC	2 cut(s)	1387, 1579
BfaI	CTAG	3 cut(s)	258, 435, 1773
BfmI	CTRYAG	4 cut(s)	274, 1797, 1856, 2100
BfrI	CTTAAG	1 cut(s)	206
BfuI	GTATCC	2 cut(s)	366, 1279
BglII	AGATCT	1 cut(s)	1903
BisI	GCNGC	9 cut(s)	296, 645, 1190, 1324, 1589, 1599, 1761, 1839, 1856
BlpI	GCTNAGC	1 cut(s)	894
BlsI	GCNGC	9 cut(s)	297, 646, 1191, 1325, 1590, 1600, 1762, 1840, 1857
BmcAI	AGTACT	1 cut(s)	1395
Bme1390I	CCNGG	4 cut(s)	390, 391, 1738, 2009
Bme18I	GGWCC	1 cut(s)	284
BmeT110I	CYCGRG	2 cut(s)	78, 389
BmgT120I	GGNCC	2 cut(s)	284, 1735
BmiI	GGNNCC	3 cut(s)	783, 1677, 1895
BmrFI	CCNGG	4 cut(s)	390, 391, 1738, 2009
BmsI	GCATC	2 cut(s)	583, 1621
BpiI	GAAGAC	3 cut(s)	246, 324, 1874
BpmI	CTGGAG	1 cut(s)	45
Bpu10I	CCTNAGC	4 cut(s)	87, 269, 1215, 1764
Bpu1102I	GCTNAGC	1 cut(s)	894
BpuEI	CTTGAG	6 cut(s)	826, 1009, 1369, 1404, 1626, 1847
BpuMI	CCSGG	4 cut(s)	390, 391, 1738, 2009
BsaBI	GATNNNNATC	1 cut(s)	1043
BsaI	GGTCTC	1 cut(s)	1387
BsaJI	CCNNGG	5 cut(s)	389, 1803, 1932, 2008, 2022
BsaWI	WCCGGW	1 cut(s)	691
Bsc4I	CCNNNNNNNGG	7 cut(s)	64, 135, 809, 1199, 1216, 1457, 1566
Bse118I	RCCGGY	1 cut(s)	57
Bse1I	ACTGG	2 cut(s)	1391, 1571
Bse3DI	GCAATG	2 cut(s)	241, 286
Bse8I	GATNNNNATC	1 cut(s)	1043
BseDI	CCNNGG	5 cut(s)	389, 1803, 1932, 2008, 2022
BseGI	GGATG	8 cut(s)	144, 508, 574, 1181, 1228, 1549, 1990, 2065
BseJI	GATNNNNATC	1 cut(s)	1043
BseLI	CCNNNNNNNGG	7 cut(s)	64, 135, 809, 1199, 1216, 1457, 1566
BseMI	GCAATG	2 cut(s)	241, 286
BseMII	CTCAG	8 cut(s)	101, 283, 876, 1069, 1206, 1478, 1671, 1755
BseNI	ACTGG	2 cut(s)	1391, 1571
BseRI	GAGGAG	6 cut(s)	792, 929, 1232, 1718, 1781, 2129
BseSI	GKGCMC	2 cut(s)	114, 508
BseXI	GCAGC	8 cut(s)	282, 631, 1201, 1335, 1600, 1747, 1842, 1850
BshFI	GGCC	3 cut(s)	1293, 1570, 1736
BsiHKAI	GWGCWC	4 cut(s)	79, 508, 1558, 1642
BsiHKCI	CYCGRG	2 cut(s)	78, 389
BsiSI	CCGG	5 cut(s)	58, 390, 692, 1738, 2008
BslFI	GGGAC	1 cut(s)	1562
BslI	CCNNNNNNNGG	7 cut(s)	64, 135, 809, 1199, 1216, 1457, 1566
BsmAI	GTCTC	2 cut(s)	1387, 1579
BsmFI	GGGAC	1 cut(s)	1562
BsnI	GGCC	3 cut(s)	1293, 1570, 1736
Bso31I	GGTCTC	1 cut(s)	1387
BsoBI	CYCGRG	2 cut(s)	78, 389
Bsp1286I	GDGCHC	6 cut(s)	79, 114, 508, 1248, 1558, 1642
Bsp1407I	TGTACA	2 cut(s)	703, 2040
Bsp143I	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
Bsp1720I	GCTNAGC	1 cut(s)	894
Bsp19I	CCATGG	1 cut(s)	1932
BspACI	CCGC	5 cut(s)	41, 61, 779, 898, 1599
BspANI	GGCC	3 cut(s)	1293, 1570, 1736
BspCNI	CTCAG	8 cut(s)	100, 282, 877, 1068, 1207, 1477, 1672, 1756
BspHI	TCATGA	1 cut(s)	805
BspLI	GGNNCC	3 cut(s)	783, 1677, 1895
BspMAI	CTGCAG	1 cut(s)	1860
BspPI	GGATC	7 cut(s)	625, 776, 789, 1491, 1670, 1683, 2061
BspTI	CTTAAG	1 cut(s)	206
BspTNI	GGTCTC	1 cut(s)	1387
BsrBI	CCGCTC	1 cut(s)	1601
BsrDI	GCAATG	2 cut(s)	241, 286
BsrFI	RCCGGY	1 cut(s)	57
BsrGI	TGTACA	2 cut(s)	703, 2040
BsrI	ACTGG	2 cut(s)	1391, 1571
BssAI	RCCGGY	1 cut(s)	57
BssECI	CCNNGG	5 cut(s)	389, 1803, 1932, 2008, 2022
BssMI	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
BssT1I	CCWWGG	2 cut(s)	1932, 2022
Bst4CI	ACNGT	5 cut(s)	1364, 1441, 1475, 1553, 1873
Bst6I	CTCTTC	3 cut(s)	2, 206, 1811
BstAFI	CTTAAG	1 cut(s)	206
BstAUI	TGTACA	2 cut(s)	703, 2040
BstC8I	GCNNGC	3 cut(s)	59, 891, 1746
BstDSI	CCRYGG	1 cut(s)	1932
BstENI	CCTNNNNNAGG	3 cut(s)	133, 807, 1214
BstF5I	GGATG	8 cut(s)	144, 508, 574, 1181, 1228, 1549, 1990, 2065
BstKTI	GATC	9 cut(s)	620, 724, 784, 1486, 1495, 1678, 1906, 2056, 2083
BstMAI	GTCTC	2 cut(s)	1387, 1579
BstMBI	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 797, 895, 1299, 1323, 1760, 1769, 1847
BstNSI	RCATGY	1 cut(s)	302
BstSCI	CCNGG	4 cut(s)	388, 389, 1736, 2007
BstSFI	CTRYAG	4 cut(s)	274, 1797, 1856, 2100
BstSLI	GKGCMC	2 cut(s)	114, 508
BstV1I	GCAGC	8 cut(s)	282, 631, 1201, 1335, 1600, 1747, 1842, 1850
BstV2I	GAAGAC	3 cut(s)	246, 324, 1874
BstX2I	RGATCY	4 cut(s)	617, 781, 1675, 1903
BstYI	RGATCY	4 cut(s)	617, 781, 1675, 1903
BsuI	GTATCC	2 cut(s)	366, 1279
BsuRI	GGCC	3 cut(s)	1293, 1570, 1736
BtgI	CCRYGG	1 cut(s)	1932
BtsCI	GGATG	8 cut(s)	144, 508, 574, 1181, 1228, 1549, 1990, 2065
BtsI	GCAGTG	2 cut(s)	252, 438
BtsIMutI	CAGTG	6 cut(s)	252, 438, 1063, 1369, 1480, 1558
Cac8I	GCNNGC	3 cut(s)	59, 891, 1746
CaiI	CAGNNNCTG	1 cut(s)	1796
CciI	TCATGA	1 cut(s)	805
Cfr10I	RCCGGY	1 cut(s)	57
Cfr13I	GGNCC	2 cut(s)	284, 1735
Cfr9I	CCCGGG	1 cut(s)	389
Csp6I	GTAC	6 cut(s)	19, 203, 591, 704, 1394, 2041
CviQI	GTAC	6 cut(s)	19, 203, 591, 704, 1394, 2041
DpnI	GATC	9 cut(s)	619, 723, 783, 1485, 1494, 1677, 1905, 2055, 2082
DpnII	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
DrdI	GACNNNNNNGTC	1 cut(s)	1049
DseDI	GACNNNNNNGTC	1 cut(s)	1049
Eam1104I	CTCTTC	3 cut(s)	2, 206, 1811
EarI	CTCTTC	3 cut(s)	2, 206, 1811
EciI	GGCGGA	1 cut(s)	794
Ecl136II	GAGCTC	1 cut(s)	1640
Eco130I	CCWWGG	2 cut(s)	1932, 2022
Eco24I	GRGCYC	2 cut(s)	1248, 1642
Eco31I	GGTCTC	1 cut(s)	1387
Eco32I	GATATC	1 cut(s)	265
Eco47I	GGWCC	1 cut(s)	284
Eco53kI	GAGCTC	1 cut(s)	1640
Eco57I	CTGAAG	2 cut(s)	597, 1390
Eco88I	CYCGRG	2 cut(s)	78, 389
EcoICRI	GAGCTC	1 cut(s)	1640
EcoNI	CCTNNNNNAGG	3 cut(s)	133, 807, 1214
EcoRI	GAATTC	1 cut(s)	394
EcoRV	GATATC	1 cut(s)	265
EcoT14I	CCWWGG	2 cut(s)	1932, 2022
EcoT38I	GRGCYC	2 cut(s)	1248, 1642
ErhI	CCWWGG	2 cut(s)	1932, 2022
FalI	AAGNNNNNCTT	4 cut(s)	1834, 1866, 2067, 2099
FaqI	GGGAC	1 cut(s)	1562
FauI	CCCGC	2 cut(s)	54, 891
FbaI	TGATCA	1 cut(s)	1492
Fnu4HI	GCNGC	9 cut(s)	296, 645, 1190, 1324, 1589, 1599, 1761, 1839, 1856
FokI	GGATG	8 cut(s)	151, 495, 561, 1168, 1235, 1556, 1997, 2072
FriOI	GRGCYC	2 cut(s)	1248, 1642
Fsp4HI	GCNGC	9 cut(s)	296, 645, 1190, 1324, 1589, 1599, 1761, 1839, 1856
FspBI	CTAG	3 cut(s)	258, 435, 1773
GluI	GCNGC	9 cut(s)	296, 645, 1190, 1324, 1589, 1599, 1761, 1839, 1856
GsuI	CTGGAG	1 cut(s)	45
HaeIII	GGCC	3 cut(s)	1293, 1570, 1736
HapII	CCGG	5 cut(s)	58, 390, 692, 1738, 2008
HincII	GTYRAC	1 cut(s)	909
HindII	GTYRAC	1 cut(s)	909
HpaII	CCGG	5 cut(s)	58, 390, 692, 1738, 2008
HphI	GGTGA	1 cut(s)	1676
Hpy166II	GTNNAC	2 cut(s)	506, 909
Hpy8I	GTNNAC	2 cut(s)	506, 909
Hpy99I	CGWCG	2 cut(s)	486, 1695
HpyAV	CCTTC	8 cut(s)	151, 466, 803, 978, 1193, 1414, 1451, 1907
HpyCH4III	ACNGT	5 cut(s)	1364, 1441, 1475, 1553, 1873
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 797, 895, 1299, 1323, 1760, 1769, 1847
KroI	GCCGGC	1 cut(s)	57
KroNI	GCCGGC	1 cut(s)	59
Ksp22I	TGATCA	1 cut(s)	1492
Kzo9I	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
LmnI	GCTCC	9 cut(s)	184, 805, 1150, 1331, 1561, 1705, 1822, 1933, 1936
Lsp1109I	GCAGC	8 cut(s)	282, 631, 1201, 1335, 1600, 1747, 1842, 1850
LweI	GCATC	2 cut(s)	583, 1621
MaeI	CTAG	3 cut(s)	258, 435, 1773
MaeIII	GTNAC	5 cut(s)	1252, 1358, 1664, 1941, 2015
MalI	GATC	9 cut(s)	619, 723, 783, 1485, 1494, 1677, 1905, 2055, 2082
MbiI	CCGCTC	1 cut(s)	1601
MboI	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
MflI	RGATCY	4 cut(s)	617, 781, 1675, 1903
MhlI	GDGCHC	6 cut(s)	79, 114, 508, 1248, 1558, 1642
MluCI	AATT	8 cut(s)	307, 394, 963, 1177, 1685, 1947, 1975, 2124
MlyI	GAGTC	2 cut(s)	1343, 1880
MmeI	TCCRAC	3 cut(s)	615, 1423, 1461
MroNI	GCCGGC	1 cut(s)	57
MroXI	GAANNNNTTC	2 cut(s)	195, 963
MseI	TTAA	5 cut(s)	207, 516, 542, 1634, 2131
MslI	CAYNNNNRTG	1 cut(s)	863
MspA1I	CMGCKG	1 cut(s)	273
MspCI	CTTAAG	1 cut(s)	206
MspI	CCGG	5 cut(s)	58, 390, 692, 1738, 2008
MspR9I	CCNGG	4 cut(s)	390, 391, 1738, 2009
MwoI	GCNNNNNNNGC	8 cut(s)	83, 797, 895, 1299, 1323, 1760, 1769, 1847
NaeI	GCCGGC	1 cut(s)	59
NciI	CCSGG	4 cut(s)	390, 391, 1738, 2009
NcoI	CCATGG	1 cut(s)	1932
NdeII	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
NgoMIV	GCCGGC	1 cut(s)	57
NlaIV	GGNNCC	3 cut(s)	783, 1677, 1895
NmeAIII	GCCGAG	1 cut(s)	1828
NmuCI	GTSAC	3 cut(s)	1252, 1358, 1664
NspI	RCATGY	1 cut(s)	302
PagI	TCATGA	1 cut(s)	805
PdiI	GCCGGC	1 cut(s)	59
PdmI	GAANNNNTTC	2 cut(s)	195, 963
PkrI	GCNGC	9 cut(s)	297, 646, 1191, 1325, 1590, 1600, 1762, 1840, 1857
PleI	GAGTC	2 cut(s)	1342, 1880
PpsI	GAGTC	2 cut(s)	1342, 1880
Psp124BI	GAGCTC	1 cut(s)	1642
PspN4I	GGNNCC	3 cut(s)	783, 1677, 1895
PspPI	GGNCC	2 cut(s)	284, 1735
PstI	CTGCAG	1 cut(s)	1860
PstNI	CAGNNNCTG	1 cut(s)	1796
PsuI	RGATCY	4 cut(s)	617, 781, 1675, 1903
PvuII	CAGCTG	1 cut(s)	273
RsaI	GTAC	6 cut(s)	20, 204, 592, 705, 1395, 2042
RsaNI	GTAC	6 cut(s)	19, 203, 591, 704, 1394, 2041
RseI	CAYNNNNRTG	1 cut(s)	863
SacI	GAGCTC	1 cut(s)	1642
SaqAI	TTAA	5 cut(s)	207, 516, 542, 1634, 2131
SatI	GCNGC	9 cut(s)	296, 645, 1190, 1324, 1589, 1599, 1761, 1839, 1856
Sau3AI	GATC	9 cut(s)	617, 721, 781, 1483, 1492, 1675, 1903, 2053, 2080
Sau96I	GGNCC	2 cut(s)	284, 1735
ScaI	AGTACT	1 cut(s)	1395
SchI	GAGTC	2 cut(s)	1343, 1880
ScrFI	CCNGG	4 cut(s)	390, 391, 1738, 2009
SduI	GDGCHC	6 cut(s)	79, 114, 508, 1248, 1558, 1642
SfaNI	GCATC	2 cut(s)	583, 1621
SfcI	CTRYAG	4 cut(s)	274, 1797, 1856, 2100
SinI	GGWCC	1 cut(s)	284
SmaI	CCCGGG	1 cut(s)	391
SmiMI	CAYNNNNRTG	1 cut(s)	863
SmlI	CTYRAG	7 cut(s)	206, 841, 988, 1384, 1419, 1641, 1826
SmoI	CTYRAG	7 cut(s)	206, 841, 988, 1384, 1419, 1641, 1826
Sse9I	AATT	8 cut(s)	307, 394, 963, 1177, 1685, 1947, 1975, 2124
SsiI	CCGC	5 cut(s)	41, 61, 779, 898, 1599
SspI	AATATT	1 cut(s)	734
SspMI	CTAG	3 cut(s)	258, 435, 1773
SstI	GAGCTC	1 cut(s)	1642
StyD4I	CCNGG	4 cut(s)	388, 389, 1736, 2007
StyI	CCWWGG	2 cut(s)	1932, 2022
TaaI	ACNGT	5 cut(s)	1364, 1441, 1475, 1553, 1873
TaqI	TCGA	1 cut(s)	98
TaqII	GACCGA	1 cut(s)	403
TasI	AATT	8 cut(s)	307, 394, 963, 1177, 1685, 1947, 1975, 2124
TatI	WGTACW	3 cut(s)	703, 1393, 2040
TauI	GCSGC	1 cut(s)	1601
Tru1I	TTAA	5 cut(s)	207, 516, 542, 1634, 2131
Tru9I	TTAA	5 cut(s)	207, 516, 542, 1634, 2131
TscAI	CASTG	6 cut(s)	252, 445, 1063, 1369, 1480, 1558
TseFI	GTSAC	3 cut(s)	1252, 1358, 1664
TseI	GCWGC	8 cut(s)	295, 644, 1189, 1323, 1588, 1760, 1838, 1855
Tsp45I	GTSAC	3 cut(s)	1252, 1358, 1664
TspDTI	ATGAA	8 cut(s)	182, 473, 822, 888, 1170, 1443, 1974, 2060
TspGWI	ACGGA	3 cut(s)	197, 926, 1828
TspMI	CCCGGG	1 cut(s)	389
TspRI	CASTG	6 cut(s)	252, 445, 1063, 1369, 1480, 1558
Vha464I	CTTAAG	1 cut(s)	206
VneI	GTGCAC	1 cut(s)	504
VpaK11BI	GGWCC	1 cut(s)	284
XagI	CCTNNNNNAGG	3 cut(s)	133, 807, 1214
XapI	RAATTY	3 cut(s)	307, 394, 963
XceI	RCATGY	1 cut(s)	302
XmaI	CCCGGG	1 cut(s)	389
XmnI	GAANNNNTTC	2 cut(s)	195, 963
XspI	CTAG	3 cut(s)	258, 435, 1773
ZrmI	AGTACT	1 cut(s)	1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.